#Sample Identifier	Patient Identifier	Batch Number	Tumor cellularity dominant pathology review	Reviewed gleason	Reviewed Gleason Category	Reviewed Gleason Sum	Clinical Gleason	Clinical Gleason category	Clinical Gleason Sum	Absolute Extract Ploidy	Absolute Genome Doublings	Absolute Extract Purity	CLONET Purity	Average DNA Purity	ISOpure Purity	DeMix Purity	Average RNA Purity	SCNA Cluster	iCluster	MRNA Expression Cluster	Methylation Cluster	RPPA Cluster	MIRNA Cluster	Exon Imbalance Score	ETV1 Status	ETV4 Status	FLI1 Status	SPOP Mutation	FOXA1 mutation	MED12 Mutation	IDH1 Mutation	KMT2A mutation	KMT2C Mutation	KMT2D Mutation	KDM6A mutation	SETD2 Mutation	CHD1 Mutation	TP53 Mutation	PTEN Mutation	PIK3CA Mutation	BRAF mutation	HRAS mutation	CTNNB1 Mutation	AKT1 Mutation	BRCA1 Mutation	BRCA2 Mutation	BRCA1 Germline Mutation	BRCA2 Germline Mutation	ATM Mutation	CDK12 Mutation	FANCC Mutation	FANCD2 Mutation	SPINK1 High	Mutations	Fraction Genome Altered	PTEN CNA	TP53 CNA	CHD1 CNA	BRCA2 CNA	CDKN1B CNA	RB1 CNA	CDK12 CNA	FANCD2 CNA	FAM175A CNA	FANCC CNA	RAD51C CNA	SPOPL CNA	AR Score	AR Protein	AR mRNA	AR V7 Reads	AR V7 Ratio	AR V7 Presence	Cancer Type	Cancer Type Detailed	Oncotree Code
#A unique sample identifier.	Identifier to uniquely specify a patient.	Batch number.	Tumor cellularity dominant pathology review	Reviewed gleason	Reviewed Gleason category	Reviewed Gleason Sum	Clinical Gleason	Clinical Gleason category	Clinical Gleason Sum	Absolute extract ploidy.	Absolute Genome Doublings	Absolute extract purity.	CLONET Purity	Average DNA Purity	ISOpure Purity	DeMix Purity	Average RNA Purity	SCNA Cluster	ICluster.	MRNA expression cluster.	Methylation cluster.	RPPA Cluster.	MICRNA cluster	Exon Imbalance Score	ETV1 Status	ETV4 Status	FLI1 Status	SPOP Mutation	FOXA1 mutation is present	MED12 Mutation is present	IDH1 mutation is present	KMT2A mutation is present	KMT2C Mutation	KMT2D Mutation	KDM6A mutation is present	SETD2 Mutation	CHD1 Mutation is present	TP53 mutation is present.	PTEN Mutation is present	PIK3CA mutation is present.	BRAF mutation	HRAS mutation is present	CTNNB1 Mutation is present	AKT1 Mutation	BRCA1 Mutation is present	BRCA2 Mutation is present	BRCA1 Germline Mutation	BRCA2 Germline Mutation	ATM Mutation	CDK12 Mutation	FANCC Mutation	FANCD2 Mutation	SPINK1 High	Mutations	Fraction Genome Altered	PTEN CNA	TP53 CNA	CHD1 CNA	BRCA2 CNA	CDKN1B CNA	RB1 CNA	CDK12 CNA	FANCD2 CNA	FAM175A CNA	FANCC CNA	RAD51C CNA	SPOPL CNA	AR score	AR Protein	AR mRNA	AR V7 Reads	AR V7 Ratio	AR V7 Presence	Disease type	Cancer Type Detailed	Oncotree Code
#STRING	STRING	STRING	STRING	STRING	STRING	NUMBER	STRING	STRING	NUMBER	NUMBER	STRING	NUMBER	NUMBER	NUMBER	NUMBER	NUMBER	NUMBER	STRING	STRING	STRING	STRING	STRING	STRING	NUMBER	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	NUMBER	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	NUMBER	NUMBER	NUMBER	NUMBER	NUMBER	NUMBER	STRING	NUMBER	NUMBER	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	STRING	NUMBER	NUMBER	NUMBER	NUMBER	NUMBER	NUMBER	STRING	STRING	STRING
#1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1	1
SAMPLE_ID	PATIENT_ID	BATCH_NUMBER	TUMOR_CELLULARITY_PATHOLOGY_REVIEW	REVIEWED_GLEASON	REVIEWED_GLEASON_CATEGORY	REVIEWED_GLEASON_SUM	CLINICAL_GLEASON	CLINICAL_GLEASON_CATEGORY	CLINICAL_GLEASON_SUM	ABSOLUTE_EXTRACT_PLOIDY	ABSOLUTE_GENOME_DOUBLINGS	ABSOLUTE_EXTRACT_PURITY	CLONET_PURITY	AVE_DNA_PURITY	ISOPURE_PURITY	DEMIX_PURITY	AVE_RNA_PURITY	SCNA_CLUSTER	ICLUSTER	MRNA_EXPRESSION_CLUSTER	METHYLATION_CLUSTER	RPPA_CLUSTER	MIRNA_CLUSTER	EXON_IMBALANCE_SCORE	ETV1_STATUS	ETV4_STATUS	FLI1_STATUS	SPOP_MUTATION	FOXA1_MUTATION	MED12_MUTATION	IDH1_MUTATION	KMT2A_MUTATION	KMT2C_MUT	KMT2D_MUTATION	KDM6A_MUTATION	SETD2_MUTATION	CHD1_MUTATION	TP53_MUTATION	PTEN_MUTATION	PIK3CA_MUTATION	BRAF_MUTATION	HRAS_MUTATION	CTNNB1_MUTATION	AKT1_MUTATION	BRCA1_MUTATION	BRCA2_MUTATION	BRCA1_GERMLINE_MUT	BRCA2_GERMLINE_MUT	ATM_MUT	CDK12_MUT	FANCC_MUT	FANCD2_MUT	SPINK1_HIGH	MUTATIONS	FRACTION_GENOME_ALTERED	PTEN_CNA	TP53_CNA	CHD1_CNA	BRCA2_CNA	CDKN1B_CNA	RB1_CNA	CDK12_CNA	FANCD2_CNA	FAM175A_CNA	FANCC_CNA	RAD51C_CNA	SPOPL_CNA	AR_SCORE	AR_PROTEIN	AR_MRNA	AR_V7_READS	AR_V7_RATIO	AR_V7_PRESENCE	CANCER_TYPE	CANCER_TYPE_DETAILED	ONCOTREE_CODE
TCGA-EJ-5502-01	TCGA-EJ-5502	91	41-50%	3+4	3+4	7	4+3	4+3	7	NA	NA	NA	NA	NA	0.28	0.44	0.36	Quiet	3	1	3	1	1	1.29	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	11	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	0.95	-0.3	1021.46	2	1.96	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7209-01	TCGA-HC-7209	184	71-80%	3+4	3+4	7	3+3	3+3	6	1.96	0	0.56	0.58	0.57	0.65	0.62	0.635	Some_SCNA	2	2	3	NA	6	1.46	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22	0.04	homdel	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	2.84	NA	1159.89	2	3.08	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7748-01	TCGA-HC-7748	184	36-45%	3+4	3+4	7	3+3	3+3	6	1.96	0	0.48	0.52	0.5	0.45	0.47	0.46	Some_SCNA	2	3	3	2	6	1.09	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	28	0.05	homdel	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	2.82	0.58	2584.41	4	1.72	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-J4-A83N-01	TCGA-J4-A83N	357	51-60%	3+3	3+3	6	3+4	3+4	7	1.96	0	0.52	0.71	0.615	0.67	0.56	0.615	Some_SCNA	2	1	3	1	2	3.58	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	0.04	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	3.8	-2.01	267.23	1	11.11	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-2A-A8VV-01	TCGA-2A-A8VV	389	31-40%	3+3	3+3	6	3+3	3+3	6	1.99	0	0.84	0.83	0.835	0.65	0.65	0.65	Some_SCNA	2	2	3	1	1	2.96	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	0.06	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	1.94	0.3	215.08	1	12.5	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-2A-A8VT-01	TCGA-2A-A8VT	389	46-55%	4+3	4+3	7	NA	NA	NA	1.92	0	0.72	0.73	0.725	0.78	0.62	0.7	More_SCNA	2	2	3	2	6	1.29	none	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	41	0.8	diploid	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	gain	diploid	-7.5	1.09	2750.37	26	16.35	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5499-01	TCGA-EJ-5499	91	26-35%	3+4	3+4	7	4+3	4+3	7	1.95	0	0.47	0.49	0.48	0.62	0.5	0.56	Some_SCNA	2	3	1	1	1	2.9	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	38	0.05	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-5.27	0.31	543.31	1	2.63	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-FC-7708-01	TCGA-FC-7708	184	31-40%	3+3	3+3	6	4+3	4+3	7	1.96	0	0.36	0.5	0.43	0.39	0.4	0.395	Some_SCNA	3	3	1	3	6	1.5	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	0.05	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	0.04	-0.74	830.78	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KC-A4BV-01	TCGA-KC-A4BV	285	91-100%	4+3	4+3	7	4+5	>=8	9	1.94	0	0.66	0.67	0.665	0.68	0.56	0.62	Some_SCNA	2	2	1	1	3	1.96	none	none	none	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	35	0.14	hetloss	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-6.14	-1.37	473.27	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7321-01	TCGA-EJ-7321	221	81-90%	3+3	3+3	6	3+3	3+3	6	NA	NA	NA	0.72	0.72	0.8	0.64	0.72	Some_SCNA	2	2	1	5	6	1.91	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	35	0.05	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-1.47	-0.14	734.63	1	2.38	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-8469-01	TCGA-EJ-8469	244	66-75%	4+5	>=8	9	4+5	>=8	9	2.11	0	0.76	0.82	0.79	0.87	0.68	0.775	More_SCNA	2	2	1	4	6	1.34	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	36	0.19	homdel	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	10.53	0.97	1291.5	1	3.23	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7077-01	TCGA-HC-7077	161	56-65%	3+4	3+4	7	3+3	3+3	6	1.94	0	0.64	0.91	0.775	0.86	0.66	0.76	Some_SCNA	2	2	1	3	2	1.78	none	fusion	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	63	0.1	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	-2.72	0.32	752.7	1	1.92	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-8257-01	TCGA-HC-8257	221	81-90%	3+4	3+4	7	3+4	3+4	7	1.93	0	0.72	0.75	0.735	0.71	0.64	0.675	Some_SCNA	2	2	1	NA	3	2.41	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	37	0.09	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	1.52	NA	702.92	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-8260-01	TCGA-HC-8260	221	41-50%	3+3	3+3	6	3+4	3+4	7	NA	NA	NA	NA	NA	0.31	0.42	0.365	Quiet	3	3	3	NA	6	2.03	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	6.97	NA	556.99	5	11.63	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-J4-8198-01	TCGA-J4-8198	221	61-70%	3+4	3+4	7	4+3	4+3	7	2.04	0	0.66	0.7	0.68	0.68	0.56	0.62	More_SCNA	2	2	3	4	1	1.39	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	0.08	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-3.22	-0.65	997.85	2	2.63	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KC-A4BN-01	TCGA-KC-A4BN	268	21-30%	3+3	3+3	6	3+4	3+4	7	2	0	0.32	NA	0.32	0.51	0.56	0.535	Quiet	3	3	3	1	6	2.31	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	17	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	7.86	-0.53	540.38	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A6DY-01	TCGA-KK-A6DY	315	31-40%	3+4	3+4	7	3+4	3+4	7	1.93	0	0.44	0.49	0.465	0.61	0.53	0.57	More_SCNA	2	2	1	NA	6	2.32	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	29	0.15	homdel	hetloss	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-6.79	NA	348.44	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A6E2-01	TCGA-KK-A6E2	315	81-90%	3+4	3+4	7	3+4	3+4	7	1.99	0	0.86	0.85	0.855	0.94	0.71	0.825	Some_SCNA	2	2	1	4	4	1.72	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	35	0.02	diploid	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-0.55	1.82	646.14	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A8I5-01	TCGA-KK-A8I5	370	66-75%	3+3	3+3	6	NA	NA	NA	1.99	0	0.85	0.85	0.85	0.72	0.59	0.655	Some_SCNA	2	2	1	3	1	2.36	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	29	0.11	diploid	diploid	diploid	diploid	homdel	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	-2.69	-0.74	273.78	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VP-A875-01	TCGA-VP-A875	357	86-95%	4+3	4+3	7	3+4	3+4	7	1.99	0	0.97	0.99	0.98	0.95	0.74	0.845	More_SCNA	2	2	1	2	3	1.99	none	none	none	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	33	0.68	diploid	diploid	diploid	hetloss	diploid	homdel	diploid	hetloss	diploid	gain	diploid	diploid	11.94	0.75	481.75	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VP-A87C-01	TCGA-VP-A87C	357	76-85%	4+4	>=8	8	4+3	4+3	7	1.93	0	0.4	0.45	0.425	0.36	0.3	0.33	Some_SCNA	3	3	1	NA	6	1.51	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	24	0.07	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-10.12	NA	548.02	2	7.14	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-2A-A8VL-01	TCGA-2A-A8VL	389	31-40%	3+3	3+3	6	3+3	3+3	6	1.97	0	0.5	0.52	0.51	0.29	0.49	0.39	Quiet	3	3	3	1	2	3.85	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	0.03	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	9.17	1.29	297.12	1	7.14	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5739-01	TCGA-CH-5739	91	76-85%	4+3	4+3	7	3+4	3+4	7	2.02	0	0.68	0.7	0.69	0.67	0.55	0.61	Some_SCNA	2	2	3	2	1	1.61	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	1019	0.09	diploid	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	0.71	0.75	1239.67	3	3.8	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5740-01	TCGA-CH-5740	91	86-95%	4+4	>=8	8	3+4	3+4	7	1.95	0	0.67	0.7	0.685	0.75	0.6	0.675	Quiet	2	2	3	2	4	3.25	none	none	none	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	42	0.08	hetloss	diploid	diploid	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	-0.5	0.8	486.88	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5741-01	TCGA-CH-5741	91	91-100%	5+4	>=8	9	4+5	>=8	9	1.94	0	0.81	0.83	0.82	0.69	0.62	0.655	Some_SCNA	2	2	3	5	3	4.19	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	42	0.06	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	4.5	0.8	324.35	2	14.29	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5743-01	TCGA-CH-5743	91	51-60%	4+3	4+3	7	3+4	3+4	7	NA	NA	NA	NA	NA	0	0.23	0.115	Quiet	3	3	4	2	1	2.68	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-14.11	1.07	415.6	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5744-01	TCGA-CH-5744	91	71-80%	4+4	>=8	8	4+3	4+3	7	1.95	0	0.59	0.61	0.6	0.68	0.7	0.69	Some_SCNA	2	2	3	2	1	1.91	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	37	0.05	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	1.51	0.94	783.17	6	8.22	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5746-01	TCGA-CH-5746	91	61-70%	3+3	3+3	6	3+4	3+4	7	1.99	0	0.3	0.41	0.355	0.51	0.53	0.52	Some_SCNA	3	3	3	NA	1	1.99	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	0.01	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	1.95	NA	859.87	2	4	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5752-01	TCGA-CH-5752	91	61-70%	5+4	>=8	9	4+4	>=8	8	1.97	0	0.79	0.79	0.79	0.82	0.74	0.78	Some_SCNA	2	2	1	5	5	1.79	none	none	none	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	60	0.03	diploid	diploid	diploid	diploid	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	3.06	0.91	2359.45	6	3.92	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5754-01	TCGA-CH-5754	91	56-65%	4+4	>=8	8	4+5	>=8	9	1.96	0	0.63	0.66	0.645	0.67	0.43	0.55	More_SCNA	2	2	4	5	5	1.6	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	103	0.23	hetloss	hetloss	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-2.68	0.22	1272.79	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5764-01	TCGA-CH-5764	91	51-60%	3+4	3+4	7	4+3	4+3	7	1.94	0	0.54	0.57	0.555	0.69	0.61	0.65	Some_SCNA	2	3	3	1	5	1.86	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	39	0.06	diploid	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-3.07	-0.96	1306.75	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5765-01	TCGA-CH-5765	91	46-55%	3+4	3+4	7	3+4	3+4	7	1.95	0	0.75	0.76	0.755	0.78	0.68	0.73	Some_SCNA	2	2	1	2	4	2.03	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	37	0.06	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	1.36	0.37	923.37	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5766-01	TCGA-CH-5766	91	61-70%	4+3	4+3	7	4+3	4+3	7	1.93	0	0.55	0.66	0.605	0.54	0.52	0.53	Some_SCNA	3	2	4	2	1	1.8	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	37	0.19	hetloss	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-1.66	-0.05	952.02	2	3.64	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5768-01	TCGA-CH-5768	91	46-55%	3+3	3+3	6	2+4	3+3	6	1.96	0	0.71	0.69	0.7	0.76	0.63	0.695	More_SCNA	2	3	2	2	1	2.02	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	42	0.11	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	0.17	0.43	1004.4	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5769-01	TCGA-CH-5769	91	61-70%	4+5	>=8	9	5+4	>=8	9	1.97	0	0.61	0.64	0.625	0.66	0.52	0.59	Some_SCNA	2	2	3	5	1	2.29	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	74	0.03	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-7.51	-1.27	554.49	1	2.78	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5789-01	TCGA-CH-5789	91	66-75%	4+3	4+3	7	3+4	3+4	7	NA	NA	NA	NA	NA	0.07	0.37	0.22	Quiet	3	3	4	2	1	1.72	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	19	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-0.09	1.06	1067.25	1	1.85	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5790-01	TCGA-CH-5790	91	61-70%	3+4	3+4	7	3+4	3+4	7	1.92	0	0.81	0.81	0.81	0.78	0.64	0.71	Some_SCNA	2	2	3	2	4	1.8	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	33	0.04	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	3.21	0.12	911.74	1	2.78	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5791-01	TCGA-CH-5791	91	66-75%	4+3	4+3	7	3+4	3+4	7	1.92	0	0.66	0.68	0.67	0.78	0.67	0.725	More_SCNA	2	2	3	2	1	2.04	none	none	none	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	41	0.26	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-6.54	0.02	1042.31	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5794-01	TCGA-CH-5794	91	71-80%	4+3	4+3	7	3+4	3+4	7	1.95	0	0.57	0.59	0.58	0.72	0.65	0.685	Some_SCNA	2	2	3	2	1	1.82	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	33	0.05	homdel	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-4.75	-0.01	758.65	2	3.92	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5495-01	TCGA-EJ-5495	91	66-75%	4+5	>=8	9	5+3	>=8	8	2.02	0	0.41	0.4	0.405	0.49	0.42	0.455	More_SCNA	2	3	1	1	1	1.36	none	none	none	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	90	0.13	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-7.26	0.83	1705.81	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5496-01	TCGA-EJ-5496	91	31-40%	3+3	3+3	6	3+4	3+4	7	1.98	0	0.49	0.48	0.485	0.67	0.62	0.645	Some_SCNA	2	3	3	2	1	2	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	45	0.07	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	gain	diploid	diploid	7.56	0.71	1096.26	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5497-01	TCGA-EJ-5497	91	36-45%	3+4	3+4	7	3+4	3+4	7	2.01	0	0.44	0.47	0.455	0.49	0.52	0.505	Quiet	3	3	3	1	1	1.71	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	0.03	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	10.77	0.62	1175.97	1	1.39	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5498-01	TCGA-EJ-5498	91	31-40%	3+4	3+4	7	4+3	4+3	7	1.96	0	0.23	0.24	0.235	0.25	0.3	0.275	Some_SCNA	3	3	3	1	1	1.81	none	none	none	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	49	0.03	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-2.64	-0.61	1330.65	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5503-01	TCGA-EJ-5503	91	71-80%	4+5	>=8	9	5+3	>=8	8	NA	NA	NA	NA	NA	0.11	0.31	0.21	Quiet	3	3	4	3	1	1.47	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	1.71	0	935.87	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5506-01	TCGA-EJ-5506	91	61-70%	4+3	4+3	7	5+3	>=8	8	NA	NA	NA	NA	NA	0.31	0.36	0.335	Quiet	3	3	4	5	1	1.86	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-2.44	0.08	814.74	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5507-01	TCGA-EJ-5507	91	81-90%	4+5	>=8	9	4+5	>=8	9	1.85	0	0.68	0.67	0.675	0.72	0.55	0.635	More_SCNA	3	2	3	5	5	2.5	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	28	0.76	homdel	hetloss	diploid	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	-7.09	-0.42	666.04	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5508-01	TCGA-EJ-5508	91	61-70%	3+4	3+4	7	3+4	3+4	7	1.99	0	0.35	0.36	0.355	0.47	0.46	0.465	Some_SCNA	3	3	3	1	1	1.75	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	45	0.01	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	2.93	1.35	1460.64	1	2.17	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5512-01	TCGA-EJ-5512	91	51-60%	3+3	3+3	6	3+4	3+4	7	1.97	0	0.36	0.41	0.385	0.41	0.4	0.405	Some_SCNA	3	3	3	1	1	3.25	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0.03	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	1.14	0.23	538.81	1	4.55	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5516-01	TCGA-EJ-5516	91	66-75%	4+3	4+3	7	3+4	3+4	7	1.95	0	0.36	0.41	0.385	0.44	0.44	0.44	Some_SCNA	3	3	3	2	1	1.79	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	40	0.05	homdel	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	4.32	0.16	1253.7	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5521-01	TCGA-EJ-5521	91	41-50%	4+4	>=8	8	3+4	3+4	7	1.94	0	0.43	0.59	0.51	0.58	0.58	0.58	More_SCNA	2	2	3	5	1	2.43	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	51	0.15	homdel	hetloss	hetloss	hetloss	diploid	diploid	diploid	homdel	diploid	diploid	hetloss	diploid	-5.74	-1.32	422.27	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5522-01	TCGA-EJ-5522	91	61-70%	3+4	3+4	7	3+4	3+4	7	1.97	0	0.49	0.52	0.505	0.49	0.5	0.495	Some_SCNA	3	3	3	3	1	1.66	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22	0.03	homdel	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	2.89	1.01	1167.24	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5524-01	TCGA-EJ-5524	91	66-75%	4+3	4+3	7	4+5	>=8	9	1.91	0	0.6	0.48	0.54	0.62	0.51	0.565	Some_SCNA	2	3	3	2	1	1.66	none	none	none	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	33	0.12	hetloss	hetloss	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	1.17	0.2	1082.36	2	3.77	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5525-01	TCGA-EJ-5525	91	71-80%	4+5	>=8	9	4+5	>=8	9	2.09	0	0.87	0.86	0.865	0.79	0.63	0.71	More_SCNA	2	2	3	4	4	1.87	none	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	67	0.23	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	2.91	1.45	2177.65	1	1.49	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5526-01	TCGA-EJ-5526	91	71-80%	4+5	>=8	9	4+4	>=8	8	2.02	0	0.49	0.53	0.51	0.52	0.48	0.5	Some_SCNA	2	3	1	3	1	1.89	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	29	0.13	diploid	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	5.68	1.4	1170.67	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5527-01	TCGA-EJ-5527	91	61-70%	4+3	4+3	7	4+3	4+3	7	2	0	0.49	0.53	0.51	0.49	0.44	0.465	More_SCNA	2	3	1	1	1	1.77	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	150	0.16	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-0.83	0.47	1393.32	4	3.23	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5530-01	TCGA-EJ-5530	91	76-85%	3+4	3+4	7	3+4	3+4	7	NA	NA	NA	0.53	0.53	0.74	0.61	0.675	Some_SCNA	2	2	3	3	1	1.24	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	48	0.02	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	4.05	0.72	1824.9	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5542-01	TCGA-EJ-5542	91	61-70%	3+4	3+4	7	3+4	3+4	7	2.03	0	0.58	0.58	0.58	0.56	0.53	0.545	More_SCNA	2	3	3	1	1	1.85	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	46	0.1	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	2.05	0.25	1113.55	1	1.09	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7314-01	TCGA-EJ-7314	184	41-50%	4+3	4+3	7	4+3	4+3	7	2.03	0	0.6	0.61	0.605	0.67	0.56	0.615	More_SCNA	2	3	1	1	1	1.81	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	38	0.1	homdel	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	1.43	-0.46	953.92	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7315-01	TCGA-EJ-7315	184	71-80%	4+3	4+3	7	4+3	4+3	7	1.93	0	0.63	0.66	0.645	0.71	0.51	0.61	Some_SCNA	2	2	1	3	6	2.21	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	24	0.1	homdel	hetloss	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	-7.43	0.33	891.62	6	10.17	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7327-01	TCGA-EJ-7327	184	61-70%	4+3	4+3	7	3+4	3+4	7	1.98	0	0.48	0.48	0.48	0.62	0.51	0.565	Quiet	2	3	3	NA	1	1.16	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	31	0.02	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-4.81	NA	1771.1	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7328-01	TCGA-EJ-7328	184	71-80%	4+3	4+3	7	4+3	4+3	7	1.97	0	0.43	0.45	0.44	0.42	0.37	0.395	Some_SCNA	3	3	1	3	1	2.34	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	32	0.04	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-9.95	-1.13	609.27	2	4.76	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7783-01	TCGA-EJ-7783	184	26-35%	4+4	>=8	8	4+3	4+3	7	1.97	0	0.38	0.43	0.405	0.44	0.47	0.455	Some_SCNA	2	3	1	1	1	1.26	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	35	0.05	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-2.56	1.68	2669.72	1	0.53	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7784-01	TCGA-EJ-7784	184	81-90%	4+3	4+3	7	4+3	4+3	7	4.26	1	0.68	0.85	0.765	0.83	0.66	0.745	More_SCNA	2	2	1	5	4	1.36	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	39	0.33	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	6.08	1.6	1481.44	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7785-01	TCGA-EJ-7785	184	31-40%	3+3	3+3	6	3+4	3+4	7	1.98	0	0.41	0.44	0.425	0.43	0.44	0.435	Some_SCNA	3	3	3	1	1	1.13	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0.02	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	1.23	0.89	1844.85	1	0.67	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7793-01	TCGA-EJ-7793	221	31-40%	3+4	3+4	7	3+4	3+4	7	2	0	0.29	0.36	0.325	0.31	0.48	0.395	Quiet	3	3	3	1	1	1.72	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	12.3	0.32	1029.97	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7797-01	TCGA-EJ-7797	221	41-50%	3+4	3+4	7	3+4	3+4	7	1.98	0	0.36	0.4	0.38	0.58	0.52	0.55	Some_SCNA	3	3	3	1	1	2.05	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	28	0.02	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	4.68	-0.73	745.02	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-8472-01	TCGA-EJ-8472	244	61-70%	4+4	>=8	8	4+4	>=8	8	3.8	1	0.62	0.87	0.745	0.74	0.65	0.695	More_SCNA	2	2	1	NA	1	4.31	none	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	43	0.37	diploid	diploid	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	gain	hetloss	diploid	-3.69	NA	347.28	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A46D-01	TCGA-EJ-A46D	268	51-60%	3+3	3+3	6	3+5	3+5	8	1.96	0	0.2	NA	0.2	0.42	0.44	0.43	Quiet	3	3	3	3	6	2.63	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	0.01	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-3.31	-1.07	300.12	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A65F-01	TCGA-EJ-A65F	315	31-40%	4+3	4+3	7	4+5	>=8	9	2.08	0	0.67	0.67	0.67	0.73	0.64	0.685	More_SCNA	2	2	1	5	5	2.48	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	81	0.17	diploid	diploid	diploid	homdel	hetloss	hetloss	diploid	diploid	diploid	gain	gain	diploid	-0.69	-1.04	816.13	5	11.11	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A7NF-01	TCGA-EJ-A7NF	348	41-50%	3+4	3+4	7	3+4	3+4	7	1.98	0	0.75	0.77	0.76	0.77	0.73	0.75	Some_SCNA	2	3	3	1	4	3.68	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	23	0.05	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	1.35	0.11	252.79	1	8.33	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A7NG-01	TCGA-EJ-A7NG	348	41-50%	3+4	3+4	7	3+4	3+4	7	NA	NA	NA	NA	NA	0.21	0.31	0.26	Quiet	3	3	4	2	1	2.05	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-7.07	0.61	459.82	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A7NK-01	TCGA-EJ-A7NK	357	11-20%	3+3	3+3	6	3+4	3+4	7	NA	NA	NA	NA	NA	0.14	0.33	0.235	Quiet	3	3	4	1	1	2.4	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-3.23	1.65	440.29	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6329-01	TCGA-G9-6329	161	46-55%	3+4	3+4	7	3+4	3+4	7	1.95	0	0.24	0.33	0.285	0.31	0.43	0.37	Some_SCNA	3	3	3	1	1	5.41	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	0.08	diploid	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-8.33	-2.23	141.78	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6336-01	TCGA-G9-6336	108	71-80%	3+3	3+3	6	3+4	3+4	7	2	0	0.23	0.29	0.26	0.28	0.42	0.35	Quiet	3	3	3	NA	1	4.75	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	0.29	NA	206.4	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6342-01	TCGA-G9-6342	161	56-65%	4+3	4+3	7	3+3	3+3	6	1.94	0	0.48	0.58	0.53	0.56	0.59	0.575	Some_SCNA	2	2	3	1	1	3.36	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	266	0.06	homdel	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-6.06	-0.94	340.78	1	4.76	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6351-01	TCGA-G9-6351	161	36-45%	3+3	3+3	6	3+4	3+4	7	1.96	0	0.33	0.35	0.34	0.27	0.49	0.38	Some_SCNA	3	3	3	1	1	4.14	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	298	0.04	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	9.93	-0.83	234.4	2	10	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6353-01	TCGA-G9-6353	161	51-60%	3+3	3+3	6	3+4	3+4	7	NA	NA	NA	NA	NA	0.06	0.34	0.2	Quiet	3	3	4	1	1	3.22	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	2.65	-0.29	420.12	2	7.41	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6356-01	TCGA-G9-6356	108	36-45%	3+4	3+4	7	4+5	>=8	9	2.01	0	0.17	0.39	0.28	0.39	0.37	0.38	Some_SCNA	3	3	3	4	1	3.09	none	fusion	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	0.04	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-10.25	0.4	456.79	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6361-01	TCGA-G9-6361	161	31-40%	3+4	3+4	7	3+4	3+4	7	1.95	0	0.69	0.73	0.71	0.58	0.55	0.565	Some_SCNA	2	2	1	4	1	3.9	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	45	0.11	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-2.93	-0.03	204.35	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6363-01	TCGA-G9-6363	108	31-40%	4+3	4+3	7	4+3	4+3	7	2.02	0	0.47	0.54	0.505	0.5	0.63	0.565	Some_SCNA	2	2	3	4	1	4.6	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	68	0.09	homdel	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	-2.43	0	130.52	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6364-01	TCGA-G9-6364	108	31-40%	3+4	3+4	7	3+4	3+4	7	1.96	0	0.59	0.62	0.605	0.55	0.49	0.52	Some_SCNA	3	2	3	3	1	5.08	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	20	0.04	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-10.11	-2.01	597.7	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6365-01	TCGA-G9-6365	108	36-45%	3+4	3+4	7	3+4	3+4	7	1.99	0	0.53	0.55	0.54	0.4	0.36	0.38	Some_SCNA	3	2	3	4	1	4.44	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	44	0.02	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-10.39	0.17	192.34	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6377-01	TCGA-G9-6377	161	66-75%	3+4	3+4	7	3+4	3+4	7	1.93	0	0.66	0.66	0.66	0.68	0.56	0.62	More_SCNA	2	2	3	4	6	3.14	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	135	0.18	hetloss	hetloss	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	2.27	1.29	294.23	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6384-01	TCGA-G9-6384	108	71-80%	3+4	3+4	7	3+4	3+4	7	1.94	0	0.45	0.46	0.455	0.46	0.44	0.45	Some_SCNA	3	3	3	3	1	1.5	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	19	0.06	diploid	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	4.58	-0.08	1278.74	1	0.93	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6385-01	TCGA-G9-6385	108	41-50%	3+4	3+4	7	3+4	3+4	7	NA	NA	NA	NA	NA	0.18	0.35	0.265	Quiet	3	3	3	NA	1	3.14	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	0.06	NA	460.01	1	2.7	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-7522-01	TCGA-G9-7522	221	51-60%	3+4	3+4	7	3+4	3+4	7	3.99	1	0.46	0.35	0.405	0.34	0.48	0.41	Some_SCNA	3	3	3	3	6	1.9	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0.01	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-0.54	-0.65	567.54	2	3.85	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7081-01	TCGA-HC-7081	161	31-40%	4+3	4+3	7	4+5	>=8	9	1.97	0	0.56	0.58	0.57	0.6	0.5	0.55	Some_SCNA	2	2	2	3	6	1.19	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	382	0.03	homdel	diploid	diploid	diploid	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	-5.96	-1.34	2238.73	2	1.82	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7211-01	TCGA-HC-7211	184	76-85%	4+5	>=8	9	3+4	3+4	7	1.95	0	0.69	0.68	0.685	0.51	0.6	0.555	Some_SCNA	3	3	4	3	2	1.18	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	0.05	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	7.21	1	2911.53	3	1.35	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7212-01	TCGA-HC-7212	184	51-60%	4+4	>=8	8	3+4	3+4	7	NA	NA	NA	0.81	0.81	0.84	0.69	0.765	More_SCNA	2	2	3	5	3	1.31	none	none	none	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	32	0.13	hetloss	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	3.9	0.94	1997.09	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7213-01	TCGA-HC-7213	184	81-90%	4+5	>=8	9	4+5	>=8	9	3.59	1	0.71	0.84	0.775	0.8	0.6	0.7	More_SCNA	3	2	3	5	6	1.99	none	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	34	0.9	homdel	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	hetloss	diploid	-4.25	1.35	498.93	1	2.44	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7230-01	TCGA-HC-7230	184	51-60%	3+3	3+3	6	3+4	3+4	7	1.94	0	0.84	0.85	0.845	0.84	0.68	0.76	Some_SCNA	2	2	3	NA	6	1.6	none	none	none	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	29	0.06	diploid	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	12.58	NA	1260.58	4	4.26	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7231-01	TCGA-HC-7231	184	61-70%	3+4	3+4	7	3+4	3+4	7	1.97	0	0.71	0.78	0.745	0.79	0.59	0.69	Some_SCNA	2	2	3	NA	6	1.74	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	38	0.1	homdel	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	-2.46	NA	900.8	1	1.96	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7232-01	TCGA-HC-7232	184	16-25%	3+4	3+4	7	4+5	>=8	9	1.95	0	0.61	0.58	0.595	0.67	0.61	0.64	Some_SCNA	2	2	1	1	3	1.76	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	33	0.14	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-6.61	-0.65	1004.54	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7744-01	TCGA-HC-7744	184	81-90%	4+5	>=8	9	4+3	4+3	7	1.98	0	0.81	0.82	0.815	0.84	0.67	0.755	Some_SCNA	2	2	3	4	1	1.78	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	34	0.07	hetloss	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	homdel	diploid	1.62	0.27	1426.64	1	1.49	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7747-01	TCGA-HC-7747	184	41-50%	3+4	3+4	7	3+4	3+4	7	1.93	0	0.35	0.41	0.38	0.33	0.34	0.335	Some_SCNA	3	3	3	NA	1	2.94	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	42	0.07	diploid	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	0.93	NA	300	1	9.09	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7818-01	TCGA-HC-7818	184	31-40%	3+3	3+3	6	3+4	3+4	7	NA	NA	NA	NA	NA	0.5	0.51	0.505	Quiet	3	3	4	NA	1	1.62	fusion	none	none	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	27	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	1.04	NA	981.52	1	1.32	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7820-01	TCGA-HC-7820	184	51-60%	3+3	3+3	6	3+4	3+4	7	1.96	0	0.48	0.47	0.475	0.59	0.55	0.57	Some_SCNA	3	3	3	NA	1	2.03	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	33	0.04	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	4.52	NA	841.04	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7821-01	TCGA-HC-7821	184	61-70%	4+5	>=8	9	4+4	>=8	8	1.93	0	0.85	0.84	0.845	0.73	0.56	0.645	More_SCNA	2	2	1	NA	6	1.8	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	25	0.7	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	gain	diploid	diploid	9.01	NA	1410.03	5	5	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-8213-01	TCGA-HC-8213	308	31-40%	3+3	3+3	6	3+3	3+3	6	1.99	0	0.87	0.85	0.86	0.78	0.71	0.745	Quiet	2	2	3	NA	4	3.33	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0.01	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	0.36	NA	318.97	1	4	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-8262-01	TCGA-HC-8262	221	51-60%	3+4	3+4	7	4+4	>=8	8	1.95	0	0.47	0.67	0.57	0.66	0.6	0.63	Some_SCNA	2	3	1	NA	1	2.2	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	36	0.05	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-2.79	NA	598.51	4	7.84	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-A48F-01	TCGA-HC-A48F	268	31-40%	4+3	4+3	7	4+4	>=8	8	1.84	0	0.91	0.9	0.905	0.85	0.72	0.785	More_SCNA	2	2	3	NA	3	2.92	none	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	0.78	hetloss	hetloss	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-8.48	NA	595.02	3	10.34	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-A632-01	TCGA-HC-A632	308	81-90%	4+5	>=8	9	4+5	>=8	9	1.91	0	0.71	0.71	0.71	0.78	0.6	0.69	More_SCNA	2	2	3	NA	4	3.28	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22	0.93	diploid	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	-1.72	NA	192.43	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-A76X-01	TCGA-HC-A76X	348	91-100%	3+3	3+3	6	NA	NA	NA	3.99	1	0.52	0.87	0.695	0.87	0.69	0.78	Quiet	2	2	3	2	2	1.95	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	25	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	5.69	1.22	575.06	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-A8D0-01	TCGA-HC-A8D0	370	6-15%	4+4	>=8	8	NA	NA	NA	1.97	0	0.33	0.54	0.435	0.45	0.47	0.46	Some_SCNA	3	3	3	NA	1	2.55	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0.04	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-11.74	NA	285.8	1	8.33	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-A8D1-01	TCGA-HC-A8D1	370	66-75%	3+4	3+4	7	NA	NA	NA	1.99	0	0.36	0.47	0.415	0.44	0.4	0.42	Quiet	3	3	3	NA	1	1.71	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0.01	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	-4.48	NA	576.85	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HI-7171-01	TCGA-HI-7171	184	41-50%	4+4	>=8	8	5+4	>=8	9	1.91	0	0.88	0.87	0.875	0.84	0.69	0.765	More_SCNA	2	2	3	4	3	3.27	none	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	39	0.6	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	-4.96	-0.66	540.46	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-J4-A67T-01	TCGA-J4-A67T	315	61-70%	3+4	3+4	7	3+4	3+4	7	1.99	0	0.44	0.58	0.51	0.47	0.47	0.47	Quiet	3	3	3	1	2	2.48	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	19	0.01	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	1.34	0.23	391.17	1	6.67	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-J4-A6G1-01	TCGA-J4-A6G1	315	51-60%	4+3	4+3	7	4+4	>=8	8	2	0	0.45	NA	0.45	0.25	0.32	0.285	Quiet	3	3	3	NA	6	3.16	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-7.19	NA	197.76	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-J4-A6M7-01	TCGA-J4-A6M7	320	71-80%	3+3	3+3	6	3+4	3+4	7	2	0	0.77	0.84	0.805	0.73	0.67	0.7	Quiet	2	2	3	4	2	1.92	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	4.39	1.84	493.49	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-J4-A83I-01	TCGA-J4-A83I	370	86-95%	4+3	4+3	7	4+3	4+3	7	1.91	0	0.82	0.81	0.815	0.72	0.57	0.645	Some_SCNA	2	2	1	1	6	1.68	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	0.15	hetloss	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-3.27	0.05	744.7	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-J4-A83K-01	TCGA-J4-A83K	357	61-70%	3+3	3+3	6	3+3	3+3	6	2	0	0.53	0.66	0.595	0.5	0.52	0.51	Quiet	3	3	3	NA	1	1.97	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	24	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-2.5	NA	503.19	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-J9-A52B-01	TCGA-J9-A52B	285	51-60%	4+5	>=8	9	5+4	>=8	9	1.95	0	0.69	0.59	0.64	0.6	0.59	0.595	More_SCNA	2	2	3	NA	3	5.31	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	0.7	diploid	hetloss	diploid	diploid	hetloss	diploid	diploid	homdel	diploid	diploid	diploid	diploid	-11.51	NA	206.92	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-J9-A8CK-01	TCGA-J9-A8CK	357	86-95%	4+3	4+3	7	NA	NA	NA	1.95	0	0.54	0.57	0.555	0.49	0.47	0.48	Some_SCNA	2	2	3	4	6	3.63	none	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	0.06	diploid	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-6.87	-0.56	155.68	1	16.67	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-J9-A8CM-01	TCGA-J9-A8CM	357	86-95%	3+4	3+4	7	NA	NA	NA	2.03	0	0.63	0.64	0.635	0.54	0.53	0.535	More_SCNA	2	2	3	4	6	2.59	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	76	0.15	hetloss	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-9.99	-1.26	267.99	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KC-A4BR-01	TCGA-KC-A4BR	268	41-50%	3+4	3+4	7	NA	NA	NA	NA	NA	NA	NA	NA	0.27	0.29	0.28	Quiet	3	1	3	3	1	2.01	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-2.47	-0.5	429.66	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KC-A7F6-01	TCGA-KC-A7F6	348	41-50%	3+4	3+4	7	NA	NA	NA	1.95	0	0.63	0.68	0.655	0.67	0.59	0.63	Some_SCNA	2	2	1	4	1	3.05	none	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	19	0.08	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	-6.14	0.42	231.89	1	8.33	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A59Y-01	TCGA-KK-A59Y	285	81-90%	4+5	>=8	9	4+5	>=8	9	2	0	0.77	0.76	0.765	0.77	0.67	0.72	Some_SCNA	2	2	3	3	6	4.91	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	0.12	homdel	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	hetloss	diploid	-3.77	-0.56	103.82	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A6E1-01	TCGA-KK-A6E1	315	61-70%	4+5	>=8	9	4+5	>=8	9	3.57	1	0.66	0.81	0.735	0.85	0.68	0.765	More_SCNA	2	2	3	5	3	2.38	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	19	0.87	hetloss	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	-1.27	-0.29	785.84	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A6E6-01	TCGA-KK-A6E6	315	61-70%	4+3	4+3	7	4+5	>=8	9	3.63	1	0.43	0.48	0.455	0.67	0.56	0.615	More_SCNA	2	2	1	NA	NA	3.38	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	43	0.58	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-8.86	NA	242.23	1	11.11	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A7AU-01	TCGA-KK-A7AU	331	51-60%	4+3	4+3	7	NA	NA	NA	2.01	0	0.84	0.88	0.86	0.95	0.74	0.845	Some_SCNA	2	2	3	3	5	3.15	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	19	0.13	homdel	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	gain	diploid	diploid	-1.86	-0.77	400.83	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A7B1-01	TCGA-KK-A7B1	331	51-60%	4+3	4+3	7	4+3	4+3	7	NA	NA	NA	0.57	0.57	0.67	0.6	0.635	Some_SCNA	3	2	3	4	6	2.57	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0.04	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-0.23	-0.35	526.79	11	27.5	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A7B4-01	TCGA-KK-A7B4	331	31-40%	4+5	>=8	9	NA	NA	NA	1.91	0	0.72	0.76	0.74	0.85	0.72	0.785	More_SCNA	2	2	3	5	6	2	none	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	28	0.57	homdel	hetloss	hetloss	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-5.68	2.17	560.09	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A8I4-01	TCGA-KK-A8I4	370	86-95%	4+3	4+3	7	NA	NA	NA	2.36	0	0.4	0.46	0.43	0.48	0.36	0.42	More_SCNA	3	2	3	3	1	2.25	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	25	0.38	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-7.1	-1.23	226.3	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A8I6-01	TCGA-KK-A8I6	370	86-95%	4+3	4+3	7	NA	NA	NA	1.97	0	0.67	0.69	0.68	0.77	0.63	0.7	Some_SCNA	2	2	3	1	1	2.26	none	none	none	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	33	0.12	homdel	diploid	hetloss	diploid	hetloss	hetloss	diploid	hetloss	diploid	diploid	gain	diploid	4.77	-0.22	400.39	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A8I8-01	TCGA-KK-A8I8	370	86-95%	3+4	3+4	7	NA	NA	NA	2.02	0	0.73	0.74	0.735	0.85	0.69	0.77	More_SCNA	2	2	3	5	1	2.51	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0.11	diploid	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-8.55	1.16	473.77	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A8IA-01	TCGA-KK-A8IA	370	86-95%	4+4	>=8	8	NA	NA	NA	1.93	0	0.87	0.87	0.87	0.91	0.73	0.82	More_SCNA	2	2	1	2	6	2.63	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	28	0.58	hetloss	homdel	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	-5.05	0.08	544.43	5	11.9	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A8IC-01	TCGA-KK-A8IC	370	86-95%	4+3	4+3	7	NA	NA	NA	1.88	0	0.36	0.43	0.395	0.53	0.45	0.49	Some_SCNA	3	2	3	5	1	1.47	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	18	0.19	homdel	hetloss	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	2.28	-0.8	583.4	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A8IH-01	TCGA-KK-A8IH	370	66-75%	4+3	4+3	7	NA	NA	NA	1.92	0	0.82	0.81	0.815	0.75	0.56	0.655	More_SCNA	2	2	3	2	6	2.99	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	27	0.19	homdel	hetloss	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-12.26	0.41	196.92	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A8II-01	TCGA-KK-A8II	370	56-65%	3+4	3+4	7	NA	NA	NA	1.95	0	0.94	0.92	0.93	0.87	0.74	0.805	Some_SCNA	2	2	3	2	3	1.76	none	none	none	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	0.18	homdel	hetloss	diploid	diploid	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-0.07	1.85	738.37	3	5.88	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-M7-A720-01	TCGA-M7-A720	331	31-40%	3+3	3+3	6	3+3	3+3	6	NA	NA	NA	NA	NA	0.21	0.34	0.275	Quiet	3	3	4	4	1	2.06	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-2.84	0.7	378.38	1	3.23	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-QU-A6IP-01	TCGA-QU-A6IP	320	61-70%	3+3	3+3	6	3+3	3+3	6	2	0	0.5	0.66	0.58	0.51	0.54	0.525	Quiet	3	3	3	2	2	5.5	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-0.95	1.83	180.22	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-V1-A8WS-01	TCGA-V1-A8WS	389	86-95%	4+3	4+3	7	NA	NA	NA	1.96	0	0.76	0.79	0.775	0.82	0.69	0.755	Some_SCNA	2	2	1	NA	4	1.95	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0.13	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	-5	NA	419.35	1	4	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-V1-A8WW-01	TCGA-V1-A8WW	389	91-100%	4+5	>=8	9	NA	NA	NA	1.99	0	0.83	0.85	0.84	0.72	0.54	0.63	More_SCNA	2	2	3	NA	6	2.34	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	33	0.49	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-8.03	NA	430.45	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VN-A88K-01	TCGA-VN-A88K	357	56-65%	4+4	>=8	8	4+4	>=8	8	1.99	0	0.81	0.83	0.82	0.76	0.59	0.675	Some_SCNA	2	2	4	4	5	2.33	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	27	0.2	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-0.89	-0.24	804.85	2	4.17	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VN-A88L-01	TCGA-VN-A88L	357	76-85%	3+4	3+4	7	3+4	3+4	7	1.96	0	0.63	0.65	0.64	0.62	0.61	0.615	Some_SCNA	2	2	3	3	1	3.07	none	none	none	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	24	0.05	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-3.1	-1.16	163.83	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VN-A88Q-01	TCGA-VN-A88Q	357	66-75%	4+3	4+3	7	4+4	>=8	8	2.01	0	0.62	0.73	0.675	0.81	0.71	0.76	Some_SCNA	2	2	3	NA	5	2.1	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	27	0.06	homdel	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	2.61	NA	417.19	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VP-A872-01	TCGA-VP-A872	357	66-75%	3+4	3+4	7	5+3	>=8	8	1.91	0	0.61	0.63	0.62	0.5	0.44	0.47	More_SCNA	2	2	3	NA	6	3.84	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	18	0.5	homdel	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	hetloss	-12.48	NA	106.69	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VP-A876-01	TCGA-VP-A876	357	91-100%	4+3	4+3	7	3+5	3+5	8	1.96	0	0.89	0.89	0.89	0.85	0.72	0.785	More_SCNA	2	2	3	NA	2	2.49	none	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	23	0.21	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	-3.54	NA	356.71	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VP-A879-01	TCGA-VP-A879	357	56-65%	4+3	4+3	7	4+5	>=8	9	1.99	0	0.47	0.51	0.49	0.42	0.48	0.45	Some_SCNA	3	3	3	NA	1	1.61	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	46	0.01	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-5.68	NA	616.83	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VP-A87D-01	TCGA-VP-A87D	357	91-100%	4+4	>=8	8	4+5	>=8	9	1.96	0	0.77	0.76	0.765	0.81	0.69	0.75	More_SCNA	2	2	3	NA	5	1.66	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	43	0.18	diploid	hetloss	diploid	diploid	hetloss	hetloss	diploid	diploid	diploid	gain	diploid	diploid	2.64	NA	880.57	2	3.77	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VP-A87K-01	TCGA-VP-A87K	357	76-85%	3+4	3+4	7	4+4	>=8	8	1.92	0	0.88	0.89	0.885	0.91	0.74	0.825	More_SCNA	2	2	3	5	3	2.07	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	31	0.4	diploid	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	4.78	2.49	691.92	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-XJ-A9DI-01	TCGA-XJ-A9DI	389	86-95%	5+5	>=8	9	5+4	>=8	9	NA	NA	NA	NA	NA	0.31	0.27	0.29	Quiet	3	3	4	NA	6	2.87	none	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	0	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-14.06	NA	521.27	3	17.65	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-XJ-A9DK-01	TCGA-XJ-A9DK	389	76-85%	4+3	4+3	7	4+4	>=8	8	NA	NA	NA	NA	NA	0.4	0.35	0.375	Quiet	3	3	4	NA	1	2.62	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-8.83	NA	254.24	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-XQ-A8TB-01	TCGA-XQ-A8TB	370	31-40%	3+4	3+4	7	NA	NA	NA	1.93	0	0.99	0.72	0.855	0.69	0.54	0.615	Some_SCNA	2	2	1	NA	1	1.35	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	0.07	homdel	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-4.47	NA	638.29	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8HJ-01	TCGA-YL-A8HJ	370	31-40%	4+3	4+3	7	4+5	>=8	9	1.99	0	0.31	0.41	0.36	0.44	0.35	0.395	Some_SCNA	3	1	3	1	1	1.46	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	23	0.01	diploid	hetloss	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	-6.17	-0.4	610.43	1	3.33	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8HK-01	TCGA-YL-A8HK	370	26-35%	4+4	>=8	8	4+5	>=8	9	1.86	0	0.39	0.44	0.415	0.44	0.47	0.455	Some_SCNA	3	2	3	5	1	1.61	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	19	0.15	homdel	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-5.11	1.85	781.75	1	2.17	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8HL-01	TCGA-YL-A8HL	370	36-45%	4+4	>=8	8	4+5	>=8	9	1.93	0	0.85	0.84	0.845	0.68	0.69	0.685	Some_SCNA	2	2	3	2	3	1.56	none	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0.1	homdel	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-3.24	0.94	1293.38	3	5	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8SA-01	TCGA-YL-A8SA	389	71-80%	4+3	4+3	7	4+4	>=8	8	1.92	0	0.81	0.83	0.82	0.89	0.66	0.775	Some_SCNA	2	2	3	2	4	1.74	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	0.09	homdel	hetloss	hetloss	hetloss	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-9.14	0.77	463.28	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8SF-01	TCGA-YL-A8SF	389	76-85%	4+3	4+3	7	4+4	>=8	8	1.97	0	0.69	0.71	0.7	0.71	0.56	0.635	More_SCNA	2	2	1	4	6	2.3	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0.15	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-9.08	0.2	383.96	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8SL-01	TCGA-YL-A8SL	389	51-60%	4+4	>=8	8	4+4	>=8	8	3.68	1	0.77	NA	0.77	0.94	0.74	0.84	More_SCNA	2	2	1	1	5	2.58	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	43	1	homdel	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	gain	diploid	diploid	-8.05	-1.97	750.88	1	3.45	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8SP-01	TCGA-YL-A8SP	389	76-85%	4+5	>=8	9	4+5	>=8	9	1.94	0	0.87	0.88	0.875	0.83	0.73	0.78	Some_SCNA	2	2	3	4	4	1.6	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	29	0.11	diploid	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	6.91	0.74	1325.43	1	1.39	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-ZG-A8QZ-01	TCGA-ZG-A8QZ	389	51-60%	3+4	3+4	7	4+5	>=8	9	2.02	0	0.36	0.54	0.45	0.54	0.41	0.475	Some_SCNA	3	2	1	3	6	2.33	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	0.1	homdel	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	hetloss	-7.67	-0.31	347.49	1	6.25	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-2A-A8W1-01	TCGA-2A-A8W1	389	91-100%	4+4	>=8	8	4+3	4+3	7	1.96	0	0.93	0.96	0.945	0.9	0.72	0.81	Some_SCNA	1	1	4	5	3	2.05	high	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	18	0.12	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	17.61	-0.44	608.66	1	2.56	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-V1-A8MJ-01	TCGA-V1-A8MJ	370	41-50%	3+3	3+3	6	NA	NA	NA	1.97	0	0.22	0.32	0.27	0.5	0.28	0.39	Some_SCNA	3	3	4	3	1	2.25	fusion	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	19	0.08	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-6.79	-0.3	448.57	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VP-A87J-01	TCGA-VP-A87J	357	56-65%	4+3	4+3	7	3+4	3+4	7	1.93	0	0.83	0.85	0.84	0.72	0.61	0.665	Some_SCNA	2	1	4	2	5	1.77	high	none	none	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	35	0.07	homdel	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	1.93	0.06	1022.08	2	3.92	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-2A-A8W3-01	TCGA-2A-A8W3	389	86-95%	5+4	>=8	9	4+5	>=8	9	1.97	0	0.43	0.48	0.455	0.77	0.57	0.67	Some_SCNA	2	3	1	5	6	1.47	fusion	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	29	0.08	diploid	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	4.3	-0.06	1353.51	1	1.1	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5748-01	TCGA-CH-5748	91	61-70%	3+4	3+4	7	4+3	4+3	7	NA	NA	NA	0.31	0.31	0.61	0.58	0.595	Some_SCNA	1	1	4	2	1	2.1	high	none	none	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	37	0.03	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	11.94	1.05	1176.4	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5750-01	TCGA-CH-5750	91	66-75%	3+4	3+4	7	3+4	3+4	7	1.97	0	0.74	0.76	0.75	0.77	0.6	0.685	Some_SCNA	2	2	2	2	4	2.05	high	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	48	0.01	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	4.32	1.37	1370.88	5	7.35	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5753-01	TCGA-CH-5753	91	81-90%	4+5	>=8	9	4+5	>=8	9	1.93	0	0.83	0.82	0.825	0.71	0.58	0.645	Some_SCNA	2	2	2	1	4	1.69	high	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	41	0.23	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	8.86	0.53	1903.17	1	1.06	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5501-01	TCGA-EJ-5501	91	71-80%	3+4	3+4	7	4+3	4+3	7	1.93	0	0.38	0.42	0.4	0.56	0.51	0.535	Some_SCNA	3	3	4	1	1	1.49	fusion	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	0.07	hetloss	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	-7.94	-0.93	1022.06	2	2.2	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5504-01	TCGA-EJ-5504	91	81-90%	3+4	3+4	7	4+3	4+3	7	1.86	0	0.34	0.72	0.53	0.6	0.49	0.545	Some_SCNA	1	1	2	2	3	2.35	fusion	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	49	0.18	hetloss	diploid	hetloss	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	0.03	0.46	876.76	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5510-01	TCGA-EJ-5510	91	61-70%	4+3	4+3	7	4+3	4+3	7	2	0	0.39	0.41	0.4	0.46	0.45	0.455	Some_SCNA	3	3	4	3	1	1.72	fusion	none	none	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0.11	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-2.7	-0.04	998.14	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5519-01	TCGA-EJ-5519	91	61-70%	4+4	>=8	8	4+4	>=8	8	1.91	0	0.65	0.69	0.67	0.71	0.68	0.695	Some_SCNA	1	3	4	4	5	1.44	high	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	97	0.14	hetloss	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	9.87	-0.07	1567.22	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7318-01	TCGA-EJ-7318	331	31-40%	3+3	3+3	6	4+3	4+3	7	1.97	0	0.62	0.63	0.625	0.5	0.67	0.585	Some_SCNA	1	1	2	4	1	6.03	fusion	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	0.03	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	7.01	1.25	101.86	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7788-01	TCGA-EJ-7788	184	71-80%	4+5	>=8	9	3+4	3+4	7	1.97	0	0.71	0.71	0.71	0.72	0.55	0.635	Some_SCNA	2	1	2	4	6	1.59	fusion	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	36	0.12	homdel	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-0.43	0.29	1177.38	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-8474-01	TCGA-EJ-8474	244	41-50%	3+4	3+4	7	4+4	>=8	8	1.91	0	0.16	0.73	0.445	0.73	0.54	0.635	Some_SCNA	2	2	2	4	2	2.79	fusion	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	39	0.05	diploid	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-2.29	-0.56	341.6	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A7NH-01	TCGA-EJ-A7NH	348	51-60%	3+4	3+4	7	3+4	3+4	7	1.92	0	0.37	0.45	0.41	0.43	0.5	0.465	More_SCNA	3	3	4	5	3	2.07	high	none	none	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0.15	diploid	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	2.22	2.12	666.67	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A8FU-01	TCGA-EJ-A8FU	370	6-15%	4+4	>=8	8	5+3	>=8	8	NA	NA	NA	NA	NA	0.22	0.29	0.255	Quiet	3	3	4	1	1	1.9	high	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-3.04	0.16	392.28	1	3.85	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6348-01	TCGA-G9-6348	108	71-80%	4+3	4+3	7	3+4	3+4	7	1.91	0	0.36	0.41	0.385	0.46	0.38	0.42	Some_SCNA	3	3	2	NA	1	5.27	high	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	36	0.09	hetloss	diploid	diploid	diploid	diploid	hetloss	diploid	hetloss	diploid	hetloss	diploid	diploid	-2.89	NA	131.28	2	28.57	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6494-01	TCGA-G9-6494	108	41-50%	4+3	4+3	7	4+3	4+3	7	1.98	0	0.57	0.63	0.6	0.56	0.61	0.585	Some_SCNA	1	1	2	3	1	2.27	high	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	38	0.12	diploid	hetloss	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	11.6	-0.28	635.62	2	5.71	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-A631-01	TCGA-HC-A631	308	71-80%	3+4	3+4	7	4+5	>=8	9	2	0	0.92	0.92	0.92	0.77	0.59	0.68	More_SCNA	2	2	2	NA	6	3.66	high	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	34	0.36	homdel	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-1.98	NA	353.36	2	11.11	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-A8CY-01	TCGA-HC-A8CY	370	86-95%	4+5	>=8	9	NA	NA	NA	2.08	0	0.83	0.81	0.82	0.9	0.68	0.79	More_SCNA	1	2	2	NA	6	2.17	fusion	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	0.17	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	gain	diploid	diploid	9.59	NA	673.5	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-J4-A83M-01	TCGA-J4-A83M	357	41-50%	3+4	3+4	7	4+3	4+3	7	1.99	0	0.53	0.68	0.605	0.69	0.54	0.615	Quiet	2	1	2	NA	6	2.08	fusion	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	33	0.01	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	-1.59	NA	542.02	2	8.7	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A7AP-01	TCGA-KK-A7AP	348	51-60%	3+4	3+4	7	NA	NA	NA	1.99	0	0.89	0.9	0.895	0.92	0.79	0.855	More_SCNA	1	2	1	4	4	2.34	fusion	none	none	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	0.26	diploid	hetloss	diploid	hetloss	diploid	hetloss	hetloss	diploid	diploid	gain	gain	diploid	-1.18	0.89	526.28	1	3.7	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A7B3-01	TCGA-KK-A7B3	348	91-100%	4+3	4+3	7	NA	NA	NA	3.92	1	0.49	0.69	0.59	0.67	0.56	0.615	Some_SCNA	2	2	1	3	3	3.9	fusion	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	0.15	homdel	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-8.85	-0.29	206.75	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-M7-A71Y-01	TCGA-M7-A71Y	331	41-50%	3+3	3+3	6	3+4	3+4	7	1.95	0	0.17	NA	0.17	0.4	0.37	0.385	Some_SCNA	3	3	4	3	NA	4.54	fusion	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	0.01	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-9.5	-0.52	173.44	1	11.11	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-SU-A7E7-01	TCGA-SU-A7E7	348	36-45%	3+4	3+4	7	NA	NA	NA	1.95	0	0.31	0.49	0.4	0.53	0.48	0.505	Some_SCNA	3	3	4	1	5	1.81	fusion	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	23	0.05	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-5.55	-0.9	815.93	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8SC-01	TCGA-YL-A8SC	389	71-80%	4+4	>=8	8	4+5	>=8	9	1.96	0	0.65	0.66	0.655	0.84	0.6	0.72	More_SCNA	2	2	2	1	6	1.91	fusion	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	30	0.15	diploid	hetloss	diploid	hetloss	hetloss	hetloss	diploid	diploid	diploid	gain	diploid	diploid	-3.67	-2.23	1769.64	1	0.95	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8SJ-01	TCGA-YL-A8SJ	389	66-75%	4+3	4+3	7	4+5	>=8	9	1.97	0	0.64	0.65	0.645	0.55	0.5	0.525	Some_SCNA	3	3	2	1	1	1.83	high	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	0.32	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-7.54	0.82	592.04	1	5	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A9WH-01	TCGA-YL-A9WH	389	51-60%	4+3	4+3	7	4+5	>=8	9	3.09	1	0.74	0.86	0.8	0.8	0.71	0.755	More_SCNA	2	2	2	NA	6	1.94	fusion	none	none	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	50	0.67	hetloss	hetloss	diploid	hetloss	diploid	hetloss	diploid	diploid	hetloss	diploid	hetloss	diploid	-11.8	NA	535.35	2	6.25	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5511-01	TCGA-EJ-5511	91	76-85%	4+3	4+3	7	3+4	3+4	7	1.98	0	0.8	0.8	0.8	0.7	0.56	0.63	Some_SCNA	3	1	4	3	1	1.11	none	fusion	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	52	0.19	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-0.32	-0.45	1389.16	4	3.03	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5762-01	TCGA-CH-5762	91	66-75%	4+3	4+3	7	4+3	4+3	7	2.04	0	0.34	0.38	0.36	0.41	0.38	0.395	More_SCNA	3	3	2	2	1	2.09	none	fusion	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	110	0.15	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-3.7	1.54	1032.81	1	1.96	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5763-01	TCGA-CH-5763	91	66-75%	3+4	3+4	7	3+4	3+4	7	NA	NA	NA	NA	NA	0.19	0.28	0.235	Quiet	3	3	4	2	1	2.14	none	fusion	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	28	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	0.14	0.65	766.09	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5771-01	TCGA-CH-5771	91	51-60%	5+4	>=8	9	4+3	4+3	7	1.91	0	0.27	0.56	0.415	0.29	0.32	0.305	Some_SCNA	3	3	4	1	1	1.75	none	fusion	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	0.04	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-4.57	-1.11	861.28	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A7NM-01	TCGA-EJ-A7NM	348	81-90%	4+3	4+3	7	4+5	>=8	9	1.96	0	0.64	0.68	0.66	0.71	0.56	0.635	Some_SCNA	1	2	2	2	4	2.75	none	high	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	49	0.08	homdel	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-15.03	0.18	254.79	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6371-01	TCGA-G9-6371	108	31-40%	3+3	3+3	6	3+3	3+3	6	2.04	0	0.19	0.35	0.27	0.58	0.6	0.59	More_SCNA	1	1	2	1	1	3.83	none	fusion	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	40	0.07	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	6.31	-0.57	451.84	2	8.7	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7749-01	TCGA-HC-7749	184	81-90%	3+4	3+4	7	4+3	4+3	7	1.97	0	0.7	0.67	0.685	0.72	0.55	0.635	Some_SCNA	2	2	2	NA	6	2.07	none	fusion	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	43	0.12	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	1.82	NA	1596.37	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-A76W-01	TCGA-HC-A76W	348	61-70%	4+3	4+3	7	NA	NA	NA	1.98	0	0.6	0.65	0.625	0.49	0.47	0.48	More_SCNA	2	3	2	NA	5	2.25	none	high	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	35	0.19	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-4.8	NA	549.83	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HI-7168-01	TCGA-HI-7168	184	16-25%	4+4	>=8	8	4+5	>=8	9	3.46	1	0.57	0.58	0.575	0.43	0.39	0.41	More_SCNA	3	3	2	1	1	4.1	none	high	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	52	0.7	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-6.8	-0.65	290.06	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KC-A7FD-01	TCGA-KC-A7FD	348	76-85%	3+3	3+3	6	NA	NA	NA	1.99	0	0.79	0.81	0.8	0.88	0.76	0.82	Some_SCNA	1	1	2	4	4	2.04	none	fusion	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	35	0.02	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	4.85	0.53	516.7	4	14.81	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-M7-A725-01	TCGA-M7-A725	331	71-80%	4+3	4+3	7	4+3	4+3	7	3.97	1	0.72	0.84	0.78	0.81	0.62	0.715	Some_SCNA	1	2	2	5	5	1.68	none	fusion	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	28	0.22	diploid	diploid	diploid	diploid	hetloss	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	2.4	0.19	712.37	1	1.82	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-V1-A8WV-01	TCGA-V1-A8WV	389	86-95%	4+5	>=8	9	NA	NA	NA	3.13	1	0.47	0.57	0.52	0.61	0.58	0.595	More_SCNA	3	2	4	NA	6	3.7	none	high	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	41	0.67	diploid	hetloss	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	gain	diploid	diploid	-17.37	NA	159.03	1	11.11	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-V1-A8X3-01	TCGA-V1-A8X3	389	86-95%	3+4	3+4	7	NA	NA	NA	1.95	0	0.65	0.71	0.68	0.62	0.53	0.575	Some_SCNA	1	1	2	1	1	1.77	none	high	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	0.06	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	6.18	0.76	863.12	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-XQ-A8TA-01	TCGA-XQ-A8TA	370	86-95%	4+4	>=8	8	NA	NA	NA	1.93	0	0.97	0.95	0.96	0.93	0.8	0.865	More_SCNA	1	1	2	NA	4	2.54	none	high	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	120	0.95	homdel	hetloss	hetloss	homdel	diploid	hetloss	hetloss	diploid	diploid	amp	hetloss	diploid	-9.26	NA	4759.26	8	3.19	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-V1-A8WN-01	TCGA-V1-A8WN	389	76-85%	3+3	3+3	6	NA	NA	NA	2	0	0.34	0.5	0.42	0.3	0.42	0.36	Quiet	3	3	4	NA	1	1.52	none	none	high	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	0.01	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	6.85	NA	1013.92	2	3.64	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5738-01	TCGA-CH-5738	91	31-40%	3+3	3+3	6	3+3	3+3	6	2	0	0.44	NA	0.44	0.3	0.38	0.34	Quiet	3	3	3	1	1	1.72	none	none	fusion	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	34	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-2.04	-1.69	902.86	1	1.56	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-H9-7775-01	TCGA-H9-7775	184	91-100%	3+3	3+3	6	3+4	3+4	7	1.97	0	0.79	0.8	0.795	0.66	0.59	0.625	Some_SCNA	2	2	2	3	1	2.07	none	none	fusion	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	29	0.03	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	2.91	-0.5	853.66	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7079-01	TCGA-HC-7079	161	36-45%	5+4	>=8	9	3+4	3+4	7	NA	NA	NA	NA	NA	0	0.18	0.09	Quiet	3	3	3	1	6	1.96	none	none	high	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	24	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-13.3	-2.23	406.1	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A8I9-01	TCGA-KK-A8I9	370	66-75%	4+3	4+3	7	NA	NA	NA	1.94	0	0.52	0.62	0.57	0.55	0.42	0.485	Some_SCNA	1	1	2	NA	1	3.53	none	none	none	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	47	0.14	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-2.01	NA	302.7	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VN-A88O-01	TCGA-VN-A88O	357	66-75%	3+3	3+3	6	3+4	3+4	7	1.94	0	0.33	0.38	0.355	0.54	0.56	0.55	Some_SCNA	1	1	2	NA	2	2.84	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	33	0.06	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	14.45	NA	367.4	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-Y6-A8TL-01	TCGA-Y6-A8TL	389	56-65%	3+3	3+3	6	3+3	3+3	6	1.95	0	0.59	0.62	0.605	0.49	0.56	0.525	Some_SCNA	1	1	2	1	2	2.73	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	27	0.05	diploid	diploid	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	5.26	-0.11	415.87	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A6E0-01	TCGA-KK-A6E0	315	71-80%	4+4	>=8	8	4+5	>=8	9	NA	NA	NA	0.64	0.64	0.71	0.65	0.68	More_SCNA	1	1	2	4	3	3.04	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	23	0.52	homdel	diploid	homdel	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	15.32	-1.48	304.32	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7782-01	TCGA-EJ-7782	184	51-60%	4+5	>=8	9	4+4	>=8	8	1.93	0	0.75	0.76	0.755	0.57	0.6	0.585	Some_SCNA	1	1	2	5	5	1.28	none	none	none	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	286	0.14	diploid	diploid	homdel	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	6.21	1.28	2163.8	3	2.16	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A65E-01	TCGA-EJ-A65E	308	21-30%	3+3	3+3	6	4+3	4+3	7	1.96	0	0.62	0.61	0.615	0.67	0.61	0.64	Some_SCNA	1	1	2	3	2	3.84	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	35	0.04	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	9.96	0.31	278.28	6	60	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-8258-01	TCGA-HC-8258	221	61-70%	3+3	3+3	6	3+3	3+3	6	NA	NA	NA	NA	NA	0.33	0.41	0.37	Quiet	3	3	4	NA	1	1.92	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	10.41	NA	675.93	1	2.04	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-8261-01	TCGA-HC-8261	221	41-50%	4+3	4+3	7	3+4	3+4	7	1.97	0	0.68	NA	0.68	0.56	0.61	0.585	More_SCNA	1	1	2	NA	6	2.31	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	32	0.09	diploid	diploid	homdel	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	5.85	NA	769.72	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A59X-01	TCGA-KK-A59X	308	71-80%	4+4	>=8	8	5+4	>=8	9	1.83	0	0.86	0.87	0.865	0.65	0.63	0.64	More_SCNA	1	1	2	5	6	5.36	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	49	0.98	diploid	diploid	hetloss	diploid	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-1.21	-0.36	221.52	4	33.33	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A59Z-01	TCGA-KK-A59Z	285	41-50%	4+3	4+3	7	4+3	4+3	7	4.2	1	0.79	0.87	0.83	0.53	0.51	0.52	More_SCNA	1	1	2	4	3	3.04	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	44	0.5	diploid	diploid	homdel	diploid	diploid	hetloss	diploid	diploid	diploid	gain	diploid	hetloss	-0.67	-0.57	442.64	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A8IF-01	TCGA-KK-A8IF	370	91-100%	4+4	>=8	8	4+3	4+3	7	2.17	0	0.96	0.96	0.96	0.85	0.73	0.79	More_SCNA	1	1	2	4	4	6.22	none	none	none	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	0.36	diploid	diploid	homdel	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	-0.54	-0.5	366.17	1	7.14	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VN-A88R-01	TCGA-VN-A88R	370	46-55%	4+4	>=8	8	4+4	>=8	8	1.94	0	0.8	0.79	0.795	0.68	0.67	0.675	Some_SCNA	1	1	2	NA	5	5.91	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	28	0.16	diploid	diploid	homdel	hetloss	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	10.39	NA	258.48	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-XJ-A83G-01	TCGA-XJ-A83G	357	91-100%	3+4	3+4	7	4+3	4+3	7	1.9	0	0.54	0.53	0.535	0.51	0.71	0.61	More_SCNA	1	1	2	NA	6	5.17	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	30	0.19	diploid	diploid	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	9.42	NA	147.15	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5788-01	TCGA-CH-5788	91	71-80%	4+5	>=8	9	4+3	4+3	7	2.04	0	0.84	0.85	0.845	0.87	0.77	0.82	More_SCNA	1	1	2	5	4	1.84	none	none	none	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	47	0.28	diploid	diploid	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	homdel	7.23	1.22	1730.88	1	1.96	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5505-01	TCGA-EJ-5505	91	61-70%	3+4	3+4	7	4+3	4+3	7	1.96	0	0.48	0.48	0.48	0.47	0.58	0.525	Some_SCNA	3	1	2	2	2	2.2	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	41	0.04	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	21.68	0.99	1177.14	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5509-01	TCGA-EJ-5509	91	71-80%	3+3	3+3	6	3+4	3+4	7	1.97	0	0.52	0.56	0.54	0.54	0.5	0.52	More_SCNA	1	3	2	2	1	1.48	none	none	none	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	34	0.19	diploid	diploid	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	3.92	0.18	1500.11	1	0.65	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5531-01	TCGA-EJ-5531	91	66-75%	3+4	3+4	7	4+3	4+3	7	1.97	0	0.27	0.43	0.35	0.38	0.44	0.41	More_SCNA	3	3	4	2	1	1.43	none	none	none	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	34	0.05	diploid	diploid	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	2.05	0.12	1406.64	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7115-01	TCGA-EJ-7115	184	11-20%	4+4	>=8	8	4+3	4+3	7	1.94	0	0.58	0.53	0.555	0.49	0.51	0.5	Some_SCNA	1	3	2	1	1	1.87	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	45	0.07	diploid	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	5.53	-1.18	862.68	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7123-01	TCGA-EJ-7123	161	81-90%	3+4	3+4	7	3+4	3+4	7	1.96	0	0.34	0.74	0.54	0.65	0.64	0.645	More_SCNA	1	1	2	NA	6	1.44	none	none	none	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	189	0.19	diploid	diploid	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	14.71	NA	1414.3	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7330-01	TCGA-EJ-7330	184	66-75%	4+4	>=8	8	4+3	4+3	7	1.98	0	0.34	0.4	0.37	0.39	0.42	0.405	More_SCNA	3	3	2	1	1	1.29	none	none	none	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	44	0.22	diploid	diploid	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	4.14	0.27	2584.26	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-8468-01	TCGA-EJ-8468	244	61-70%	4+3	4+3	7	4+4	>=8	8	1.97	0	0.56	0.6	0.58	0.46	0.47	0.465	Some_SCNA	1	1	2	2	6	1.42	none	none	none	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	29	0.09	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	4.34	0.71	1518.52	1	1.89	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A8FS-01	TCGA-EJ-A8FS	357	86-95%	4+3	4+3	7	3+4	3+4	7	1.94	0	0.82	0.82	0.82	0.78	0.67	0.725	Some_SCNA	1	1	2	1	2	2.33	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	37	0.1	diploid	diploid	hetloss	diploid	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	0.04	-0.68	1162.12	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-FC-7961-01	TCGA-FC-7961	308	81-90%	4+5	>=8	9	4+5	>=8	9	3.59	1	0.34	0.51	0.425	0.57	0.5	0.535	More_SCNA	1	1	2	4	6	2.79	none	none	none	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	50	0.39	hetloss	diploid	homdel	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	-2.71	0.78	456.32	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6333-01	TCGA-G9-6333	161	71-80%	4+3	4+3	7	4+3	4+3	7	1.95	0	0.44	0.5	0.47	0.36	0.51	0.435	Some_SCNA	1	1	2	NA	2	5.54	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	63	0.05	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	13.24	NA	174.48	1	11.11	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-7510-01	TCGA-G9-7510	221	61-70%	3+4	3+4	7	4+4	>=8	8	1.95	0	0.23	0.44	0.335	0.39	0.45	0.42	Some_SCNA	3	3	2	4	1	1.99	none	none	none	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	34	0.12	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	1.75	0.12	567.03	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7080-01	TCGA-HC-7080	161	81-90%	4+5	>=8	9	3+4	3+4	7	1.89	0	0.9	0.9	0.9	0.86	0.72	0.79	More_SCNA	1	1	2	NA	3	2.7	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	110	0.59	diploid	diploid	homdel	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	homdel	12.98	NA	714.83	5	11.11	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-J4-A6G3-01	TCGA-J4-A6G3	315	41-50%	4+5	>=8	9	4+4	>=8	8	NA	NA	NA	NA	NA	0.35	0.36	0.355	Quiet	3	3	2	NA	6	2.47	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	23	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-7.43	NA	375.87	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A8IK-01	TCGA-KK-A8IK	370	86-95%	4+4	>=8	8	NA	NA	NA	4.06	1	0.96	0.96	0.96	0.92	0.78	0.85	More_SCNA	1	1	4	NA	4	4.9	none	none	none	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	24	0.62	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	-0.48	NA	247.35	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VP-A878-01	TCGA-VP-A878	357	76-85%	4+5	>=8	9	4+5	>=8	9	1.92	0	0.41	0.45	0.43	0.45	0.49	0.47	Some_SCNA	3	1	2	1	6	2.47	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	31	0.08	diploid	diploid	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	5.91	0.26	344.68	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VP-A87B-01	TCGA-VP-A87B	357	91-100%	4+4	>=8	8	4+4	>=8	8	1.99	0	0.91	0.9	0.905	0.72	0.7	0.71	More_SCNA	1	1	2	NA	4	2.37	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	28	0.16	diploid	diploid	homdel	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	1.81	NA	979.31	1	2.38	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VP-A87H-01	TCGA-VP-A87H	357	56-65%	4+3	4+3	7	4+5	>=8	9	2.33	0	0.58	0.6	0.59	0.69	0.61	0.65	More_SCNA	1	1	2	NA	4	2.1	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	30	0.74	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	gain	diploid	diploid	5.49	NA	522.13	1	4.76	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8HM-01	TCGA-YL-A8HM	370	46-55%	4+4	>=8	8	4+5	>=8	9	NA	NA	NA	0.87	0.87	0.9	0.71	0.805	More_SCNA	1	1	2	5	3	2.67	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	34	0.38	diploid	diploid	homdel	diploid	homdel	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	22.75	0.54	644.01	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8S8-01	TCGA-YL-A8S8	389	91-100%	4+4	>=8	8	4+5	>=8	9	2.3	0	0.61	0.63	0.62	0.74	0.63	0.685	More_SCNA	1	1	2	2	4	1.73	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	34	0.45	diploid	diploid	hetloss	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-0.02	-0.09	1086.53	1	1.67	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8SH-01	TCGA-YL-A8SH	389	71-80%	3+4	3+4	7	4+3	4+3	7	1.93	0	0.68	0.67	0.675	0.58	0.57	0.575	Some_SCNA	1	1	2	1	2	3.25	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	32	0.07	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	3.33	-1.35	281.18	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8SO-01	TCGA-YL-A8SO	389	36-45%	4+3	4+3	7	4+5	>=8	9	2	0	0.55	0.56	0.555	0.72	0.63	0.675	More_SCNA	1	1	2	NA	4	4.18	none	none	none	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	44	0.28	diploid	diploid	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	-6	NA	258.67	2	25	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-ZG-A8QX-01	TCGA-ZG-A8QX	389	66-75%	3+3	3+3	6	3+3	3+3	6	1.95	0	0.52	0.51	0.515	0.43	0.56	0.495	More_SCNA	1	1	2	3	2	3.26	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	0.09	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	-1.41	0.33	252.65	3	37.5	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-ZG-A8QY-01	TCGA-ZG-A8QY	389	46-55%	4+4	>=8	8	5+4	>=8	9	1.88	0	0.55	0.58	0.565	0.6	0.58	0.59	Some_SCNA	1	3	2	5	1	2.38	none	none	none	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	55	0.13	diploid	diploid	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	3.1	-1.33	349.24	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7789-01	TCGA-EJ-7789	184	61-70%	4+5	>=8	9	4+3	4+3	7	2.17	0	0.97	0.94	0.955	0.93	0.71	0.82	More_SCNA	1	1	2	5	4	1.58	none	none	none	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	0.36	diploid	diploid	hetloss	diploid	hetloss	hetloss	diploid	diploid	diploid	gain	diploid	hetloss	6.7	0.57	2364.84	1	0.84	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5737-01	TCGA-CH-5737	91	91-100%	3+4	3+4	7	4+3	4+3	7	1.94	0	0.7	0.82	0.76	0.45	0.54	0.495	Some_SCNA	1	1	2	2	5	2.54	none	none	none	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	102	0.06	hetloss	diploid	hetloss	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	14.8	2.02	848.55	1	1.89	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5494-01	TCGA-EJ-5494	91	76-85%	3+4	3+4	7	4+3	4+3	7	NA	NA	NA	NA	NA	0.58	0.51	0.545	Quiet	1	3	2	4	2	1.6	none	none	none	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	28	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-0.67	0.48	1498.5	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7210-01	TCGA-HC-7210	184	61-70%	4+4	>=8	8	3+4	3+4	7	1.96	0	0.47	0.47	0.47	0.36	0.54	0.45	Some_SCNA	3	3	2	1	3	1.27	none	none	none	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	33	0.07	hetloss	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	15.9	-0.24	1611.61	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-8265-01	TCGA-HC-8265	221	41-50%	3+4	3+4	7	3+5	>=8	8	2.16	0	0.5	0.59	0.545	0.64	0.5	0.57	Some_SCNA	3	3	4	NA	6	3.37	none	none	none	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	68	0.18	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	gain	diploid	diploid	-1.38	NA	417.78	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-J9-A8CP-01	TCGA-J9-A8CP	357	86-95%	3+4	3+4	7	NA	NA	NA	1.93	0	0.6	0.6	0.6	0.58	0.55	0.565	Some_SCNA	1	1	4	3	5	2.73	none	none	none	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	34	0.13	diploid	diploid	homdel	diploid	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	2.63	-0.69	320.19	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A8IB-01	TCGA-KK-A8IB	370	86-95%	4+4	>=8	8	4+5	>=8	9	NA	NA	NA	0.43	0.43	0.62	0.59	0.605	More_SCNA	1	1	2	5	1	4.99	none	none	none	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	45	0.33	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-5.56	-0.98	130.34	1	16.67	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A8IG-01	TCGA-KK-A8IG	370	76-85%	4+4	>=8	8	NA	NA	NA	1.92	0	0.69	0.81	0.75	0.53	0.48	0.505	More_SCNA	1	1	4	NA	1	2.41	none	none	none	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	33	0.24	diploid	diploid	homdel	diploid	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	0.49	NA	469.46	2	7.69	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A9WI-01	TCGA-YL-A9WI	389	76-85%	4+4	>=8	8	4+5	>=8	9	2.27	0	0.88	0.9	0.89	0.88	0.64	0.76	More_SCNA	1	1	2	5	4	2.39	none	none	none	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	41	0.41	diploid	diploid	homdel	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	4.85	0.81	1301.03	10	17.24	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-7523-01	TCGA-G9-7523	221	21-30%	3+4	3+4	7	5+5	>=8	10	1.84	0	0.21	0.29	0.25	0.17	0.18	0.175	More_SCNA	3	1	2	3	1	3.44	none	none	none	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	40	0.17	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-10.23	-0.53	214.62	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5772-01	TCGA-CH-5772	91	71-80%	3+4	3+4	7	4+5	>=8	9	NA	NA	NA	0.84	0.84	0.6	0.56	0.58	Some_SCNA	1	1	2	1	1	3.37	none	none	none	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	74	0.1	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	12.81	-0.36	1044.27	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7125-01	TCGA-EJ-7125	161	61-70%	3+3	3+3	6	3+4	3+4	7	2	0	0.67	0.7	0.685	0.46	0.51	0.485	Some_SCNA	1	1	2	3	2	1.51	none	none	none	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	521	0.06	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	11.64	1.21	1855.32	2	2.33	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7075-01	TCGA-HC-7075	161	81-90%	3+4	3+4	7	3+3	3+3	6	1.99	0	0.78	0.8	0.79	0.68	0.61	0.645	Quiet	1	1	4	NA	2	2	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	54	0.01	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	9.51	NA	943.98	2	2.78	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A8ID-01	TCGA-KK-A8ID	370	86-95%	4+4	>=8	8	NA	NA	NA	NA	NA	NA	0.51	0.51	0.86	0.67	0.765	More_SCNA	1	1	2	5	4	1.75	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	57	0.53	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	7.28	0.96	1066.56	1	1.85	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-XA-A8JR-01	TCGA-XA-A8JR	370	46-55%	3+3	3+3	6	4+3	4+3	7	1.97	0	0.34	0.41	0.375	0.47	0.46	0.465	Some_SCNA	3	1	4	3	1	3.07	none	none	none	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	27	0.03	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	2.54	-1.67	437.03	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YJ-A8SW-01	TCGA-YJ-A8SW	389	91-100%	4+4	>=8	8	NA	NA	NA	NA	NA	NA	0.84	0.84	0.64	0.64	0.64	More_SCNA	1	1	2	1	6	1.31	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	62	0.96	diploid	diploid	diploid	hetloss	diploid	hetloss	hetloss	diploid	diploid	diploid	hetloss	hetloss	12.35	-0.08	1739.93	2	1.79	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-FC-A4JI-01	TCGA-FC-A4JI	268	71-80%	4+5	>=8	9	5+3	>=8	8	3.4	1	0.65	0.72	0.685	0.94	0.78	0.86	More_SCNA	1	1	2	3	4	2.57	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	29	0.66	diploid	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	2.16	-0.58	649.29	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-J4-8200-01	TCGA-J4-8200	308	61-70%	3+4	3+4	7	3+4	3+4	7	2.02	0	0.52	0.55	0.535	0.37	0.47	0.42	Some_SCNA	3	1	4	1	2	2.62	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	25	0.04	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	3.25	-1.26	357.41	1	5.26	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-8470-01	TCGA-EJ-8470	244	<10%	3+3	3+3	6	4+3	4+3	7	1.9	0	0.45	0.48	0.465	0.57	0.43	0.5	Some_SCNA	3	3	2	1	6	2.15	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	27	0.1	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	6.38	-2.23	997.78	1	1.64	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A46I-01	TCGA-EJ-A46I	285	41-50%	3+3	3+3	6	3+4	3+4	7	2	0	0.27	NA	0.27	0.29	0.39	0.34	Quiet	3	3	4	NA	6	2.22	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-0.64	NA	585.97	1	3.57	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6378-01	TCGA-G9-6378	108	71-80%	3+4	3+4	7	3+4	3+4	7	1.95	0	0.26	0.32	0.29	0.31	0.38	0.345	Some_SCNA	3	1	4	4	1	4.93	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	33	0.05	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-9.16	0.57	246	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7737-01	TCGA-HC-7737	184	71-80%	3+4	3+4	7	3+4	3+4	7	1.91	0	0.25	0.4	0.325	0.34	0.37	0.355	Some_SCNA	3	3	4	NA	6	1.77	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	24	0.09	hetloss	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	23.02	NA	645.66	1	3.33	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-8256-01	TCGA-HC-8256	221	51-60%	4+3	4+3	7	3+4	3+4	7	2	0	0.36	0.57	0.465	0.68	0.6	0.64	Some_SCNA	1	1	2	NA	2	2	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	33	0.07	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	3.37	NA	903.06	1	2.08	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-A4ZV-01	TCGA-HC-A4ZV	285	61-70%	4+5	>=8	9	5+4	>=8	9	2.04	0	0.69	0.7	0.695	0.79	0.63	0.71	More_SCNA	1	2	2	NA	6	2.68	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	130	0.36	diploid	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	gain	diploid	diploid	3.49	NA	1582.12	2	4	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KC-A4BL-01	TCGA-KC-A4BL	268	31-40%	3+3	3+3	6	NA	NA	NA	NA	NA	NA	NA	NA	0.25	0.31	0.28	Quiet	3	3	4	5	6	2.19	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-13.84	-0.02	625.53	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A6E5-01	TCGA-KK-A6E5	315	41-50%	3+3	3+3	6	4+3	4+3	7	1.91	0	0.6	0.63	0.615	0.51	0.58	0.545	More_SCNA	1	1	2	NA	4	3.94	none	none	none	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22	0.13	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	1.55	NA	251.67	2	11.76	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A7AV-01	TCGA-KK-A7AV	331	51-60%	3+4	3+4	7	NA	NA	NA	2.03	0	0.3	0.38	0.34	0.52	0.44	0.48	More_SCNA	3	3	2	NA	6	2.9	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	21	0.13	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	0.43	NA	233.56	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-V1-A8MF-01	TCGA-V1-A8MF	370	86-95%	4+4	>=8	8	NA	NA	NA	2.05	0	0.65	0.64	0.645	0.53	0.5	0.515	Some_SCNA	3	3	2	5	2	2.87	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	27	0.09	diploid	hetloss	diploid	hetloss	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-0.53	-2.23	346.93	2	20	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-V1-A8MG-01	TCGA-V1-A8MG	370	36-45%	4+3	4+3	7	NA	NA	NA	2.04	0	1	0.42	0.71	0.59	0.55	0.57	More_SCNA	1	1	2	NA	1	2.74	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	27	0.22	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-2.72	NA	654.21	1	9.09	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-V1-A8ML-01	TCGA-V1-A8ML	389	66-75%	3+4	3+4	7	NA	NA	NA	1.98	0	0.34	0.7	0.52	0.51	0.65	0.58	Some_SCNA	1	1	2	NA	2	3.59	none	none	none	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0.02	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	1.07	NA	262.17	2	15.38	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-V1-A8MU-01	TCGA-V1-A8MU	389	56-65%	4+3	4+3	7	NA	NA	NA	1.95	0	0.47	0.49	0.48	0.39	0.4	0.395	Some_SCNA	3	1	4	3	2	3.3	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	28	0.06	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-6.56	-1.19	175.61	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-V1-A8WL-01	TCGA-V1-A8WL	389	86-95%	3+4	3+4	7	NA	NA	NA	1.96	0	0.7	0.71	0.705	0.45	0.4	0.425	Some_SCNA	3	1	4	3	4	2.99	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0.05	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	3.56	-0.15	270.43	2	16.67	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VP-A87E-01	TCGA-VP-A87E	357	46-55%	3+4	3+4	7	3+3	3+3	6	NA	NA	NA	NA	NA	0.26	0.33	0.295	Quiet	3	1	4	2	2	1.94	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	29	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	4.05	0.09	394.33	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8HO-01	TCGA-YL-A8HO	370	21-30%	3+4	3+4	7	4+3	4+3	7	2.17	0	0.54	0.59	0.565	0.32	0.31	0.315	More_SCNA	3	3	2	3	4	2.26	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	34	0.53	diploid	diploid	hetloss	hetloss	diploid	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	-6.21	-0.04	364.79	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-2A-A8VO-01	TCGA-2A-A8VO	389	66-75%	3+3	3+3	6	3+3	3+3	6	1.98	0	0.55	0.57	0.56	0.53	0.55	0.54	Some_SCNA	1	1	4	1	2	3.79	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	0.02	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	0.69	-0.46	319.02	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5751-01	TCGA-CH-5751	91	71-80%	4+4	>=8	8	5+5	>=8	10	NA	NA	NA	0.38	0.38	0.72	0.61	0.665	More_SCNA	1	2	2	5	NA	1.63	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	0.56	diploid	hetloss	diploid	diploid	diploid	diploid	homdel	diploid	diploid	diploid	diploid	diploid	6.7	1.97	2528.04	23	16.2	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5761-01	TCGA-CH-5761	91	81-90%	5+5	>=8	10	5+4	>=8	9	1.96	0	0.7	0.72	0.71	0.65	0.59	0.62	More_SCNA	1	2	2	5	5	1.45	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	63	0.36	diploid	hetloss	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-0.89	1.23	2868.82	66	36.46	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5767-01	TCGA-CH-5767	108	46-55%	3+3	3+3	6	4+3	4+3	7	1.98	0	0.83	0.84	0.835	0.5	0.6	0.55	Some_SCNA	1	1	2	1	1	2.63	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	39	0.09	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	homdel	26.54	0.04	1008.62	5	8.47	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-CH-5792-01	TCGA-CH-5792	91	71-80%	3+4	3+4	7	4+5	>=8	9	1.91	0	0.38	0.42	0.4	0.36	0.38	0.37	Some_SCNA	3	3	2	5	1	1.62	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	35	0.09	diploid	diploid	hetloss	diploid	homdel	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-4.69	0.42	881.67	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5514-01	TCGA-EJ-5514	91	56-65%	4+3	4+3	7	4+5	>=8	9	NA	NA	NA	0.62	0.62	0.58	0.41	0.495	More_SCNA	1	1	2	5	6	1.7	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	39	0.41	homdel	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-8.8	-2.23	1784.45	4	3.39	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5515-01	TCGA-EJ-5515	91	71-80%	4+3	4+3	7	3+4	3+4	7	NA	NA	NA	NA	NA	0.07	0.36	0.215	Quiet	3	3	4	1	1	2.46	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	13.87	0.5	1057.76	2	2.67	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5517-01	TCGA-EJ-5517	91	81-90%	3+4	3+4	7	3+3	3+3	6	1.97	0	0.72	0.71	0.715	0.38	0.47	0.425	Some_SCNA	3	1	4	1	1	2.81	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	39	0.07	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	9.27	0.48	627.52	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5518-01	TCGA-EJ-5518	91	61-70%	4+5	>=8	9	4+5	>=8	9	1.93	0	0.54	0.58	0.56	0.58	0.44	0.51	Some_SCNA	1	1	2	4	1	1.14	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	46	0.34	diploid	diploid	diploid	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	3.73	-1.02	1906.5	2	0.97	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-5532-01	TCGA-EJ-5532	91	71-80%	3+4	3+4	7	3+4	3+4	7	2.03	0	0.67	0.68	0.675	0.54	0.6	0.57	Some_SCNA	3	1	4	1	1	1.61	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	25	0.08	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	13.54	0.58	1295.4	4	3.92	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7218-01	TCGA-EJ-7218	331	51-60%	3+3	3+3	6	3+4	3+4	7	1.95	0	0.4	0.48	0.44	0.59	0.6	0.595	Some_SCNA	1	1	4	2	2	2.16	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	35	0.06	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	16.14	0.33	583.52	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7317-01	TCGA-EJ-7317	184	51-60%	4+3	4+3	7	3+4	3+4	7	1.98	0	0.69	0.72	0.705	0.38	0.57	0.475	Some_SCNA	1	1	2	1	2	2.16	none	none	none	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	43	0.03	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	18.4	0.64	913.28	1	2.04	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7331-01	TCGA-EJ-7331	184	16-25%	4+3	4+3	7	3+4	3+4	7	1.97	0	0.47	0.47	0.47	0.36	0.45	0.405	Some_SCNA	3	3	4	3	1	1.32	none	none	none	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	35	0.03	diploid	diploid	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	6.79	0.51	2352.2	1	0.63	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7781-01	TCGA-EJ-7781	184	36-45%	3+4	3+4	7	3+4	3+4	7	2	0	0.59	0.57	0.58	0.5	0.51	0.505	More_SCNA	3	3	4	1	1	1.08	none	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	62	0.11	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	2.97	0.74	1898.33	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7786-01	TCGA-EJ-7786	184	61-70%	3+3	3+3	6	3+4	3+4	7	1.96	0	0.55	0.68	0.615	0.37	0.5	0.435	More_SCNA	3	1	4	1	1	1.54	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	37	0.09	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	11.13	0.87	1797.23	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7791-01	TCGA-EJ-7791	184	81-90%	4+3	4+3	7	3+4	3+4	7	NA	NA	NA	NA	NA	0.29	0.34	0.315	Quiet	3	3	4	1	1	1.42	none	none	none	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	25	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	0.74	0.36	1441.87	1	0.83	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7792-01	TCGA-EJ-7792	184	31-40%	3+3	3+3	6	3+4	3+4	7	2.04	0	0.37	0.43	0.4	0.36	0.3	0.33	Some_SCNA	3	1	4	3	1	1.58	none	none	none	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	18	0.03	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	-7.88	0.49	986.26	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-7794-01	TCGA-EJ-7794	184	6-15%	3+4	3+4	7	3+4	3+4	7	1.96	0	0.34	0.38	0.36	0.41	0.42	0.415	Some_SCNA	3	3	4	1	6	1.23	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	17	0.04	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	1.77	-0.69	1613.14	1	1.37	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A46G-01	TCGA-EJ-A46G	285	41-50%	4+3	4+3	7	4+4	>=8	8	NA	NA	NA	0.74	0.74	0.77	0.66	0.715	More_SCNA	2	1	2	5	3	2.25	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	50	0.69	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	gain	diploid	diploid	1.6	-0.07	1100	8	19.51	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A65G-01	TCGA-EJ-A65G	308	81-90%	3+3	3+3	6	3+5	>=8	8	2	0	0.51	NA	0.51	0.43	0.54	0.485	Quiet	3	1	4	NA	2	4.84	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	18.9	NA	230.46	1	16.67	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A65J-01	TCGA-EJ-A65J	315	51-60%	3+4	3+4	7	4+5	>=8	9	2.02	0	0.85	0.84	0.845	0.74	0.66	0.7	Some_SCNA	1	1	2	5	3	2.08	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	38	0.11	homdel	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	12.7	0.12	846.29	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A6RA-01	TCGA-EJ-A6RA	348	41-50%	4+3	4+3	7	4+4	>=8	8	NA	NA	NA	NA	NA	0.29	0.42	0.355	Quiet	3	3	4	2	1	5.42	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-0.95	1.21	128.64	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A6RC-01	TCGA-EJ-A6RC	331	41-50%	3+4	3+4	7	NA	NA	NA	NA	NA	NA	NA	NA	0.31	0.34	0.325	Quiet	3	1	4	1	1	1.99	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	28	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-3.12	0.96	524.47	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A7NJ-01	TCGA-EJ-A7NJ	357	36-45%	4+5	>=8	9	4+4	>=8	8	2	0	0.85	NA	0.85	0.24	0.36	0.3	Quiet	3	3	4	1	6	1.76	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	12	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	8.99	1.03	717.03	1	2.86	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-EJ-A8FN-01	TCGA-EJ-A8FN	357	76-85%	3+3	3+3	6	3+4	3+4	7	2.04	0	0.67	0.7	0.685	0.47	0.51	0.49	More_SCNA	3	1	4	5	2	1.8	none	none	none	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	0.09	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-1.78	0.4	458.29	1	4	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-FC-A5OB-01	TCGA-FC-A5OB	308	81-90%	4+5	>=8	9	4+5	>=8	9	1.97	0	0.86	0.86	0.86	0.58	0.72	0.65	Some_SCNA	1	1	2	4	5	4.01	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	0.03	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	10.22	-0.77	483.99	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-FC-A8O0-01	TCGA-FC-A8O0	389	76-85%	3+3	3+3	6	3+3	3+3	6	NA	NA	NA	NA	NA	0.21	0.35	0.28	Quiet	3	3	3	3	5	3.34	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-13.56	-1.32	276.66	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6366-01	TCGA-G9-6366	184	71-80%	3+4	3+4	7	4+3	4+3	7	2.09	0	0.63	0.64	0.635	0.63	0.62	0.625	Some_SCNA	3	1	4	4	1	3.45	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	37	0.12	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-1.14	-0.93	476.14	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6367-01	TCGA-G9-6367	108	31-40%	4+3	4+3	7	4+5	>=8	9	NA	NA	NA	NA	NA	0	0.24	0.12	Quiet	3	3	4	1	1	3	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	5.7	-0.59	551.31	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6370-01	TCGA-G9-6370	108	16-25%	3+4	3+4	7	3+4	3+4	7	NA	NA	NA	NA	NA	0.03	0.2	0.115	Quiet	3	3	4	1	1	2.08	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-6.32	-2.23	627.3	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-6499-01	TCGA-G9-6499	161	36-45%	3+4	3+4	7	4+5	>=8	9	1.96	0	0.46	0.37	0.415	0.39	0.57	0.48	More_SCNA	3	1	2	3	1	6.4	none	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	58	0.45	diploid	hetloss	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	hetloss	10.38	-1.49	175.91	5	35.71	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-7519-01	TCGA-G9-7519	221	71-80%	3+3	3+3	6	3+4	3+4	7	1.97	0	0.2	0.35	0.275	0.31	0.53	0.42	Some_SCNA	3	1	2	NA	1	5.07	none	none	none	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	0.03	diploid	diploid	diploid	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	4.65	NA	261.53	1	11.11	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-G9-7521-01	TCGA-G9-7521	221	41-50%	3+4	3+4	7	4+4	>=8	8	3.9	1	0.42	0.47	0.445	0.54	0.5	0.52	More_SCNA	3	1	4	4	6	1.72	none	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	30	0.4	hetloss	hetloss	diploid	diploid	hetloss	hetloss	diploid	diploid	diploid	gain	diploid	diploid	5.53	-0.13	1305.12	2	2.13	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7078-01	TCGA-HC-7078	184	81-90%	4+4	>=8	8	3+4	3+4	7	1.96	0	0.73	0.74	0.735	0.56	0.56	0.56	More_SCNA	1	1	2	NA	6	2.58	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	31	0.29	diploid	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	3.65	NA	808.75	2	5	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7233-01	TCGA-HC-7233	184	66-75%	3+5	>=8	8	4+3	4+3	7	2	0	0.55	0.56	0.555	0.52	0.38	0.45	Quiet	3	3	2	3	1	1.38	none	none	none	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	43	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-4.01	-0.61	1268.35	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7736-01	TCGA-HC-7736	184	81-90%	3+3	3+3	6	3+4	3+4	7	1.87	0	0.6	0.6	0.6	0.42	0.38	0.4	Some_SCNA	3	1	2	2	6	1.27	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	25	0.13	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	-1.23	0.33	1241.45	4	3.74	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7740-01	TCGA-HC-7740	184	61-70%	3+4	3+4	7	3+4	3+4	7	NA	NA	NA	NA	NA	0.12	0.27	0.195	Quiet	3	3	4	1	1	1.85	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	20	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-4.09	-1.07	760.14	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7742-01	TCGA-HC-7742	184	71-80%	4+4	>=8	8	3+4	3+4	7	2.01	0	0.56	0.58	0.57	0.55	0.55	0.55	More_SCNA	3	1	4	NA	1	2.03	none	none	none	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	24	0.22	homdel	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-1.45	NA	760.23	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-7750-01	TCGA-HC-7750	184	<10%	3+3	3+3	6	3+4	3+4	7	1.99	0	0.35	0.36	0.355	0.26	0.41	0.335	Quiet	3	1	4	NA	1	2.1	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	29	0.01	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-2.56	NA	638.51	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-8216-01	TCGA-HC-8216	308	61-70%	4+3	4+3	7	4+3	4+3	7	NA	NA	NA	0.58	0.58	0.61	0.54	0.575	More_SCNA	3	1	4	NA	5	3.51	none	none	none	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	122	0.31	diploid	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	7.34	NA	293.98	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-8264-01	TCGA-HC-8264	244	21-30%	3+4	3+4	7	4+5	>=8	9	1.99	0	0.66	0.77	0.715	0.35	0.43	0.39	Some_SCNA	1	1	2	4	2	2.12	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	35	0.07	diploid	diploid	diploid	hetloss	homdel	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	1.84	-1.38	1283.5	1	1.27	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HC-8266-01	TCGA-HC-8266	221	41-50%	4+5	>=8	9	4+4	>=8	8	2	0	0.25	0.37	0.31	0.3	0.31	0.305	More_SCNA	3	3	2	NA	6	2.22	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22	0.32	hetloss	hetloss	hetloss	hetloss	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	-6.59	NA	493.73	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-HI-7170-01	TCGA-HI-7170	184	36-45%	3+3	3+3	6	3+3	3+3	6	1.96	0	0.53	0.55	0.54	0.22	0.24	0.23	Some_SCNA	3	3	4	3	1	2.45	none	none	none	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	34	0.05	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-12.02	-0.25	306.07	2	10	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-J9-A8CL-01	TCGA-J9-A8CL	357	81-90%	3+4	3+4	7	NA	NA	NA	2.05	0	0.75	0.76	0.755	0.7	0.54	0.62	More_SCNA	1	1	2	NA	6	2.39	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	54	0.49	diploid	diploid	diploid	diploid	diploid	diploid	homdel	diploid	diploid	diploid	diploid	diploid	17.56	NA	729.82	3	9.38	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-J9-A8CN-01	TCGA-J9-A8CN	357	66-75%	3+3	3+3	6	NA	NA	NA	1.98	0	0.88	0.88	0.88	0.61	0.67	0.64	More_SCNA	1	1	4	5	2	2.64	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	22	0.13	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	hetloss	16.52	-0.39	466.48	2	11.76	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KC-A7F3-01	TCGA-KC-A7F3	348	41-50%	3+3	3+3	6	NA	NA	NA	1.94	0	0.42	0.6	0.51	0.54	0.55	0.545	Some_SCNA	3	1	4	1	1	2.85	none	none	none	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	37	0.06	diploid	diploid	diploid	hetloss	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	hetloss	3.7	-1.25	275.34	1	6.67	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KC-A7FA-01	TCGA-KC-A7FA	348	61-70%	3+4	3+4	7	NA	NA	NA	1.95	0	0.74	0.76	0.75	0.65	0.63	0.64	More_SCNA	1	1	4	1	1	3.8	none	none	none	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	39	0.6	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-4.78	-0.99	246.41	2	22.22	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KC-A7FE-01	TCGA-KC-A7FE	348	51-60%	3+3	3+3	6	NA	NA	NA	NA	NA	NA	NA	NA	0.26	0.32	0.29	Some_SCNA	3	1	4	1	1	2.48	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0.01	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-6.3	-0.48	381.45	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A8IJ-01	TCGA-KK-A8IJ	357	76-85%	3+3	3+3	6	NA	NA	NA	1.96	0	0.56	0.61	0.585	0.65	0.63	0.64	Some_SCNA	1	1	2	2	2	1.72	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	31	0.04	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	4.23	0.29	675.51	2	4.88	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-KK-A8IL-01	TCGA-KK-A8IL	370	86-95%	3+4	3+4	7	4+5	>=8	9	1.99	0	0.66	0.68	0.67	0.53	0.4	0.465	Quiet	3	3	2	NA	1	2.47	none	none	none	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	34	0.02	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-3.77	NA	252.13	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-M7-A721-01	TCGA-M7-A721	331	51-60%	3+4	3+4	7	3+4	3+4	7	1.87	0	0.23	0.29	0.26	0.49	0.57	0.53	Some_SCNA	1	1	2	1	1	2.02	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	40	0.07	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	5.46	-0.08	524.6	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-TK-A8OK-01	TCGA-TK-A8OK	370	36-45%	5+4	>=8	9	NA	NA	NA	1.96	0	0.52	0.55	0.535	0.16	0.19	0.175	Some_SCNA	3	3	1	1	1	1.9	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	37	0.11	diploid	hetloss	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-14.82	-0.49	551.82	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VN-A88I-01	TCGA-VN-A88I	357	21-30%	4+4	>=8	8	4+4	>=8	8	2	0	0.84	NA	0.84	0.09	0.19	0.14	Quiet	3	1	4	3	1	3.38	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-18.17	-0.7	127.01	1	25	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VN-A88N-01	TCGA-VN-A88N	370	66-75%	4+3	4+3	7	4+3	4+3	7	1.98	0	0.73	0.79	0.76	0.69	0.62	0.655	Some_SCNA	3	1	4	NA	4	3.82	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	21	0.02	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	5.64	NA	158.43	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-VN-A88P-01	TCGA-VN-A88P	357	76-85%	3+4	3+4	7	3+4	3+4	7	1.95	0	0.81	0.8	0.805	0.55	0.54	0.545	More_SCNA	1	1	4	3	2	2.76	none	none	none	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	49	0.18	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-1.15	-0.22	411.32	2	10	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-WW-A8ZI-01	TCGA-WW-A8ZI	389	86-95%	3+4	3+4	7	4+4	>=8	8	1.91	0	0.93	0.93	0.93	0.85	0.73	0.79	Some_SCNA	1	1	2	5	2	2.68	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	31	0.2	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	1.76	0.62	561.2	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-XJ-A83H-01	TCGA-XJ-A83H	357	66-75%	3+3	3+3	6	NA	NA	NA	1.96	0	0.5	0.56	0.53	0.46	0.54	0.5	More_SCNA	1	1	2	NA	2	2.3	none	none	none	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	40	0.17	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	7.45	NA	557.23	1	4.35	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8S9-01	TCGA-YL-A8S9	389	81-90%	4+3	4+3	7	4+5	>=8	9	2.06	0	0.95	0.95	0.95	0.85	0.69	0.77	More_SCNA	1	1	2	5	4	2.07	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	30	0.13	diploid	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	5.51	-0.15	1034.66	1	1.92	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8SB-01	TCGA-YL-A8SB	389	66-75%	4+3	4+3	7	4+5	>=8	9	1.98	0	0.47	0.58	0.525	0.34	0.44	0.39	More_SCNA	3	1	4	NA	2	2.19	none	none	none	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	29	0.21	diploid	hetloss	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	2.57	NA	553.51	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8SK-01	TCGA-YL-A8SK	389	26-35%	3+4	3+4	7	4+5	>=8	9	2.03	0	0.43	0.45	0.44	0.17	0.26	0.215	Some_SCNA	3	3	2	1	1	2.34	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	0.18	diploid	hetloss	diploid	diploid	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	-13.83	-1.26	305.89	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8SQ-01	TCGA-YL-A8SQ	389	61-70%	4+3	4+3	7	4+5	>=8	9	3.52	1	0.64	0.71	0.675	0.71	0.59	0.65	More_SCNA	1	1	2	2	4	2.14	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	34	0.63	diploid	diploid	diploid	hetloss	diploid	hetloss	diploid	hetloss	diploid	gain	diploid	diploid	10.78	-0.26	750	0	0	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A8SR-01	TCGA-YL-A8SR	389	61-70%	4+3	4+3	7	4+5	>=8	9	1.92	0	0.67	0.69	0.68	0.61	0.58	0.595	More_SCNA	1	1	2	3	5	2.36	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	0.27	diploid	diploid	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	10.74	-0.04	521.34	1	4.55	0	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-YL-A9WJ-01	TCGA-YL-A9WJ	389	41-50%	3+3	3+3	6	4+4	>=8	8	1.98	0	0.4	0.44	0.42	0.56	0.48	0.52	Some_SCNA	3	3	4	1	6	1.51	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	28	0.09	diploid	diploid	diploid	hetloss	hetloss	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	0.95	-1.14	933.74	2	3.64	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD
TCGA-ZG-A8QW-01	TCGA-ZG-A8QW	389	66-75%	3+4	3+4	7	4+5	>=8	9	1.96	0	0.37	0.45	0.41	0.52	0.41	0.465	Some_SCNA	3	1	2	2	6	3.26	none	none	none	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	31	0.01	hetloss	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	diploid	-9.71	-0.52	186.32	4	100	1	Prostate Cancer	Prostate Adenocarcinoma	PRAD