Hugo_Symbol Entrez_Gene_Id Center NCBI_Build Chromosome Start_Position End_Position Strand Variant_Classification Variant_Type Reference_Allele Tumor_Seq_Allele1 Tumor_Seq_Allele2 dbSNP_RS dbSNP_Val_Status Tumor_Sample_Barcode Matched_Norm_Sample_Barcode Match_Norm_Seq_Allele1 Match_Norm_Seq_Allele2 Tumor_Validation_Allele1 Tumor_Validation_Allele2 Match_Norm_Validation_Allele1 Match_Norm_Validation_Allele2 Verification_Status Validation_Status Mutation_Status Sequencing_Phase Sequence_Source Validation_Method Score BAM_File Sequencer MA:FImpact MA:FIS MA:protein.change MA:link.MSA MA:link.PDB MA:link.var t_alt_count t_ref_count PERM1 84808 CPCGene hg19 1 914786 914786 + Missense_Mutation SNP C T CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 AGRN 375790 CPCGene hg19 1 970664 970664 + Missense_Mutation SNP C G CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 DVL1 1855 broad.mit.edu hg19 1 1271546 1271546 + Missense_Mutation SNP G A TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx ANKRD65 441869 CPCGene hg19 1 1355723 1355723 + Missense_Mutation SNP C T CPCG0366-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRKCZ 5590 EMBL hg19 1 2075691 2075691 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 SKI 6497 broad.mit.edu hg19 1 2235368 2235368 + Missense_Mutation SNP C T PR-STID0000002872 Unknown Somatic WGS Illumina GAIIx PLCH2 9651 broad.mit.edu hg19 1 2411659 2411659 + Missense_Mutation SNP G T TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx PLCH2 9651 broad.mit.edu hg19 1 2415902 2415902 + Missense_Mutation SNP G A TCGA-CH-5790-01 Unknown Somatic WXS Illumina GAIIx PANK4 55229 broad.mit.edu hg19 1 2441358 2441358 + Missense_Mutation SNP T C TCGA-EJ-7327-01 Unknown Somatic WXS Illumina GAIIx MMEL1 79258 broad.mit.edu hg19 1 2528045 2528045 + Missense_Mutation SNP G A PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx ACTRT2 140625 broad.mit.edu hg19 1 2938993 2938993 + Missense_Mutation SNP A G PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx PRDM16 63976 CPCGene hg19 1 3328012 3328012 + Missense_Mutation SNP C T CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRDM16 63976 broad.mit.edu hg19 1 3328642 3328642 + Missense_Mutation SNP C T TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx CCDC27 148870 broad.mit.edu hg19 1 3680334 3680334 + Missense_Mutation SNP G A PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx LRRC47 57470 broad.mit.edu hg19 1 3697704 3697704 + Missense_Mutation SNP G C TCGA-G9-6384-01 Unknown Somatic WXS Illumina GAIIx CEP104 9731 broad.mit.edu hg19 1 3756209 3756209 + Missense_Mutation SNP G A TCGA-HC-A6AO-01 Unknown Somatic WXS Illumina GAIIx NPHP4 261734 broad.mit.edu hg19 1 5964711 5964711 + Missense_Mutation SNP G A TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx RNF207 388591 broad.mit.edu hg19 1 6270283 6270283 + Missense_Mutation SNP C G TCGA-EJ-7792-01 Unknown Somatic WXS Illumina GAIIx ZBTB48 3104 broad.mit.edu hg19 1 6648255 6648255 + Missense_Mutation SNP A T TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx KLHL21 9903 broad.mit.edu hg19 1 6653694 6653694 + Missense_Mutation SNP C T PR-2762-Tumor Unknown Somatic WXS Illumina GAIIx KLHL21 9903 CPCGene hg19 1 6662098 6662098 + Missense_Mutation SNP G T CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC45A1 50651 broad.mit.edu hg19 1 8390489 8390489 + Missense_Mutation SNP G A PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx RERE 473 broad.mit.edu hg19 1 8418294 8418294 + Missense_Mutation SNP G A TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx RERE 473 CPCGene hg19 1 8418575 8418575 + Missense_Mutation SNP G C CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 CA6 765 broad.mit.edu hg19 1 9009374 9009374 + Missense_Mutation SNP C A P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx GPR157 80045 broad.mit.edu hg19 1 9171452 9171452 + Missense_Mutation SNP G A TCGA-EJ-5530-01 Unknown Somatic WXS Illumina GAIIx SLC25A33 84275 broad.mit.edu hg19 1 9642414 9642414 + Missense_Mutation SNP C T PR-2762-Tumor Unknown Somatic WXS Illumina GAIIx UBE4B 10277 EMBL hg19 1 10166589 10166589 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 KIF1B 23095 CPCGene hg19 1 10327567 10327567 + Missense_Mutation SNP A G CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIF1B 23095 broad.mit.edu hg19 1 10356652 10356652 + Missense_Mutation SNP T G P04-2740-Tumor Unknown Somatic WXS Illumina GAIIx KIF1B 23095 broad.mit.edu hg19 1 10380118 10380118 + Missense_Mutation SNP G A TCGA-H9-A6BX-01 Unknown Somatic WXS Illumina GAIIx CASZ1 54897 CPCGene hg19 1 10699678 10699678 + Missense_Mutation SNP C T CPCG0348-F1 Unknown Somatic WXS Illumina HiSeq 2500 CASZ1 54897 CPCGene hg19 1 10705015 10705015 + Missense_Mutation SNP C G CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 CASZ1 54897 CPCGene hg19 1 10708077 10708077 + Missense_Mutation SNP G A CPCG0081-F1 Unknown Somatic WXS Illumina HiSeq 2500 CASZ1 54897 broad.mit.edu hg19 1 10715842 10715842 + Missense_Mutation SNP C T PR-07-4610 Unknown Somatic WGS Illumina GAIIx UBIAD1 29914 broad.mit.edu hg19 1 11345902 11345902 + Missense_Mutation SNP G A PR-02-1736-Tumor Unknown Somatic WXS Illumina GAIIx PTCHD2 0 broad.mit.edu hg19 1 11576180 11576180 + Missense_Mutation SNP A G TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx PTCHD2 0 broad.mit.edu hg19 1 11580825 11580825 + Missense_Mutation SNP G A PR-05-839-Tumor Unknown Somatic WXS Illumina GAIIx PTCHD2 0 broad.mit.edu hg19 1 11594593 11594593 + Missense_Mutation SNP C T P08-1541 Unknown Somatic WGS Illumina GAIIx PTCHD2 0 broad.mit.edu hg19 1 11595673 11595673 + Missense_Mutation SNP G C PR-04-1243 Unknown Somatic WGS Illumina GAIIx CLCN6 1185 broad.mit.edu hg19 1 11887217 11887217 + Missense_Mutation SNP G T PR-00-1823-Tumor Unknown Somatic WXS Illumina GAIIx NPPB 4879 broad.mit.edu hg19 1 11918519 11918519 + Missense_Mutation SNP C T PR-03-3125 Unknown Somatic WGS Illumina GAIIx MFN2 9927 broad.mit.edu hg19 1 12052706 12052706 + Missense_Mutation SNP G A TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx TNFRSF8 943 broad.mit.edu hg19 1 12170181 12170181 + Missense_Mutation SNP G A TCGA-2A-A8VL-01 Unknown Somatic WXS Illumina GAIIx VPS13D 55187 broad.mit.edu hg19 1 12331156 12331156 + Missense_Mutation SNP A G TCGA-HC-7212-01 Unknown Somatic WXS Illumina GAIIx VPS13D 55187 broad.mit.edu hg19 1 12333082 12333082 + Missense_Mutation SNP T A TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx VPS13D 55187 CPCGene hg19 1 12416462 12416462 + Missense_Mutation SNP A C CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 VPS13D 55187 broad.mit.edu hg19 1 12566941 12566941 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx HNRNPCL2 440563 broad.mit.edu hg19 1 13183439 13183439 + Missense_Mutation SNP T C TCGA-HC-A6AP-01 Unknown Somatic WXS Illumina GAIIx PDPN 10630 CPCGene hg19 1 13936975 13936975 + Missense_Mutation SNP G A CPCG0265-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRDM2 7799 CPCGene hg19 1 14106592 14106592 + Missense_Mutation SNP C T CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMEM51 55092 CPCGene hg19 1 15545982 15545982 + Missense_Mutation SNP G T CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 DNAJC16 23341 broad.mit.edu hg19 1 15892459 15892459 + Missense_Mutation SNP C G TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx RSC1A1 6248 broad.mit.edu hg19 1 15987657 15987657 + Missense_Mutation SNP A G TCGA-EJ-7315-01 Unknown Somatic WXS Illumina GAIIx FBLIM1 54751 broad.mit.edu hg19 1 16091554 16091554 + Missense_Mutation SNP G C TCGA-EJ-5542-01 Unknown Somatic WXS Illumina GAIIx SPEN 23013 broad.mit.edu hg19 1 16257094 16257094 + Missense_Mutation SNP C T TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx SPEN 23013 broad.mit.edu hg19 1 16262301 16262301 + Missense_Mutation SNP A G TCGA-HC-7740-01 Unknown Somatic WGS Illumina GAIIx NBPF1 55672 broad.mit.edu hg19 1 16891365 16891365 + Missense_Mutation SNP G A PR-06-1749 Unknown Somatic WGS Illumina GAIIx NBPF1 55672 broad.mit.edu hg19 1 16891365 16891365 + Missense_Mutation SNP G A PR-08-4154 Unknown Somatic WGS Illumina GAIIx NBPF1 55672 broad.mit.edu hg19 1 16891365 16891365 + Missense_Mutation SNP G A PR-03-728 Unknown Somatic WGS Illumina GAIIx NBPF1 55672 broad.mit.edu hg19 1 16891365 16891365 + Missense_Mutation SNP G T PR-08-4154 Unknown Somatic WGS Illumina GAIIx NBPF1 55672 broad.mit.edu hg19 1 16893822 16893822 + Missense_Mutation SNP C T PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx CROCC 9696 CPCGene hg19 1 17281353 17281353 + Missense_Mutation SNP G A CPCG0334-F1 Unknown Somatic WXS Illumina HiSeq 2500 PADI3 51702 broad.mit.edu hg19 1 17586185 17586185 + Missense_Mutation SNP C T P07-144 Unknown Somatic WGS Illumina GAIIx PADI3 51702 broad.mit.edu hg19 1 17594365 17594365 + Missense_Mutation SNP C T TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx ACTL8 81569 broad.mit.edu hg19 1 18152553 18152553 + Missense_Mutation SNP G A TCGA-VN-A88O-01 Unknown Somatic WXS Illumina GAIIx IGSF21 84966 broad.mit.edu hg19 1 18704791 18704791 + Missense_Mutation SNP G A PR-STID0000003127 Unknown Somatic WGS Illumina GAIIx KLHDC7A 127707 broad.mit.edu hg19 1 18809360 18809360 + Missense_Mutation SNP G A TCGA-HC-7736-01 Unknown Somatic WXS Illumina GAIIx UBR4 23352 broad.mit.edu hg19 1 19480294 19480294 + Missense_Mutation SNP G A TCGA-J4-A83M-01 Unknown Somatic WXS Illumina GAIIx EMC1 23065 broad.mit.edu hg19 1 19557342 19557342 + Missense_Mutation SNP C T TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx VWA5B1 127731 broad.mit.edu hg19 1 20640980 20640980 + Missense_Mutation SNP C T PR-STID0000002872 Unknown Somatic WGS Illumina GAIIx ECE1 1889 CPCGene hg19 1 21582487 21582487 + Missense_Mutation SNP G A CPCG0090-F1 Unknown Somatic WXS Illumina HiSeq 2500 USP48 84196 broad.mit.edu hg19 1 22050463 22050463 + Missense_Mutation SNP T C P07-144 Unknown Somatic WGS Illumina GAIIx HSPG2 3339 CPCGene hg19 1 22213985 22213985 + Missense_Mutation SNP G A CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 HSPG2 3339 broad.mit.edu hg19 1 22222780 22222780 + Missense_Mutation SNP G A PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx EPHA8 2046 broad.mit.edu hg19 1 22913011 22913011 + Missense_Mutation SNP C A PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx EPHB2 2048 broad.mit.edu hg19 1 23191382 23191382 + Missense_Mutation SNP C T PR-STID0000003127 Unknown Somatic WGS Illumina GAIIx KDM1A 23028 broad.mit.edu hg19 1 23397805 23397805 + Missense_Mutation SNP G A PR-3043 Unknown Somatic WGS Illumina GAIIx KDM1A 23028 broad.mit.edu hg19 1 23408731 23408731 + Missense_Mutation SNP T G P05-3852 Unknown Somatic WGS Illumina GAIIx LUZP1 7798 broad.mit.edu hg19 1 23419974 23419974 + Missense_Mutation SNP G T TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx HTR1D 3352 broad.mit.edu hg19 1 23520453 23520453 + Missense_Mutation SNP A G TCGA-HC-8261-01 Unknown Somatic WXS Illumina GAIIx TCEA3 6920 CPCGene hg19 1 23724077 23724077 + Missense_Mutation SNP C A CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 TCEA3 6920 CPCGene hg19 1 23744456 23744456 + Missense_Mutation SNP G A CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 ASAP3 55616 CPCGene hg19 1 23760793 23760793 + Missense_Mutation SNP G A CPCG0241-F1 Unknown Somatic WXS Illumina HiSeq 2500 RPL11 6135 CPCGene hg19 1 24019220 24019220 + Missense_Mutation SNP T A CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 HMGCL 3155 broad.mit.edu hg19 1 24137263 24137263 + Missense_Mutation SNP G A PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx MYOM3 127294 CPCGene hg19 1 24435050 24435050 + Missense_Mutation SNP T C CPCG0269-F1 Unknown Somatic WXS Illumina HiSeq 2500 GRHL3 57822 broad.mit.edu hg19 1 24664560 24664560 + Missense_Mutation SNP C A PR-STID0000002872 Unknown Somatic WGS Illumina GAIIx SRRM1 10250 CPCGene hg19 1 24989291 24989291 + Missense_Mutation SNP C G CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAN1C1 57134 CPCGene hg19 1 26107553 26107553 + Missense_Mutation SNP C T CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 SEPN1 0 CPCGene hg19 1 26126788 26126788 + Missense_Mutation SNP C T CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 EXTL1 2134 broad.mit.edu hg19 1 26349846 26349846 + Missense_Mutation SNP C A TCGA-G9-7519-01 Unknown Somatic WXS Illumina GAIIx UBXN11 91544 broad.mit.edu hg19 1 26608843 26608843 + Missense_Mutation SNP C A PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx UBXN11 91544 broad.mit.edu hg19 1 26608852 26608852 + Missense_Mutation SNP G A PR-05-3440-Tumor Unknown Somatic WXS Illumina GAIIx UBXN11 91544 CPCGene hg19 1 26608885 26608885 + Missense_Mutation SNP C T CPCG0366-F1 Unknown Somatic WXS Illumina HiSeq 2500 UBXN11 91544 broad.mit.edu hg19 1 26608885 26608885 + Missense_Mutation SNP C T P05-3859-Tumor Unknown Somatic WXS Illumina GAIIx UBXN11 91544 broad.mit.edu hg19 1 26608889 26608889 + Missense_Mutation SNP A T TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx UBXN11 91544 broad.mit.edu hg19 1 26608889 26608889 + Missense_Mutation SNP A T P05-3859-Tumor Unknown Somatic WXS Illumina GAIIx UBXN11 91544 broad.mit.edu hg19 1 26608889 26608889 + Missense_Mutation SNP A T P09-1372-Tumor Unknown Somatic WXS Illumina GAIIx RPS6KA1 6195 broad.mit.edu hg19 1 26877918 26877918 + Missense_Mutation SNP G C PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx RPS6KA1 6195 CPCGene hg19 1 26887617 26887617 + Missense_Mutation SNP C T CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARID1A 8289 broad.mit.edu hg19 1 27106761 27106761 + Missense_Mutation SNP A G TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx SYTL1 84958 broad.mit.edu hg19 1 27674032 27674032 + Missense_Mutation SNP G A TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx SYTL1 84958 CPCGene hg19 1 27675923 27675923 + Missense_Mutation SNP G A CPCG0241-F1 Unknown Somatic WXS Illumina HiSeq 2500 AHDC1 27245 broad.mit.edu hg19 1 27874814 27874814 + Missense_Mutation SNP C T TCGA-EJ-7783-01 Unknown Somatic WXS Illumina GAIIx AHDC1 27245 CPCGene hg19 1 27876677 27876677 + Missense_Mutation SNP G A CPCG0258-F1 Unknown Somatic WXS Illumina HiSeq 2500 AHDC1 27245 CPCGene hg19 1 27876809 27876809 + Missense_Mutation SNP G A CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 SESN2 83667 CPCGene hg19 1 28605651 28605651 + Missense_Mutation SNP C T CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 PHACTR4 65979 broad.mit.edu hg19 1 28764899 28764899 + Missense_Mutation SNP G T TCGA-XJ-A83G-01 Unknown Somatic WXS Illumina GAIIx RAB42 115273 CPCGene hg19 1 28920561 28920561 + Missense_Mutation SNP C T CPCG0255-F1 Unknown Somatic WXS Illumina HiSeq 2500 PTPRU 10076 broad.mit.edu hg19 1 29637991 29637991 + Missense_Mutation SNP G C PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx NKAIN1 79570 CPCGene hg19 1 31660955 31660955 + Missense_Mutation SNP A G CPCG0412-F1 Unknown Somatic WXS Illumina HiSeq 2500 TINAGL1 64129 broad.mit.edu hg19 1 32050623 32050623 + Missense_Mutation SNP C T TCGA-HC-A6AO-01 Unknown Somatic WXS Illumina GAIIx SPOCD1 90853 CPCGene hg19 1 32256580 32256580 + Missense_Mutation SNP C A CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPOCD1 90853 CPCGene hg19 1 32259395 32259395 + Missense_Mutation SNP T A CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPOCD1 90853 CPCGene hg19 1 32280924 32280924 + Missense_Mutation SNP G A CPCG0355-F1 Unknown Somatic WXS Illumina HiSeq 2500 KPNA6 23633 broad.mit.edu hg19 1 32622470 32622470 + Missense_Mutation SNP A T TCGA-QU-A6IO-01 Unknown Somatic WXS Illumina GAIIx SYNC 81493 broad.mit.edu hg19 1 33149862 33149862 + Missense_Mutation SNP T C TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx S100PBP 64766 CPCGene hg19 1 33292405 33292405 + Missense_Mutation SNP G T CPCG0078-F1 Unknown Somatic WXS Illumina HiSeq 2500 HPCA 3208 CPCGene hg19 1 33354846 33354846 + Missense_Mutation SNP T A CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 PHC2 1912 broad.mit.edu hg19 1 33794595 33794595 + Missense_Mutation SNP C A P07-837 Unknown Somatic WGS Illumina GAIIx CSMD2 114784 broad.mit.edu hg19 1 34015923 34015923 + Missense_Mutation SNP G A TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx CSMD2 114784 broad.mit.edu hg19 1 34102147 34102147 + Missense_Mutation SNP C T TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx CSMD2 114784 broad.mit.edu hg19 1 34181939 34181939 + Missense_Mutation SNP C T P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx C1 0 CPCGene hg19 1 34643468 34643468 + Missense_Mutation SNP C T CPCG0341-F1 Unknown Somatic WXS Illumina HiSeq 2500 C1 0 broad.mit.edu hg19 1 34662989 34662989 + Missense_Mutation SNP C G PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx DLGAP3 58512 broad.mit.edu hg19 1 35370062 35370062 + Missense_Mutation SNP G A TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx ZMYM6 9204 broad.mit.edu hg19 1 35476620 35476620 + Missense_Mutation SNP T C P05-1657 Unknown Somatic WGS Illumina GAIIx ZMYM1 79830 broad.mit.edu hg19 1 35569904 35569904 + Missense_Mutation SNP T G PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx SFPQ 6421 broad.mit.edu hg19 1 35652826 35652826 + Missense_Mutation SNP G A PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx ZMYM4 9202 broad.mit.edu hg19 1 35855556 35855556 + Missense_Mutation SNP A G TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx NCDN 23154 broad.mit.edu hg19 1 36028872 36028872 + Missense_Mutation SNP G T TCGA-EJ-7785-01 Unknown Somatic WXS Illumina GAIIx EVA1B 55194 broad.mit.edu hg19 1 36788016 36788016 + Missense_Mutation SNP C T TCGA-J4-A67K-01 Unknown Somatic WXS Illumina GAIIx OSCP1 127700 broad.mit.edu hg19 1 36897424 36897424 + Missense_Mutation SNP G A PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx GRIK3 2899 broad.mit.edu hg19 1 37315953 37315953 + Missense_Mutation SNP C T TCGA-2A-A8VL-01 Unknown Somatic WXS Illumina GAIIx GRIK3 2899 broad.mit.edu hg19 1 37324731 37324731 + Missense_Mutation SNP C T TCGA-G9-6348-01 Unknown Somatic WXS Illumina GAIIx GRIK3 2899 broad.mit.edu hg19 1 37325526 37325526 + Missense_Mutation SNP C T PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx GRIK3 2899 CPCGene hg19 1 37346244 37346244 + Missense_Mutation SNP C T CPCG0003-F1 Unknown Somatic WXS Illumina HiSeq 2500 GRIK3 2899 CPCGene hg19 1 37346363 37346363 + Missense_Mutation SNP G T CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 GNL2 29889 broad.mit.edu hg19 1 38034732 38034732 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx GNL2 29889 EMBL hg19 1 38056411 38056411 + Missense_Mutation SNP T A EOPC-10 Unknown Somatic WGS Illumina HiSeq2000 MTF1 4520 broad.mit.edu hg19 1 38304391 38304391 + Missense_Mutation SNP A G P05-3436-Tumor Unknown Somatic WXS Illumina GAIIx INPP5B 3633 broad.mit.edu hg19 1 38338661 38338661 + Missense_Mutation SNP T C TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx UTP11L 0 broad.mit.edu hg19 1 38478519 38478519 + Missense_Mutation SNP A C TCGA-EJ-7218-01 Unknown Somatic WXS Illumina GAIIx MACF1 23499 broad.mit.edu hg19 1 39782157 39782157 + Missense_Mutation SNP C G TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx MACF1 23499 broad.mit.edu hg19 1 39853894 39853894 + Missense_Mutation SNP G T TCGA-J4-A83M-01 Unknown Somatic WXS Illumina GAIIx KIAA0754 643314 CPCGene hg19 1 39877771 39877771 + Missense_Mutation SNP C T CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 MACF1 23499 broad.mit.edu hg19 1 39920741 39920741 + Missense_Mutation SNP G A TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx TRIT1 54802 broad.mit.edu hg19 1 40318533 40318533 + Missense_Mutation SNP T A TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx HIVEP3 59269 CPCGene hg19 1 42045835 42045835 + Missense_Mutation SNP C A CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 HIVEP3 59269 CPCGene hg19 1 42048091 42048091 + Missense_Mutation SNP G A CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 TIE1 7075 broad.mit.edu hg19 1 43779588 43779588 + Missense_Mutation SNP C T TCGA-2A-A8VO-01 Unknown Somatic WXS Illumina GAIIx ELOVL1 64834 broad.mit.edu hg19 1 43829648 43829648 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx MED8 112950 CPCGene hg19 1 43852332 43852332 + Missense_Mutation SNP G A CPCG0238-F1 Unknown Somatic WXS Illumina HiSeq 2500 SZT2 23334 broad.mit.edu hg19 1 43898078 43898078 + Missense_Mutation SNP C G PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx SZT2 23334 broad.mit.edu hg19 1 43906957 43906957 + Missense_Mutation SNP A T TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx SZT2 23334 broad.mit.edu hg19 1 43913222 43913222 + Missense_Mutation SNP T A TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx IPO13 9670 broad.mit.edu hg19 1 44415596 44415596 + Missense_Mutation SNP T G TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx ATP6V0B 533 broad.mit.edu hg19 1 44442867 44442867 + Missense_Mutation SNP G C TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx B4GALT2 8704 broad.mit.edu hg19 1 44446882 44446882 + Missense_Mutation SNP T A TCGA-2A-A8VO-01 Unknown Somatic WXS Illumina GAIIx B4GALT2 8704 broad.mit.edu hg19 1 44450654 44450654 + Missense_Mutation SNP G T TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx SLC6A9 6536 CPCGene hg19 1 44476505 44476505 + Missense_Mutation SNP C T CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 PLK3 1263 broad.mit.edu hg19 1 45270100 45270100 + Missense_Mutation SNP T C TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx BTBD19 149478 CPCGene hg19 1 45274531 45274531 + Missense_Mutation SNP A G CPCG0342-F1 Unknown Somatic WXS Illumina HiSeq 2500 MMACHC 25974 CPCGene hg19 1 45973191 45973191 + Missense_Mutation SNP G T CPCG0205-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCDC17 149483 broad.mit.edu hg19 1 46086625 46086625 + Missense_Mutation SNP G A TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx MAST2 23139 broad.mit.edu hg19 1 46493409 46493409 + Missense_Mutation SNP A T TCGA-G9-6363-01 Unknown Somatic WXS Illumina GAIIx DMBX1 127343 broad.mit.edu hg19 1 46977974 46977974 + Missense_Mutation SNP C T P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx EFCAB14 9813 broad.mit.edu hg19 1 47149017 47149017 + Missense_Mutation SNP C T TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx CYP4A22 284541 broad.mit.edu hg19 1 47606477 47606477 + Missense_Mutation SNP G A PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx CYP4A22 284541 broad.mit.edu hg19 1 47607271 47607271 + Missense_Mutation SNP C T PR-3043 Unknown Somatic WGS Illumina GAIIx ELAVL4 1996 broad.mit.edu hg19 1 50642827 50642827 + Missense_Mutation SNP C T TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx FAF1 11124 broad.mit.edu hg19 1 51049325 51049325 + Missense_Mutation SNP T C TCGA-QU-A6IP-01 Unknown Somatic WXS Illumina GAIIx FAF1 11124 broad.mit.edu hg19 1 51253785 51253785 + Missense_Mutation SNP C T TCGA-EJ-7783-01 Unknown Somatic WXS Illumina GAIIx TTC39A 22996 broad.mit.edu hg19 1 51760109 51760109 + Missense_Mutation SNP C T PR-09-2517-Tumor Unknown Somatic WXS Illumina GAIIx EPS15 2060 broad.mit.edu hg19 1 51926807 51926807 + Missense_Mutation SNP C T PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx NRD1 0 broad.mit.edu hg19 1 52260270 52260270 + Missense_Mutation SNP G A P07-5037 Unknown Somatic WGS Illumina GAIIx ORC1 4998 broad.mit.edu hg19 1 52840542 52840542 + Missense_Mutation SNP G A PR-03-3125 Unknown Somatic WGS Illumina GAIIx ZCCHC11 23318 broad.mit.edu hg19 1 52941095 52941095 + Missense_Mutation SNP C G TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx ZYG11B 79699 broad.mit.edu hg19 1 53237283 53237283 + Missense_Mutation SNP A G P07-684-Tumor Unknown Somatic WXS Illumina GAIIx ECHDC2 55268 broad.mit.edu hg19 1 53370716 53370716 + Missense_Mutation SNP G A PR-2762-Tumor Unknown Somatic WXS Illumina GAIIx C1 0 EMBL hg19 1 53682458 53682458 + Missense_Mutation SNP G A EOPC-05 Unknown Somatic WGS Illumina HiSeq2000 GLIS1 148979 broad.mit.edu hg19 1 53990499 53990499 + Missense_Mutation SNP C T TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx NDC1 55706 CPCGene hg19 1 54291535 54291535 + Missense_Mutation SNP C G CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 DIO1 1733 broad.mit.edu hg19 1 54360027 54360027 + Missense_Mutation SNP G A TCGA-G9-6379-01 Unknown Somatic WXS Illumina GAIIx TMEM59 9528 CPCGene hg19 1 54518751 54518751 + Missense_Mutation SNP T C CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 CDCP2 200008 broad.mit.edu hg19 1 54605390 54605390 + Missense_Mutation SNP C T TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx CDCP2 200008 broad.mit.edu hg19 1 54610159 54610159 + Missense_Mutation SNP A G PR-3051-Tumor Unknown Somatic WXS Illumina GAIIx MROH7 374977 CPCGene hg19 1 55175666 55175666 + Missense_Mutation SNP G A CPCG0047-F1 Unknown Somatic WXS Illumina HiSeq 2500 USP24 23358 broad.mit.edu hg19 1 55589225 55589225 + Missense_Mutation SNP C G P07-144 Unknown Somatic WGS Illumina GAIIx USP24 23358 broad.mit.edu hg19 1 55591099 55591099 + Missense_Mutation SNP G T P08-501 Unknown Somatic WGS Illumina GAIIx USP24 23358 CPCGene hg19 1 55624560 55624560 + Missense_Mutation SNP A G CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 C1 0 CPCGene hg19 1 57257888 57257888 + Missense_Mutation SNP C T CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 OMA1 115209 broad.mit.edu hg19 1 58999837 58999837 + Missense_Mutation SNP A T P08-716 Unknown Somatic WGS Illumina GAIIx TACSTD2 4070 broad.mit.edu hg19 1 59042487 59042487 + Missense_Mutation SNP G T TCGA-2A-A8VV-01 Unknown Somatic WXS Illumina GAIIx NFIA 4774 CPCGene hg19 1 61892140 61892140 + Missense_Mutation SNP A G CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 INADL 0 broad.mit.edu hg19 1 62582250 62582250 + Missense_Mutation SNP G A P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx KANK4 163782 CPCGene hg19 1 62739843 62739843 + Missense_Mutation SNP T C CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 DOCK7 85440 broad.mit.edu hg19 1 62941378 62941378 + Missense_Mutation SNP C G TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx DOCK7 85440 broad.mit.edu hg19 1 63042988 63042988 + Missense_Mutation SNP C A PR-05-3595 Unknown Somatic WGS Illumina GAIIx CACHD1 57685 CPCGene hg19 1 65130225 65130225 + Missense_Mutation SNP T C CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 JAK1 3716 broad.mit.edu hg19 1 65310466 65310466 + Missense_Mutation SNP C T TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx JAK1 3716 broad.mit.edu hg19 1 65313240 65313240 + Missense_Mutation SNP T A P09-628 Unknown Somatic WGS Illumina GAIIx PDE4B 5142 CPCGene hg19 1 66798147 66798147 + Missense_Mutation SNP G A CPCG0048-F1 Unknown Somatic WXS Illumina HiSeq 2500 PDE4B 5142 CPCGene hg19 1 66829163 66829163 + Missense_Mutation SNP A G CPCG0078-F1 Unknown Somatic WXS Illumina HiSeq 2500 LRRC7 57554 broad.mit.edu hg19 1 70484494 70484494 + Missense_Mutation SNP T C TCGA-J4-A83N-01 Unknown Somatic WXS Illumina GAIIx LRRC7 57554 broad.mit.edu hg19 1 70504094 70504094 + Missense_Mutation SNP C T TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx LRRC40 55631 broad.mit.edu hg19 1 70625085 70625085 + Missense_Mutation SNP G A P09-1580-Tumor Unknown Somatic WXS Illumina GAIIx SRSF11 9295 broad.mit.edu hg19 1 70694125 70694125 + Missense_Mutation SNP C T P04-47-Tumor Unknown Somatic WXS Illumina GAIIx SRSF11 9295 broad.mit.edu hg19 1 70712551 70712551 + Missense_Mutation SNP A G PR-0508 Unknown Somatic WGS Illumina GAIIx NEGR1 257194 broad.mit.edu hg19 1 72241873 72241873 + Missense_Mutation SNP G A P09-1580-Tumor Unknown Somatic WXS Illumina GAIIx LRRIQ3 127255 broad.mit.edu hg19 1 74507397 74507397 + Missense_Mutation SNP C A TCGA-G9-6348-01 Unknown Somatic WXS Illumina GAIIx ERICH3 127254 broad.mit.edu hg19 1 75072309 75072309 + Missense_Mutation SNP C T TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx ERICH3 127254 broad.mit.edu hg19 1 75078368 75078368 + Missense_Mutation SNP G C PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx ERICH3 127254 broad.mit.edu hg19 1 75107024 75107024 + Missense_Mutation SNP C T P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx LHX8 431707 CPCGene hg19 1 75602827 75602827 + Missense_Mutation SNP T C CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 LHX8 431707 CPCGene hg19 1 75608861 75608861 + Missense_Mutation SNP C T CPCG0342-F1 Unknown Somatic WXS Illumina HiSeq 2500 AK5 26289 broad.mit.edu hg19 1 77759633 77759633 + Missense_Mutation SNP A G PR-09-2744-Tumor Unknown Somatic WXS Illumina GAIIx USP33 23032 broad.mit.edu hg19 1 78180384 78180384 + Missense_Mutation SNP A G P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx NEXN 91624 CPCGene hg19 1 78383685 78383685 + Missense_Mutation SNP C T CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 NEXN 91624 broad.mit.edu hg19 1 78407743 78407743 + Missense_Mutation SNP C T PR-01-2492-Tumor Unknown Somatic WXS Illumina GAIIx PTGFR 5737 broad.mit.edu hg19 1 78959037 78959037 + Missense_Mutation SNP A C TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx LPHN2 0 broad.mit.edu hg19 1 82409004 82409004 + Missense_Mutation SNP A G TCGA-EJ-5510-01 Unknown Somatic WXS Illumina GAIIx DNASE2B 58511 CPCGene hg19 1 84864300 84864300 + Missense_Mutation SNP T A CPCG0047-F1 Unknown Somatic WXS Illumina HiSeq 2500 LPAR3 23566 broad.mit.edu hg19 1 85279651 85279651 + Missense_Mutation SNP C G TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx BCL10 8915 broad.mit.edu hg19 1 85736554 85736554 + Missense_Mutation SNP T C PR-08-4154 Unknown Somatic WGS Illumina GAIIx COL24A1 255631 broad.mit.edu hg19 1 86210365 86210365 + Missense_Mutation SNP T G TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx CLCA1 1179 CPCGene hg19 1 86954728 86954728 + Missense_Mutation SNP C T CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 PKN2 5586 CPCGene hg19 1 89271584 89271584 + Missense_Mutation SNP G A CPCG0057-F1 Unknown Somatic WXS Illumina HiSeq 2500 GTF2B 2959 broad.mit.edu hg19 1 89319013 89319013 + Missense_Mutation SNP A T TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx LRRC8B 23507 broad.mit.edu hg19 1 90058350 90058350 + Missense_Mutation SNP G T PR-09-5630-Tumor Unknown Somatic WXS Illumina GAIIx LRRC8D 55144 CPCGene hg19 1 90399259 90399259 + Missense_Mutation SNP A C CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 HFM1 164045 broad.mit.edu hg19 1 91851252 91851252 + Missense_Mutation SNP T C TCGA-EJ-7123-01 Unknown Somatic WXS Illumina GAIIx HFM1 164045 CPCGene hg19 1 91851336 91851336 + Missense_Mutation SNP A G CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 TGFBR3 7049 CPCGene hg19 1 92181865 92181865 + Missense_Mutation SNP G A CPCG0413-F1 Unknown Somatic WXS Illumina HiSeq 2500 C1 0 broad.mit.edu hg19 1 92709886 92709886 + Missense_Mutation SNP G A TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx RPAP2 79871 broad.mit.edu hg19 1 92789789 92789789 + Missense_Mutation SNP G C TCGA-HC-7748-01 Unknown Somatic WXS Illumina GAIIx GFI1 2672 broad.mit.edu hg19 1 92944268 92944268 + Missense_Mutation SNP T G TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx CCDC18 343099 CPCGene hg19 1 93667516 93667516 + Missense_Mutation SNP A T CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 DNTTIP2 30836 broad.mit.edu hg19 1 94342395 94342395 + Missense_Mutation SNP T C PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx DNTTIP2 30836 broad.mit.edu hg19 1 94343077 94343077 + Missense_Mutation SNP T G P07-837 Unknown Somatic WGS Illumina GAIIx ABCA4 24 broad.mit.edu hg19 1 94506837 94506837 + Missense_Mutation SNP G A TCGA-G9-6378-01 Unknown Somatic WXS Illumina GAIIx ABCA4 24 broad.mit.edu hg19 1 94526101 94526101 + Missense_Mutation SNP A G TCGA-EJ-7797-01 Unknown Somatic WXS Illumina GAIIx ABCA4 24 broad.mit.edu hg19 1 94526159 94526159 + Missense_Mutation SNP A G P08-1042 Unknown Somatic WGS Illumina GAIIx LPPR5 0 broad.mit.edu hg19 1 99380467 99380467 + Missense_Mutation SNP C T TCGA-2A-A8VL-01 Unknown Somatic WXS Illumina GAIIx LPPR5 0 broad.mit.edu hg19 1 99422183 99422183 + Missense_Mutation SNP G A TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx LPPR4 0 broad.mit.edu hg19 1 99771528 99771528 + Missense_Mutation SNP G A PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx LPPR4 0 broad.mit.edu hg19 1 99772185 99772185 + Missense_Mutation SNP G A TCGA-J4-A83M-01 Unknown Somatic WXS Illumina GAIIx PALMD 54873 broad.mit.edu hg19 1 100152323 100152323 + Missense_Mutation SNP C T TCGA-EJ-5509-01 Unknown Somatic WXS Illumina GAIIx PALMD 54873 broad.mit.edu hg19 1 100154852 100154852 + Missense_Mutation SNP A T TCGA-G9-6377-01 Unknown Somatic WXS Illumina GAIIx TRMT13 54482 broad.mit.edu hg19 1 100613731 100613731 + Missense_Mutation SNP A T P09-1580-Tumor Unknown Somatic WXS Illumina GAIIx GPR88 54112 broad.mit.edu hg19 1 101005117 101005117 + Missense_Mutation SNP G C TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx VCAM1 7412 CPCGene hg19 1 101185467 101185467 + Missense_Mutation SNP A G CPCG0184-F1 Unknown Somatic WXS Illumina HiSeq 2500 VCAM1 7412 broad.mit.edu hg19 1 101188742 101188742 + Missense_Mutation SNP C G TCGA-HC-7075-01 Unknown Somatic WGS Illumina GAIIx COL11A1 1301 CPCGene hg19 1 103355113 103355113 + Missense_Mutation SNP A T CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 COL11A1 1301 CPCGene hg19 1 103404628 103404628 + Missense_Mutation SNP G A CPCG0412-F1 Unknown Somatic WXS Illumina HiSeq 2500 COL11A1 1301 broad.mit.edu hg19 1 103468003 103468003 + Missense_Mutation SNP T A TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx COL11A1 1301 broad.mit.edu hg19 1 103540313 103540313 + Missense_Mutation SNP A T TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx COL11A1 1301 broad.mit.edu hg19 1 103544235 103544235 + Missense_Mutation SNP G A TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx PRMT6 55170 broad.mit.edu hg19 1 107600027 107600027 + Missense_Mutation SNP C T TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx NTNG1 22854 broad.mit.edu hg19 1 107961230 107961230 + Missense_Mutation SNP G A TCGA-CH-5740-01 Unknown Somatic WXS Illumina GAIIx NTNG1 22854 broad.mit.edu hg19 1 108023234 108023234 + Missense_Mutation SNP G A TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx VAV3 10451 broad.mit.edu hg19 1 108417551 108417551 + Missense_Mutation SNP T A TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx STXBP3 6814 CPCGene hg19 1 109325293 109325293 + Missense_Mutation SNP G C CPCG0372-F1 Unknown Somatic WXS Illumina HiSeq 2500 AKNAD1 254268 broad.mit.edu hg19 1 109394369 109394369 + Missense_Mutation SNP C T P03-1426 Unknown Somatic WGS Illumina GAIIx SARS 6301 broad.mit.edu hg19 1 109777858 109777858 + Missense_Mutation SNP T C PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx CELSR2 1952 broad.mit.edu hg19 1 109803759 109803759 + Missense_Mutation SNP A G TCGA-EJ-7783-01 Unknown Somatic WXS Illumina GAIIx PSRC1 84722 broad.mit.edu hg19 1 109823645 109823645 + Missense_Mutation SNP C T TCGA-EJ-5517-01 Unknown Somatic WXS Illumina GAIIx MYBPHL 343263 broad.mit.edu hg19 1 109837874 109837874 + Missense_Mutation SNP G T TCGA-EJ-7791-01 Unknown Somatic WGS Illumina GAIIx SORT1 6272 broad.mit.edu hg19 1 109867585 109867585 + Missense_Mutation SNP T G TCGA-J4-A67N-01 Unknown Somatic WXS Illumina GAIIx AMPD2 271 broad.mit.edu hg19 1 110171852 110171852 + Missense_Mutation SNP G C TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx EPS8L3 79574 broad.mit.edu hg19 1 110301232 110301232 + Missense_Mutation SNP A G TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx ALX3 257 CPCGene hg19 1 110603403 110603403 + Missense_Mutation SNP G A CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 ALX3 257 broad.mit.edu hg19 1 110604148 110604148 + Missense_Mutation SNP C T TCGA-J4-A6M7-01 Unknown Somatic WXS Illumina GAIIx SLC16A4 9122 broad.mit.edu hg19 1 110925493 110925493 + Missense_Mutation SNP C G TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx LRIF1 55791 broad.mit.edu hg19 1 111494145 111494145 + Missense_Mutation SNP G T TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx DENND2D 79961 broad.mit.edu hg19 1 111737241 111737241 + Missense_Mutation SNP G A TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx OVGP1 5016 CPCGene hg19 1 111957563 111957563 + Missense_Mutation SNP C A CPCG0355-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADORA3 140 broad.mit.edu hg19 1 112042634 112042634 + Missense_Mutation SNP C A TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx KCND3 3752 broad.mit.edu hg19 1 112524316 112524316 + Missense_Mutation SNP C T TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx CTTNBP2NL 55917 broad.mit.edu hg19 1 112999391 112999391 + Missense_Mutation SNP C T P07-144 Unknown Somatic WGS Illumina GAIIx ST7L 54879 CPCGene hg19 1 113153614 113153614 + Missense_Mutation SNP C T CPCG0184-F1 Unknown Somatic WXS Illumina HiSeq 2500 PPM1J 333926 CPCGene hg19 1 113256187 113256187 + Missense_Mutation SNP A T CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 LRIG2 9860 broad.mit.edu hg19 1 113653021 113653021 + Missense_Mutation SNP T G P08-501 Unknown Somatic WGS Illumina GAIIx LRIG2 9860 broad.mit.edu hg19 1 113658960 113658960 + Missense_Mutation SNP C T TCGA-J4-A6M7-01 Unknown Somatic WXS Illumina GAIIx PHTF1 10745 broad.mit.edu hg19 1 114254647 114254647 + Missense_Mutation SNP C T TCGA-G9-6333-01 Unknown Somatic WXS Illumina GAIIx PTPN22 26191 CPCGene hg19 1 114377584 114377584 + Missense_Mutation SNP G T CPCG0365-F1 Unknown Somatic WXS Illumina HiSeq 2500 DCLRE1B 64858 broad.mit.edu hg19 1 114448248 114448248 + Missense_Mutation SNP G T PR-08-556 Unknown Somatic WGS Illumina GAIIx DCLRE1B 64858 broad.mit.edu hg19 1 114450813 114450813 + Missense_Mutation SNP G A TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx SYT6 148281 CPCGene hg19 1 114641791 114641791 + Missense_Mutation SNP T A CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 AMPD1 270 broad.mit.edu hg19 1 115223006 115223006 + Missense_Mutation SNP A G TCGA-EJ-7786-01 Unknown Somatic WXS Illumina GAIIx SYCP1 6847 CPCGene hg19 1 115419379 115419379 + Missense_Mutation SNP T A CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 SYCP1 6847 broad.mit.edu hg19 1 115454198 115454198 + Missense_Mutation SNP C T TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx SYCP1 6847 broad.mit.edu hg19 1 115489915 115489915 + Missense_Mutation SNP C A TCGA-HC-7820-01 Unknown Somatic WXS Illumina GAIIx MAB21L3 126868 broad.mit.edu hg19 1 116670877 116670877 + Missense_Mutation SNP A T P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx ATP1A1 476 CPCGene hg19 1 116937896 116937896 + Missense_Mutation SNP G C CPCG0196-F1 Unknown Somatic WXS Illumina HiSeq 2500 PTGFRN 5738 broad.mit.edu hg19 1 117527516 117527516 + Missense_Mutation SNP C T P04-1084 Unknown Somatic WGS Illumina GAIIx PTGFRN 5738 broad.mit.edu hg19 1 117529548 117529548 + Missense_Mutation SNP C T TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx CD101 9398 broad.mit.edu hg19 1 117552477 117552477 + Missense_Mutation SNP C T TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx SPAG17 200162 broad.mit.edu hg19 1 118554950 118554950 + Missense_Mutation SNP C G TCGA-G9-6384-01 Unknown Somatic WXS Illumina GAIIx SPAG17 200162 broad.mit.edu hg19 1 118566010 118566010 + Missense_Mutation SNP G A PR-04-639-Tumor Unknown Somatic WXS Illumina GAIIx SPAG17 200162 CPCGene hg19 1 118567949 118567949 + Missense_Mutation SNP G A CPCG0213-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPAG17 200162 CPCGene hg19 1 118584597 118584597 + Missense_Mutation SNP C T CPCG0348-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPAG17 200162 CPCGene hg19 1 118629569 118629569 + Missense_Mutation SNP G A CPCG0199-F1 Unknown Somatic WXS Illumina HiSeq 2500 NOTCH2 4853 CPCGene hg19 1 120459005 120459005 + Missense_Mutation SNP T C CPCG0334-F1 Unknown Somatic WXS Illumina HiSeq 2500 PDE4DIP 9659 CPCGene hg19 1 144904733 144904733 + Missense_Mutation SNP A C CPCG0081-F1 Unknown Somatic WXS Illumina HiSeq 2500 HFE2 148738 broad.mit.edu hg19 1 145415767 145415767 + Missense_Mutation SNP A C TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx TXNIP 10628 broad.mit.edu hg19 1 145439016 145439016 + Missense_Mutation SNP T G PR-08-4154 Unknown Somatic WGS Illumina GAIIx TXNIP 10628 broad.mit.edu hg19 1 145439910 145439910 + Missense_Mutation SNP T C TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx TXNIP 10628 broad.mit.edu hg19 1 145440915 145440915 + Missense_Mutation SNP T C PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx ANKRD35 148741 broad.mit.edu hg19 1 145561391 145561391 + Missense_Mutation SNP C T TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx GJA5 2702 broad.mit.edu hg19 1 147230995 147230995 + Missense_Mutation SNP G A TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx CIART 148523 broad.mit.edu hg19 1 150259209 150259209 + Missense_Mutation SNP G A TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx RPRD2 23248 broad.mit.edu hg19 1 150445566 150445566 + Missense_Mutation SNP C A P03-2345 Unknown Somatic WGS Illumina GAIIx ECM1 1893 broad.mit.edu hg19 1 150484085 150484085 + Missense_Mutation SNP T G PR-09-2744-Tumor Unknown Somatic WXS Illumina GAIIx MCL1 4170 broad.mit.edu hg19 1 150551355 150551355 + Missense_Mutation SNP C T TCGA-EJ-5542-01 Unknown Somatic WXS Illumina GAIIx ARNT 405 CPCGene hg19 1 150825278 150825278 + Missense_Mutation SNP C T CPCG0268-F1 Unknown Somatic WXS Illumina HiSeq 2500 CERS2 29956 broad.mit.edu hg19 1 150938748 150938748 + Missense_Mutation SNP C T TCGA-J4-A67K-01 Unknown Somatic WXS Illumina GAIIx LYSMD1 388695 broad.mit.edu hg19 1 151137675 151137675 + Missense_Mutation SNP C T TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx PSMD4 5710 CPCGene hg19 1 151238569 151238569 + Missense_Mutation SNP T A CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 PI4KB 5298 broad.mit.edu hg19 1 151276078 151276078 + Missense_Mutation SNP C T PR-04-3347-Tumor Unknown Somatic WXS Illumina GAIIx POGZ 23126 broad.mit.edu hg19 1 151395884 151395884 + Missense_Mutation SNP T C P05-3436-Tumor Unknown Somatic WXS Illumina GAIIx CGN 57530 broad.mit.edu hg19 1 151509267 151509267 + Missense_Mutation SNP G A TCGA-HC-8213-01 Unknown Somatic WXS Illumina GAIIx TCHH 7062 broad.mit.edu hg19 1 152082346 152082346 + Missense_Mutation SNP A G PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx RPTN 126638 CPCGene hg19 1 152129100 152129100 + Missense_Mutation SNP C T CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 HRNR 388697 broad.mit.edu hg19 1 152192307 152192307 + Missense_Mutation SNP G T TCGA-G9-6336-01 Unknown Somatic WGS Illumina GAIIx FLG 2312 broad.mit.edu hg19 1 152277643 152277643 + Missense_Mutation SNP C T PR-04-1243 Unknown Somatic WGS Illumina GAIIx FLG2 388698 broad.mit.edu hg19 1 152327667 152327667 + Missense_Mutation SNP C T TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx FLG2 388698 broad.mit.edu hg19 1 152327811 152327811 + Missense_Mutation SNP G A PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx CRNN 49860 broad.mit.edu hg19 1 152382359 152382359 + Missense_Mutation SNP G A TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx CRNN 49860 CPCGene hg19 1 152382481 152382481 + Missense_Mutation SNP C A CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 LCE2D 353141 broad.mit.edu hg19 1 152636733 152636733 + Missense_Mutation SNP G T TCGA-CH-5740-01 Unknown Somatic WXS Illumina GAIIx LCE2B 26239 broad.mit.edu hg19 1 152659383 152659383 + Missense_Mutation SNP C T TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx LCE2A 353139 broad.mit.edu hg19 1 152671526 152671526 + Missense_Mutation SNP G C P08-5852 Unknown Somatic WGS Illumina GAIIx KPRP 448834 broad.mit.edu hg19 1 152732100 152732100 + Missense_Mutation SNP G A TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx KPRP 448834 broad.mit.edu hg19 1 152732860 152732860 + Missense_Mutation SNP C T TCGA-EJ-7325-01 Unknown Somatic WXS Illumina GAIIx KPRP 448834 broad.mit.edu hg19 1 152733157 152733157 + Missense_Mutation SNP G A PR-00-1823-Tumor Unknown Somatic WXS Illumina GAIIx KPRP 448834 broad.mit.edu hg19 1 152733337 152733337 + Missense_Mutation SNP C T P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx KPRP 448834 broad.mit.edu hg19 1 152733398 152733398 + Missense_Mutation SNP G A TCGA-EJ-7784-01 Unknown Somatic WXS Illumina GAIIx LCE1F 353137 CPCGene hg19 1 152749004 152749004 + Missense_Mutation SNP G A CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 IVL 3713 CPCGene hg19 1 152883056 152883056 + Missense_Mutation SNP A G CPCG0363-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPRR1A 6698 broad.mit.edu hg19 1 152957832 152957832 + Missense_Mutation SNP C A TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx SPRR3 6707 broad.mit.edu hg19 1 152975765 152975765 + Missense_Mutation SNP G T TCGA-EJ-5516-01 Unknown Somatic WXS Illumina GAIIx SPRR3 6707 broad.mit.edu hg19 1 152975781 152975781 + Missense_Mutation SNP G A TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx SPRR2E 6704 broad.mit.edu hg19 1 153066083 153066083 + Missense_Mutation SNP G T TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx LELP1 149018 CPCGene hg19 1 153177429 153177429 + Missense_Mutation SNP C A CPCG0344-F1 Unknown Somatic WXS Illumina HiSeq 2500 PGLYRP4 57115 broad.mit.edu hg19 1 153314146 153314146 + Missense_Mutation SNP G A TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx INTS3 65123 CPCGene hg19 1 153724788 153724788 + Missense_Mutation SNP G C CPCG0184-F1 Unknown Somatic WXS Illumina HiSeq 2500 GATAD2B 57459 broad.mit.edu hg19 1 153782653 153782653 + Missense_Mutation SNP T C PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx GATAD2B 57459 broad.mit.edu hg19 1 153790536 153790536 + Missense_Mutation SNP G A TCGA-2A-A8VO-01 Unknown Somatic WXS Illumina GAIIx CREB3L4 148327 broad.mit.edu hg19 1 153945675 153945675 + Missense_Mutation SNP G T PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx ATP8B2 57198 EMBL hg19 1 154303354 154303354 + Missense_Mutation SNP C A EOPC-05 Unknown Somatic WGS Illumina HiSeq2000 ATP8B2 57198 broad.mit.edu hg19 1 154303605 154303605 + Missense_Mutation SNP G T TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx ATP8B2 57198 CPCGene hg19 1 154310132 154310132 + Missense_Mutation SNP C T CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATP8B2 57198 CPCGene hg19 1 154317450 154317450 + Missense_Mutation SNP C T CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 SHE 126669 CPCGene hg19 1 154474169 154474169 + Missense_Mutation SNP T A CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZBTB7B 51043 broad.mit.edu hg19 1 154989073 154989073 + Missense_Mutation SNP C T PR-04-3113-Tumor Unknown Somatic WXS Illumina GAIIx SLC50A1 55974 broad.mit.edu hg19 1 155110477 155110477 + Missense_Mutation SNP C T TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx HCN3 57657 broad.mit.edu hg19 1 155255754 155255754 + Missense_Mutation SNP G T TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx ASH1L 55870 CPCGene hg19 1 155313251 155313251 + Missense_Mutation SNP T A CPCG0003-F1 Unknown Somatic WXS Illumina HiSeq 2500 ASH1L 55870 CPCGene hg19 1 155450718 155450718 + Missense_Mutation SNP G A CPCG0206-F1 Unknown Somatic WXS Illumina HiSeq 2500 ASH1L 55870 broad.mit.edu hg19 1 155451980 155451980 + Missense_Mutation SNP A T TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx DAP3 7818 broad.mit.edu hg19 1 155679583 155679583 + Missense_Mutation SNP G A PR-09-5702-Tumor Unknown Somatic WXS Illumina GAIIx DAP3 7818 broad.mit.edu hg19 1 155686809 155686809 + Missense_Mutation SNP C T PR-09-2517-Tumor Unknown Somatic WXS Illumina GAIIx KIAA0907 22889 broad.mit.edu hg19 1 155891693 155891693 + Missense_Mutation SNP G C TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx RXFP4 339403 CPCGene hg19 1 155911856 155911856 + Missense_Mutation SNP C T CPCG0246-F1 Unknown Somatic WXS Illumina HiSeq 2500 SSR2 6746 CPCGene hg19 1 155979420 155979420 + Missense_Mutation SNP C T CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 UBQLN4 56893 CPCGene hg19 1 156006809 156006809 + Missense_Mutation SNP T C CPCG0259-F1 Unknown Somatic WXS Illumina HiSeq 2500 SEMA4A 64218 broad.mit.edu hg19 1 156130795 156130795 + Missense_Mutation SNP C T PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx SMG5 23381 CPCGene hg19 1 156235961 156235961 + Missense_Mutation SNP G A CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPATCH4 54865 broad.mit.edu hg19 1 156565530 156565530 + Missense_Mutation SNP C G TCGA-HC-A6AO-01 Unknown Somatic WXS Illumina GAIIx GPATCH4 54865 broad.mit.edu hg19 1 156568035 156568035 + Missense_Mutation SNP A T PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx INSRR 3645 broad.mit.edu hg19 1 156828373 156828373 + Missense_Mutation SNP G A TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx NTRK1 4914 broad.mit.edu hg19 1 156830913 156830913 + Missense_Mutation SNP C T TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx ARHGEF11 9826 broad.mit.edu hg19 1 156909625 156909625 + Missense_Mutation SNP C T PR-3035-Tumor Unknown Somatic WXS Illumina GAIIx ARHGEF11 9826 CPCGene hg19 1 156917977 156917977 + Missense_Mutation SNP G A CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 ETV3L 440695 broad.mit.edu hg19 1 157062541 157062541 + Missense_Mutation SNP A G P08-5852 Unknown Somatic WGS Illumina GAIIx FCRL1 115350 broad.mit.edu hg19 1 157769875 157769875 + Missense_Mutation SNP C T PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx CD5L 922 broad.mit.edu hg19 1 157804358 157804358 + Missense_Mutation SNP A T PR-06-3199 Unknown Somatic WGS Illumina GAIIx CD5L 922 broad.mit.edu hg19 1 157804497 157804497 + Missense_Mutation SNP G T TCGA-VP-A87C-01 Unknown Somatic WXS Illumina GAIIx KIRREL 55243 broad.mit.edu hg19 1 158059381 158059381 + Missense_Mutation SNP C T TCGA-J4-A67S-01 Unknown Somatic WXS Illumina GAIIx CD1A 909 broad.mit.edu hg19 1 158225025 158225025 + Missense_Mutation SNP G C P04-1421-Tumor Unknown Somatic WXS Illumina GAIIx CD1A 909 broad.mit.edu hg19 1 158227225 158227225 + Missense_Mutation SNP G A PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx OR10K1 391109 broad.mit.edu hg19 1 158436009 158436009 + Missense_Mutation SNP C T TCGA-EJ-7784-01 Unknown Somatic WXS Illumina GAIIx OR10Z1 128368 broad.mit.edu hg19 1 158576525 158576525 + Missense_Mutation SNP C T TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx SPTA1 6708 CPCGene hg19 1 158583632 158583632 + Missense_Mutation SNP G A CPCG0238-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPTA1 6708 broad.mit.edu hg19 1 158585065 158585065 + Missense_Mutation SNP G A TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx SPTA1 6708 broad.mit.edu hg19 1 158613209 158613209 + Missense_Mutation SNP T A P03-1906-Tumor Unknown Somatic WXS Illumina GAIIx SPTA1 6708 CPCGene hg19 1 158615103 158615103 + Missense_Mutation SNP C T CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPTA1 6708 broad.mit.edu hg19 1 158622402 158622402 + Missense_Mutation SNP C T P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx SPTA1 6708 broad.mit.edu hg19 1 158631121 158631121 + Missense_Mutation SNP C T TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx SPTA1 6708 broad.mit.edu hg19 1 158637764 158637764 + Missense_Mutation SNP T C TCGA-G9-6365-01 Unknown Somatic WGS Illumina GAIIx OR6N1 128372 broad.mit.edu hg19 1 158736313 158736313 + Missense_Mutation SNP G A P05-3859-Tumor Unknown Somatic WXS Illumina GAIIx IFI16 3428 broad.mit.edu hg19 1 159002391 159002391 + Missense_Mutation SNP T A TCGA-J4-A83M-01 Unknown Somatic WXS Illumina GAIIx IFI16 3428 broad.mit.edu hg19 1 159002472 159002472 + Missense_Mutation SNP C A PR-3036-Tumor Unknown Somatic WXS Illumina GAIIx AIM2 9447 broad.mit.edu hg19 1 159033301 159033301 + Missense_Mutation SNP G A TCGA-CH-5740-01 Unknown Somatic WXS Illumina GAIIx CADM3 57863 broad.mit.edu hg19 1 159163778 159163778 + Missense_Mutation SNP T A PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx FCER1A 2205 broad.mit.edu hg19 1 159275921 159275921 + Missense_Mutation SNP C A TCGA-EJ-7314-01 Unknown Somatic WXS Illumina GAIIx OR10J5 127385 broad.mit.edu hg19 1 159505651 159505651 + Missense_Mutation SNP G A TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx CRP 1401 broad.mit.edu hg19 1 159683405 159683405 + Missense_Mutation SNP G A TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx C1 0 CPCGene hg19 1 159824684 159824684 + Missense_Mutation SNP G T CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 VSIG8 391123 broad.mit.edu hg19 1 159827904 159827904 + Missense_Mutation SNP G A TCGA-CH-5738-01 Unknown Somatic WXS Illumina GAIIx COPA 1314 CPCGene hg19 1 160276275 160276275 + Missense_Mutation SNP G A CPCG0380-F1 Unknown Somatic WXS Illumina HiSeq 2500 COPA 1314 CPCGene hg19 1 160309729 160309729 + Missense_Mutation SNP G A CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 VANGL2 57216 broad.mit.edu hg19 1 160385959 160385959 + Missense_Mutation SNP G A TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx SLAMF6 114836 broad.mit.edu hg19 1 160466070 160466070 + Missense_Mutation SNP A T TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx ITLN1 55600 CPCGene hg19 1 160850418 160850418 + Missense_Mutation SNP G A CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARHGAP30 257106 CPCGene hg19 1 161022524 161022524 + Missense_Mutation SNP T C CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 KLHDC9 126823 broad.mit.edu hg19 1 161069967 161069967 + Missense_Mutation SNP G A TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx USP21 27005 CPCGene hg19 1 161132847 161132847 + Missense_Mutation SNP A G CPCG0057-F1 Unknown Somatic WXS Illumina HiSeq 2500 PPOX 5498 CPCGene hg19 1 161137895 161137895 + Missense_Mutation SNP C T CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAMTS4 9507 broad.mit.edu hg19 1 161168219 161168219 + Missense_Mutation SNP G A P04-1084 Unknown Somatic WGS Illumina GAIIx C1 0 broad.mit.edu hg19 1 161334829 161334829 + Missense_Mutation SNP A G TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx HSPA6 3310 broad.mit.edu hg19 1 161494903 161494903 + Missense_Mutation SNP T G TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx HSPA6 3310 broad.mit.edu hg19 1 161494973 161494973 + Missense_Mutation SNP C G P05-620 Unknown Somatic WGS Illumina GAIIx FCGR3A 2214 CPCGene hg19 1 161518807 161518807 + Missense_Mutation SNP G A CPCG0374-F1 Unknown Somatic WXS Illumina HiSeq 2500 OLFML2B 25903 CPCGene hg19 1 161970084 161970084 + Missense_Mutation SNP G C CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 DDR2 4921 broad.mit.edu hg19 1 162722962 162722962 + Missense_Mutation SNP G C P08-217 Unknown Somatic WGS Illumina GAIIx RGS5 8490 broad.mit.edu hg19 1 163122355 163122355 + Missense_Mutation SNP C T TCGA-EJ-5504-01 Unknown Somatic WXS Illumina GAIIx RXRG 6258 broad.mit.edu hg19 1 165370515 165370515 + Missense_Mutation SNP C T TCGA-G9-6333-01 Unknown Somatic WXS Illumina GAIIx RXRG 6258 broad.mit.edu hg19 1 165370516 165370516 + Missense_Mutation SNP G A TCGA-EJ-7791-01 Unknown Somatic WGS Illumina GAIIx FAM78B 149297 broad.mit.edu hg19 1 166039642 166039642 + Missense_Mutation SNP G A TCGA-G9-6363-01 Unknown Somatic WXS Illumina GAIIx GPA33 10223 broad.mit.edu hg19 1 167024285 167024285 + Missense_Mutation SNP A G TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx DUSP27 92235 broad.mit.edu hg19 1 167095421 167095421 + Missense_Mutation SNP C T TCGA-G9-6365-01 Unknown Somatic WGS Illumina GAIIx POU2F1 5451 CPCGene hg19 1 167343365 167343365 + Missense_Mutation SNP G A CPCG0191-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADCY10 55811 broad.mit.edu hg19 1 167823646 167823646 + Missense_Mutation SNP A C TCGA-J4-A67L-01 Unknown Somatic WXS Illumina GAIIx XCL1 6375 broad.mit.edu hg19 1 168549329 168549329 + Missense_Mutation SNP G C TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx NME7 29922 CPCGene hg19 1 169204421 169204421 + Missense_Mutation SNP A G CPCG0191-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC19A2 10560 broad.mit.edu hg19 1 169439315 169439315 + Missense_Mutation SNP G A TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx F5 2153 broad.mit.edu hg19 1 169489881 169489881 + Missense_Mutation SNP C T TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx F5 2153 broad.mit.edu hg19 1 169500178 169500178 + Missense_Mutation SNP G C PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx F5 2153 broad.mit.edu hg19 1 169511343 169511343 + Missense_Mutation SNP C A TCGA-J4-A67T-01 Unknown Somatic WXS Illumina GAIIx F5 2153 broad.mit.edu hg19 1 169511660 169511660 + Missense_Mutation SNP C A P04-2740-Tumor Unknown Somatic WXS Illumina GAIIx SELP 6403 broad.mit.edu hg19 1 169562858 169562858 + Missense_Mutation SNP G A PR-08-2153 Unknown Somatic WGS Illumina GAIIx SELP 6403 broad.mit.edu hg19 1 169582313 169582313 + Missense_Mutation SNP A G TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx KIFAP3 22920 broad.mit.edu hg19 1 169953739 169953739 + Missense_Mutation SNP T C TCGA-EJ-7330-01 Unknown Somatic WXS Illumina GAIIx GORAB 92344 broad.mit.edu hg19 1 170521417 170521417 + Missense_Mutation SNP G T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx PRRX1 5396 broad.mit.edu hg19 1 170688957 170688957 + Missense_Mutation SNP G A TCGA-G9-6384-01 Unknown Somatic WXS Illumina GAIIx PRRX1 5396 broad.mit.edu hg19 1 170705189 170705189 + Missense_Mutation SNP C G PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx MROH9 80133 broad.mit.edu hg19 1 170967465 170967465 + Missense_Mutation SNP C T PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx MROH9 80133 broad.mit.edu hg19 1 171033322 171033322 + Missense_Mutation SNP C T P08-1042 Unknown Somatic WGS Illumina GAIIx FMO1 2326 broad.mit.edu hg19 1 171250000 171250000 + Missense_Mutation SNP T C TCGA-G9-6363-01 Unknown Somatic WXS Illumina GAIIx PRRC2C 23215 broad.mit.edu hg19 1 171560757 171560757 + Missense_Mutation SNP C T TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx ANKRD45 339416 broad.mit.edu hg19 1 173593981 173593981 + Missense_Mutation SNP C G TCGA-EJ-7781-01 Unknown Somatic WXS Illumina GAIIx CENPL 91687 CPCGene hg19 1 173780350 173780350 + Missense_Mutation SNP G A CPCG0057-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPR52 9293 broad.mit.edu hg19 1 174418305 174418305 + Missense_Mutation SNP T C PR-01-2492-Tumor Unknown Somatic WXS Illumina GAIIx TNN 63923 broad.mit.edu hg19 1 175086262 175086262 + Missense_Mutation SNP G A TCGA-G9-6348-01 Unknown Somatic WXS Illumina GAIIx TNR 7143 broad.mit.edu hg19 1 175375396 175375396 + Missense_Mutation SNP C T PR-09-2517-Tumor Unknown Somatic WXS Illumina GAIIx RFWD2 64326 CPCGene hg19 1 176015343 176015343 + Missense_Mutation SNP A T CPCG0357-F1 Unknown Somatic WXS Illumina HiSeq 2500 RFWD2 64326 broad.mit.edu hg19 1 176118147 176118147 + Missense_Mutation SNP T G PR-04-3347-Tumor Unknown Somatic WXS Illumina GAIIx PAPPA2 60676 CPCGene hg19 1 176525699 176525699 + Missense_Mutation SNP C T CPCG0342-F1 Unknown Somatic WXS Illumina HiSeq 2500 PAPPA2 60676 broad.mit.edu hg19 1 176526123 176526123 + Missense_Mutation SNP G A PR-07-4610 Unknown Somatic WGS Illumina GAIIx ASTN1 460 broad.mit.edu hg19 1 176913135 176913135 + Missense_Mutation SNP C T TCGA-G9-6342-01 Unknown Somatic WXS Illumina GAIIx BRINP2 57795 broad.mit.edu hg19 1 177245388 177245388 + Missense_Mutation SNP T C P05-1657 Unknown Somatic WGS Illumina GAIIx BRINP2 57795 CPCGene hg19 1 177247811 177247811 + Missense_Mutation SNP G T CPCG0001-F1 Unknown Somatic WXS Illumina HiSeq 2500 SEC16B 89866 broad.mit.edu hg19 1 177927436 177927436 + Missense_Mutation SNP T A TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx TOR3A 64222 CPCGene hg19 1 179052097 179052097 + Missense_Mutation SNP C G CPCG0255-F1 Unknown Somatic WXS Illumina HiSeq 2500 SOAT1 6646 broad.mit.edu hg19 1 179319495 179319495 + Missense_Mutation SNP A G P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx NPHS2 7827 broad.mit.edu hg19 1 179526351 179526351 + Missense_Mutation SNP G A TCGA-J4-8200-01 Unknown Somatic WXS Illumina GAIIx CEP350 9857 broad.mit.edu hg19 1 180022134 180022134 + Missense_Mutation SNP C T PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx XPR1 9213 broad.mit.edu hg19 1 180793908 180793908 + Missense_Mutation SNP A T TCGA-HC-8256-01 Unknown Somatic WXS Illumina GAIIx KIAA1614 57710 broad.mit.edu hg19 1 180885314 180885314 + Missense_Mutation SNP A G TCGA-EJ-7783-01 Unknown Somatic WXS Illumina GAIIx STX6 10228 broad.mit.edu hg19 1 180945755 180945755 + Missense_Mutation SNP A G PR-03-3125 Unknown Somatic WGS Illumina GAIIx CACNA1E 777 CPCGene hg19 1 181479613 181479613 + Missense_Mutation SNP G A CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 CACNA1E 777 broad.mit.edu hg19 1 181702058 181702058 + Missense_Mutation SNP C T TCGA-HC-7748-01 Unknown Somatic WXS Illumina GAIIx CACNA1E 777 broad.mit.edu hg19 1 181725167 181725167 + Missense_Mutation SNP C T TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx CACNA1E 777 broad.mit.edu hg19 1 181726120 181726120 + Missense_Mutation SNP G A TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx CACNA1E 777 broad.mit.edu hg19 1 181767512 181767512 + Missense_Mutation SNP G A TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx CACNA1E 777 CPCGene hg19 1 181767610 181767610 + Missense_Mutation SNP G A CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF648 127665 broad.mit.edu hg19 1 182026167 182026167 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx RGSL1 353299 broad.mit.edu hg19 1 182499408 182499408 + Missense_Mutation SNP A G P04-1084 Unknown Somatic WGS Illumina GAIIx LAMC1 3915 broad.mit.edu hg19 1 183093828 183093828 + Missense_Mutation SNP G A TCGA-VN-A88N-01 Unknown Somatic WXS Illumina GAIIx LAMC2 3918 broad.mit.edu hg19 1 183204832 183204832 + Missense_Mutation SNP C T PR-2621 Unknown Somatic WGS Illumina GAIIx LAMC2 3918 broad.mit.edu hg19 1 183207488 183207488 + Missense_Mutation SNP C T TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx SMG7 9887 broad.mit.edu hg19 1 183511244 183511244 + Missense_Mutation SNP G T P04-1084 Unknown Somatic WGS Illumina GAIIx NCF2 4688 broad.mit.edu hg19 1 183539961 183539961 + Missense_Mutation SNP A T TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx NCF2 4688 broad.mit.edu hg19 1 183556070 183556070 + Missense_Mutation SNP C G P03-2345 Unknown Somatic WGS Illumina GAIIx IVNS1ABP 10625 broad.mit.edu hg19 1 185267218 185267218 + Missense_Mutation SNP A C TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx HMCN1 83872 broad.mit.edu hg19 1 185984525 185984525 + Missense_Mutation SNP A T PR-07-4610 Unknown Somatic WGS Illumina GAIIx HMCN1 83872 broad.mit.edu hg19 1 185987441 185987441 + Missense_Mutation SNP T C TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx HMCN1 83872 broad.mit.edu hg19 1 186014836 186014836 + Missense_Mutation SNP G T PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx HMCN1 83872 CPCGene hg19 1 186043957 186043957 + Missense_Mutation SNP C T CPCG0078-F1 Unknown Somatic WXS Illumina HiSeq 2500 HMCN1 83872 broad.mit.edu hg19 1 186057780 186057780 + Missense_Mutation SNP G C P03-2620-Tumor Unknown Somatic WXS Illumina GAIIx HMCN1 83872 broad.mit.edu hg19 1 186099650 186099650 + Missense_Mutation SNP T C TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx HMCN1 83872 CPCGene hg19 1 186106992 186106992 + Missense_Mutation SNP C T CPCG0356-F1 Unknown Somatic WXS Illumina HiSeq 2500 HMCN1 83872 broad.mit.edu hg19 1 186158743 186158743 + Missense_Mutation SNP C G P03-2620-Tumor Unknown Somatic WXS Illumina GAIIx PRG4 10216 broad.mit.edu hg19 1 186277867 186277867 + Missense_Mutation SNP A T P08-716 Unknown Somatic WGS Illumina GAIIx PLA2G4A 5321 broad.mit.edu hg19 1 186915868 186915868 + Missense_Mutation SNP T A PR-07-4610 Unknown Somatic WGS Illumina GAIIx BRINP3 339479 broad.mit.edu hg19 1 190067681 190067681 + Missense_Mutation SNP C T TCGA-2A-A8VO-01 Unknown Somatic WXS Illumina GAIIx RGS21 431704 broad.mit.edu hg19 1 192321267 192321267 + Missense_Mutation SNP C T P08-716 Unknown Somatic WGS Illumina GAIIx TROVE2 6738 broad.mit.edu hg19 1 193046080 193046080 + Missense_Mutation SNP A G TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx KCNT2 343450 broad.mit.edu hg19 1 196254844 196254844 + Missense_Mutation SNP C T TCGA-G9-6342-01 Unknown Somatic WXS Illumina GAIIx KCNT2 343450 broad.mit.edu hg19 1 196285089 196285089 + Missense_Mutation SNP T A TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx KCNT2 343450 broad.mit.edu hg19 1 196398768 196398768 + Missense_Mutation SNP C A TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx CFH 3075 CPCGene hg19 1 196643073 196643073 + Missense_Mutation SNP G A CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 CFH 3075 CPCGene hg19 1 196646769 196646769 + Missense_Mutation SNP T G CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 CFH 3075 broad.mit.edu hg19 1 196682970 196682970 + Missense_Mutation SNP A G PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx CFH 3075 EMBL hg19 1 196706610 196706610 + Missense_Mutation SNP A T EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 CFHR3 10878 broad.mit.edu hg19 1 196749096 196749096 + Missense_Mutation SNP C T P04-1084 Unknown Somatic WGS Illumina GAIIx F13B 2165 broad.mit.edu hg19 1 197026561 197026561 + Missense_Mutation SNP G A PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx F13B 2165 broad.mit.edu hg19 1 197030039 197030039 + Missense_Mutation SNP T A TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx CRB1 23418 broad.mit.edu hg19 1 197297963 197297963 + Missense_Mutation SNP C T TCGA-VN-A88N-01 Unknown Somatic WXS Illumina GAIIx CRB1 23418 broad.mit.edu hg19 1 197390342 197390342 + Missense_Mutation SNP G T TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx LHX9 56956 broad.mit.edu hg19 1 197898209 197898209 + Missense_Mutation SNP C T TCGA-VP-A87J-01 Unknown Somatic WXS Illumina GAIIx PTPRC 5788 broad.mit.edu hg19 1 198677295 198677295 + Missense_Mutation SNP A T PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx PTPRC 5788 broad.mit.edu hg19 1 198711392 198711392 + Missense_Mutation SNP G A TCGA-XJ-A83G-01 Unknown Somatic WXS Illumina GAIIx PTPRC 5788 broad.mit.edu hg19 1 198721481 198721481 + Missense_Mutation SNP T C TCGA-J4-A6M7-01 Unknown Somatic WXS Illumina GAIIx KIF14 9928 broad.mit.edu hg19 1 200587742 200587742 + Missense_Mutation SNP T G TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx C1 0 broad.mit.edu hg19 1 200878355 200878355 + Missense_Mutation SNP C T TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx KIF21B 23046 broad.mit.edu hg19 1 200944676 200944676 + Missense_Mutation SNP C T TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx KIF21B 23046 broad.mit.edu hg19 1 200972744 200972744 + Missense_Mutation SNP C T TCGA-G9-6333-01 Unknown Somatic WXS Illumina GAIIx CACNA1S 779 broad.mit.edu hg19 1 201044699 201044699 + Missense_Mutation SNP G C TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx CACNA1S 779 broad.mit.edu hg19 1 201046060 201046060 + Missense_Mutation SNP G A TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx CACNA1S 779 broad.mit.edu hg19 1 201046222 201046222 + Missense_Mutation SNP G A TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx CACNA1S 779 broad.mit.edu hg19 1 201047221 201047221 + Missense_Mutation SNP G A TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx ASCL5 647219 CPCGene hg19 1 201083896 201083896 + Missense_Mutation SNP T A CPCG0412-F1 Unknown Somatic WXS Illumina HiSeq 2500 IGFN1 91156 CPCGene hg19 1 201178174 201178174 + Missense_Mutation SNP C T CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 NAV1 89796 broad.mit.edu hg19 1 201777196 201777196 + Missense_Mutation SNP A C P09-628 Unknown Somatic WGS Illumina GAIIx LGR6 59352 broad.mit.edu hg19 1 202245638 202245638 + Missense_Mutation SNP C T TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx LGR6 59352 broad.mit.edu hg19 1 202269985 202269985 + Missense_Mutation SNP A G P03-1426 Unknown Somatic WGS Illumina GAIIx TMEM183A 92703 CPCGene hg19 1 202977904 202977904 + Missense_Mutation SNP T A CPCG0339-F1 Unknown Somatic WXS Illumina HiSeq 2500 FMOD 2331 broad.mit.edu hg19 1 203316790 203316790 + Missense_Mutation SNP C T TCGA-CH-5738-01 Unknown Somatic WXS Illumina GAIIx ATP2B4 493 CPCGene hg19 1 203672891 203672891 + Missense_Mutation SNP C T CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATP2B4 493 CPCGene hg19 1 203677017 203677017 + Missense_Mutation SNP C T CPCG0334-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATP2B4 493 CPCGene hg19 1 203682316 203682316 + Missense_Mutation SNP G T CPCG0090-F1 Unknown Somatic WXS Illumina HiSeq 2500 LAX1 54900 broad.mit.edu hg19 1 203743607 203743607 + Missense_Mutation SNP T A PR-01-2382-Tumor Unknown Somatic WXS Illumina GAIIx SOX13 9580 broad.mit.edu hg19 1 204083516 204083516 + Missense_Mutation SNP C G PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx PLEKHA6 22874 broad.mit.edu hg19 1 204216548 204216548 + Missense_Mutation SNP G T TCGA-HC-8259-01 Unknown Somatic WXS Illumina GAIIx PIK3C2B 5287 CPCGene hg19 1 204416583 204416583 + Missense_Mutation SNP G T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 MDM4 4194 broad.mit.edu hg19 1 204513667 204513667 + Missense_Mutation SNP T C PR-3051-Tumor Unknown Somatic WXS Illumina GAIIx NFASC 23114 CPCGene hg19 1 204924020 204924020 + Missense_Mutation SNP C T CPCG0380-F1 Unknown Somatic WXS Illumina HiSeq 2500 DSTYK 25778 broad.mit.edu hg19 1 205126469 205126469 + Missense_Mutation SNP C T TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx KLHDC8A 55220 EMBL hg19 1 205312475 205312475 + Missense_Mutation SNP G A EOPC-07 Unknown Somatic WGS Illumina HiSeq2000 SLC45A3 85414 broad.mit.edu hg19 1 205632719 205632719 + Missense_Mutation SNP C G PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx NUCKS1 64710 CPCGene hg19 1 205687499 205687499 + Missense_Mutation SNP C G CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC41A1 254428 broad.mit.edu hg19 1 205768182 205768182 + Missense_Mutation SNP G T TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx SLC26A9 115019 broad.mit.edu hg19 1 205897957 205897957 + Missense_Mutation SNP G A TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx SLC26A9 115019 CPCGene hg19 1 205899083 205899083 + Missense_Mutation SNP C T CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 IL10 3586 broad.mit.edu hg19 1 206944256 206944256 + Missense_Mutation SNP C T TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx IL24 11009 broad.mit.edu hg19 1 207072689 207072689 + Missense_Mutation SNP G A TCGA-VP-A87J-01 Unknown Somatic WXS Illumina GAIIx FCAMR 83953 broad.mit.edu hg19 1 207133044 207133044 + Missense_Mutation SNP T C TCGA-G9-6363-01 Unknown Somatic WXS Illumina GAIIx CR2 1380 CPCGene hg19 1 207643284 207643284 + Missense_Mutation SNP C A CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 CR1 1378 broad.mit.edu hg19 1 207785143 207785143 + Missense_Mutation SNP G A PR-03-3125 Unknown Somatic WGS Illumina GAIIx CR1L 1379 CPCGene hg19 1 207870897 207870897 + Missense_Mutation SNP C A CPCG0184-F1 Unknown Somatic WXS Illumina HiSeq 2500 CD46 4179 broad.mit.edu hg19 1 207932991 207932991 + Missense_Mutation SNP T G TCGA-CH-5740-01 Unknown Somatic WXS Illumina GAIIx CD46 4179 broad.mit.edu hg19 1 207940420 207940420 + Missense_Mutation SNP T A TCGA-EJ-7123-01 Unknown Somatic WXS Illumina GAIIx PLXNA2 5362 broad.mit.edu hg19 1 208272307 208272307 + Missense_Mutation SNP G A TCGA-G9-6384-01 Unknown Somatic WXS Illumina GAIIx TRAF3IP3 80342 broad.mit.edu hg19 1 209948722 209948722 + Missense_Mutation SNP T A TCGA-EJ-5517-01 Unknown Somatic WXS Illumina GAIIx KCNH1 3756 broad.mit.edu hg19 1 210977309 210977309 + Missense_Mutation SNP C A TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx FLVCR1 28982 broad.mit.edu hg19 1 213032441 213032441 + Missense_Mutation SNP T G TCGA-EJ-7325-01 Unknown Somatic WXS Illumina GAIIx CENPF 1063 broad.mit.edu hg19 1 214818372 214818372 + Missense_Mutation SNP C T PR-03-3125 Unknown Somatic WGS Illumina GAIIx KCNK2 3776 broad.mit.edu hg19 1 215368303 215368303 + Missense_Mutation SNP C T TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx USH2A 7399 broad.mit.edu hg19 1 216246269 216246269 + Missense_Mutation SNP A G TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx USH2A 7399 broad.mit.edu hg19 1 216371806 216371806 + Missense_Mutation SNP G A TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx SLC30A10 55532 broad.mit.edu hg19 1 220091782 220091782 + Missense_Mutation SNP G A TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx BPNT1 10380 broad.mit.edu hg19 1 220232234 220232234 + Missense_Mutation SNP G A P08-716 Unknown Somatic WGS Illumina GAIIx IARS2 55699 broad.mit.edu hg19 1 220273972 220273972 + Missense_Mutation SNP T C TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx IARS2 55699 broad.mit.edu hg19 1 220313581 220313581 + Missense_Mutation SNP G A P05-620 Unknown Somatic WGS Illumina GAIIx RAB3GAP2 25782 broad.mit.edu hg19 1 220324950 220324950 + Missense_Mutation SNP T C P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx MIA3 375056 broad.mit.edu hg19 1 222833531 222833531 + Missense_Mutation SNP A G TCGA-2A-A8W1-01 Unknown Somatic WXS Illumina GAIIx BROX 148362 CPCGene hg19 1 222904729 222904729 + Missense_Mutation SNP A G CPCG0123-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCDC185 164127 broad.mit.edu hg19 1 223566906 223566906 + Missense_Mutation SNP G A TCGA-EJ-7327-01 Unknown Somatic WXS Illumina GAIIx CCDC185 164127 CPCGene hg19 1 223568603 223568603 + Missense_Mutation SNP G A CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 JMJD4 65094 broad.mit.edu hg19 1 227920349 227920349 + Missense_Mutation SNP T G TCGA-G9-6363-01 Unknown Somatic WXS Illumina GAIIx OBSCN 84033 broad.mit.edu hg19 1 228509429 228509429 + Missense_Mutation SNP C T PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx OBSCN 84033 broad.mit.edu hg19 1 228558822 228558822 + Missense_Mutation SNP C A TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx OBSCN 84033 broad.mit.edu hg19 1 228559495 228559495 + Missense_Mutation SNP C T PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx HIST3H3 8290 broad.mit.edu hg19 1 228612878 228612878 + Missense_Mutation SNP C T PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx RHOU 58480 CPCGene hg19 1 228879333 228879333 + Missense_Mutation SNP A G CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 RAB4A 5867 CPCGene hg19 1 229422292 229422292 + Missense_Mutation SNP C T CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 NUP133 55746 broad.mit.edu hg19 1 229577702 229577702 + Missense_Mutation SNP G A TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx ABCB10 23456 broad.mit.edu hg19 1 229685110 229685110 + Missense_Mutation SNP C A PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx URB2 9816 broad.mit.edu hg19 1 229771856 229771856 + Missense_Mutation SNP C T TCGA-EJ-7314-01 Unknown Somatic WXS Illumina GAIIx EXOC8 149371 broad.mit.edu hg19 1 231472383 231472383 + Missense_Mutation SNP T A P05-3852 Unknown Somatic WGS Illumina GAIIx SIPA1L2 57568 EMBL hg19 1 232619633 232619633 + Missense_Mutation SNP G A EOPC-04 Unknown Somatic WGS Illumina HiSeq2000 PCNXL2 0 CPCGene hg19 1 233275585 233275585 + Missense_Mutation SNP C T CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 TARBP1 6894 broad.mit.edu hg19 1 234529433 234529433 + Missense_Mutation SNP A C PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx RBM34 23029 CPCGene hg19 1 235295296 235295296 + Missense_Mutation SNP T G CPCG0238-F1 Unknown Somatic WXS Illumina HiSeq 2500 GGPS1 9453 broad.mit.edu hg19 1 235505067 235505067 + Missense_Mutation SNP C T TCGA-EJ-7325-01 Unknown Somatic WXS Illumina GAIIx NID1 4811 broad.mit.edu hg19 1 236154305 236154305 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx NID1 4811 broad.mit.edu hg19 1 236156998 236156998 + Missense_Mutation SNP C T TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx NID1 4811 broad.mit.edu hg19 1 236195871 236195871 + Missense_Mutation SNP G C PR-2761-Tumor Unknown Somatic WXS Illumina GAIIx ACTN2 88 broad.mit.edu hg19 1 236898999 236898999 + Missense_Mutation SNP C T PR-04-639-Tumor Unknown Somatic WXS Illumina GAIIx MTR 4548 CPCGene hg19 1 236973876 236973876 + Missense_Mutation SNP G T CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 RYR2 6262 broad.mit.edu hg19 1 237608788 237608788 + Missense_Mutation SNP C T TCGA-J4-8200-01 Unknown Somatic WXS Illumina GAIIx RYR2 6262 broad.mit.edu hg19 1 237754210 237754210 + Missense_Mutation SNP G T TCGA-EJ-7784-01 Unknown Somatic WXS Illumina GAIIx RYR2 6262 broad.mit.edu hg19 1 237796915 237796915 + Missense_Mutation SNP G A TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx RYR2 6262 broad.mit.edu hg19 1 237813234 237813234 + Missense_Mutation SNP G A TCGA-EJ-7315-01 Unknown Somatic WXS Illumina GAIIx RYR2 6262 broad.mit.edu hg19 1 237813287 237813287 + Missense_Mutation SNP C T P08-492 Unknown Somatic WGS Illumina GAIIx RYR2 6262 CPCGene hg19 1 237821291 237821291 + Missense_Mutation SNP A T CPCG0354-F1 Unknown Somatic WXS Illumina HiSeq 2500 RYR2 6262 broad.mit.edu hg19 1 237893572 237893572 + Missense_Mutation SNP C T TCGA-EJ-7325-01 Unknown Somatic WXS Illumina GAIIx RYR2 6262 broad.mit.edu hg19 1 237923150 237923150 + Missense_Mutation SNP T C TCGA-VN-A88L-01 Unknown Somatic WXS Illumina GAIIx RYR2 6262 CPCGene hg19 1 237947920 237947920 + Missense_Mutation SNP G C CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 RYR2 6262 CPCGene hg19 1 237957188 237957188 + Missense_Mutation SNP C T CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 RYR2 6262 broad.mit.edu hg19 1 237957207 237957207 + Missense_Mutation SNP G A TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx RYR2 6262 broad.mit.edu hg19 1 237982395 237982395 + Missense_Mutation SNP C T TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx FMN2 56776 broad.mit.edu hg19 1 240370409 240370409 + Missense_Mutation SNP G A P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx FMN2 56776 broad.mit.edu hg19 1 240371075 240371075 + Missense_Mutation SNP C T TCGA-G9-6333-01 Unknown Somatic WXS Illumina GAIIx RGS7 6000 broad.mit.edu hg19 1 240964781 240964781 + Missense_Mutation SNP A T PR-06-3199 Unknown Somatic WGS Illumina GAIIx FH 2271 broad.mit.edu hg19 1 241669308 241669308 + Missense_Mutation SNP A T TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx WDR64 128025 CPCGene hg19 1 241920733 241920733 + Missense_Mutation SNP T C CPCG0268-F1 Unknown Somatic WXS Illumina HiSeq 2500 BECN1P1 0 broad.mit.edu hg19 1 242121374 242121374 + Missense_Mutation SNP C A P09-37 Unknown Somatic WGS Illumina GAIIx KIF26B 55083 broad.mit.edu hg19 1 245849659 245849659 + Missense_Mutation SNP G A PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx NLRP3 114548 broad.mit.edu hg19 1 247587725 247587725 + Missense_Mutation SNP G A PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx OR11L1 391189 broad.mit.edu hg19 1 248004290 248004290 + Missense_Mutation SNP C A TCGA-CH-5740-01 Unknown Somatic WXS Illumina GAIIx OR2W3 343171 broad.mit.edu hg19 1 248059080 248059080 + Missense_Mutation SNP C T PR-04-1243 Unknown Somatic WGS Illumina GAIIx OR2L2 26246 CPCGene hg19 1 248201901 248201901 + Missense_Mutation SNP G A CPCG0184-F1 Unknown Somatic WXS Illumina HiSeq 2500 OR2L2 26246 broad.mit.edu hg19 1 248201938 248201938 + Missense_Mutation SNP G T TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx OR2M5 127059 broad.mit.edu hg19 1 248309150 248309150 + Missense_Mutation SNP G A P08-1541 Unknown Somatic WGS Illumina GAIIx OR2M5 127059 CPCGene hg19 1 248309230 248309230 + Missense_Mutation SNP C T CPCG0362-F1 Unknown Somatic WXS Illumina HiSeq 2500 OR2T4 127074 CPCGene hg19 1 248525193 248525193 + Missense_Mutation SNP C T CPCG0184-F1 Unknown Somatic WXS Illumina HiSeq 2500 OR2G6 391211 broad.mit.edu hg19 1 248685655 248685655 + Missense_Mutation SNP G C TCGA-G9-6385-01 Unknown Somatic WXS Illumina GAIIx SH3BP5L 80851 broad.mit.edu hg19 1 249118997 249118997 + Missense_Mutation SNP G T TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx ZNF692 55657 CPCGene hg19 1 249151603 249151603 + Missense_Mutation SNP C T CPCG0413-F1 Unknown Somatic WXS Illumina HiSeq 2500 TUBB8 347688 broad.mit.edu hg19 10 93287 93287 + Missense_Mutation SNP C A TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx DIP2C 22982 broad.mit.edu hg19 10 408505 408505 + Missense_Mutation SNP G A TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx LARP4B 23185 broad.mit.edu hg19 10 888969 888969 + Missense_Mutation SNP C A TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx GTPBP4 23560 broad.mit.edu hg19 10 1044996 1044996 + Missense_Mutation SNP G A TCGA-2A-A8VO-01 Unknown Somatic WXS Illumina GAIIx ADARB2 105 broad.mit.edu hg19 10 1279682 1279682 + Missense_Mutation SNP G C P09-2497-Tumor Unknown Somatic WXS Illumina GAIIx PFKP 5214 CPCGene hg19 10 3146034 3146034 + Missense_Mutation SNP C G CPCG0241-F1 Unknown Somatic WXS Illumina HiSeq 2500 PITRM1 10531 broad.mit.edu hg19 10 3208477 3208477 + Missense_Mutation SNP T C TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx FAM208B 54906 CPCGene hg19 10 5803270 5803270 + Missense_Mutation SNP A C CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 ITIH2 3698 broad.mit.edu hg19 10 7751115 7751115 + Missense_Mutation SNP T A TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx KIN 22944 broad.mit.edu hg19 10 7808017 7808017 + Missense_Mutation SNP G T TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx KIN 22944 broad.mit.edu hg19 10 7822139 7822139 + Missense_Mutation SNP T G TCGA-G9-6338-01 Unknown Somatic WXS Illumina GAIIx CELF2 10659 broad.mit.edu hg19 10 11330491 11330491 + Missense_Mutation SNP G A TCGA-EJ-5522-01 Unknown Somatic WXS Illumina GAIIx CELF2 10659 broad.mit.edu hg19 10 11363245 11363245 + Missense_Mutation SNP C T P08-5852 Unknown Somatic WGS Illumina GAIIx ECHDC3 79746 CPCGene hg19 10 11784737 11784737 + Missense_Mutation SNP C T CPCG0183-F1 Unknown Somatic WXS Illumina HiSeq 2500 SEPHS1 22929 broad.mit.edu hg19 10 13375855 13375855 + Missense_Mutation SNP T C TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx FAM107B 83641 EMBL hg19 10 14564011 14564011 + Missense_Mutation SNP C A EOPC-06 Unknown Somatic WGS Illumina HiSeq2000 OLAH 55301 broad.mit.edu hg19 10 15103733 15103733 + Missense_Mutation SNP A G TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx RPP38 10557 broad.mit.edu hg19 10 15145358 15145358 + Missense_Mutation SNP G A TCGA-EJ-7330-01 Unknown Somatic WXS Illumina GAIIx FAM171A1 221061 broad.mit.edu hg19 10 15255388 15255388 + Missense_Mutation SNP G A P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx FAM171A1 221061 broad.mit.edu hg19 10 15317865 15317865 + Missense_Mutation SNP G A TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx ITGA8 8516 broad.mit.edu hg19 10 15590512 15590512 + Missense_Mutation SNP C G TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx C1QL3 389941 broad.mit.edu hg19 10 16562941 16562941 + Missense_Mutation SNP T A TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx CUBN 8029 broad.mit.edu hg19 10 16870840 16870840 + Missense_Mutation SNP G A PR-STID0000003127 Unknown Somatic WGS Illumina GAIIx ST8SIA6 338596 broad.mit.edu hg19 10 17365107 17365107 + Missense_Mutation SNP T C TCGA-G9-6338-01 Unknown Somatic WXS Illumina GAIIx MALRD1 340895 CPCGene hg19 10 19464193 19464193 + Missense_Mutation SNP C A CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 MALRD1 340895 CPCGene hg19 10 19612923 19612923 + Missense_Mutation SNP G A CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 NEBL 10529 broad.mit.edu hg19 10 21158736 21158736 + Missense_Mutation SNP G A TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx SKIDA1 387640 broad.mit.edu hg19 10 21805058 21805058 + Missense_Mutation SNP T A TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx MLLT10 8028 CPCGene hg19 10 22019968 22019968 + Missense_Mutation SNP G T CPCG0184-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARMC3 219681 broad.mit.edu hg19 10 23287302 23287302 + Missense_Mutation SNP G A TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx KIAA1217 56243 broad.mit.edu hg19 10 24508665 24508665 + Missense_Mutation SNP C T TCGA-G9-6365-01 Unknown Somatic WGS Illumina GAIIx ARHGAP21 57584 broad.mit.edu hg19 10 24880205 24880205 + Missense_Mutation SNP G T TCGA-2A-A8W1-01 Unknown Somatic WXS Illumina GAIIx ARHGAP21 57584 CPCGene hg19 10 24883961 24883961 + Missense_Mutation SNP T C CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPR158 57512 broad.mit.edu hg19 10 25886824 25886824 + Missense_Mutation SNP C T PR-05-839-Tumor Unknown Somatic WXS Illumina GAIIx GPR158 57512 broad.mit.edu hg19 10 25887029 25887029 + Missense_Mutation SNP G A TCGA-VN-A88N-01 Unknown Somatic WXS Illumina GAIIx GPR158 57512 broad.mit.edu hg19 10 25887198 25887198 + Missense_Mutation SNP C T TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx GPR158 57512 broad.mit.edu hg19 10 25887337 25887337 + Missense_Mutation SNP C T P07-5037 Unknown Somatic WGS Illumina GAIIx MYO3A 53904 broad.mit.edu hg19 10 26443696 26443696 + Missense_Mutation SNP C T PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx MYO3A 53904 CPCGene hg19 10 26463138 26463138 + Missense_Mutation SNP G T CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 GAD2 2572 CPCGene hg19 10 26558081 26558081 + Missense_Mutation SNP G T CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 GAD2 2572 broad.mit.edu hg19 10 26575312 26575312 + Missense_Mutation SNP C G TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx ANKRD26 22852 CPCGene hg19 10 27306535 27306535 + Missense_Mutation SNP T C CPCG0413-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANKRD26 22852 broad.mit.edu hg19 10 27381415 27381415 + Missense_Mutation SNP T A TCGA-J4-8200-01 Unknown Somatic WXS Illumina GAIIx MASTL 84930 EMBL hg19 10 27454439 27454439 + Missense_Mutation SNP C T EOPC-04 Unknown Somatic WGS Illumina HiSeq2000 MKX 283078 CPCGene hg19 10 28032317 28032317 + Missense_Mutation SNP T A CPCG0366-F1 Unknown Somatic WXS Illumina HiSeq 2500 WAC 51322 CPCGene hg19 10 28822510 28822510 + Missense_Mutation SNP T A CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIAA1462 57608 broad.mit.edu hg19 10 30306821 30306821 + Missense_Mutation SNP C G TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx MAP3K8 1326 broad.mit.edu hg19 10 30739283 30739283 + Missense_Mutation SNP G A TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx ZNF438 220929 broad.mit.edu hg19 10 31133925 31133925 + Missense_Mutation SNP C G TCGA-EJ-5512-01 Unknown Somatic WXS Illumina GAIIx ZNF438 220929 broad.mit.edu hg19 10 31137935 31137935 + Missense_Mutation SNP C G P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx ZEB1 6935 broad.mit.edu hg19 10 31809478 31809478 + Missense_Mutation SNP A G TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx ZEB1 6935 broad.mit.edu hg19 10 31815612 31815612 + Missense_Mutation SNP A G TCGA-J4-A83M-01 Unknown Somatic WXS Illumina GAIIx ITGB1 3688 CPCGene hg19 10 33208941 33208941 + Missense_Mutation SNP A C CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 CREM 1390 broad.mit.edu hg19 10 35500241 35500241 + Missense_Mutation SNP G A TCGA-CH-5738-01 Unknown Somatic WXS Illumina GAIIx ANKRD30A 91074 broad.mit.edu hg19 10 37430910 37430910 + Missense_Mutation SNP C T P08-501 Unknown Somatic WGS Illumina GAIIx ANKRD30A 91074 CPCGene hg19 10 37451757 37451757 + Missense_Mutation SNP T A CPCG0237-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF33A 7581 broad.mit.edu hg19 10 38345420 38345420 + Missense_Mutation SNP A T TCGA-G9-6363-01 Unknown Somatic WXS Illumina GAIIx ZNF37A 7587 broad.mit.edu hg19 10 38406710 38406710 + Missense_Mutation SNP G T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx RASGEF1A 221002 broad.mit.edu hg19 10 43696237 43696237 + Missense_Mutation SNP G A TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx HNRNPF 3185 broad.mit.edu hg19 10 43882502 43882502 + Missense_Mutation SNP G A TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx ZNF485 220992 broad.mit.edu hg19 10 44112021 44112021 + Missense_Mutation SNP A G TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx RASSF4 83937 broad.mit.edu hg19 10 45486499 45486499 + Missense_Mutation SNP C T PR-08-556 Unknown Somatic WGS Illumina GAIIx SYT15 83849 broad.mit.edu hg19 10 46965122 46965122 + Missense_Mutation SNP G T P07-5021 Unknown Somatic WGS Illumina GAIIx GPRIN2 9721 broad.mit.edu hg19 10 46999867 46999867 + Missense_Mutation SNP G T TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx LOC100996758 0 broad.mit.edu hg19 10 47087078 47087078 + Missense_Mutation SNP G T TCGA-HC-7750-01 Unknown Somatic WXS Illumina GAIIx LOC100996758 0 broad.mit.edu hg19 10 47087501 47087501 + Missense_Mutation SNP C T P05-620 Unknown Somatic WGS Illumina GAIIx LOC100996758 0 broad.mit.edu hg19 10 47087501 47087501 + Missense_Mutation SNP C T TCGA-EJ-5501-01 Unknown Somatic WXS Illumina GAIIx LOC100996758 0 broad.mit.edu hg19 10 47087501 47087501 + Missense_Mutation SNP C T TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx LOC100996758 0 broad.mit.edu hg19 10 47087501 47087501 + Missense_Mutation SNP C T PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx LOC100996758 0 broad.mit.edu hg19 10 47087501 47087501 + Missense_Mutation SNP C T TCGA-EJ-5502-01 Unknown Somatic WXS Illumina GAIIx LOC100996758 0 broad.mit.edu hg19 10 47087501 47087501 + Missense_Mutation SNP C T P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx RBP3 5949 broad.mit.edu hg19 10 48388506 48388506 + Missense_Mutation SNP G A P03-2345 Unknown Somatic WGS Illumina GAIIx GDF10 2662 broad.mit.edu hg19 10 48429243 48429243 + Missense_Mutation SNP G A P07-5037 Unknown Somatic WGS Illumina GAIIx FRMPD2 143162 broad.mit.edu hg19 10 49457141 49457141 + Missense_Mutation SNP G T TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx ARHGAP22 58504 broad.mit.edu hg19 10 49791063 49791063 + Missense_Mutation SNP G A TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx WDFY4 57705 CPCGene hg19 10 50038918 50038918 + Missense_Mutation SNP C A CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 WDFY4 57705 CPCGene hg19 10 50149860 50149860 + Missense_Mutation SNP C T CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 ERCC6 2074 CPCGene hg19 10 50667133 50667133 + Missense_Mutation SNP G A CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 ERCC6-PGBD3 0 EMBL hg19 10 50723399 50723399 + Missense_Mutation SNP C T EOPC-11 Unknown Somatic WGS Illumina HiSeq2000 CHAT 1103 broad.mit.edu hg19 10 50833608 50833608 + Missense_Mutation SNP G A PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx CHAT 1103 broad.mit.edu hg19 10 50835782 50835782 + Missense_Mutation SNP G A TCGA-HC-7740-01 Unknown Somatic WGS Illumina GAIIx OGDHL 55753 EMBL hg19 10 50946001 50946001 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 A1CF 29974 broad.mit.edu hg19 10 52573721 52573721 + Missense_Mutation SNP C G TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx A1CF 29974 broad.mit.edu hg19 10 52575861 52575861 + Missense_Mutation SNP G T P03-1426 Unknown Somatic WGS Illumina GAIIx A1CF 29974 broad.mit.edu hg19 10 52595854 52595854 + Missense_Mutation SNP G A TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx PCDH15 65217 CPCGene hg19 10 55568568 55568568 + Missense_Mutation SNP C T CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDH15 65217 CPCGene hg19 10 55581628 55581628 + Missense_Mutation SNP G A CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDH15 65217 broad.mit.edu hg19 10 55581950 55581950 + Missense_Mutation SNP C T PR-3043 Unknown Somatic WGS Illumina GAIIx PCDH15 65217 broad.mit.edu hg19 10 55587260 55587260 + Missense_Mutation SNP G C TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx PCDH15 65217 broad.mit.edu hg19 10 55587261 55587261 + Missense_Mutation SNP G T TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx PCDH15 65217 broad.mit.edu hg19 10 55591182 55591182 + Missense_Mutation SNP C A TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx PCDH15 65217 CPCGene hg19 10 55849820 55849820 + Missense_Mutation SNP T G CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDH15 65217 CPCGene hg19 10 56424016 56424016 + Missense_Mutation SNP G A CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 IPMK 253430 broad.mit.edu hg19 10 59975932 59975932 + Missense_Mutation SNP T C TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx CISD1 55847 CPCGene hg19 10 60029053 60029053 + Missense_Mutation SNP C A CPCG0210-F1 Unknown Somatic WXS Illumina HiSeq 2500 PHYHIPL 84457 broad.mit.edu hg19 10 60994191 60994191 + Missense_Mutation SNP T C TCGA-HC-7736-01 Unknown Somatic WXS Illumina GAIIx ANK3 288 broad.mit.edu hg19 10 61830119 61830119 + Missense_Mutation SNP C T TCGA-2A-A8VO-01 Unknown Somatic WXS Illumina GAIIx RTKN2 219790 broad.mit.edu hg19 10 63959566 63959566 + Missense_Mutation SNP C T TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx JMJD1C 221037 broad.mit.edu hg19 10 64968222 64968222 + Missense_Mutation SNP A G TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx JMJD1C 221037 CPCGene hg19 10 64973749 64973749 + Missense_Mutation SNP A C CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 CTNNA3 29119 broad.mit.edu hg19 10 67680276 67680276 + Missense_Mutation SNP G A TCGA-G9-6333-01 Unknown Somatic WXS Illumina GAIIx CTNNA3 29119 broad.mit.edu hg19 10 67862966 67862966 + Missense_Mutation SNP T C P05-1657 Unknown Somatic WGS Illumina GAIIx LRRTM3 347731 broad.mit.edu hg19 10 68687318 68687318 + Missense_Mutation SNP A G P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx RUFY2 55680 CPCGene hg19 10 70123764 70123764 + Missense_Mutation SNP G A CPCG0341-F1 Unknown Somatic WXS Illumina HiSeq 2500 DNA2 1763 CPCGene hg19 10 70204797 70204797 + Missense_Mutation SNP G A CPCG0410-F1 Unknown Somatic WXS Illumina HiSeq 2500 TET1 80312 broad.mit.edu hg19 10 70446226 70446226 + Missense_Mutation SNP G A TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx STOX1 219736 broad.mit.edu hg19 10 70644798 70644798 + Missense_Mutation SNP C T PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx SUPV3L1 6832 CPCGene hg19 10 70956767 70956767 + Missense_Mutation SNP T G CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 TSPAN15 23555 broad.mit.edu hg19 10 71264232 71264232 + Missense_Mutation SNP C T TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx SAR1A 56681 CPCGene hg19 10 71912313 71912313 + Missense_Mutation SNP G T CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 NODAL 4838 CPCGene hg19 10 72201335 72201335 + Missense_Mutation SNP C T CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 PALD1 27143 CPCGene hg19 10 72292824 72292824 + Missense_Mutation SNP C T CPCG0213-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRF1 5551 broad.mit.edu hg19 10 72357974 72357974 + Missense_Mutation SNP G A PR-09-3566-Tumor Unknown Somatic WXS Illumina GAIIx UNC5B 219699 broad.mit.edu hg19 10 73047379 73047379 + Missense_Mutation SNP C T TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx C10 0 broad.mit.edu hg19 10 73511557 73511557 + Missense_Mutation SNP C T PR-04-1243 Unknown Somatic WGS Illumina GAIIx CDH23 64072 broad.mit.edu hg19 10 73544680 73544680 + Missense_Mutation SNP C T TCGA-J4-A67S-01 Unknown Somatic WXS Illumina GAIIx CDH23 64072 CPCGene hg19 10 73560497 73560497 + Missense_Mutation SNP C T CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 CDH23 64072 broad.mit.edu hg19 10 73574941 73574941 + Missense_Mutation SNP A C TCGA-FC-7708-01 Unknown Somatic WXS Illumina GAIIx CHST3 9469 broad.mit.edu hg19 10 73767311 73767311 + Missense_Mutation SNP C T TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx SPOCK2 9806 CPCGene hg19 10 73822622 73822622 + Missense_Mutation SNP C T CPCG0366-F1 Unknown Somatic WXS Illumina HiSeq 2500 DDIT4 54541 CPCGene hg19 10 74034565 74034565 + Missense_Mutation SNP G C CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 MICU1 10367 broad.mit.edu hg19 10 74128038 74128038 + Missense_Mutation SNP T C TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx MICU1 10367 broad.mit.edu hg19 10 74135571 74135571 + Missense_Mutation SNP C G TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx AP3M1 26985 CPCGene hg19 10 75888867 75888867 + Missense_Mutation SNP T G CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 KAT6B 23522 broad.mit.edu hg19 10 76735743 76735743 + Missense_Mutation SNP A T TCGA-HC-7820-01 Unknown Somatic WXS Illumina GAIIx KAT6B 23522 broad.mit.edu hg19 10 76780983 76780983 + Missense_Mutation SNP G A PR-09-5446-Tumor Unknown Somatic WXS Illumina GAIIx KAT6B 23522 broad.mit.edu hg19 10 76790668 76790668 + Missense_Mutation SNP G T P09-1580-Tumor Unknown Somatic WXS Illumina GAIIx DUSP13 51207 broad.mit.edu hg19 10 76854507 76854507 + Missense_Mutation SNP C T TCGA-EJ-5530-01 Unknown Somatic WXS Illumina GAIIx DLG5 9231 broad.mit.edu hg19 10 79588706 79588706 + Missense_Mutation SNP G A TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx DLG5 9231 broad.mit.edu hg19 10 79593769 79593769 + Missense_Mutation SNP G A PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx FAM213A 84293 broad.mit.edu hg19 10 82185669 82185669 + Missense_Mutation SNP C T TCGA-EJ-5509-01 Unknown Somatic WXS Illumina GAIIx NRG3 10718 broad.mit.edu hg19 10 84733618 84733618 + Missense_Mutation SNP A G PR-05-839-Tumor Unknown Somatic WXS Illumina GAIIx CDHR1 92211 broad.mit.edu hg19 10 85961671 85961671 + Missense_Mutation SNP G A TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx LRIT2 340745 broad.mit.edu hg19 10 85981837 85981837 + Missense_Mutation SNP G A TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx LRIT1 26103 CPCGene hg19 10 86001155 86001155 + Missense_Mutation SNP G A CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 GRID1 2894 broad.mit.edu hg19 10 87484145 87484145 + Missense_Mutation SNP C T PR-06-1749 Unknown Somatic WGS Illumina GAIIx GRID1 2894 broad.mit.edu hg19 10 87484336 87484336 + Missense_Mutation SNP A T TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx GRID1 2894 broad.mit.edu hg19 10 87628819 87628819 + Missense_Mutation SNP C T TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx GRID1 2894 CPCGene hg19 10 87966288 87966288 + Missense_Mutation SNP C T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 WAPAL 0 broad.mit.edu hg19 10 88232463 88232463 + Missense_Mutation SNP G A TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx LDB3 11155 broad.mit.edu hg19 10 88447004 88447004 + Missense_Mutation SNP C T TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx PTEN 5728 broad.mit.edu hg19 10 89690802 89690802 + Splice_Site SNP G A TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx PTEN 5728 broad.mit.edu hg19 10 89692871 89692871 + Missense_Mutation SNP G T TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx PTEN 5728 broad.mit.edu hg19 10 89692900 89692900 + Missense_Mutation SNP G C P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx PTEN 5728 CPCGene hg19 10 89692961 89692961 + Missense_Mutation SNP C T CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 PTEN 5728 broad.mit.edu hg19 10 89720813 89720813 + Missense_Mutation SNP A G P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx STAMBPL1 57559 CPCGene hg19 10 90665267 90665267 + Missense_Mutation SNP T C CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 IFIT2 3433 CPCGene hg19 10 91066464 91066464 + Missense_Mutation SNP C T CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC16A12 387700 EMBL hg19 10 91192882 91192882 + Missense_Mutation SNP T C EOPC-10 Unknown Somatic WGS Illumina HiSeq2000 RPP30 10556 broad.mit.edu hg19 10 92631780 92631780 + Missense_Mutation SNP T C P00-000450-Tumor Unknown Somatic WXS Illumina GAIIx ANKRD1 27063 CPCGene hg19 10 92677580 92677580 + Missense_Mutation SNP C G CPCG0003-F1 Unknown Somatic WXS Illumina HiSeq 2500 HECTD2 143279 broad.mit.edu hg19 10 93253266 93253266 + Splice_Site SNP G A TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx TNKS2 80351 broad.mit.edu hg19 10 93590750 93590750 + Missense_Mutation SNP A G PR-2761-Tumor Unknown Somatic WXS Illumina GAIIx IDE 3416 CPCGene hg19 10 94250316 94250316 + Missense_Mutation SNP A G CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIF11 3832 broad.mit.edu hg19 10 94390060 94390060 + Missense_Mutation SNP A G TCGA-G9-6336-01 Unknown Somatic WGS Illumina GAIIx KIF11 3832 CPCGene hg19 10 94399565 94399565 + Missense_Mutation SNP A G CPCG0355-F1 Unknown Somatic WXS Illumina HiSeq 2500 MYOF 26509 broad.mit.edu hg19 10 95070306 95070306 + Missense_Mutation SNP T A TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx MYOF 26509 broad.mit.edu hg19 10 95089443 95089443 + Missense_Mutation SNP C T TCGA-HC-7075-01 Unknown Somatic WGS Illumina GAIIx FFAR4 338557 broad.mit.edu hg19 10 95326921 95326921 + Missense_Mutation SNP G T TCGA-G9-6371-01 Unknown Somatic WXS Illumina GAIIx PDE6C 5146 broad.mit.edu hg19 10 95405746 95405746 + Missense_Mutation SNP G C TCGA-EJ-7785-01 Unknown Somatic WXS Illumina GAIIx ACSM6 142827 CPCGene hg19 10 96988453 96988453 + Missense_Mutation SNP G T CPCG0259-F1 Unknown Somatic WXS Illumina HiSeq 2500 SORBS1 10580 broad.mit.edu hg19 10 97074853 97074853 + Missense_Mutation SNP G C TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx ALDH18A1 5832 broad.mit.edu hg19 10 97380889 97380889 + Missense_Mutation SNP G A TCGA-EJ-7330-01 Unknown Somatic WXS Illumina GAIIx C10 0 broad.mit.edu hg19 10 98742781 98742781 + Missense_Mutation SNP G A PR-03-3125 Unknown Somatic WGS Illumina GAIIx SLIT1 6585 broad.mit.edu hg19 10 98761035 98761035 + Missense_Mutation SNP G A TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx SLIT1 6585 EMBL hg19 10 98766294 98766294 + Missense_Mutation SNP A T EOPC-04 Unknown Somatic WGS Illumina HiSeq2000 ZDHHC16 84287 CPCGene hg19 10 99216547 99216547 + Missense_Mutation SNP C T CPCG0413-F1 Unknown Somatic WXS Illumina HiSeq 2500 MARVELD1 83742 CPCGene hg19 10 99473954 99473954 + Missense_Mutation SNP G T CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZFYVE27 118813 broad.mit.edu hg19 10 99502873 99502873 + Missense_Mutation SNP T G TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx CRTAC1 55118 broad.mit.edu hg19 10 99642555 99642555 + Missense_Mutation SNP C A TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx PYROXD2 84795 broad.mit.edu hg19 10 100159931 100159931 + Missense_Mutation SNP C A P09-1372-Tumor Unknown Somatic WXS Illumina GAIIx HPS1 3257 broad.mit.edu hg19 10 100177455 100177455 + Missense_Mutation SNP G A TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx HPSE2 60495 CPCGene hg19 10 100992202 100992202 + Missense_Mutation SNP G A CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 CNNM1 26507 broad.mit.edu hg19 10 101150121 101150121 + Missense_Mutation SNP C T P03-871-Tumor Unknown Somatic WXS Illumina GAIIx SLC25A28 81894 broad.mit.edu hg19 10 101373523 101373523 + Missense_Mutation SNP G A TCGA-EJ-8470-01 Unknown Somatic WXS Illumina GAIIx DNMBP 23268 CPCGene hg19 10 101715180 101715180 + Missense_Mutation SNP C T CPCG0210-F1 Unknown Somatic WXS Illumina HiSeq 2500 CPN1 1369 broad.mit.edu hg19 10 101802208 101802208 + Missense_Mutation SNP C T TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx CPN1 1369 CPCGene hg19 10 101835810 101835810 + Missense_Mutation SNP C T CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 PKD2L1 9033 broad.mit.edu hg19 10 102052799 102052799 + Missense_Mutation SNP G A TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx SCD 6319 broad.mit.edu hg19 10 102107912 102107912 + Missense_Mutation SNP T G P07-5037 Unknown Somatic WGS Illumina GAIIx SEC31B 25956 broad.mit.edu hg19 10 102248628 102248628 + Missense_Mutation SNP G T TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx SEC31B 25956 broad.mit.edu hg19 10 102257878 102257878 + Missense_Mutation SNP C A TCGA-J4-A83N-01 Unknown Somatic WXS Illumina GAIIx LZTS2 84445 broad.mit.edu hg19 10 102762582 102762582 + Missense_Mutation SNP G A TCGA-G9-6379-01 Unknown Somatic WXS Illumina GAIIx PDZD7 79955 CPCGene hg19 10 102778602 102778602 + Missense_Mutation SNP G C CPCG0414-F1 Unknown Somatic WXS Illumina HiSeq 2500 KAZALD1 81621 broad.mit.edu hg19 10 102822750 102822750 + Missense_Mutation SNP T C PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx TLX1NB 100038246 broad.mit.edu hg19 10 102849597 102849597 + Missense_Mutation SNP G A TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx C10 0 broad.mit.edu hg19 10 103755054 103755054 + Missense_Mutation SNP C G P05-3436-Tumor Unknown Somatic WXS Illumina GAIIx PPRC1 23082 broad.mit.edu hg19 10 103906642 103906642 + Missense_Mutation SNP A G TCGA-J4-A67T-01 Unknown Somatic WXS Illumina GAIIx PPRC1 23082 broad.mit.edu hg19 10 103906651 103906651 + Missense_Mutation SNP G A TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx GBF1 8729 broad.mit.edu hg19 10 104140091 104140091 + Missense_Mutation SNP A G TCGA-XJ-A83G-01 Unknown Somatic WXS Illumina GAIIx TMEM180 0 broad.mit.edu hg19 10 104235682 104235682 + Missense_Mutation SNP G A PR-06-3199 Unknown Somatic WGS Illumina GAIIx SUFU 51684 broad.mit.edu hg19 10 104309804 104309804 + Missense_Mutation SNP C G TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx NT5C2 22978 CPCGene hg19 10 104857066 104857066 + Missense_Mutation SNP A C CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 PDCD11 22984 broad.mit.edu hg19 10 105162908 105162908 + Missense_Mutation SNP G A PR-3043 Unknown Somatic WGS Illumina GAIIx OBFC1 0 broad.mit.edu hg19 10 105642534 105642534 + Missense_Mutation SNP G A P07-5318 Unknown Somatic WGS Illumina GAIIx OBFC1 0 CPCGene hg19 10 105677256 105677256 + Missense_Mutation SNP C A CPCG0122-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLK 9748 broad.mit.edu hg19 10 105761232 105761232 + Missense_Mutation SNP C A TCGA-G9-6364-01 Unknown Somatic WXS Illumina GAIIx SLK 9748 CPCGene hg19 10 105762538 105762538 + Missense_Mutation SNP C T CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 COL17A1 1308 broad.mit.edu hg19 10 105798253 105798253 + Missense_Mutation SNP G A TCGA-G9-6336-01 Unknown Somatic WGS Illumina GAIIx COL17A1 1308 broad.mit.edu hg19 10 105801073 105801073 + Missense_Mutation SNP G A TCGA-EJ-7218-01 Unknown Somatic WXS Illumina GAIIx COL17A1 1308 CPCGene hg19 10 105836073 105836073 + Missense_Mutation SNP C T CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 WDR96 0 broad.mit.edu hg19 10 105900659 105900659 + Missense_Mutation SNP A G TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx WDR96 0 broad.mit.edu hg19 10 105967581 105967581 + Missense_Mutation SNP G A TCGA-HC-8261-01 Unknown Somatic WXS Illumina GAIIx SORCS3 22986 broad.mit.edu hg19 10 106849581 106849581 + Missense_Mutation SNP G A P07-684-Tumor Unknown Somatic WXS Illumina GAIIx MXI1 4601 CPCGene hg19 10 112004585 112004585 + Splice_Site SNP G T CPCG0191-F1 Unknown Somatic WXS Illumina HiSeq 2500 ACSL5 51703 broad.mit.edu hg19 10 114171271 114171271 + Missense_Mutation SNP T C P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx CASP7 840 broad.mit.edu hg19 10 115489132 115489132 + Missense_Mutation SNP C A TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx PLEKHS1 79949 broad.mit.edu hg19 10 115527188 115527188 + Missense_Mutation SNP C T TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx NHLRC2 374354 CPCGene hg19 10 115614787 115614787 + Missense_Mutation SNP G T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCDC186 55088 CPCGene hg19 10 115894813 115894813 + Missense_Mutation SNP A G CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCDC186 55088 broad.mit.edu hg19 10 115922869 115922869 + Missense_Mutation SNP T A TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx AFAP1L2 84632 broad.mit.edu hg19 10 116100394 116100394 + Missense_Mutation SNP G A P03-2345 Unknown Somatic WGS Illumina GAIIx ABLIM1 3983 CPCGene hg19 10 116199013 116199013 + Splice_Site SNP C T CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 ABLIM1 3983 broad.mit.edu hg19 10 116207677 116207677 + Missense_Mutation SNP G A TCGA-J4-A67N-01 Unknown Somatic WXS Illumina GAIIx ATRNL1 26033 CPCGene hg19 10 117061391 117061391 + Missense_Mutation SNP T A CPCG0184-F1 Unknown Somatic WXS Illumina HiSeq 2500 PNLIPRP3 119548 broad.mit.edu hg19 10 118215238 118215238 + Missense_Mutation SNP A C PR-3051-Tumor Unknown Somatic WXS Illumina GAIIx PNLIPRP1 5407 broad.mit.edu hg19 10 118352048 118352048 + Missense_Mutation SNP T A TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx TIAL1 7073 EMBL hg19 10 121347726 121347726 + Missense_Mutation SNP C G EOPC-04 Unknown Somatic WGS Illumina HiSeq2000 BAG3 9531 broad.mit.edu hg19 10 121411220 121411220 + Missense_Mutation SNP G A PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx MCMBP 79892 broad.mit.edu hg19 10 121595126 121595126 + Missense_Mutation SNP C T TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx FGFR2 2263 broad.mit.edu hg19 10 123256220 123256220 + Missense_Mutation SNP T C TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx TACC2 10579 broad.mit.edu hg19 10 123843719 123843719 + Missense_Mutation SNP A T TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx TACC2 10579 broad.mit.edu hg19 10 123954657 123954657 + Missense_Mutation SNP C T TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx HTRA1 5654 broad.mit.edu hg19 10 124273783 124273783 + Missense_Mutation SNP G A TCGA-G9-6498-01 Unknown Somatic WXS Illumina GAIIx DMBT1 1755 CPCGene hg19 10 124336010 124336010 + Missense_Mutation SNP T C CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 DMBT1 1755 broad.mit.edu hg19 10 124345667 124345667 + Missense_Mutation SNP C T PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx DMBT1 1755 broad.mit.edu hg19 10 124358388 124358388 + Missense_Mutation SNP G A TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx DMBT1 1755 broad.mit.edu hg19 10 124358594 124358594 + Missense_Mutation SNP C T PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx GPR26 2849 EMBL hg19 10 125426537 125426537 + Missense_Mutation SNP G A EOPC-04 Unknown Somatic WGS Illumina HiSeq2000 CHST15 51363 CPCGene hg19 10 125805446 125805446 + Missense_Mutation SNP A C CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 OAT 4942 CPCGene hg19 10 126090333 126090333 + Missense_Mutation SNP T C CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZRANB1 54764 CPCGene hg19 10 126655243 126655243 + Missense_Mutation SNP G A CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 EDRF1 26098 broad.mit.edu hg19 10 127429204 127429204 + Missense_Mutation SNP A C TCGA-XJ-A83G-01 Unknown Somatic WXS Illumina GAIIx ADAM12 8038 broad.mit.edu hg19 10 128019054 128019054 + Missense_Mutation SNP C G TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx C10 0 broad.mit.edu hg19 10 128192655 128192655 + Missense_Mutation SNP C T TCGA-HC-8259-01 Unknown Somatic WXS Illumina GAIIx DOCK1 1793 CPCGene hg19 10 129172132 129172132 + Splice_Site SNP T A CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 DOCK1 1793 EMBL hg19 10 129183058 129183058 + Missense_Mutation SNP C T EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 DOCK1 1793 broad.mit.edu hg19 10 129224169 129224169 + Missense_Mutation SNP A G TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx FOXI2 399823 CPCGene hg19 10 129537119 129537119 + Missense_Mutation SNP G T CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 PTPRE 5791 CPCGene hg19 10 129866433 129866433 + Missense_Mutation SNP A G CPCG0210-F1 Unknown Somatic WXS Illumina HiSeq 2500 MKI67 4288 broad.mit.edu hg19 10 129901213 129901213 + Missense_Mutation SNP C G TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx INPP5A 3632 CPCGene hg19 10 134459467 134459467 + Missense_Mutation SNP C T CPCG0357-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTC40 0 broad.mit.edu hg19 10 134622066 134622066 + Missense_Mutation SNP C G TCGA-EJ-7781-01 Unknown Somatic WXS Illumina GAIIx TTC40 0 CPCGene hg19 10 134647605 134647605 + Missense_Mutation SNP C T CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTC40 0 CPCGene hg19 10 134722007 134722007 + Missense_Mutation SNP C A CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTC40 0 broad.mit.edu hg19 10 134743225 134743225 + Missense_Mutation SNP T C P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx TTC40 0 broad.mit.edu hg19 10 134743283 134743283 + Missense_Mutation SNP G A TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx GPR123 0 broad.mit.edu hg19 10 134942117 134942117 + Missense_Mutation SNP C T TCGA-EJ-5521-01 Unknown Somatic WXS Illumina GAIIx KNDC1 85442 broad.mit.edu hg19 10 135011951 135011951 + Missense_Mutation SNP G A PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx KNDC1 85442 CPCGene hg19 10 135011989 135011989 + Missense_Mutation SNP C T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 KNDC1 85442 CPCGene hg19 10 135015203 135015203 + Missense_Mutation SNP T C CPCG0269-F1 Unknown Somatic WXS Illumina HiSeq 2500 KNDC1 85442 broad.mit.edu hg19 10 135024980 135024980 + Missense_Mutation SNP C T TCGA-VN-A88M-01 Unknown Somatic WXS Illumina GAIIx ADAM8 101 broad.mit.edu hg19 10 135084481 135084481 + Missense_Mutation SNP C A PR-09-5700-Tumor Unknown Somatic WXS Illumina GAIIx ECHS1 1892 broad.mit.edu hg19 10 135182453 135182453 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx SYCE1 93426 broad.mit.edu hg19 10 135372382 135372382 + Missense_Mutation SNP C T PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx HRAS 3265 broad.mit.edu hg19 11 533874 533874 + Missense_Mutation SNP T C TCGA-VN-A88N-01 Unknown Somatic WXS Illumina GAIIx PNPLA2 57104 broad.mit.edu hg19 11 824567 824567 + Missense_Mutation SNP C T PR-05-3595 Unknown Somatic WGS Illumina GAIIx MUC2 4583 broad.mit.edu hg19 11 1081737 1081737 + Missense_Mutation SNP C T TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx MUC5B 727897 broad.mit.edu hg19 11 1255481 1255481 + Missense_Mutation SNP G A TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx MUC5B 727897 broad.mit.edu hg19 11 1256559 1256559 + Missense_Mutation SNP C T PR-06-1749 Unknown Somatic WGS Illumina GAIIx MUC5B 727897 CPCGene hg19 11 1264946 1264946 + Missense_Mutation SNP C T CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 BRSK2 9024 broad.mit.edu hg19 11 1464737 1464737 + Missense_Mutation SNP G A PR-STID0000003127 Unknown Somatic WGS Illumina GAIIx MOB2 81532 broad.mit.edu hg19 11 1491542 1491542 + Missense_Mutation SNP G A PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx KRTAP5-2 440021 broad.mit.edu hg19 11 1619202 1619202 + Missense_Mutation SNP G A PR-08-4154 Unknown Somatic WGS Illumina GAIIx KRTAP5-2 440021 broad.mit.edu hg19 11 1619202 1619202 + Missense_Mutation SNP G A TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx KRTAP5-2 440021 broad.mit.edu hg19 11 1619202 1619202 + Missense_Mutation SNP G A TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx KRTAP5-2 440021 broad.mit.edu hg19 11 1619202 1619202 + Missense_Mutation SNP G A TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx KRTAP5-4 387267 broad.mit.edu hg19 11 1643175 1643175 + Missense_Mutation SNP C T TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx KRTAP5-5 439915 broad.mit.edu hg19 11 1651120 1651120 + Missense_Mutation SNP G T TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx KRTAP5-5 439915 broad.mit.edu hg19 11 1651120 1651120 + Missense_Mutation SNP G T PR-2621 Unknown Somatic WGS Illumina GAIIx KRTAP5-5 439915 broad.mit.edu hg19 11 1651625 1651625 + Missense_Mutation SNP G A TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx KRTAP5-5 439915 CPCGene hg19 11 1651643 1651643 + Missense_Mutation SNP C T CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 KRTAP5-5 439915 CPCGene hg19 11 1651643 1651643 + Missense_Mutation SNP C T CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 LSP1 4046 broad.mit.edu hg19 11 1874388 1874388 + Missense_Mutation SNP C T P07-5318 Unknown Somatic WGS Illumina GAIIx TRPM5 29850 CPCGene hg19 11 2428020 2428020 + Missense_Mutation SNP C G CPCG0263-F1 Unknown Somatic WXS Illumina HiSeq 2500 TRPM5 29850 broad.mit.edu hg19 11 2432663 2432663 + Missense_Mutation SNP G A TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx TRPM5 29850 broad.mit.edu hg19 11 2444154 2444154 + Missense_Mutation SNP C T P00-000450-Tumor Unknown Somatic WXS Illumina GAIIx KCNQ1 3784 broad.mit.edu hg19 11 2549250 2549250 + Splice_Site SNP T C TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx KCNQ1 3784 broad.mit.edu hg19 11 2610023 2610023 + Missense_Mutation SNP G A PR-0427-Tumor Unknown Somatic WXS Illumina GAIIx SLC22A18AS 5003 CPCGene hg19 11 2920891 2920891 + Missense_Mutation SNP C A CPCG0354-F1 Unknown Somatic WXS Illumina HiSeq 2500 OSBPL5 114879 broad.mit.edu hg19 11 3140844 3140844 + Missense_Mutation SNP G A PR-05-3595 Unknown Somatic WGS Illumina GAIIx MRGPRE 116534 broad.mit.edu hg19 11 3249231 3249231 + Missense_Mutation SNP C T P03-1426 Unknown Somatic WGS Illumina GAIIx MRGPRE 116534 broad.mit.edu hg19 11 3249949 3249949 + Missense_Mutation SNP G A P03-1906-Tumor Unknown Somatic WXS Illumina GAIIx ZNF195 7748 CPCGene hg19 11 3381121 3381121 + Missense_Mutation SNP G A CPCG0372-F1 Unknown Somatic WXS Illumina HiSeq 2500 CHRNA10 57053 broad.mit.edu hg19 11 3691150 3691150 + Missense_Mutation SNP C T TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx RRM1 6240 CPCGene hg19 11 4127297 4127297 + Missense_Mutation SNP A T CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 RRM1 6240 broad.mit.edu hg19 11 4130909 4130909 + Missense_Mutation SNP C T TCGA-G9-6498-01 Unknown Somatic WXS Illumina GAIIx OR51F1 256892 broad.mit.edu hg19 11 4791052 4791052 + Missense_Mutation SNP A T TCGA-EJ-5521-01 Unknown Somatic WXS Illumina GAIIx OR51G1 79324 broad.mit.edu hg19 11 4944711 4944711 + Missense_Mutation SNP G T P03-1426 Unknown Somatic WGS Illumina GAIIx OR52N5 390075 broad.mit.edu hg19 11 5799051 5799051 + Missense_Mutation SNP G A P04-1421-Tumor Unknown Somatic WXS Illumina GAIIx OR56A1 120796 broad.mit.edu hg19 11 6048918 6048918 + Missense_Mutation SNP G C TCGA-EJ-7321-01 Unknown Somatic WXS Illumina GAIIx FAM160A2 84067 CPCGene hg19 11 6245435 6245435 + Missense_Mutation SNP C A CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 CNGA4 1262 CPCGene hg19 11 6261010 6261010 + Missense_Mutation SNP C T CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 CNGA4 1262 broad.mit.edu hg19 11 6261374 6261374 + Missense_Mutation SNP T G TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx CNGA4 1262 broad.mit.edu hg19 11 6261668 6261668 + Missense_Mutation SNP G A PR-09-3566-Tumor Unknown Somatic WXS Illumina GAIIx CCKBR 887 broad.mit.edu hg19 11 6281223 6281223 + Missense_Mutation SNP G C TCGA-EJ-7786-01 Unknown Somatic WXS Illumina GAIIx CCKBR 887 broad.mit.edu hg19 11 6292495 6292495 + Missense_Mutation SNP C T P07-4941 Unknown Somatic WGS Illumina GAIIx DNHD1 144132 broad.mit.edu hg19 11 6541310 6541310 + Missense_Mutation SNP C T TCGA-2A-A8VL-01 Unknown Somatic WXS Illumina GAIIx DNHD1 144132 broad.mit.edu hg19 11 6592175 6592175 + Missense_Mutation SNP G A TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx TPP1 1200 broad.mit.edu hg19 11 6640071 6640071 + Missense_Mutation SNP C T TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx ZNF215 7762 CPCGene hg19 11 6953559 6953559 + Missense_Mutation SNP G A CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF214 7761 broad.mit.edu hg19 11 7021497 7021497 + Missense_Mutation SNP G C TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx NLRP14 338323 broad.mit.edu hg19 11 7064143 7064143 + Missense_Mutation SNP G T TCGA-HC-7075-01 Unknown Somatic WGS Illumina GAIIx NLRP14 338323 broad.mit.edu hg19 11 7064330 7064330 + Missense_Mutation SNP G A PR-06-3199 Unknown Somatic WGS Illumina GAIIx NLRP14 338323 CPCGene hg19 11 7064376 7064376 + Missense_Mutation SNP G A CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 NLRP10 338322 broad.mit.edu hg19 11 7981684 7981684 + Missense_Mutation SNP C T P08-1042 Unknown Somatic WGS Illumina GAIIx NLRP10 338322 broad.mit.edu hg19 11 7981685 7981685 + Missense_Mutation SNP G A TCGA-EJ-7315-01 Unknown Somatic WXS Illumina GAIIx SCUBE2 57758 broad.mit.edu hg19 11 9069059 9069059 + Missense_Mutation SNP T C TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx SCUBE2 57758 broad.mit.edu hg19 11 9111306 9111306 + Missense_Mutation SNP G T PR-04-3113-Tumor Unknown Somatic WXS Illumina GAIIx MRVI1 10335 broad.mit.edu hg19 11 10649268 10649268 + Missense_Mutation SNP C T TCGA-J4-A83L-01 Unknown Somatic WXS Illumina GAIIx CTR9 9646 broad.mit.edu hg19 11 10800225 10800225 + Splice_Site SNP G C TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx ZBED5 58486 broad.mit.edu hg19 11 10875178 10875178 + Missense_Mutation SNP T C PR-05-3595 Unknown Somatic WGS Illumina GAIIx BTBD10 84280 broad.mit.edu hg19 11 13443342 13443342 + Missense_Mutation SNP T C TCGA-EJ-8470-01 Unknown Somatic WXS Illumina GAIIx PDE3B 5140 CPCGene hg19 11 14852282 14852282 + Missense_Mutation SNP C T CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 PIK3C2A 5286 broad.mit.edu hg19 11 17190738 17190738 + Missense_Mutation SNP G A TCGA-G9-6498-01 Unknown Somatic WXS Illumina GAIIx KCNJ11 3767 CPCGene hg19 11 17409628 17409628 + Missense_Mutation SNP C T CPCG0344-F1 Unknown Somatic WXS Illumina HiSeq 2500 USH1C 10083 broad.mit.edu hg19 11 17531009 17531009 + Missense_Mutation SNP C A P04-594-Tumor Unknown Somatic WXS Illumina GAIIx MYOD1 4654 broad.mit.edu hg19 11 17741764 17741764 + Missense_Mutation SNP C T PR-06-1749 Unknown Somatic WGS Illumina GAIIx MRGPRX4 117196 broad.mit.edu hg19 11 18195494 18195494 + Missense_Mutation SNP C T TCGA-EJ-5516-01 Unknown Somatic WXS Illumina GAIIx SAA2 6289 broad.mit.edu hg19 11 18267020 18267020 + Missense_Mutation SNP C T TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx LDHC 3948 broad.mit.edu hg19 11 18460141 18460141 + Missense_Mutation SNP C T TCGA-2A-A8VL-01 Unknown Somatic WXS Illumina GAIIx TSG101 7251 broad.mit.edu hg19 11 18541081 18541081 + Missense_Mutation SNP C T TCGA-J4-A83M-01 Unknown Somatic WXS Illumina GAIIx IGSF22 283284 broad.mit.edu hg19 11 18736129 18736129 + Missense_Mutation SNP G A P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx PTPN5 84867 broad.mit.edu hg19 11 18759486 18759486 + Missense_Mutation SNP G A P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx PTPN5 84867 broad.mit.edu hg19 11 18762159 18762159 + Missense_Mutation SNP C T TCGA-J4-A83K-01 Unknown Somatic WXS Illumina GAIIx ZDHHC13 54503 CPCGene hg19 11 19169209 19169209 + Missense_Mutation SNP C G CPCG0210-F1 Unknown Somatic WXS Illumina HiSeq 2500 NAV2 89797 broad.mit.edu hg19 11 19735327 19735327 + Missense_Mutation SNP C A TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx NAV2 89797 broad.mit.edu hg19 11 20078084 20078084 + Missense_Mutation SNP G C PR-06-3199 Unknown Somatic WGS Illumina GAIIx NAV2 89797 broad.mit.edu hg19 11 20101630 20101630 + Missense_Mutation SNP G T TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx NAV2 89797 broad.mit.edu hg19 11 20104557 20104557 + Missense_Mutation SNP G A PR-01-2382-Tumor Unknown Somatic WXS Illumina GAIIx SLC6A5 9152 broad.mit.edu hg19 11 20652292 20652292 + Missense_Mutation SNP G A P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx NELL1 4745 CPCGene hg19 11 20950026 20950026 + Splice_Site SNP G A CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANO3 63982 broad.mit.edu hg19 11 26620449 26620449 + Missense_Mutation SNP G T TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx BBOX1 8424 broad.mit.edu hg19 11 27077078 27077078 + Missense_Mutation SNP T A TCGA-J4-8200-01 Unknown Somatic WXS Illumina GAIIx CCDC34 91057 broad.mit.edu hg19 11 27379087 27379087 + Missense_Mutation SNP T C TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx DCDC1 341019 broad.mit.edu hg19 11 31312310 31312310 + Missense_Mutation SNP G C TCGA-EJ-5509-01 Unknown Somatic WXS Illumina GAIIx CCDC73 493860 CPCGene hg19 11 32663566 32663566 + Missense_Mutation SNP A T CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 CSTF3 1479 broad.mit.edu hg19 11 33117876 33117876 + Missense_Mutation SNP T C TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx HIPK3 10114 broad.mit.edu hg19 11 33373268 33373268 + Missense_Mutation SNP T C TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx KIAA1549L 25758 broad.mit.edu hg19 11 33564307 33564307 + Missense_Mutation SNP G A TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx KIAA1549L 25758 broad.mit.edu hg19 11 33581369 33581369 + Missense_Mutation SNP C T P07-684-Tumor Unknown Somatic WXS Illumina GAIIx KIAA1549L 25758 broad.mit.edu hg19 11 33628365 33628365 + Missense_Mutation SNP C T PR-02-2072-Tumor Unknown Somatic WXS Illumina GAIIx NAT10 55226 CPCGene hg19 11 34158568 34158568 + Missense_Mutation SNP A T CPCG0342-F1 Unknown Somatic WXS Illumina HiSeq 2500 NAT10 55226 broad.mit.edu hg19 11 34160789 34160789 + Missense_Mutation SNP G A PR-0508 Unknown Somatic WGS Illumina GAIIx CAT 847 broad.mit.edu hg19 11 34474685 34474685 + Missense_Mutation SNP A G TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx SLC1A2 6506 CPCGene hg19 11 35308373 35308373 + Missense_Mutation SNP G A CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC1A2 6506 CPCGene hg19 11 35327714 35327714 + Missense_Mutation SNP A G CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 LDLRAD3 143458 CPCGene hg19 11 36103278 36103278 + Missense_Mutation SNP G A CPCG0078-F1 Unknown Somatic WXS Illumina HiSeq 2500 RAG1 5896 broad.mit.edu hg19 11 36595849 36595849 + Missense_Mutation SNP G A TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx RAG1 5896 broad.mit.edu hg19 11 36597064 36597064 + Missense_Mutation SNP G A TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx RAG1 5896 broad.mit.edu hg19 11 36597480 36597480 + Missense_Mutation SNP G A TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx RAG2 5897 broad.mit.edu hg19 11 36615227 36615227 + Missense_Mutation SNP A G TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx ACCSL 390110 broad.mit.edu hg19 11 44080233 44080233 + Missense_Mutation SNP C T TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx ACCS 84680 broad.mit.edu hg19 11 44100335 44100335 + Splice_Site SNP G T TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx ALX4 60529 broad.mit.edu hg19 11 44289106 44289106 + Missense_Mutation SNP G A TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx PRDM11 56981 CPCGene hg19 11 45204474 45204474 + Missense_Mutation SNP G A CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRDM11 56981 broad.mit.edu hg19 11 45246384 45246384 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx SLC35C1 55343 CPCGene hg19 11 45832877 45832877 + Missense_Mutation SNP G T CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC35C1 55343 CPCGene hg19 11 45832878 45832878 + Missense_Mutation SNP G T CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 DGKZ 8525 broad.mit.edu hg19 11 46396525 46396525 + Missense_Mutation SNP A G TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx CHRM4 1132 broad.mit.edu hg19 11 46407608 46407608 + Missense_Mutation SNP G T PR-05-3595 Unknown Somatic WGS Illumina GAIIx CKAP5 9793 broad.mit.edu hg19 11 46801810 46801810 + Missense_Mutation SNP A C TCGA-HC-7817-01 Unknown Somatic WXS Illumina GAIIx LRP4 4038 broad.mit.edu hg19 11 46924428 46924428 + Missense_Mutation SNP T G TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx C11 0 CPCGene hg19 11 47176810 47176810 + Missense_Mutation SNP C T CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 MADD 8567 broad.mit.edu hg19 11 47350634 47350634 + Missense_Mutation SNP C T TCGA-G9-6338-01 Unknown Somatic WXS Illumina GAIIx MYBPC3 4607 broad.mit.edu hg19 11 47360202 47360202 + Missense_Mutation SNP C T TCGA-EJ-5509-01 Unknown Somatic WXS Illumina GAIIx NDUFS3 4722 broad.mit.edu hg19 11 47605984 47605984 + Missense_Mutation SNP C T TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx FNBP4 23360 broad.mit.edu hg19 11 47758292 47758292 + Missense_Mutation SNP G C TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx OR4C3 256144 broad.mit.edu hg19 11 48347071 48347071 + Missense_Mutation SNP C A TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx OR4C13 283092 broad.mit.edu hg19 11 49974537 49974537 + Missense_Mutation SNP C T TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx OR4C12 283093 broad.mit.edu hg19 11 50003602 50003602 + Missense_Mutation SNP C T P05-620 Unknown Somatic WGS Illumina GAIIx OR4C11 219429 CPCGene hg19 11 55371071 55371071 + Missense_Mutation SNP G A CPCG0121-F1 Unknown Somatic WXS Illumina HiSeq 2500 OR4P4 81300 broad.mit.edu hg19 11 55406191 55406191 + Missense_Mutation SNP C T TCGA-QU-A6IO-01 Unknown Somatic WXS Illumina GAIIx OR4P4 81300 broad.mit.edu hg19 11 55406192 55406192 + Missense_Mutation SNP G A TCGA-G9-6329-01 Unknown Somatic WXS Illumina GAIIx OR4C6 219432 CPCGene hg19 11 55433288 55433288 + Missense_Mutation SNP T C CPCG0269-F1 Unknown Somatic WXS Illumina HiSeq 2500 OR4C6 219432 broad.mit.edu hg19 11 55433371 55433371 + Missense_Mutation SNP G T TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx OR5D14 219436 broad.mit.edu hg19 11 55563595 55563595 + Missense_Mutation SNP T C P07-684-Tumor Unknown Somatic WXS Illumina GAIIx OR5L1 219437 broad.mit.edu hg19 11 55579364 55579364 + Missense_Mutation SNP G A PR-01-2492-Tumor Unknown Somatic WXS Illumina GAIIx OR5D18 219438 broad.mit.edu hg19 11 55587532 55587532 + Missense_Mutation SNP G A TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx OR5L2 26338 broad.mit.edu hg19 11 55595260 55595260 + Missense_Mutation SNP G T TCGA-G9-6371-01 Unknown Somatic WXS Illumina GAIIx OR5D16 390144 broad.mit.edu hg19 11 55607137 55607137 + Missense_Mutation SNP C T TCGA-EJ-7784-01 Unknown Somatic WXS Illumina GAIIx OR8I2 120586 broad.mit.edu hg19 11 55861503 55861503 + Missense_Mutation SNP C T TCGA-2A-A8VV-01 Unknown Somatic WXS Illumina GAIIx OR8H2 390151 CPCGene hg19 11 55873222 55873222 + Missense_Mutation SNP A G CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 OR5T1 390155 broad.mit.edu hg19 11 56043918 56043918 + Missense_Mutation SNP C T TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx OR8J1 219477 broad.mit.edu hg19 11 56128312 56128312 + Missense_Mutation SNP C T TCGA-EJ-5522-01 Unknown Somatic WXS Illumina GAIIx OR5M9 390162 broad.mit.edu hg19 11 56230147 56230147 + Missense_Mutation SNP G A PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx OR5M9 390162 CPCGene hg19 11 56230864 56230864 + Missense_Mutation SNP G A CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 LRRC55 219527 broad.mit.edu hg19 11 56949994 56949994 + Missense_Mutation SNP C T TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx SSRP1 6749 broad.mit.edu hg19 11 57095254 57095254 + Missense_Mutation SNP T C PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx P2RX3 5024 broad.mit.edu hg19 11 57118259 57118259 + Missense_Mutation SNP C T P06-1125-Tumor Unknown Somatic WXS Illumina GAIIx PRG3 10394 broad.mit.edu hg19 11 57147239 57147239 + Missense_Mutation SNP C T TCGA-EJ-5542-01 Unknown Somatic WXS Illumina GAIIx SLC43A3 29015 broad.mit.edu hg19 11 57188482 57188482 + Missense_Mutation SNP G T PR-09-5700-Tumor Unknown Somatic WXS Illumina GAIIx UBE2L6 9246 CPCGene hg19 11 57321999 57321999 + Missense_Mutation SNP A T CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 CLP1 10978 CPCGene hg19 11 57427321 57427321 + Missense_Mutation SNP G A CPCG0410-F1 Unknown Somatic WXS Illumina HiSeq 2500 OR5B2 390190 broad.mit.edu hg19 11 58190360 58190360 + Missense_Mutation SNP G T TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx OR5B12 390191 broad.mit.edu hg19 11 58207266 58207266 + Missense_Mutation SNP C T TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx FAM111A 63901 broad.mit.edu hg19 11 58919785 58919785 + Missense_Mutation SNP C T P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx MPEG1 219972 broad.mit.edu hg19 11 58978336 58978336 + Missense_Mutation SNP A C TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx OR5A1 219982 broad.mit.edu hg19 11 59211431 59211431 + Missense_Mutation SNP C T PR-04-194-Tumor Unknown Somatic WXS Illumina GAIIx OR4D9 390199 broad.mit.edu hg19 11 59282589 59282589 + Missense_Mutation SNP T G TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx OSBP 5007 EMBL hg19 11 59376018 59376018 + Missense_Mutation SNP T G EOPC-06 Unknown Somatic WGS Illumina HiSeq2000 STX3 6809 CPCGene hg19 11 59554595 59554595 + Missense_Mutation SNP C G CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 TCN1 6947 broad.mit.edu hg19 11 59633903 59633903 + Missense_Mutation SNP A G TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx MS4A6A 64231 CPCGene hg19 11 59949120 59949120 + Missense_Mutation SNP G A CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 MS4A1 931 CPCGene hg19 11 60233415 60233415 + Missense_Mutation SNP A C CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRPF19 27339 broad.mit.edu hg19 11 60658695 60658695 + Missense_Mutation SNP G A TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx CD6 923 broad.mit.edu hg19 11 60785249 60785249 + Missense_Mutation SNP C T PR-08-4154 Unknown Somatic WGS Illumina GAIIx VWCE 220001 broad.mit.edu hg19 11 61026607 61026607 + Missense_Mutation SNP A G PR-3042 Unknown Somatic WGS Illumina GAIIx VWCE 220001 broad.mit.edu hg19 11 61034970 61034970 + Missense_Mutation SNP C T TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx CYB561A3 220002 CPCGene hg19 11 61120494 61120494 + Missense_Mutation SNP C T CPCG0413-F1 Unknown Somatic WXS Illumina HiSeq 2500 FADS3 3995 broad.mit.edu hg19 11 61644990 61644990 + Missense_Mutation SNP T C P04-1084 Unknown Somatic WGS Illumina GAIIx SCGB2A2 4250 broad.mit.edu hg19 11 62038408 62038408 + Missense_Mutation SNP G C TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx AHNAK 79026 broad.mit.edu hg19 11 62286586 62286586 + Missense_Mutation SNP T C P08-716 Unknown Somatic WGS Illumina GAIIx AHNAK 79026 broad.mit.edu hg19 11 62293548 62293548 + Missense_Mutation SNP C A P07-837 Unknown Somatic WGS Illumina GAIIx AHNAK 79026 CPCGene hg19 11 62298144 62298144 + Missense_Mutation SNP C T CPCG0183-F1 Unknown Somatic WXS Illumina HiSeq 2500 MTA2 9219 broad.mit.edu hg19 11 62361465 62361465 + Missense_Mutation SNP C G TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx MTA2 9219 broad.mit.edu hg19 11 62363783 62363783 + Missense_Mutation SNP G A P05-620 Unknown Somatic WGS Illumina GAIIx POLR2G 5436 CPCGene hg19 11 62530428 62530428 + Missense_Mutation SNP A C CPCG0238-F1 Unknown Somatic WXS Illumina HiSeq 2500 WDR74 54663 CPCGene hg19 11 62606623 62606623 + Missense_Mutation SNP C A CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC22A24 283238 CPCGene hg19 11 62848518 62848518 + Missense_Mutation SNP G A CPCG0354-F1 Unknown Somatic WXS Illumina HiSeq 2500 MARK2 2011 broad.mit.edu hg19 11 63676486 63676486 + Missense_Mutation SNP G A P00-000450-Tumor Unknown Somatic WXS Illumina GAIIx OTUB1 55611 broad.mit.edu hg19 11 63764357 63764357 + Missense_Mutation SNP G T TCGA-HC-7750-01 Unknown Somatic WXS Illumina GAIIx NRXN2 9379 broad.mit.edu hg19 11 64417941 64417941 + Missense_Mutation SNP C T P04-1084 Unknown Somatic WGS Illumina GAIIx NRXN2 9379 broad.mit.edu hg19 11 64418965 64418965 + Missense_Mutation SNP C T PR-07-4610 Unknown Somatic WGS Illumina GAIIx MAP4K2 5871 broad.mit.edu hg19 11 64559403 64559403 + Missense_Mutation SNP C T TCGA-J4-A67O-01 Unknown Somatic WXS Illumina GAIIx MEN1 4221 broad.mit.edu hg19 11 64575501 64575501 + Missense_Mutation SNP A T TCGA-ZG-A8QX-01 Unknown Somatic WXS Illumina GAIIx CDC42BPG 55561 CPCGene hg19 11 64611889 64611889 + Missense_Mutation SNP C T CPCG0255-F1 Unknown Somatic WXS Illumina HiSeq 2500 EHD1 10938 broad.mit.edu hg19 11 64627791 64627791 + Missense_Mutation SNP C T PR-06-1749 Unknown Somatic WGS Illumina GAIIx ATG2A 23130 broad.mit.edu hg19 11 64665373 64665373 + Missense_Mutation SNP C T P03-871-Tumor Unknown Somatic WXS Illumina GAIIx NAALADL1 10004 broad.mit.edu hg19 11 64820972 64820972 + Missense_Mutation SNP C A PR-00-1823-Tumor Unknown Somatic WXS Illumina GAIIx TM7SF2 7108 broad.mit.edu hg19 11 64880871 64880871 + Missense_Mutation SNP C T TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx SYVN1 84447 broad.mit.edu hg19 11 64899771 64899771 + Missense_Mutation SNP T C PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx LTBP3 4054 broad.mit.edu hg19 11 65314313 65314313 + Missense_Mutation SNP G T TCGA-EJ-7218-01 Unknown Somatic WXS Illumina GAIIx EHBP1L1 254102 broad.mit.edu hg19 11 65349635 65349635 + Missense_Mutation SNP G T TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx RELA 5970 broad.mit.edu hg19 11 65423213 65423213 + Missense_Mutation SNP G A TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx KAT5 10524 broad.mit.edu hg19 11 65484372 65484372 + Missense_Mutation SNP A G TCGA-G9-6342-01 Unknown Somatic WXS Illumina GAIIx CATSPER1 117144 broad.mit.edu hg19 11 65789325 65789325 + Missense_Mutation SNP G A TCGA-VN-A88L-01 Unknown Somatic WXS Illumina GAIIx LRFN4 78999 broad.mit.edu hg19 11 66625511 66625511 + Missense_Mutation SNP G A TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx LRFN4 78999 broad.mit.edu hg19 11 66626161 66626161 + Missense_Mutation SNP G A P07-4941 Unknown Somatic WGS Illumina GAIIx PC 5091 CPCGene hg19 11 66639567 66639567 + Missense_Mutation SNP C T CPCG0184-F1 Unknown Somatic WXS Illumina HiSeq 2500 SYT12 91683 broad.mit.edu hg19 11 66812168 66812168 + Missense_Mutation SNP C T TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx ADRBK1 0 broad.mit.edu hg19 11 67052768 67052768 + Missense_Mutation SNP G A TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx SSH3 54961 CPCGene hg19 11 67075675 67075675 + Missense_Mutation SNP C G CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 SSH3 54961 broad.mit.edu hg19 11 67079329 67079329 + Missense_Mutation SNP C T TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx NUDT8 254552 broad.mit.edu hg19 11 67397292 67397292 + Missense_Mutation SNP A G PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx UNC93B1 81622 broad.mit.edu hg19 11 67759287 67759287 + Missense_Mutation SNP C A TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx SUV420H1 0 broad.mit.edu hg19 11 67925444 67925444 + Missense_Mutation SNP G A PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx SUV420H1 0 broad.mit.edu hg19 11 67938486 67938486 + Missense_Mutation SNP C A TCGA-VN-A88L-01 Unknown Somatic WXS Illumina GAIIx SUV420H1 0 CPCGene hg19 11 67939085 67939085 + Missense_Mutation SNP C G CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 SUV420H1 0 broad.mit.edu hg19 11 67947666 67947666 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx C11 0 CPCGene hg19 11 68029943 68029943 + Missense_Mutation SNP T C CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 MTL5 0 broad.mit.edu hg19 11 68480780 68480780 + Missense_Mutation SNP G T TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx CPT1A 1374 broad.mit.edu hg19 11 68552443 68552443 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx IGHMBP2 3508 broad.mit.edu hg19 11 68682435 68682435 + Missense_Mutation SNP C T TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx MRGPRD 116512 broad.mit.edu hg19 11 68747555 68747555 + Missense_Mutation SNP G A TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx SHANK2 22941 broad.mit.edu hg19 11 70319095 70319095 + Missense_Mutation SNP T C TCGA-EJ-5510-01 Unknown Somatic WXS Illumina GAIIx SHANK2 22941 CPCGene hg19 11 70331703 70331703 + Missense_Mutation SNP G A CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 DHCR7 1717 broad.mit.edu hg19 11 71153385 71153385 + Missense_Mutation SNP C A TCGA-EJ-7321-01 Unknown Somatic WXS Illumina GAIIx NUMA1 4926 broad.mit.edu hg19 11 71717294 71717294 + Missense_Mutation SNP C T PR-03-3125 Unknown Somatic WGS Illumina GAIIx ARAP1 116985 broad.mit.edu hg19 11 72403811 72403811 + Missense_Mutation SNP C T TCGA-J4-A67L-01 Unknown Somatic WXS Illumina GAIIx ARHGEF17 9828 broad.mit.edu hg19 11 73020095 73020095 + Missense_Mutation SNP T G P08-1042 Unknown Somatic WGS Illumina GAIIx C2CD3 26005 CPCGene hg19 11 73789730 73789730 + Missense_Mutation SNP C T CPCG0154-F1 Unknown Somatic WXS Illumina HiSeq 2500 PGM2L1 283209 broad.mit.edu hg19 11 74109168 74109168 + Missense_Mutation SNP C G PR-08-556 Unknown Somatic WGS Illumina GAIIx POLD3 10714 broad.mit.edu hg19 11 74303721 74303721 + Missense_Mutation SNP T G TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx GDPD5 81544 broad.mit.edu hg19 11 75150998 75150998 + Missense_Mutation SNP G A TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx DGAT2 84649 broad.mit.edu hg19 11 75511517 75511517 + Missense_Mutation SNP C T P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx C11 0 broad.mit.edu hg19 11 76169235 76169235 + Missense_Mutation SNP G C PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx C11 0 broad.mit.edu hg19 11 76247049 76247049 + Missense_Mutation SNP T G TCGA-G9-6498-01 Unknown Somatic WXS Illumina GAIIx C11 0 broad.mit.edu hg19 11 76257110 76257110 + Missense_Mutation SNP T C TCGA-J4-A83M-01 Unknown Somatic WXS Illumina GAIIx LRRC32 2615 broad.mit.edu hg19 11 76371902 76371902 + Missense_Mutation SNP G A TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx TSKU 25987 CPCGene hg19 11 76507564 76507564 + Missense_Mutation SNP C T CPCG0166-F1 Unknown Somatic WXS Illumina HiSeq 2500 CAPN5 726 CPCGene hg19 11 76833707 76833707 + Missense_Mutation SNP T G CPCG0263-F1 Unknown Somatic WXS Illumina HiSeq 2500 MYO7A 4647 broad.mit.edu hg19 11 76868351 76868351 + Missense_Mutation SNP G A TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx INTS4 92105 broad.mit.edu hg19 11 77669791 77669791 + Splice_Site SNP C T PR-02-2072-Tumor Unknown Somatic WXS Illumina GAIIx KCTD21 283219 broad.mit.edu hg19 11 77885545 77885545 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx TENM4 26011 broad.mit.edu hg19 11 78443391 78443391 + Missense_Mutation SNP T C TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx PRCP 5547 broad.mit.edu hg19 11 82560994 82560994 + Missense_Mutation SNP T C PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx PCF11 51585 broad.mit.edu hg19 11 82877716 82877716 + Missense_Mutation SNP T A TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx PCF11 51585 broad.mit.edu hg19 11 82892950 82892950 + Missense_Mutation SNP T G TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx DLG2 1740 broad.mit.edu hg19 11 83195218 83195218 + Missense_Mutation SNP G A TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx DLG2 1740 broad.mit.edu hg19 11 83243769 83243769 + Missense_Mutation SNP T C TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx CCDC83 220047 CPCGene hg19 11 85623760 85623760 + Missense_Mutation SNP G T CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 EED 8726 CPCGene hg19 11 85961377 85961377 + Missense_Mutation SNP C T CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 ME3 10873 CPCGene hg19 11 86219908 86219908 + Missense_Mutation SNP C T CPCG0401-F1 Unknown Somatic WXS Illumina HiSeq 2500 FZD4 8322 broad.mit.edu hg19 11 86662280 86662280 + Missense_Mutation SNP C G P05-620 Unknown Somatic WGS Illumina GAIIx RAB38 23682 broad.mit.edu hg19 11 87908550 87908550 + Missense_Mutation SNP C T PR-2621 Unknown Somatic WGS Illumina GAIIx CTSC 1075 broad.mit.edu hg19 11 88027268 88027268 + Missense_Mutation SNP C T PR-06-3199 Unknown Somatic WGS Illumina GAIIx GRM5 2915 broad.mit.edu hg19 11 88583140 88583140 + Missense_Mutation SNP G A TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx GRM5 2915 broad.mit.edu hg19 11 88780860 88780860 + Missense_Mutation SNP G A PR-02-254-Tumor Unknown Somatic WXS Illumina GAIIx TYR 7299 broad.mit.edu hg19 11 89028439 89028439 + Missense_Mutation SNP C T TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx NOX4 50507 broad.mit.edu hg19 11 89165957 89165957 + Missense_Mutation SNP T G TCGA-HC-A6AP-01 Unknown Somatic WXS Illumina GAIIx FAT3 120114 CPCGene hg19 11 92086328 92086328 + Missense_Mutation SNP G T CPCG0206-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAT3 120114 broad.mit.edu hg19 11 92087945 92087945 + Missense_Mutation SNP C T PR-05-3595 Unknown Somatic WGS Illumina GAIIx FAT3 120114 CPCGene hg19 11 92088051 92088051 + Missense_Mutation SNP T A CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAT3 120114 broad.mit.edu hg19 11 92531778 92531778 + Missense_Mutation SNP G A TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx FAT3 120114 broad.mit.edu hg19 11 92533470 92533470 + Missense_Mutation SNP T C TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx FAT3 120114 broad.mit.edu hg19 11 92565144 92565144 + Missense_Mutation SNP G A P07-5318 Unknown Somatic WGS Illumina GAIIx FAT3 120114 broad.mit.edu hg19 11 92568223 92568223 + Missense_Mutation SNP C T TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx FAT3 120114 CPCGene hg19 11 92624109 92624109 + Missense_Mutation SNP G A CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCDC67 0 CPCGene hg19 11 93097424 93097424 + Missense_Mutation SNP A C CPCG0324-F1 Unknown Somatic WXS Illumina HiSeq 2500 TAF1D 79101 broad.mit.edu hg19 11 93471313 93471313 + Missense_Mutation SNP C A TCGA-VN-A88O-01 Unknown Somatic WXS Illumina GAIIx TAF1D 79101 broad.mit.edu hg19 11 93471531 93471531 + Missense_Mutation SNP G A TCGA-EJ-5517-01 Unknown Somatic WXS Illumina GAIIx HEPHL1 341208 broad.mit.edu hg19 11 93803647 93803647 + Missense_Mutation SNP T C TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx FOLR4 0 broad.mit.edu hg19 11 94040768 94040768 + Missense_Mutation SNP C T P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx FUT4 2526 CPCGene hg19 11 94278557 94278557 + Missense_Mutation SNP G T CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 PIWIL4 143689 broad.mit.edu hg19 11 94326699 94326699 + Missense_Mutation SNP G A PR-2762-Tumor Unknown Somatic WXS Illumina GAIIx CWC15 51503 CPCGene hg19 11 94704194 94704194 + Missense_Mutation SNP G A CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 JRKL 8690 CPCGene hg19 11 96123816 96123816 + Missense_Mutation SNP G C CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 CNTN5 53942 broad.mit.edu hg19 11 99827625 99827625 + Missense_Mutation SNP T C P07-4941 Unknown Somatic WGS Illumina GAIIx PGR 5241 broad.mit.edu hg19 11 100998642 100998642 + Missense_Mutation SNP A G TCGA-VP-A87J-01 Unknown Somatic WXS Illumina GAIIx KIAA1377 0 broad.mit.edu hg19 11 101828923 101828923 + Missense_Mutation SNP C T PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx KIAA1377 0 broad.mit.edu hg19 11 101849174 101849174 + Missense_Mutation SNP A G PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx BIRC2 329 broad.mit.edu hg19 11 102248361 102248361 + Missense_Mutation SNP C G TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx MMP12 4321 CPCGene hg19 11 102738104 102738104 + Missense_Mutation SNP G A CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 MMP12 4321 broad.mit.edu hg19 11 102742648 102742648 + Missense_Mutation SNP C A TCGA-EJ-5504-01 Unknown Somatic WXS Illumina GAIIx DYNC2H1 79659 CPCGene hg19 11 103026202 103026202 + Missense_Mutation SNP C A CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 PDGFD 80310 broad.mit.edu hg19 11 103797766 103797766 + Missense_Mutation SNP C A P00-000450-Tumor Unknown Somatic WXS Illumina GAIIx PDGFD 80310 broad.mit.edu hg19 11 103818397 103818397 + Missense_Mutation SNP G C P03-2345 Unknown Somatic WGS Illumina GAIIx PDGFD 80310 CPCGene hg19 11 103866795 103866795 + Missense_Mutation SNP G A CPCG0356-F1 Unknown Somatic WXS Illumina HiSeq 2500 DDI1 414301 CPCGene hg19 11 103908350 103908350 + Missense_Mutation SNP T C CPCG0256-F1 Unknown Somatic WXS Illumina HiSeq 2500 GRIA4 2893 CPCGene hg19 11 105804547 105804547 + Missense_Mutation SNP C T CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 GRIA4 2893 broad.mit.edu hg19 11 105845044 105845044 + Missense_Mutation SNP C T P03-2345 Unknown Somatic WGS Illumina GAIIx GUCY1A2 2977 broad.mit.edu hg19 11 106558447 106558447 + Missense_Mutation SNP G A TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx GUCY1A2 2977 broad.mit.edu hg19 11 106810845 106810845 + Missense_Mutation SNP G A PR-07-4610 Unknown Somatic WGS Illumina GAIIx ELMOD1 55531 broad.mit.edu hg19 11 107502335 107502335 + Missense_Mutation SNP C T P03-1426 Unknown Somatic WGS Illumina GAIIx ACAT1 38 broad.mit.edu hg19 11 108018024 108018024 + Missense_Mutation SNP T G P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx ATM 472 broad.mit.edu hg19 11 108137925 108137925 + Missense_Mutation SNP C T P07-4941 Unknown Somatic WGS Illumina GAIIx ATM 472 broad.mit.edu hg19 11 108153603 108153603 + Missense_Mutation SNP A G P08-217 Unknown Somatic WGS Illumina GAIIx ATM 472 broad.mit.edu hg19 11 108175442 108175442 + Missense_Mutation SNP T A TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx ATM 472 broad.mit.edu hg19 11 108186754 108186754 + Missense_Mutation SNP C T PR-03-3125 Unknown Somatic WGS Illumina GAIIx ATM 472 CPCGene hg19 11 108190785 108190785 + Missense_Mutation SNP G A CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATM 472 broad.mit.edu hg19 11 108192065 108192065 + Missense_Mutation SNP G A TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx ATM 472 broad.mit.edu hg19 11 108205765 108205765 + Missense_Mutation SNP G A TCGA-HC-8260-01 Unknown Somatic WXS Illumina GAIIx ATM 472 CPCGene hg19 11 108236086 108236086 + Missense_Mutation SNP C T CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 KDELC2 143888 broad.mit.edu hg19 11 108345632 108345632 + Missense_Mutation SNP C T P04-1084 Unknown Somatic WGS Illumina GAIIx EXPH5 23086 CPCGene hg19 11 108380704 108380704 + Missense_Mutation SNP C G CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 EXPH5 23086 CPCGene hg19 11 108382994 108382994 + Missense_Mutation SNP T G CPCG0354-F1 Unknown Somatic WXS Illumina HiSeq 2500 EXPH5 23086 CPCGene hg19 11 108383633 108383633 + Missense_Mutation SNP A T CPCG0255-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZC3H12C 85463 CPCGene hg19 11 110035623 110035623 + Missense_Mutation SNP C T CPCG0344-F1 Unknown Somatic WXS Illumina HiSeq 2500 RDX 5962 broad.mit.edu hg19 11 110102648 110102648 + Missense_Mutation SNP T C PR-08-4154 Unknown Somatic WGS Illumina GAIIx RDX 5962 CPCGene hg19 11 110108359 110108359 + Missense_Mutation SNP C T CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 LAYN 143903 CPCGene hg19 11 111430981 111430981 + Missense_Mutation SNP G A CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 NCAM1 4684 broad.mit.edu hg19 11 113105824 113105824 + Missense_Mutation SNP C T TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx TTC12 54970 broad.mit.edu hg19 11 113196336 113196336 + Missense_Mutation SNP A G TCGA-HC-7817-01 Unknown Somatic WXS Illumina GAIIx ZW10 9183 broad.mit.edu hg19 11 113639666 113639666 + Missense_Mutation SNP G C TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx BUD13 84811 broad.mit.edu hg19 11 116633878 116633878 + Missense_Mutation SNP C T P08-5852 Unknown Somatic WGS Illumina GAIIx APOA4 337 CPCGene hg19 11 116691619 116691619 + Missense_Mutation SNP C T CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 SIK3 23387 broad.mit.edu hg19 11 116729309 116729309 + Missense_Mutation SNP T C TCGA-EJ-5521-01 Unknown Somatic WXS Illumina GAIIx SIK3 23387 CPCGene hg19 11 116745969 116745969 + Missense_Mutation SNP C T CPCG0182-F1 Unknown Somatic WXS Illumina HiSeq 2500 SIDT2 51092 broad.mit.edu hg19 11 117052146 117052146 + Missense_Mutation SNP T A P09-1580-Tumor Unknown Somatic WXS Illumina GAIIx CEP164 22897 CPCGene hg19 11 117265876 117265876 + Missense_Mutation SNP A T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 DSCAML1 57453 broad.mit.edu hg19 11 117310587 117310587 + Missense_Mutation SNP G A P08-217 Unknown Somatic WGS Illumina GAIIx CD3D 915 broad.mit.edu hg19 11 118210611 118210611 + Missense_Mutation SNP G A PR-00-1823-Tumor Unknown Somatic WXS Illumina GAIIx CD3G 917 broad.mit.edu hg19 11 118223127 118223127 + Missense_Mutation SNP G A TCGA-HC-7075-01 Unknown Somatic WGS Illumina GAIIx UBE4A 9354 CPCGene hg19 11 118244285 118244285 + Missense_Mutation SNP T A CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 KMT2A 4297 CPCGene hg19 11 118307606 118307606 + Missense_Mutation SNP C T CPCG0238-F1 Unknown Somatic WXS Illumina HiSeq 2500 KMT2A 4297 broad.mit.edu hg19 11 118343971 118343971 + Missense_Mutation SNP T C TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx KMT2A 4297 broad.mit.edu hg19 11 118355577 118355577 + Missense_Mutation SNP G T PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx KMT2A 4297 broad.mit.edu hg19 11 118373948 118373948 + Missense_Mutation SNP A G P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx PHLDB1 23187 broad.mit.edu hg19 11 118498113 118498113 + Missense_Mutation SNP T C TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx PHLDB1 23187 broad.mit.edu hg19 11 118516357 118516357 + Missense_Mutation SNP C T TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx UPK2 7379 CPCGene hg19 11 118828885 118828885 + Missense_Mutation SNP C T CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC37A4 2542 broad.mit.edu hg19 11 118899962 118899962 + Missense_Mutation SNP C T TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx DPAGT1 1798 CPCGene hg19 11 118968205 118968205 + Missense_Mutation SNP C G CPCG0336-F1 Unknown Somatic WXS Illumina HiSeq 2500 DPAGT1 1798 broad.mit.edu hg19 11 118968574 118968574 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx USP2 9099 broad.mit.edu hg19 11 119227592 119227592 + Missense_Mutation SNP C T TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx PVRL1 0 broad.mit.edu hg19 11 119548471 119548471 + Missense_Mutation SNP T C TCGA-HC-7736-01 Unknown Somatic WXS Illumina GAIIx TMEM136 219902 CPCGene hg19 11 120198238 120198238 + Missense_Mutation SNP C G CPCG0410-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARHGEF12 23365 CPCGene hg19 11 120207953 120207953 + Missense_Mutation SNP A G CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 GRIK4 2900 CPCGene hg19 11 120837910 120837910 + Missense_Mutation SNP T A CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 TECTA 7007 broad.mit.edu hg19 11 120996304 120996304 + Missense_Mutation SNP C T P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx TECTA 7007 broad.mit.edu hg19 11 121016820 121016820 + Missense_Mutation SNP C A PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx UBASH3B 84959 broad.mit.edu hg19 11 122647786 122647786 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx HSPA8 3312 broad.mit.edu hg19 11 122928986 122928986 + Missense_Mutation SNP T C TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx SCN3B 55800 broad.mit.edu hg19 11 123516294 123516294 + Splice_Site SNP C T TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx TMEM225 338661 CPCGene hg19 11 123755313 123755313 + Missense_Mutation SNP G A CPCG0047-F1 Unknown Somatic WXS Illumina HiSeq 2500 OR4D5 219875 broad.mit.edu hg19 11 123810394 123810394 + Missense_Mutation SNP G A TCGA-G9-6498-01 Unknown Somatic WXS Illumina GAIIx OR4D5 219875 broad.mit.edu hg19 11 123810477 123810477 + Missense_Mutation SNP G A TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx OR4D5 219875 broad.mit.edu hg19 11 123811134 123811134 + Missense_Mutation SNP G A TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx OR10G9 219870 CPCGene hg19 11 123894262 123894262 + Missense_Mutation SNP G A CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 OR10G9 219870 broad.mit.edu hg19 11 123894262 123894262 + Missense_Mutation SNP G T P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx OR10G8 219869 broad.mit.edu hg19 11 123901237 123901237 + Missense_Mutation SNP A T P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx OR10G7 390265 broad.mit.edu hg19 11 123909429 123909429 + Missense_Mutation SNP G T PR-05-3595 Unknown Somatic WGS Illumina GAIIx VWA5A 4013 broad.mit.edu hg19 11 123989244 123989244 + Missense_Mutation SNP G A P04-2740-Tumor Unknown Somatic WXS Illumina GAIIx OR8G1 26494 broad.mit.edu hg19 11 124120602 124120602 + Missense_Mutation SNP C A P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx OR8G5 219865 CPCGene hg19 11 124135326 124135326 + Missense_Mutation SNP C A CPCG0206-F1 Unknown Somatic WXS Illumina HiSeq 2500 SIAE 54414 broad.mit.edu hg19 11 124539286 124539286 + Missense_Mutation SNP T G TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx ESAM 90952 broad.mit.edu hg19 11 124623669 124623669 + Missense_Mutation SNP G A TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx ROBO3 64221 broad.mit.edu hg19 11 124735560 124735560 + Missense_Mutation SNP G A P03-1426 Unknown Somatic WGS Illumina GAIIx ROBO3 64221 CPCGene hg19 11 124742325 124742325 + Missense_Mutation SNP G A CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMEM218 219854 broad.mit.edu hg19 11 124972104 124972104 + Missense_Mutation SNP C T PR-04-3347-Tumor Unknown Somatic WXS Illumina GAIIx FEZ1 9638 broad.mit.edu hg19 11 125324106 125324106 + Missense_Mutation SNP G A P07-5318 Unknown Somatic WGS Illumina GAIIx STT3A 3703 broad.mit.edu hg19 11 125472775 125472775 + Missense_Mutation SNP G A TCGA-HC-7745-01 Unknown Somatic WXS Illumina GAIIx CHEK1 1111 CPCGene hg19 11 125525121 125525121 + Missense_Mutation SNP G A CPCG0090-F1 Unknown Somatic WXS Illumina HiSeq 2500 SRPR 0 CPCGene hg19 11 126135014 126135014 + Missense_Mutation SNP A C CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 SRPR 0 CPCGene hg19 11 126135648 126135648 + Missense_Mutation SNP C T CPCG0122-F1 Unknown Somatic WXS Illumina HiSeq 2500 ST3GAL4 6484 CPCGene hg19 11 126279295 126279295 + Missense_Mutation SNP A G CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIRREL3 84623 CPCGene hg19 11 126333112 126333112 + Missense_Mutation SNP G A CPCG0336-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARHGAP32 9743 broad.mit.edu hg19 11 128844290 128844290 + Missense_Mutation SNP T C TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx ARHGAP32 9743 broad.mit.edu hg19 11 128844792 128844792 + Missense_Mutation SNP T C TCGA-EJ-7325-01 Unknown Somatic WXS Illumina GAIIx ARHGAP32 9743 CPCGene hg19 11 128850500 128850500 + Missense_Mutation SNP G A CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 APLP2 334 broad.mit.edu hg19 11 129992334 129992334 + Missense_Mutation SNP A G PR-04-1243 Unknown Somatic WGS Illumina GAIIx ADAMTS15 170689 broad.mit.edu hg19 11 130343428 130343428 + Missense_Mutation SNP C T TCGA-EJ-7321-01 Unknown Somatic WXS Illumina GAIIx SNX19 399979 CPCGene hg19 11 130784340 130784340 + Missense_Mutation SNP G A CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 SNX19 399979 CPCGene hg19 11 130784750 130784750 + Missense_Mutation SNP C T CPCG0387-F1 Unknown Somatic WXS Illumina HiSeq 2500 IGSF9B 22997 broad.mit.edu hg19 11 133790980 133790980 + Missense_Mutation SNP G A TCGA-EJ-5501-01 Unknown Somatic WXS Illumina GAIIx NCAPD3 23310 broad.mit.edu hg19 11 134054637 134054637 + Missense_Mutation SNP C T TCGA-EJ-5497-01 Unknown Somatic WXS Illumina GAIIx GLB1L2 89944 broad.mit.edu hg19 11 134228975 134228975 + Missense_Mutation SNP G T PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx KDM5A 5927 broad.mit.edu hg19 12 465632 465632 + Missense_Mutation SNP A T PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx WNK1 65125 broad.mit.edu hg19 12 966384 966384 + Missense_Mutation SNP G A TCGA-G9-6338-01 Unknown Somatic WXS Illumina GAIIx WNK1 65125 broad.mit.edu hg19 12 1005563 1005563 + Missense_Mutation SNP A G PR-04-639-Tumor Unknown Somatic WXS Illumina GAIIx LRTM2 654429 broad.mit.edu hg19 12 1943629 1943629 + Missense_Mutation SNP G A TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx CACNA2D4 93589 broad.mit.edu hg19 12 1988135 1988135 + Missense_Mutation SNP G A TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx CACNA2D4 93589 broad.mit.edu hg19 12 1988172 1988172 + Missense_Mutation SNP C T TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx CACNA2D4 93589 broad.mit.edu hg19 12 2022195 2022195 + Missense_Mutation SNP C T TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx CACNA1C 775 CPCGene hg19 12 2602398 2602398 + Missense_Mutation SNP C T CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 CACNA1C 775 broad.mit.edu hg19 12 2719725 2719725 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx CACNA1C 775 CPCGene hg19 12 2760863 2760863 + Missense_Mutation SNP C T CPCG0256-F1 Unknown Somatic WXS Illumina HiSeq 2500 FGF23 8074 broad.mit.edu hg19 12 4479847 4479847 + Missense_Mutation SNP G A TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx DYRK4 8798 broad.mit.edu hg19 12 4708937 4708937 + Missense_Mutation SNP G C PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx AKAP3 10566 broad.mit.edu hg19 12 4736294 4736294 + Missense_Mutation SNP T C TCGA-EJ-5501-01 Unknown Somatic WXS Illumina GAIIx NTF3 4908 CPCGene hg19 12 5604054 5604054 + Missense_Mutation SNP G C CPCG0256-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANO2 57101 broad.mit.edu hg19 12 5908718 5908718 + Missense_Mutation SNP G A P09-628 Unknown Somatic WGS Illumina GAIIx VWF 7450 broad.mit.edu hg19 12 6101119 6101119 + Missense_Mutation SNP C T TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx VWF 7450 broad.mit.edu hg19 12 6101166 6101166 + Missense_Mutation SNP G T P07-837 Unknown Somatic WGS Illumina GAIIx VWF 7450 broad.mit.edu hg19 12 6125273 6125273 + Missense_Mutation SNP C A TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx VWF 7450 broad.mit.edu hg19 12 6172165 6172165 + Missense_Mutation SNP C T TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx PLEKHG6 55200 broad.mit.edu hg19 12 6436658 6436658 + Missense_Mutation SNP G A P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx LTBR 4055 broad.mit.edu hg19 12 6495568 6495568 + Missense_Mutation SNP A G TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx CD27 939 broad.mit.edu hg19 12 6554692 6554692 + Missense_Mutation SNP A G TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx CHD4 1108 CPCGene hg19 12 6701892 6701892 + Missense_Mutation SNP A C CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 GNB3 2784 broad.mit.edu hg19 12 6950751 6950751 + Missense_Mutation SNP A G TCGA-CH-5790-01 Unknown Somatic WXS Illumina GAIIx CD163L1 283316 broad.mit.edu hg19 12 7528295 7528295 + Splice_Site SNP C T P03-2345 Unknown Somatic WGS Illumina GAIIx CD163L1 283316 broad.mit.edu hg19 12 7559339 7559339 + Missense_Mutation SNP G A P03-871-Tumor Unknown Somatic WXS Illumina GAIIx CD163L1 283316 broad.mit.edu hg19 12 7559406 7559406 + Missense_Mutation SNP C T PR-08-2153 Unknown Somatic WGS Illumina GAIIx APOBEC1 339 CPCGene hg19 12 7807205 7807205 + Missense_Mutation SNP G A CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 FOXJ2 55810 broad.mit.edu hg19 12 8197495 8197495 + Missense_Mutation SNP G C TCGA-HC-7748-01 Unknown Somatic WXS Illumina GAIIx CLEC4A 50856 broad.mit.edu hg19 12 8289395 8289395 + Missense_Mutation SNP C T TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx CLEC4A 50856 broad.mit.edu hg19 12 8290774 8290774 + Missense_Mutation SNP G A PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx PZP 5858 broad.mit.edu hg19 12 9311076 9311076 + Missense_Mutation SNP C T PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx CLEC1A 51267 broad.mit.edu hg19 12 10234003 10234003 + Missense_Mutation SNP T A TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx KLRD1 3824 CPCGene hg19 12 10462249 10462249 + Missense_Mutation SNP C T CPCG0003-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRB3 5544 broad.mit.edu hg19 12 11421037 11421037 + Missense_Mutation SNP C T TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx PRB4 5545 CPCGene hg19 12 11461549 11461549 + Missense_Mutation SNP G C CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRB4 5545 broad.mit.edu hg19 12 11461549 11461549 + Missense_Mutation SNP G C P08-1541 Unknown Somatic WGS Illumina GAIIx PRB4 5545 CPCGene hg19 12 11461549 11461549 + Missense_Mutation SNP G C CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRB4 5545 CPCGene hg19 12 11461553 11461553 + Missense_Mutation SNP T C CPCG0268-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRB4 5545 broad.mit.edu hg19 12 11461570 11461570 + Missense_Mutation SNP G T TCGA-EJ-7781-01 Unknown Somatic WXS Illumina GAIIx PRB4 5545 broad.mit.edu hg19 12 11461570 11461570 + Missense_Mutation SNP G T TCGA-J4-A83N-01 Unknown Somatic WXS Illumina GAIIx PRB4 5545 CPCGene hg19 12 11461570 11461570 + Missense_Mutation SNP G T CPCG0217-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRB4 5545 broad.mit.edu hg19 12 11461570 11461570 + Missense_Mutation SNP G T TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx PRB4 5545 broad.mit.edu hg19 12 11461580 11461580 + Missense_Mutation SNP T G TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx PRB4 5545 broad.mit.edu hg19 12 11461596 11461596 + Missense_Mutation SNP T G TCGA-XJ-A83G-01 Unknown Somatic WXS Illumina GAIIx ETV6 2120 broad.mit.edu hg19 12 11905467 11905467 + Missense_Mutation SNP A G P08-217 Unknown Somatic WGS Illumina GAIIx LRP6 4040 broad.mit.edu hg19 12 12397551 12397551 + Missense_Mutation SNP G T TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx CDKN1B 1027 CPCGene hg19 12 12871083 12871083 + Missense_Mutation SNP C T CPCG0354-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPRC5A 9052 broad.mit.edu hg19 12 13061954 13061954 + Missense_Mutation SNP G A TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx KIAA1467 0 broad.mit.edu hg19 12 13208628 13208628 + Missense_Mutation SNP G A TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx GRIN2B 2904 broad.mit.edu hg19 12 13716716 13716716 + Missense_Mutation SNP G A TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx GRIN2B 2904 broad.mit.edu hg19 12 13717418 13717418 + Missense_Mutation SNP C T PR-04-1243 Unknown Somatic WGS Illumina GAIIx GRIN2B 2904 broad.mit.edu hg19 12 13724857 13724857 + Missense_Mutation SNP C T P08-1541 Unknown Somatic WGS Illumina GAIIx GRIN2B 2904 CPCGene hg19 12 13906832 13906832 + Missense_Mutation SNP G A CPCG0081-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATF7IP 55729 CPCGene hg19 12 14577198 14577198 + Missense_Mutation SNP A G CPCG0263-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATF7IP 55729 broad.mit.edu hg19 12 14649241 14649241 + Missense_Mutation SNP G C TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx GUCY2C 2984 broad.mit.edu hg19 12 14804406 14804406 + Missense_Mutation SNP C G TCGA-J4-A67K-01 Unknown Somatic WXS Illumina GAIIx GUCY2C 2984 CPCGene hg19 12 14822738 14822738 + Missense_Mutation SNP G A CPCG0410-F1 Unknown Somatic WXS Illumina HiSeq 2500 ERP27 121506 broad.mit.edu hg19 12 15087910 15087910 + Missense_Mutation SNP T A PR-3043 Unknown Somatic WGS Illumina GAIIx RERG 85004 broad.mit.edu hg19 12 15273998 15273998 + Missense_Mutation SNP G A P08-590-Tumor Unknown Somatic WXS Illumina GAIIx PTPRO 5800 broad.mit.edu hg19 12 15710429 15710429 + Missense_Mutation SNP G T TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx LMO3 55885 CPCGene hg19 12 16753652 16753652 + Missense_Mutation SNP C T CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 PIK3C2G 5288 CPCGene hg19 12 18534755 18534755 + Missense_Mutation SNP G A CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 PLCZ1 89869 broad.mit.edu hg19 12 18872504 18872504 + Missense_Mutation SNP G C TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx SLCO1B1 10599 broad.mit.edu hg19 12 21350054 21350054 + Missense_Mutation SNP C A TCGA-CH-5746-01 Unknown Somatic WXS Illumina GAIIx SLCO1A2 6579 CPCGene hg19 12 21457408 21457408 + Missense_Mutation SNP G T CPCG0413-F1 Unknown Somatic WXS Illumina HiSeq 2500 RECQL 5965 broad.mit.edu hg19 12 21630844 21630844 + Missense_Mutation SNP T C TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx KCNJ8 3764 broad.mit.edu hg19 12 21926474 21926474 + Missense_Mutation SNP C T P06-1125-Tumor Unknown Somatic WXS Illumina GAIIx ABCC9 10060 broad.mit.edu hg19 12 22017391 22017391 + Missense_Mutation SNP G A PR-04-1243 Unknown Somatic WGS Illumina GAIIx ST8SIA1 6489 broad.mit.edu hg19 12 22354692 22354692 + Missense_Mutation SNP C A TCGA-J4-A67L-01 Unknown Somatic WXS Illumina GAIIx ETNK1 55500 broad.mit.edu hg19 12 22796887 22796887 + Missense_Mutation SNP G A TCGA-G9-6498-01 Unknown Somatic WXS Illumina GAIIx LRMP 4033 broad.mit.edu hg19 12 25259959 25259959 + Missense_Mutation SNP C A TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx ASUN 0 broad.mit.edu hg19 12 27066575 27066575 + Missense_Mutation SNP G A P07-837 Unknown Somatic WGS Illumina GAIIx ARNTL2 56938 broad.mit.edu hg19 12 27553667 27553667 + Missense_Mutation SNP C G TCGA-VP-A87C-01 Unknown Somatic WXS Illumina GAIIx CAPRIN2 65981 broad.mit.edu hg19 12 30884366 30884366 + Missense_Mutation SNP T A PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx DENND5B 160518 CPCGene hg19 12 31595730 31595730 + Missense_Mutation SNP G C CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 DENND5B 160518 CPCGene hg19 12 31632666 31632666 + Missense_Mutation SNP A T CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIAA1551 55196 CPCGene hg19 12 32136503 32136503 + Missense_Mutation SNP G T CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 DNM1L 10059 CPCGene hg19 12 32883958 32883958 + Missense_Mutation SNP G A CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 PKP2 5318 CPCGene hg19 12 32975506 32975506 + Missense_Mutation SNP G C CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 CPNE8 144402 CPCGene hg19 12 39047788 39047788 + Missense_Mutation SNP T G CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 CPNE8 144402 broad.mit.edu hg19 12 39047869 39047869 + Missense_Mutation SNP C T PR-08-556 Unknown Somatic WGS Illumina GAIIx KIF21A 55605 broad.mit.edu hg19 12 39727024 39727024 + Missense_Mutation SNP T C TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx MUC19 283463 broad.mit.edu hg19 12 40831954 40831954 + Missense_Mutation SNP T A P09-37 Unknown Somatic WGS Illumina GAIIx MUC19 283463 CPCGene hg19 12 40878659 40878659 + Missense_Mutation SNP G T CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 MUC19 283463 CPCGene hg19 12 40882603 40882603 + Missense_Mutation SNP G A CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 MUC19 283463 broad.mit.edu hg19 12 40929759 40929759 + Missense_Mutation SNP G A P08-492 Unknown Somatic WGS Illumina GAIIx MUC19 283463 broad.mit.edu hg19 12 40964311 40964311 + Missense_Mutation SNP C T P09-37 Unknown Somatic WGS Illumina GAIIx GXYLT1 283464 CPCGene hg19 12 42491833 42491833 + Missense_Mutation SNP A G CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRICKLE1 144165 broad.mit.edu hg19 12 42860182 42860182 + Missense_Mutation SNP T C TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx ADAMTS20 80070 broad.mit.edu hg19 12 43769300 43769300 + Missense_Mutation SNP A T P07-5021 Unknown Somatic WGS Illumina GAIIx ADAMTS20 80070 broad.mit.edu hg19 12 43793008 43793008 + Missense_Mutation SNP T A TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx ADAMTS20 80070 broad.mit.edu hg19 12 43819391 43819391 + Missense_Mutation SNP G T TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx ADAMTS20 80070 broad.mit.edu hg19 12 43825266 43825266 + Missense_Mutation SNP G A PR-02-254-Tumor Unknown Somatic WXS Illumina GAIIx ADAMTS20 80070 CPCGene hg19 12 43833861 43833861 + Missense_Mutation SNP C T CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAMTS20 80070 CPCGene hg19 12 43846489 43846489 + Missense_Mutation SNP G A CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAMTS20 80070 broad.mit.edu hg19 12 43944936 43944936 + Missense_Mutation SNP G A TCGA-J4-A67T-01 Unknown Somatic WXS Illumina GAIIx TWF1 5756 broad.mit.edu hg19 12 44189532 44189532 + Missense_Mutation SNP C A TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx TMEM117 84216 CPCGene hg19 12 44338074 44338074 + Missense_Mutation SNP C T CPCG0344-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANO6 196527 broad.mit.edu hg19 12 45741957 45741957 + Missense_Mutation SNP T A PR-2762-Tumor Unknown Somatic WXS Illumina GAIIx ARID2 196528 CPCGene hg19 12 46123679 46123679 + Missense_Mutation SNP G A CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 SCAF11 9169 CPCGene hg19 12 46316746 46316746 + Missense_Mutation SNP G A CPCG0346-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC38A1 81539 broad.mit.edu hg19 12 46594935 46594935 + Missense_Mutation SNP C T TCGA-CH-5790-01 Unknown Somatic WXS Illumina GAIIx SLC38A4 55089 broad.mit.edu hg19 12 47163194 47163194 + Missense_Mutation SNP G C TCGA-HC-7075-01 Unknown Somatic WGS Illumina GAIIx VDR 7421 EMBL hg19 12 48240585 48240585 + Missense_Mutation SNP G A EOPC-08 Unknown Somatic WGS Illumina HiSeq2000 PFKM 5213 broad.mit.edu hg19 12 48528541 48528541 + Missense_Mutation SNP G T P06-1125-Tumor Unknown Somatic WXS Illumina GAIIx ZNF641 121274 CPCGene hg19 12 48740983 48740983 + Missense_Mutation SNP C G CPCG0206-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF641 121274 broad.mit.edu hg19 12 48741844 48741844 + Missense_Mutation SNP C T TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx ADCY6 112 broad.mit.edu hg19 12 49176734 49176734 + Missense_Mutation SNP G A TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx CACNB3 784 CPCGene hg19 12 49217497 49217497 + Missense_Mutation SNP G A CPCG0183-F1 Unknown Somatic WXS Illumina HiSeq 2500 DDN 23109 broad.mit.edu hg19 12 49391533 49391533 + Missense_Mutation SNP C T TCGA-EJ-7314-01 Unknown Somatic WXS Illumina GAIIx DDN 23109 broad.mit.edu hg19 12 49391665 49391665 + Missense_Mutation SNP G A TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx PRKAG1 5571 broad.mit.edu hg19 12 49399105 49399105 + Missense_Mutation SNP T C TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx KMT2D 8085 CPCGene hg19 12 49427282 49427282 + Missense_Mutation SNP G A CPCG0246-F1 Unknown Somatic WXS Illumina HiSeq 2500 KMT2D 8085 CPCGene hg19 12 49434200 49434200 + Missense_Mutation SNP A G CPCG0191-F1 Unknown Somatic WXS Illumina HiSeq 2500 LMBR1L 55716 CPCGene hg19 12 49500744 49500744 + Missense_Mutation SNP C G CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 TROAP 10024 CPCGene hg19 12 49725355 49725355 + Splice_Site SNP G A CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 KCNH3 23416 broad.mit.edu hg19 12 49934916 49934916 + Splice_Site SNP G T TCGA-VN-A88M-01 Unknown Somatic WXS Illumina GAIIx KCNH3 23416 broad.mit.edu hg19 12 49951000 49951000 + Missense_Mutation SNP C T PR-00-1823-Tumor Unknown Somatic WXS Illumina GAIIx NCKAP5L 57701 broad.mit.edu hg19 12 50186731 50186731 + Missense_Mutation SNP C T TCGA-G9-6378-01 Unknown Somatic WXS Illumina GAIIx AQP2 359 broad.mit.edu hg19 12 50344881 50344881 + Missense_Mutation SNP G A TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx LIMA1 51474 broad.mit.edu hg19 12 50615864 50615864 + Missense_Mutation SNP A T PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx FAM186A 121006 CPCGene hg19 12 50744604 50744604 + Missense_Mutation SNP C T CPCG0374-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAM186A 121006 broad.mit.edu hg19 12 50745822 50745822 + Missense_Mutation SNP T G TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx FAM186A 121006 CPCGene hg19 12 50746243 50746243 + Missense_Mutation SNP T G CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 DIP2B 57609 broad.mit.edu hg19 12 51138473 51138473 + Missense_Mutation SNP G T TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx METTL7A 25840 broad.mit.edu hg19 12 51318927 51318927 + Missense_Mutation SNP T C TCGA-G9-6342-01 Unknown Somatic WXS Illumina GAIIx TFCP2 7024 CPCGene hg19 12 51492701 51492701 + Missense_Mutation SNP A C CPCG0259-F1 Unknown Somatic WXS Illumina HiSeq 2500 DAZAP2 9802 CPCGene hg19 12 51636366 51636366 + Missense_Mutation SNP C T CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC4A8 9498 broad.mit.edu hg19 12 51882523 51882523 + Missense_Mutation SNP G T TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx SCN8A 6334 broad.mit.edu hg19 12 52180349 52180349 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx SCN8A 6334 broad.mit.edu hg19 12 52200655 52200655 + Missense_Mutation SNP C T TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx SCN8A 6334 broad.mit.edu hg19 12 52200821 52200821 + Missense_Mutation SNP T G TCGA-EJ-7330-01 Unknown Somatic WXS Illumina GAIIx ACVR1B 91 broad.mit.edu hg19 12 52379005 52379005 + Missense_Mutation SNP A G TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx KRT83 3889 broad.mit.edu hg19 12 52715020 52715020 + Missense_Mutation SNP C T TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx KRT85 3891 broad.mit.edu hg19 12 52756045 52756045 + Missense_Mutation SNP C T TCGA-FC-7708-01 Unknown Somatic WXS Illumina GAIIx KRT84 3890 broad.mit.edu hg19 12 52777578 52777578 + Missense_Mutation SNP C T PR-08-4154 Unknown Somatic WGS Illumina GAIIx KRT82 3888 broad.mit.edu hg19 12 52797552 52797552 + Missense_Mutation SNP C T TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx KRT6A 3853 broad.mit.edu hg19 12 52881722 52881722 + Missense_Mutation SNP C T TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx KRT74 121391 broad.mit.edu hg19 12 52962144 52962144 + Missense_Mutation SNP G A PR-07-4610 Unknown Somatic WGS Illumina GAIIx KRT72 140807 broad.mit.edu hg19 12 52981585 52981585 + Missense_Mutation SNP G A P07-5318 Unknown Somatic WGS Illumina GAIIx KRT2 3849 broad.mit.edu hg19 12 53045615 53045615 + Missense_Mutation SNP A G TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx KRT2 3849 broad.mit.edu hg19 12 53045615 53045615 + Missense_Mutation SNP A G TCGA-EJ-7791-01 Unknown Somatic WGS Illumina GAIIx KRT1 3848 broad.mit.edu hg19 12 53073986 53073986 + Missense_Mutation SNP A G P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx KRT78 196374 broad.mit.edu hg19 12 53238345 53238345 + Missense_Mutation SNP T G TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx EIF4B 1975 CPCGene hg19 12 53421965 53421965 + Missense_Mutation SNP T A CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 TENC1 0 broad.mit.edu hg19 12 53457027 53457027 + Missense_Mutation SNP G A PR-3042 Unknown Somatic WGS Illumina GAIIx ITGB7 3695 CPCGene hg19 12 53590524 53590524 + Missense_Mutation SNP G A CPCG0213-F1 Unknown Somatic WXS Illumina HiSeq 2500 MFSD5 84975 CPCGene hg19 12 53647653 53647653 + Missense_Mutation SNP T C CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 ESPL1 9700 CPCGene hg19 12 53683341 53683341 + Missense_Mutation SNP G A CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 SP1 6667 broad.mit.edu hg19 12 53800405 53800405 + Missense_Mutation SNP G T P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx SP1 6667 broad.mit.edu hg19 12 53804756 53804756 + Missense_Mutation SNP G A TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx MAP3K12 7786 broad.mit.edu hg19 12 53878999 53878999 + Splice_Site SNP C G TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx CALCOCO1 57658 broad.mit.edu hg19 12 54118947 54118947 + Missense_Mutation SNP T C TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx ITGA5 3678 CPCGene hg19 12 54803024 54803024 + Missense_Mutation SNP C T CPCG0205-F1 Unknown Somatic WXS Illumina HiSeq 2500 NCKAP1L 3071 broad.mit.edu hg19 12 54902249 54902249 + Missense_Mutation SNP G A TCGA-VP-A87J-01 Unknown Somatic WXS Illumina GAIIx NEUROD4 58158 broad.mit.edu hg19 12 55420843 55420843 + Missense_Mutation SNP C T PR-06-1749 Unknown Somatic WGS Illumina GAIIx OR9K2 441639 broad.mit.edu hg19 12 55523685 55523685 + Missense_Mutation SNP C A TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx OR9K2 441639 broad.mit.edu hg19 12 55524135 55524135 + Missense_Mutation SNP G A TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx OR10A7 121364 broad.mit.edu hg19 12 55615590 55615590 + Missense_Mutation SNP G A PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx OR6C68 403284 broad.mit.edu hg19 12 55886860 55886860 + Missense_Mutation SNP A G PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx OR6C4 341418 broad.mit.edu hg19 12 55945169 55945169 + Missense_Mutation SNP C G TCGA-EJ-7123-01 Unknown Somatic WXS Illumina GAIIx ITGA7 3679 broad.mit.edu hg19 12 56092320 56092320 + Missense_Mutation SNP G A P09-37 Unknown Somatic WGS Illumina GAIIx ITGA7 3679 CPCGene hg19 12 56092630 56092630 + Missense_Mutation SNP C T CPCG0265-F1 Unknown Somatic WXS Illumina HiSeq 2500 DGKA 1606 broad.mit.edu hg19 12 56335369 56335369 + Splice_Site SNP G A TCGA-HC-A6AO-01 Unknown Somatic WXS Illumina GAIIx PMEL 6490 broad.mit.edu hg19 12 56350886 56350886 + Missense_Mutation SNP T C PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx CDK2 1017 broad.mit.edu hg19 12 56365358 56365358 + Missense_Mutation SNP T C TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx ERBB3 2065 broad.mit.edu hg19 12 56481841 56481841 + Missense_Mutation SNP C T TCGA-2A-A8VO-01 Unknown Somatic WXS Illumina GAIIx SMARCC2 6601 broad.mit.edu hg19 12 56558126 56558126 + Missense_Mutation SNP C G TCGA-HC-7740-01 Unknown Somatic WGS Illumina GAIIx SLC39A5 283375 broad.mit.edu hg19 12 56628745 56628745 + Missense_Mutation SNP T A TCGA-HC-8261-01 Unknown Somatic WXS Illumina GAIIx ANKRD52 283373 broad.mit.edu hg19 12 56647135 56647135 + Missense_Mutation SNP G A TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx PAN2 9924 broad.mit.edu hg19 12 56716932 56716932 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx TIMELESS 8914 broad.mit.edu hg19 12 56817470 56817470 + Missense_Mutation SNP C T TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx BAZ2A 11176 CPCGene hg19 12 56994494 56994494 + Missense_Mutation SNP G A CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 BAZ2A 11176 CPCGene hg19 12 56994495 56994495 + Missense_Mutation SNP C A CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATP5B 506 broad.mit.edu hg19 12 57037355 57037355 + Missense_Mutation SNP A T PR-04-3113-Tumor Unknown Somatic WXS Illumina GAIIx HSD17B6 8630 CPCGene hg19 12 57167752 57167752 + Missense_Mutation SNP C T CPCG0057-F1 Unknown Somatic WXS Illumina HiSeq 2500 LRP1 4035 CPCGene hg19 12 57571009 57571009 + Missense_Mutation SNP G A CPCG0413-F1 Unknown Somatic WXS Illumina HiSeq 2500 LRP1 4035 broad.mit.edu hg19 12 57592013 57592013 + Missense_Mutation SNP C A P04-594-Tumor Unknown Somatic WXS Illumina GAIIx SHMT2 6472 broad.mit.edu hg19 12 57626237 57626237 + Missense_Mutation SNP C T TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx STAC3 246329 CPCGene hg19 12 57641977 57641977 + Missense_Mutation SNP G C CPCG0090-F1 Unknown Somatic WXS Illumina HiSeq 2500 GLI1 2735 broad.mit.edu hg19 12 57864192 57864192 + Missense_Mutation SNP C T TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx ARHGAP9 64333 broad.mit.edu hg19 12 57872994 57872994 + Missense_Mutation SNP G A TCGA-VP-A87J-01 Unknown Somatic WXS Illumina GAIIx DCTN2 10540 broad.mit.edu hg19 12 57939879 57939879 + Missense_Mutation SNP C G PR-3051-Tumor Unknown Somatic WXS Illumina GAIIx KIF5A 3798 broad.mit.edu hg19 12 57957899 57957899 + Missense_Mutation SNP G A TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx ARHGEF25 115557 broad.mit.edu hg19 12 58009351 58009351 + Missense_Mutation SNP G A PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx B4GALNT1 2583 CPCGene hg19 12 58023950 58023950 + Missense_Mutation SNP T C CPCG0210-F1 Unknown Somatic WXS Illumina HiSeq 2500 AGAP2 116986 broad.mit.edu hg19 12 58135772 58135772 + Missense_Mutation SNP C T PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx MARCH9 92979 CPCGene hg19 12 58149661 58149661 + Missense_Mutation SNP C T CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 CYP27B1 1594 broad.mit.edu hg19 12 58158697 58158697 + Missense_Mutation SNP A G TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx CYP27B1 1594 broad.mit.edu hg19 12 58159257 58159257 + Missense_Mutation SNP G A TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx LRIG3 121227 CPCGene hg19 12 59266543 59266543 + Missense_Mutation SNP T C CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 USP15 9958 broad.mit.edu hg19 12 62777707 62777707 + Missense_Mutation SNP A C TCGA-EJ-7794-01 Unknown Somatic WXS Illumina GAIIx MON2 23041 broad.mit.edu hg19 12 62902191 62902191 + Missense_Mutation SNP A G TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx MON2 23041 CPCGene hg19 12 62960218 62960218 + Missense_Mutation SNP G A CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 DPY19L2 283417 broad.mit.edu hg19 12 63976243 63976243 + Missense_Mutation SNP T C TCGA-EJ-5527-01 Unknown Somatic WXS Illumina GAIIx SRGAP1 57522 broad.mit.edu hg19 12 64491145 64491145 + Missense_Mutation SNP T G TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx SRGAP1 57522 CPCGene hg19 12 64502780 64502780 + Missense_Mutation SNP C G CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 LEMD3 23592 CPCGene hg19 12 65639455 65639455 + Missense_Mutation SNP A G CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 MSRB3 253827 broad.mit.edu hg19 12 65856970 65856970 + Missense_Mutation SNP G A PR-01-2492-Tumor Unknown Somatic WXS Illumina GAIIx IRAK3 11213 broad.mit.edu hg19 12 66620595 66620595 + Missense_Mutation SNP T A TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx HELB 92797 broad.mit.edu hg19 12 66703846 66703846 + Missense_Mutation SNP G A TCGA-J4-A67Q-01 Unknown Somatic WXS Illumina GAIIx GRIP1 23426 broad.mit.edu hg19 12 66923625 66923625 + Missense_Mutation SNP C G P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx CAND1 55832 broad.mit.edu hg19 12 67700267 67700267 + Missense_Mutation SNP G T PR-2762-Tumor Unknown Somatic WXS Illumina GAIIx CAND1 55832 broad.mit.edu hg19 12 67700301 67700301 + Missense_Mutation SNP T C TCGA-EJ-7330-01 Unknown Somatic WXS Illumina GAIIx CCT2 10576 broad.mit.edu hg19 12 69985925 69985925 + Missense_Mutation SNP A T TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx CCT2 10576 broad.mit.edu hg19 12 69986785 69986785 + Missense_Mutation SNP T C TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx BEST3 144453 broad.mit.edu hg19 12 70066668 70066668 + Missense_Mutation SNP C T PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx BEST3 144453 broad.mit.edu hg19 12 70091546 70091546 + Missense_Mutation SNP A T TCGA-G9-6342-01 Unknown Somatic WXS Illumina GAIIx CNOT2 4848 broad.mit.edu hg19 12 70723332 70723332 + Missense_Mutation SNP C T TCGA-G9-6338-01 Unknown Somatic WXS Illumina GAIIx PTPRB 5787 broad.mit.edu hg19 12 70983954 70983954 + Missense_Mutation SNP C A P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx LGR5 8549 broad.mit.edu hg19 12 71977709 71977709 + Missense_Mutation SNP T C TCGA-G9-6385-01 Unknown Somatic WXS Illumina GAIIx LGR5 8549 broad.mit.edu hg19 12 71978097 71978097 + Missense_Mutation SNP C A TCGA-J4-A83K-01 Unknown Somatic WXS Illumina GAIIx RAB21 23011 broad.mit.edu hg19 12 72164411 72164411 + Missense_Mutation SNP A C P09-1580-Tumor Unknown Somatic WXS Illumina GAIIx TRHDE 29953 CPCGene hg19 12 72969157 72969157 + Missense_Mutation SNP C T CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 TRHDE 29953 CPCGene hg19 12 73012760 73012760 + Missense_Mutation SNP G A CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 KCNC2 3747 broad.mit.edu hg19 12 75601229 75601229 + Missense_Mutation SNP G A PR-04-1243 Unknown Somatic WGS Illumina GAIIx BBS10 79738 broad.mit.edu hg19 12 76740951 76740951 + Missense_Mutation SNP C T TCGA-G9-6364-01 Unknown Somatic WXS Illumina GAIIx OSBPL8 114882 CPCGene hg19 12 76763498 76763498 + Missense_Mutation SNP C T CPCG0341-F1 Unknown Somatic WXS Illumina HiSeq 2500 E2F7 144455 broad.mit.edu hg19 12 77419608 77419608 + Missense_Mutation SNP C T TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx E2F7 144455 CPCGene hg19 12 77438459 77438459 + Missense_Mutation SNP T C CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 NAV3 89795 broad.mit.edu hg19 12 78362364 78362364 + Missense_Mutation SNP C T TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx NAV3 89795 CPCGene hg19 12 78583901 78583901 + Missense_Mutation SNP T A CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 OTOGL 283310 broad.mit.edu hg19 12 80632642 80632642 + Missense_Mutation SNP G C P08-1042 Unknown Somatic WGS Illumina GAIIx OTOGL 283310 broad.mit.edu hg19 12 80647295 80647295 + Missense_Mutation SNP C T TCGA-VP-A87C-01 Unknown Somatic WXS Illumina GAIIx OTOGL 283310 broad.mit.edu hg19 12 80650233 80650233 + Missense_Mutation SNP C A TCGA-EJ-7793-01 Unknown Somatic WXS Illumina GAIIx OTOGL 283310 broad.mit.edu hg19 12 80658832 80658832 + Missense_Mutation SNP G T TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx PTPRQ 374462 CPCGene hg19 12 80936560 80936560 + Missense_Mutation SNP T C CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 METTL25 84190 CPCGene hg19 12 82792961 82792961 + Missense_Mutation SNP T C CPCG0365-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMTC2 160335 broad.mit.edu hg19 12 83251221 83251221 + Missense_Mutation SNP C G TCGA-HC-8259-01 Unknown Somatic WXS Illumina GAIIx TSPAN19 144448 broad.mit.edu hg19 12 85411291 85411291 + Missense_Mutation SNP T A P08-1042 Unknown Somatic WGS Illumina GAIIx MGAT4C 25834 broad.mit.edu hg19 12 86373542 86373542 + Missense_Mutation SNP G A TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx CEP290 80184 CPCGene hg19 12 88512320 88512320 + Missense_Mutation SNP C T CPCG0357-F1 Unknown Somatic WXS Illumina HiSeq 2500 EPYC 1833 CPCGene hg19 12 91358079 91358079 + Missense_Mutation SNP C T CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 VEZT 55591 CPCGene hg19 12 95694037 95694037 + Missense_Mutation SNP A G CPCG0238-F1 Unknown Somatic WXS Illumina HiSeq 2500 METAP2 10988 broad.mit.edu hg19 12 95888909 95888909 + Missense_Mutation SNP T C TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx NTN4 59277 CPCGene hg19 12 96104339 96104339 + Missense_Mutation SNP G A CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 LTA4H 4048 CPCGene hg19 12 96414909 96414909 + Missense_Mutation SNP T C CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 IKBIP 121457 broad.mit.edu hg19 12 99007742 99007742 + Missense_Mutation SNP G A TCGA-VN-A88O-01 Unknown Somatic WXS Illumina GAIIx FAM71C 196472 broad.mit.edu hg19 12 100042107 100042107 + Missense_Mutation SNP A G TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx UHRF1BP1L 23074 broad.mit.edu hg19 12 100452768 100452768 + Missense_Mutation SNP A G TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx SLC17A8 246213 CPCGene hg19 12 100811839 100811839 + Missense_Mutation SNP C T CPCG0336-F1 Unknown Somatic WXS Illumina HiSeq 2500 NR1H4 9971 EMBL hg19 12 100934592 100934592 + Missense_Mutation SNP T C EOPC-10 Unknown Somatic WGS Illumina HiSeq2000 GAS2L3 283431 broad.mit.edu hg19 12 101018144 101018144 + Missense_Mutation SNP A C PR-09-5702-Tumor Unknown Somatic WXS Illumina GAIIx ANO4 121601 broad.mit.edu hg19 12 101433785 101433785 + Missense_Mutation SNP G A TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx ANO4 121601 CPCGene hg19 12 101433820 101433820 + Missense_Mutation SNP G A CPCG0087-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANO4 121601 CPCGene hg19 12 101514342 101514342 + Missense_Mutation SNP G T CPCG0205-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC5A8 160728 CPCGene hg19 12 101587404 101587404 + Missense_Mutation SNP T G CPCG0255-F1 Unknown Somatic WXS Illumina HiSeq 2500 UTP20 27340 CPCGene hg19 12 101767383 101767383 + Missense_Mutation SNP C T CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPIC 121599 broad.mit.edu hg19 12 101876611 101876611 + Missense_Mutation SNP A G TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx MYBPC1 4604 broad.mit.edu hg19 12 102072013 102072013 + Missense_Mutation SNP T A TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx STAB2 55576 broad.mit.edu hg19 12 104031811 104031811 + Missense_Mutation SNP C T PR-09-5630-Tumor Unknown Somatic WXS Illumina GAIIx STAB2 55576 broad.mit.edu hg19 12 104046416 104046416 + Missense_Mutation SNP A G TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx TDG 6996 broad.mit.edu hg19 12 104373710 104373710 + Missense_Mutation SNP A G TCGA-G9-6385-01 Unknown Somatic WXS Illumina GAIIx TXNRD1 7296 broad.mit.edu hg19 12 104742131 104742131 + Missense_Mutation SNP G T TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx KIAA1033 0 CPCGene hg19 12 105558504 105558504 + Missense_Mutation SNP A C CPCG0206-F1 Unknown Somatic WXS Illumina HiSeq 2500 RFX4 5992 broad.mit.edu hg19 12 106995113 106995113 + Missense_Mutation SNP G A P07-5318 Unknown Somatic WGS Illumina GAIIx MTERF2 80298 broad.mit.edu hg19 12 107371603 107371603 + Missense_Mutation SNP G A TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx SELPLG 6404 broad.mit.edu hg19 12 109017673 109017673 + Missense_Mutation SNP C T TCGA-EJ-7786-01 Unknown Somatic WXS Illumina GAIIx SSH1 54434 CPCGene hg19 12 109251239 109251239 + Missense_Mutation SNP G C CPCG0124-F1 Unknown Somatic WXS Illumina HiSeq 2500 DAO 1610 broad.mit.edu hg19 12 109286790 109286790 + Missense_Mutation SNP G A TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx DAO 1610 broad.mit.edu hg19 12 109288095 109288095 + Missense_Mutation SNP G A TCGA-EJ-7325-01 Unknown Somatic WXS Illumina GAIIx DAO 1610 broad.mit.edu hg19 12 109290787 109290787 + Missense_Mutation SNP C T TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx ACACB 32 broad.mit.edu hg19 12 109665228 109665228 + Missense_Mutation SNP G A P08-501 Unknown Somatic WGS Illumina GAIIx GIT2 9815 broad.mit.edu hg19 12 110383093 110383093 + Missense_Mutation SNP G T TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx ATP2A2 488 broad.mit.edu hg19 12 110765384 110765384 + Missense_Mutation SNP T A TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx ATP2A2 488 broad.mit.edu hg19 12 110778470 110778470 + Missense_Mutation SNP C A P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx ARPC3 10094 broad.mit.edu hg19 12 110883268 110883268 + Missense_Mutation SNP G C PR-2525 Unknown Somatic WGS Illumina GAIIx ARPC3 10094 CPCGene hg19 12 110883336 110883336 + Missense_Mutation SNP C T CPCG0356-F1 Unknown Somatic WXS Illumina HiSeq 2500 CUX2 23316 broad.mit.edu hg19 12 111736385 111736385 + Missense_Mutation SNP G A PR-03-1026-Tumor Unknown Somatic WXS Illumina GAIIx SH2B3 10019 broad.mit.edu hg19 12 111885274 111885274 + Missense_Mutation SNP G A TCGA-J4-8200-01 Unknown Somatic WXS Illumina GAIIx ATXN2 6311 broad.mit.edu hg19 12 111954061 111954061 + Missense_Mutation SNP C A TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx BRAP 8315 broad.mit.edu hg19 12 112119532 112119532 + Missense_Mutation SNP G C P04-594-Tumor Unknown Somatic WXS Illumina GAIIx ACAD10 80724 broad.mit.edu hg19 12 112186219 112186219 + Missense_Mutation SNP G T TCGA-XJ-A83G-01 Unknown Somatic WXS Illumina GAIIx ALDH2 217 broad.mit.edu hg19 12 112237730 112237730 + Missense_Mutation SNP G A TCGA-EJ-7123-01 Unknown Somatic WXS Illumina GAIIx MAPKAPK5 8550 CPCGene hg19 12 112303985 112303985 + Missense_Mutation SNP G T CPCG0087-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAPKAPK5 8550 broad.mit.edu hg19 12 112326400 112326400 + Missense_Mutation SNP C G TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx NAA25 80018 CPCGene hg19 12 112516022 112516022 + Missense_Mutation SNP C A CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 HECTD4 283450 broad.mit.edu hg19 12 112632752 112632752 + Missense_Mutation SNP G A TCGA-J4-8200-01 Unknown Somatic WXS Illumina GAIIx HECTD4 283450 CPCGene hg19 12 112707557 112707557 + Missense_Mutation SNP T C CPCG0269-F1 Unknown Somatic WXS Illumina HiSeq 2500 OAS2 4939 broad.mit.edu hg19 12 113442841 113442841 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx OAS2 4939 CPCGene hg19 12 113448182 113448182 + Missense_Mutation SNP A G CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 DTX1 1840 broad.mit.edu hg19 12 113531507 113531507 + Splice_Site SNP T A PR-09-3566-Tumor Unknown Somatic WXS Illumina GAIIx RASAL1 8437 broad.mit.edu hg19 12 113544983 113544983 + Missense_Mutation SNP G T TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx IQCD 115811 CPCGene hg19 12 113645795 113645795 + Missense_Mutation SNP C T CPCG0232-F1 Unknown Somatic WXS Illumina HiSeq 2500 TPCN1 53373 broad.mit.edu hg19 12 113733848 113733848 + Missense_Mutation SNP A T TCGA-EJ-5517-01 Unknown Somatic WXS Illumina GAIIx SLC8B1 80024 broad.mit.edu hg19 12 113748108 113748108 + Missense_Mutation SNP G T TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx LHX5 64211 CPCGene hg19 12 113901337 113901337 + Missense_Mutation SNP C A CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 TBX5 6910 CPCGene hg19 12 114804018 114804018 + Missense_Mutation SNP G A CPCG0263-F1 Unknown Somatic WXS Illumina HiSeq 2500 TBX5 6910 broad.mit.edu hg19 12 114841632 114841632 + Missense_Mutation SNP G A TCGA-J4-A6M7-01 Unknown Somatic WXS Illumina GAIIx MED13L 23389 CPCGene hg19 12 116408572 116408572 + Missense_Mutation SNP G A CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 MED13L 23389 broad.mit.edu hg19 12 116446812 116446812 + Missense_Mutation SNP G A TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx MED13L 23389 CPCGene hg19 12 116457631 116457631 + Missense_Mutation SNP C T CPCG0087-F1 Unknown Somatic WXS Illumina HiSeq 2500 NOS1 4842 broad.mit.edu hg19 12 117665244 117665244 + Missense_Mutation SNP C T P04-1084 Unknown Somatic WGS Illumina GAIIx NOS1 4842 broad.mit.edu hg19 12 117669899 117669899 + Missense_Mutation SNP C T PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx KSR2 283455 broad.mit.edu hg19 12 118405932 118405932 + Missense_Mutation SNP G C PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx SRRM4 84530 CPCGene hg19 12 119568487 119568487 + Missense_Mutation SNP C T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 SRRM4 84530 broad.mit.edu hg19 12 119592130 119592130 + Missense_Mutation SNP C A TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx CCDC60 160777 broad.mit.edu hg19 12 119968789 119968789 + Missense_Mutation SNP G A PR-09-2517-Tumor Unknown Somatic WXS Illumina GAIIx GCN1L1 0 CPCGene hg19 12 120572477 120572477 + Missense_Mutation SNP T A CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 GCN1L1 0 CPCGene hg19 12 120594388 120594388 + Missense_Mutation SNP C A CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 GCN1L1 0 broad.mit.edu hg19 12 120615277 120615277 + Missense_Mutation SNP G A TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx RPLP0 6175 broad.mit.edu hg19 12 120635152 120635152 + Missense_Mutation SNP C T TCGA-EJ-5510-01 Unknown Somatic WXS Illumina GAIIx ANAPC5 51433 broad.mit.edu hg19 12 121766164 121766164 + Missense_Mutation SNP A G TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx RNF34 80196 CPCGene hg19 12 121855412 121855412 + Missense_Mutation SNP C G CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 KDM2B 84678 CPCGene hg19 12 121880592 121880592 + Missense_Mutation SNP C T CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 WDR66 144406 broad.mit.edu hg19 12 122441613 122441613 + Missense_Mutation SNP C T TCGA-HC-A6AO-01 Unknown Somatic WXS Illumina GAIIx LRRC43 254050 broad.mit.edu hg19 12 122685876 122685876 + Missense_Mutation SNP G C TCGA-2A-A8W1-01 Unknown Somatic WXS Illumina GAIIx CLIP1 6249 broad.mit.edu hg19 12 122839821 122839821 + Missense_Mutation SNP G A PR-STID0000002872 Unknown Somatic WGS Illumina GAIIx MPHOSPH9 10198 CPCGene hg19 12 123687494 123687494 + Missense_Mutation SNP A G CPCG0124-F1 Unknown Somatic WXS Illumina HiSeq 2500 SBNO1 55206 broad.mit.edu hg19 12 123813301 123813301 + Missense_Mutation SNP C A PR-08-784 Unknown Somatic WGS Illumina GAIIx DDX55 57696 broad.mit.edu hg19 12 124094551 124094551 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx TCTN2 79867 broad.mit.edu hg19 12 124171425 124171425 + Missense_Mutation SNP T G PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx TCTN2 79867 broad.mit.edu hg19 12 124171429 124171429 + Missense_Mutation SNP C A TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx DNAH10 196385 CPCGene hg19 12 124364184 124364184 + Missense_Mutation SNP C A CPCG0410-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCDC92 80212 CPCGene hg19 12 124422259 124422259 + Missense_Mutation SNP C G CPCG0122-F1 Unknown Somatic WXS Illumina HiSeq 2500 NCOR2 9612 broad.mit.edu hg19 12 124821486 124821486 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx NCOR2 9612 broad.mit.edu hg19 12 124838668 124838668 + Missense_Mutation SNP C T PR-02-1082-Tumor Unknown Somatic WXS Illumina GAIIx NCOR2 9612 broad.mit.edu hg19 12 124957597 124957597 + Missense_Mutation SNP C T PR-02-2072-Tumor Unknown Somatic WXS Illumina GAIIx TMEM132B 114795 CPCGene hg19 12 126135236 126135236 + Missense_Mutation SNP C T CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMEM132B 114795 broad.mit.edu hg19 12 126138738 126138738 + Missense_Mutation SNP G A TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx TMEM132B 114795 CPCGene hg19 12 126138738 126138738 + Missense_Mutation SNP G A CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMEM132B 114795 broad.mit.edu hg19 12 126138738 126138738 + Missense_Mutation SNP G A TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx TMEM132D 121256 broad.mit.edu hg19 12 130184522 130184522 + Missense_Mutation SNP G A TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx TMEM132D 121256 broad.mit.edu hg19 12 130184667 130184667 + Missense_Mutation SNP G A P07-684-Tumor Unknown Somatic WXS Illumina GAIIx FZD10 11211 broad.mit.edu hg19 12 130648207 130648207 + Missense_Mutation SNP C T P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx PIWIL1 9271 broad.mit.edu hg19 12 130830316 130830316 + Missense_Mutation SNP G A TCGA-G9-6379-01 Unknown Somatic WXS Illumina GAIIx PIWIL1 9271 broad.mit.edu hg19 12 130830351 130830351 + Missense_Mutation SNP C T TCGA-2A-A8VO-01 Unknown Somatic WXS Illumina GAIIx PIWIL1 9271 broad.mit.edu hg19 12 130840152 130840152 + Missense_Mutation SNP C A TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx PIWIL1 9271 broad.mit.edu hg19 12 130845793 130845793 + Missense_Mutation SNP T G TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx RIMBP2 23504 broad.mit.edu hg19 12 130927140 130927140 + Missense_Mutation SNP C T PR-3042 Unknown Somatic WGS Illumina GAIIx RIMBP2 23504 CPCGene hg19 12 130935740 130935740 + Missense_Mutation SNP G A CPCG0342-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPR133 0 CPCGene hg19 12 131590356 131590356 + Missense_Mutation SNP C T CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 MMP17 4326 broad.mit.edu hg19 12 132322841 132322841 + Missense_Mutation SNP G A TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx MMP17 4326 broad.mit.edu hg19 12 132329952 132329952 + Missense_Mutation SNP G A TCGA-EJ-7325-01 Unknown Somatic WXS Illumina GAIIx EP400 57634 CPCGene hg19 12 132496075 132496075 + Missense_Mutation SNP A G CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 EP400 57634 broad.mit.edu hg19 12 132547093 132547093 + Missense_Mutation SNP A G TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx GALNT9 50614 CPCGene hg19 12 132837563 132837563 + Missense_Mutation SNP A C CPCG0241-F1 Unknown Somatic WXS Illumina HiSeq 2500 P2RX2 22953 broad.mit.edu hg19 12 133197642 133197642 + Missense_Mutation SNP C G P07-684-Tumor Unknown Somatic WXS Illumina GAIIx P2RX2 22953 broad.mit.edu hg19 12 133198274 133198274 + Missense_Mutation SNP T G P05-620 Unknown Somatic WGS Illumina GAIIx POLE 5426 CPCGene hg19 12 133220022 133220022 + Missense_Mutation SNP G C CPCG0057-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF140 7699 broad.mit.edu hg19 12 133683237 133683237 + Missense_Mutation SNP A C TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx ANHX 647589 CPCGene hg19 12 133803668 133803668 + Missense_Mutation SNP C T CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 TUBA3C 7278 broad.mit.edu hg19 13 19748209 19748209 + Missense_Mutation SNP C T TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx TUBA3C 7278 broad.mit.edu hg19 13 19748253 19748253 + Missense_Mutation SNP A T TCGA-EJ-7327-01 Unknown Somatic WXS Illumina GAIIx TUBA3C 7278 broad.mit.edu hg19 13 19748273 19748273 + Missense_Mutation SNP C T PR-09-5700-Tumor Unknown Somatic WXS Illumina GAIIx TUBA3C 7278 broad.mit.edu hg19 13 19751301 19751301 + Missense_Mutation SNP C T P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx TPTE2 93492 broad.mit.edu hg19 13 20067611 20067611 + Missense_Mutation SNP G A TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx PSPC1 55269 CPCGene hg19 13 20356668 20356668 + Missense_Mutation SNP G C CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZMYM2 7750 broad.mit.edu hg19 13 20577166 20577166 + Missense_Mutation SNP C G P04-2740-Tumor Unknown Somatic WXS Illumina GAIIx XPO4 64328 broad.mit.edu hg19 13 21417934 21417934 + Missense_Mutation SNP T A TCGA-EJ-A46I-01 Unknown Somatic WXS Illumina GAIIx FGF9 2254 CPCGene hg19 13 22275507 22275507 + Missense_Mutation SNP T G CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 SGCG 6445 broad.mit.edu hg19 13 23824808 23824808 + Missense_Mutation SNP G T P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx SPATA13 221178 broad.mit.edu hg19 13 24852919 24852919 + Missense_Mutation SNP A T TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx SPATA13 221178 broad.mit.edu hg19 13 24876905 24876905 + Missense_Mutation SNP G A P08-716 Unknown Somatic WGS Illumina GAIIx RNF17 56163 broad.mit.edu hg19 13 25348980 25348980 + Missense_Mutation SNP C T TCGA-ZG-A8QX-01 Unknown Somatic WXS Illumina GAIIx RNF17 56163 broad.mit.edu hg19 13 25416253 25416253 + Missense_Mutation SNP A G TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx PABPC3 5042 broad.mit.edu hg19 13 25671274 25671274 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx ATP8A2 51761 CPCGene hg19 13 26343356 26343356 + Missense_Mutation SNP G A CPCG0324-F1 Unknown Somatic WXS Illumina HiSeq 2500 SHISA2 387914 broad.mit.edu hg19 13 26620748 26620748 + Missense_Mutation SNP G T PR-2858-Tumor Unknown Somatic WXS Illumina GAIIx WASF3 10810 broad.mit.edu hg19 13 27256797 27256797 + Missense_Mutation SNP C T TCGA-EJ-5522-01 Unknown Somatic WXS Illumina GAIIx URAD 646625 broad.mit.edu hg19 13 28562733 28562733 + Missense_Mutation SNP G A TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx FLT1 2321 broad.mit.edu hg19 13 28919630 28919630 + Missense_Mutation SNP C T TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx FLT1 2321 CPCGene hg19 13 29008056 29008056 + Missense_Mutation SNP C T CPCG0357-F1 Unknown Somatic WXS Illumina HiSeq 2500 POMP 51371 broad.mit.edu hg19 13 29242675 29242675 + Missense_Mutation SNP G A TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx MTUS2 23281 CPCGene hg19 13 29600313 29600313 + Missense_Mutation SNP G A CPCG0199-F1 Unknown Somatic WXS Illumina HiSeq 2500 MTUS2 23281 broad.mit.edu hg19 13 29600584 29600584 + Missense_Mutation SNP G A TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx KATNAL1 84056 CPCGene hg19 13 30815219 30815219 + Missense_Mutation SNP C T CPCG0047-F1 Unknown Somatic WXS Illumina HiSeq 2500 HSPH1 10808 CPCGene hg19 13 31727039 31727039 + Missense_Mutation SNP G A CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 RXFP2 122042 broad.mit.edu hg19 13 32351551 32351551 + Missense_Mutation SNP G A PR-03-3125 Unknown Somatic WGS Illumina GAIIx FRY 10129 broad.mit.edu hg19 13 32761791 32761791 + Missense_Mutation SNP C T TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx PDS5B 23047 broad.mit.edu hg19 13 33273990 33273990 + Missense_Mutation SNP A G PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx STARD13 90627 broad.mit.edu hg19 13 33686933 33686933 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx NBEA 26960 CPCGene hg19 13 35756495 35756495 + Splice_Site SNP A G CPCG0342-F1 Unknown Somatic WXS Illumina HiSeq 2500 NBEA 26960 broad.mit.edu hg19 13 36167490 36167490 + Missense_Mutation SNP A G P08-492 Unknown Somatic WGS Illumina GAIIx DCLK1 9201 broad.mit.edu hg19 13 36367519 36367519 + Missense_Mutation SNP C T P03-871-Tumor Unknown Somatic WXS Illumina GAIIx SPG20 23111 broad.mit.edu hg19 13 36909239 36909239 + Missense_Mutation SNP C T PR-09-2517-Tumor Unknown Somatic WXS Illumina GAIIx SPG20 23111 CPCGene hg19 13 36909752 36909752 + Missense_Mutation SNP T A CPCG0262-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCNA1 8900 broad.mit.edu hg19 13 37006834 37006834 + Missense_Mutation SNP G A TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx POSTN 10631 broad.mit.edu hg19 13 38158190 38158190 + Missense_Mutation SNP G T TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx TRPC4 7223 CPCGene hg19 13 38211372 38211372 + Missense_Mutation SNP A C CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 TRPC4 7223 broad.mit.edu hg19 13 38211582 38211582 + Missense_Mutation SNP C G TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx FREM2 341640 CPCGene hg19 13 39262079 39262079 + Missense_Mutation SNP C T CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 FREM2 341640 CPCGene hg19 13 39264415 39264415 + Missense_Mutation SNP C T CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 FREM2 341640 broad.mit.edu hg19 13 39357242 39357242 + Missense_Mutation SNP G A TCGA-EJ-5510-01 Unknown Somatic WXS Illumina GAIIx FREM2 341640 broad.mit.edu hg19 13 39433455 39433455 + Missense_Mutation SNP A T P00-000450-Tumor Unknown Somatic WXS Illumina GAIIx STOML3 161003 broad.mit.edu hg19 13 39542593 39542593 + Missense_Mutation SNP G A PR-04-1243 Unknown Somatic WGS Illumina GAIIx MTRF1 9617 CPCGene hg19 13 41800702 41800702 + Missense_Mutation SNP G T CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 VWA8 23078 broad.mit.edu hg19 13 42259307 42259307 + Missense_Mutation SNP G A TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx VWA8 23078 broad.mit.edu hg19 13 42273390 42273390 + Missense_Mutation SNP A C TCGA-2A-A8W1-01 Unknown Somatic WXS Illumina GAIIx VWA8 23078 CPCGene hg19 13 42457533 42457533 + Missense_Mutation SNP C A CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 ENOX1 55068 broad.mit.edu hg19 13 43872565 43872565 + Missense_Mutation SNP C A TCGA-G9-6363-01 Unknown Somatic WXS Illumina GAIIx TSC22D1 8848 broad.mit.edu hg19 13 45148696 45148696 + Missense_Mutation SNP T C TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx NUFIP1 26747 broad.mit.edu hg19 13 45533530 45533530 + Missense_Mutation SNP A C TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx GPALPP1 55425 broad.mit.edu hg19 13 45601996 45601996 + Missense_Mutation SNP A T P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx COG3 83548 broad.mit.edu hg19 13 46083839 46083839 + Missense_Mutation SNP C A PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx SIAH3 283514 broad.mit.edu hg19 13 46357972 46357972 + Missense_Mutation SNP C T TCGA-HC-7748-01 Unknown Somatic WXS Illumina GAIIx ZC3H13 23091 CPCGene hg19 13 46537977 46537977 + Missense_Mutation SNP C T CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZC3H13 23091 CPCGene hg19 13 46559572 46559572 + Missense_Mutation SNP C T CPCG0355-F1 Unknown Somatic WXS Illumina HiSeq 2500 CPB2 1361 EMBL hg19 13 46627845 46627845 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 LCP1 3936 broad.mit.edu hg19 13 46733779 46733779 + Missense_Mutation SNP A G TCGA-ZG-A8QX-01 Unknown Somatic WXS Illumina GAIIx KIAA0226L 0 EMBL hg19 13 46924397 46924397 + Missense_Mutation SNP G A EOPC-07 Unknown Somatic WGS Illumina HiSeq2000 KIAA0226L 0 CPCGene hg19 13 46942917 46942917 + Missense_Mutation SNP G A CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 LRCH1 23143 CPCGene hg19 13 47260163 47260163 + Missense_Mutation SNP C A CPCG0191-F1 Unknown Somatic WXS Illumina HiSeq 2500 LRCH1 23143 broad.mit.edu hg19 13 47266692 47266692 + Missense_Mutation SNP A G TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx LRCH1 23143 broad.mit.edu hg19 13 47269054 47269054 + Missense_Mutation SNP G T TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx RB1 5925 broad.mit.edu hg19 13 48934221 48934221 + Missense_Mutation SNP T C TCGA-EJ-7330-01 Unknown Somatic WXS Illumina GAIIx RB1 5925 broad.mit.edu hg19 13 48941653 48941653 + Missense_Mutation SNP C T TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx LPAR6 10161 broad.mit.edu hg19 13 48986139 48986139 + Missense_Mutation SNP A G P04-1084 Unknown Somatic WGS Illumina GAIIx MLNR 2862 broad.mit.edu hg19 13 49794536 49794536 + Missense_Mutation SNP G A PR-STID0000002872 Unknown Somatic WGS Illumina GAIIx ARL11 115761 broad.mit.edu hg19 13 50204590 50204590 + Missense_Mutation SNP T A PR-3042 Unknown Somatic WGS Illumina GAIIx KCNRG 283518 broad.mit.edu hg19 13 50594457 50594457 + Missense_Mutation SNP G T TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx FAM124A 220108 broad.mit.edu hg19 13 51825914 51825914 + Missense_Mutation SNP C T TCGA-J4-A67R-01 Unknown Somatic WXS Illumina GAIIx NEK5 341676 broad.mit.edu hg19 13 52661539 52661539 + Missense_Mutation SNP T G TCGA-EJ-5504-01 Unknown Somatic WXS Illumina GAIIx VPS36 51028 CPCGene hg19 13 53013272 53013272 + Missense_Mutation SNP A G CPCG0087-F1 Unknown Somatic WXS Illumina HiSeq 2500 LECT1 0 broad.mit.edu hg19 13 53286893 53286893 + Missense_Mutation SNP C G TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx OLFM4 10562 CPCGene hg19 13 53608520 53608520 + Missense_Mutation SNP G A CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 OLFM4 10562 broad.mit.edu hg19 13 53624777 53624777 + Missense_Mutation SNP C G TCGA-EJ-7321-01 Unknown Somatic WXS Illumina GAIIx PCDH17 27253 broad.mit.edu hg19 13 58207456 58207456 + Missense_Mutation SNP G T TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx DIAPH3 81624 broad.mit.edu hg19 13 60565296 60565296 + Missense_Mutation SNP T C TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx PCDH20 64881 CPCGene hg19 13 61986430 61986430 + Missense_Mutation SNP T A CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 BORA 79866 CPCGene hg19 13 73302366 73302366 + Missense_Mutation SNP G T CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 DIS3 22894 CPCGene hg19 13 73355058 73355058 + Missense_Mutation SNP G T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 KLF12 11278 broad.mit.edu hg19 13 74269718 74269718 + Missense_Mutation SNP C A TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx TBC1D4 9882 CPCGene hg19 13 75923344 75923344 + Missense_Mutation SNP G C CPCG0265-F1 Unknown Somatic WXS Illumina HiSeq 2500 CLN5 1203 CPCGene hg19 13 77566207 77566207 + Missense_Mutation SNP G A CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 MYCBP2 23077 broad.mit.edu hg19 13 77642776 77642776 + Missense_Mutation SNP T A TCGA-G9-6354-01 Unknown Somatic WXS Illumina GAIIx SLITRK1 114798 broad.mit.edu hg19 13 84454122 84454122 + Missense_Mutation SNP C A PR-09-2517-Tumor Unknown Somatic WXS Illumina GAIIx SLITRK5 26050 broad.mit.edu hg19 13 88328403 88328403 + Missense_Mutation SNP T C TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx ABCC4 10257 CPCGene hg19 13 95715012 95715012 + Missense_Mutation SNP C G CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 ABCC4 10257 broad.mit.edu hg19 13 95862980 95862980 + Missense_Mutation SNP T C TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx ABCC4 10257 broad.mit.edu hg19 13 95899954 95899954 + Missense_Mutation SNP T G TCGA-HC-A6AO-01 Unknown Somatic WXS Illumina GAIIx UGGT2 55757 CPCGene hg19 13 96599352 96599352 + Missense_Mutation SNP C T CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 UGGT2 55757 broad.mit.edu hg19 13 96601606 96601606 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx OXGR1 27199 CPCGene hg19 13 97639830 97639830 + Missense_Mutation SNP T C CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 DOCK9 23348 CPCGene hg19 13 99481945 99481945 + Missense_Mutation SNP C G CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 DOCK9 23348 broad.mit.edu hg19 13 99502308 99502308 + Missense_Mutation SNP T C P05-3852 Unknown Somatic WGS Illumina GAIIx DOCK9 23348 CPCGene hg19 13 99515784 99515784 + Missense_Mutation SNP G C CPCG0241-F1 Unknown Somatic WXS Illumina HiSeq 2500 DOCK9 23348 broad.mit.edu hg19 13 99554071 99554071 + Missense_Mutation SNP A T P04-2641-Tumor Unknown Somatic WXS Illumina GAIIx CLYBL 171425 broad.mit.edu hg19 13 100518573 100518573 + Missense_Mutation SNP C A TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx ZIC5 85416 broad.mit.edu hg19 13 100617974 100617974 + Missense_Mutation SNP G C TCGA-EJ-7785-01 Unknown Somatic WXS Illumina GAIIx ZIC2 7546 broad.mit.edu hg19 13 100635173 100635173 + Missense_Mutation SNP A G TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx NALCN 259232 broad.mit.edu hg19 13 102047576 102047576 + Missense_Mutation SNP C T TCGA-EJ-5521-01 Unknown Somatic WXS Illumina GAIIx ITGBL1 9358 broad.mit.edu hg19 13 102105223 102105223 + Missense_Mutation SNP G A PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx ITGBL1 9358 CPCGene hg19 13 102106262 102106262 + Missense_Mutation SNP T C CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 ITGBL1 9358 CPCGene hg19 13 102359228 102359228 + Missense_Mutation SNP G A CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 FGF14 2259 CPCGene hg19 13 103054001 103054001 + Missense_Mutation SNP T A CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 FGF14 2259 CPCGene hg19 13 103054002 103054002 + Missense_Mutation SNP C G CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCDC168 643677 CPCGene hg19 13 103389948 103389948 + Missense_Mutation SNP G A CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCDC168 643677 CPCGene hg19 13 103394005 103394005 + Missense_Mutation SNP C A CPCG0213-F1 Unknown Somatic WXS Illumina HiSeq 2500 TEX30 93081 CPCGene hg19 13 103419770 103419770 + Missense_Mutation SNP A G CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 BIVM-ERCC5 100533467 broad.mit.edu hg19 13 103514990 103514990 + Missense_Mutation SNP A T TCGA-2A-A8VV-01 Unknown Somatic WXS Illumina GAIIx FAM155A 728215 broad.mit.edu hg19 13 107863055 107863055 + Missense_Mutation SNP A G TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx FAM155A 728215 broad.mit.edu hg19 13 108518263 108518263 + Missense_Mutation SNP A C PR-09-2744-Tumor Unknown Somatic WXS Illumina GAIIx COL4A2 1284 broad.mit.edu hg19 13 111102784 111102784 + Missense_Mutation SNP G A P07-684-Tumor Unknown Somatic WXS Illumina GAIIx CARS2 79587 CPCGene hg19 13 111319708 111319708 + Missense_Mutation SNP C T CPCG0199-F1 Unknown Somatic WXS Illumina HiSeq 2500 MCF2L 23263 broad.mit.edu hg19 13 113732744 113732744 + Missense_Mutation SNP G A TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx MCF2L 23263 broad.mit.edu hg19 13 113735569 113735569 + Missense_Mutation SNP G T TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx F7 2155 broad.mit.edu hg19 13 113771855 113771855 + Missense_Mutation SNP C T PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx F10 2159 broad.mit.edu hg19 13 113798308 113798308 + Missense_Mutation SNP G A TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx CUL4A 8451 broad.mit.edu hg19 13 113900339 113900339 + Missense_Mutation SNP C T P07-4941 Unknown Somatic WGS Illumina GAIIx LAMP1 3916 CPCGene hg19 13 113976731 113976731 + Missense_Mutation SNP A G CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 GAS6 2621 broad.mit.edu hg19 13 114535354 114535354 + Missense_Mutation SNP C T P09-1372-Tumor Unknown Somatic WXS Illumina GAIIx CDC16 8881 CPCGene hg19 13 115037904 115037904 + Missense_Mutation SNP G T CPCG0001-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCNB1IP1 57820 CPCGene hg19 14 20781884 20781884 + Missense_Mutation SNP T C CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 OR6S1 341799 broad.mit.edu hg19 14 21109305 21109305 + Missense_Mutation SNP G A TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx METTL17 64745 broad.mit.edu hg19 14 21462965 21462965 + Missense_Mutation SNP G A PR-3043 Unknown Somatic WGS Illumina GAIIx SLC39A2 29986 broad.mit.edu hg19 14 21469223 21469223 + Missense_Mutation SNP G A TCGA-HC-7075-01 Unknown Somatic WGS Illumina GAIIx TPPP2 122664 broad.mit.edu hg19 14 21498804 21498804 + Missense_Mutation SNP G A TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx ZNF219 51222 broad.mit.edu hg19 14 21560252 21560252 + Missense_Mutation SNP G A P07-5318 Unknown Somatic WGS Illumina GAIIx RPGRIP1 57096 broad.mit.edu hg19 14 21790127 21790127 + Missense_Mutation SNP G T TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx CHD8 57680 broad.mit.edu hg19 14 21873933 21873933 + Missense_Mutation SNP G A P07-5037 Unknown Somatic WGS Illumina GAIIx CHD8 57680 CPCGene hg19 14 21897395 21897395 + Missense_Mutation SNP C T CPCG0081-F1 Unknown Somatic WXS Illumina HiSeq 2500 CHD8 57680 broad.mit.edu hg19 14 21897454 21897454 + Missense_Mutation SNP T C P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx TOX4 9878 broad.mit.edu hg19 14 21955847 21955847 + Missense_Mutation SNP A G TCGA-Y6-A8TL-01 Unknown Somatic WXS Illumina GAIIx METTL3 56339 broad.mit.edu hg19 14 21969253 21969253 + Missense_Mutation SNP G A PR-05-3595 Unknown Somatic WGS Illumina GAIIx METTL3 56339 broad.mit.edu hg19 14 21971365 21971365 + Missense_Mutation SNP A C TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx ABHD4 63874 CPCGene hg19 14 23072419 23072419 + Missense_Mutation SNP C T CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 RBM23 55147 CPCGene hg19 14 23371193 23371193 + Missense_Mutation SNP C T CPCG0341-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRMT5 10419 CPCGene hg19 14 23395344 23395344 + Missense_Mutation SNP T C CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 CEBPE 1053 broad.mit.edu hg19 14 23587880 23587880 + Missense_Mutation SNP G A TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx BCL2L2 599 broad.mit.edu hg19 14 23777116 23777116 + Missense_Mutation SNP G A PR-09-3566-Tumor Unknown Somatic WXS Illumina GAIIx MYH6 4624 broad.mit.edu hg19 14 23857048 23857048 + Missense_Mutation SNP C G P03-1426 Unknown Somatic WGS Illumina GAIIx MYH6 4624 broad.mit.edu hg19 14 23858667 23858667 + Missense_Mutation SNP G A TCGA-M7-A721-01 Unknown Somatic WXS Illumina GAIIx MYH7 4625 broad.mit.edu hg19 14 23898176 23898176 + Missense_Mutation SNP G A PR-09-2744-Tumor Unknown Somatic WXS Illumina GAIIx MYH7 4625 broad.mit.edu hg19 14 23901077 23901077 + Missense_Mutation SNP C T TCGA-EJ-5512-01 Unknown Somatic WXS Illumina GAIIx ZFHX2 85446 CPCGene hg19 14 24003307 24003307 + Missense_Mutation SNP C T CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 THTPA 79178 broad.mit.edu hg19 14 24025980 24025980 + Missense_Mutation SNP T C PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx THTPA 79178 broad.mit.edu hg19 14 24026130 24026130 + Missense_Mutation SNP G A TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx AP1G2 8906 CPCGene hg19 14 24036380 24036380 + Missense_Mutation SNP G C CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 JPH4 84502 broad.mit.edu hg19 14 24040525 24040525 + Missense_Mutation SNP C T TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx LRRC16B 0 CPCGene hg19 14 24537833 24537833 + Missense_Mutation SNP C A CPCG0121-F1 Unknown Somatic WXS Illumina HiSeq 2500 CPNE6 9362 broad.mit.edu hg19 14 24546868 24546868 + Missense_Mutation SNP G C TCGA-HC-7075-01 Unknown Somatic WGS Illumina GAIIx PCK2 5106 CPCGene hg19 14 24572068 24572068 + Missense_Mutation SNP C T CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCK2 5106 broad.mit.edu hg19 14 24572967 24572967 + Missense_Mutation SNP A G TCGA-CH-5790-01 Unknown Somatic WXS Illumina GAIIx CHMP4A 29082 broad.mit.edu hg19 14 24682652 24682652 + Missense_Mutation SNP C G TCGA-G9-6365-01 Unknown Somatic WGS Illumina GAIIx GMPR2 51292 broad.mit.edu hg19 14 24702732 24702732 + Missense_Mutation SNP C A TCGA-G9-6354-01 Unknown Somatic WXS Illumina GAIIx ADCY4 196883 broad.mit.edu hg19 14 24789053 24789053 + Missense_Mutation SNP G A TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx ADCY4 196883 broad.mit.edu hg19 14 24791911 24791911 + Missense_Mutation SNP G A TCGA-VN-A88O-01 Unknown Somatic WXS Illumina GAIIx ADCY4 196883 CPCGene hg19 14 24793282 24793282 + Missense_Mutation SNP C T CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 NYNRIN 57523 CPCGene hg19 14 24886555 24886555 + Missense_Mutation SNP C A CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 SDR39U1 56948 CPCGene hg19 14 24911588 24911588 + Missense_Mutation SNP C T CPCG0412-F1 Unknown Somatic WXS Illumina HiSeq 2500 CMA1 1215 broad.mit.edu hg19 14 24976626 24976626 + Missense_Mutation SNP T C TCGA-EJ-5542-01 Unknown Somatic WXS Illumina GAIIx NOVA1 4857 broad.mit.edu hg19 14 26917506 26917506 + Missense_Mutation SNP T A TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx NOVA1 4857 CPCGene hg19 14 26918156 26918156 + Missense_Mutation SNP A G CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 FOXG1 2290 broad.mit.edu hg19 14 29237113 29237113 + Missense_Mutation SNP T C TCGA-G9-6498-01 Unknown Somatic WXS Illumina GAIIx HECTD1 25831 broad.mit.edu hg19 14 31597010 31597010 + Missense_Mutation SNP T C P07-837 Unknown Somatic WGS Illumina GAIIx AKAP6 9472 broad.mit.edu hg19 14 33292870 33292870 + Missense_Mutation SNP G A TCGA-XJ-A83G-01 Unknown Somatic WXS Illumina GAIIx NPAS3 64067 broad.mit.edu hg19 14 33684445 33684445 + Missense_Mutation SNP A T P04-2740-Tumor Unknown Somatic WXS Illumina GAIIx SRP54 6729 broad.mit.edu hg19 14 35470176 35470176 + Missense_Mutation SNP C G TCGA-HC-8261-01 Unknown Somatic WXS Illumina GAIIx FOXA1 3169 CPCGene hg19 14 38061208 38061208 + Missense_Mutation SNP G C CPCG0003-F1 Unknown Somatic WXS Illumina HiSeq 2500 FOXA1 3169 broad.mit.edu hg19 14 38061229 38061229 + Missense_Mutation SNP A C TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx FOXA1 3169 broad.mit.edu hg19 14 38061231 38061231 + Missense_Mutation SNP A C PR-0427-Tumor Unknown Somatic WXS Illumina GAIIx FOXA1 3169 CPCGene hg19 14 38061231 38061231 + Missense_Mutation SNP A G CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 FOXA1 3169 broad.mit.edu hg19 14 38061231 38061231 + Missense_Mutation SNP A T P05-620 Unknown Somatic WGS Illumina GAIIx FOXA1 3169 CPCGene hg19 14 38061250 38061250 + Missense_Mutation SNP G A CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 FOXA1 3169 broad.mit.edu hg19 14 38061294 38061294 + Missense_Mutation SNP G A PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx FOXA1 3169 broad.mit.edu hg19 14 38061313 38061313 + Missense_Mutation SNP C T PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx FOXA1 3169 broad.mit.edu hg19 14 38061317 38061317 + Missense_Mutation SNP G T P07-5318 Unknown Somatic WGS Illumina GAIIx FOXA1 3169 CPCGene hg19 14 38061340 38061340 + Missense_Mutation SNP A C CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 FOXA1 3169 CPCGene hg19 14 38061528 38061528 + Missense_Mutation SNP C T CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 SSTR1 6751 CPCGene hg19 14 38679000 38679000 + Missense_Mutation SNP G A CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 FSCB 84075 CPCGene hg19 14 44976055 44976055 + Missense_Mutation SNP A G CPCG0123-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAM179B 23116 broad.mit.edu hg19 14 45513935 45513935 + Missense_Mutation SNP C T PR-08-4154 Unknown Somatic WGS Illumina GAIIx FAM179B 23116 CPCGene hg19 14 45540956 45540956 + Missense_Mutation SNP T A CPCG0412-F1 Unknown Somatic WXS Illumina HiSeq 2500 MIS18BP1 55320 CPCGene hg19 14 45693260 45693260 + Missense_Mutation SNP G A CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 MIS18BP1 55320 broad.mit.edu hg19 14 45712026 45712026 + Missense_Mutation SNP G T PR-00-1823-Tumor Unknown Somatic WXS Illumina GAIIx NEMF 9147 broad.mit.edu hg19 14 50251653 50251653 + Missense_Mutation SNP C T TCGA-HC-8256-01 Unknown Somatic WXS Illumina GAIIx SOS2 6655 CPCGene hg19 14 50611951 50611951 + Missense_Mutation SNP G A CPCG0090-F1 Unknown Somatic WXS Illumina HiSeq 2500 GNG2 54331 broad.mit.edu hg19 14 52433402 52433402 + Missense_Mutation SNP T G P07-837 Unknown Somatic WGS Illumina GAIIx NID2 22795 broad.mit.edu hg19 14 52520476 52520476 + Missense_Mutation SNP T C TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx NID2 22795 broad.mit.edu hg19 14 52520915 52520915 + Missense_Mutation SNP G A TCGA-FC-7708-01 Unknown Somatic WXS Illumina GAIIx PTGDR 5729 broad.mit.edu hg19 14 52735165 52735165 + Missense_Mutation SNP C T TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx CDKN3 1033 EMBL hg19 14 54868256 54868256 + Missense_Mutation SNP G A EOPC-06 Unknown Somatic WGS Illumina HiSeq2000 SOCS4 122809 broad.mit.edu hg19 14 55509920 55509920 + Missense_Mutation SNP G T TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx ATG14 22863 broad.mit.edu hg19 14 55848836 55848836 + Missense_Mutation SNP G A TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx TBPL2 387332 broad.mit.edu hg19 14 55903530 55903530 + Missense_Mutation SNP G A TCGA-J4-A83L-01 Unknown Somatic WXS Illumina GAIIx KTN1 3895 broad.mit.edu hg19 14 56079014 56079014 + Missense_Mutation SNP A G TCGA-VP-A87C-01 Unknown Somatic WXS Illumina GAIIx OTX2 5015 broad.mit.edu hg19 14 57268617 57268617 + Missense_Mutation SNP C G TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx C14 0 broad.mit.edu hg19 14 57960385 57960385 + Missense_Mutation SNP G A P04-2740-Tumor Unknown Somatic WXS Illumina GAIIx PCNXL4 0 CPCGene hg19 14 60600862 60600862 + Missense_Mutation SNP C T CPCG0365-F1 Unknown Somatic WXS Illumina HiSeq 2500 DHRS7 51635 CPCGene hg19 14 60631976 60631976 + Missense_Mutation SNP G A CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 SYT16 83851 CPCGene hg19 14 62462900 62462900 + Missense_Mutation SNP C T CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 KCNH5 27133 broad.mit.edu hg19 14 63453899 63453899 + Missense_Mutation SNP G A TCGA-EJ-7783-01 Unknown Somatic WXS Illumina GAIIx SYNE2 23224 CPCGene hg19 14 64497882 64497882 + Missense_Mutation SNP A G CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 SYNE2 23224 broad.mit.edu hg19 14 64604565 64604565 + Missense_Mutation SNP A C TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx ESR2 2100 broad.mit.edu hg19 14 64701797 64701797 + Missense_Mutation SNP C T PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx SPTB 6710 broad.mit.edu hg19 14 65239589 65239589 + Missense_Mutation SNP G T TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx MPP5 64398 CPCGene hg19 14 67759337 67759337 + Missense_Mutation SNP C A CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 MPP5 64398 CPCGene hg19 14 67790517 67790517 + Missense_Mutation SNP C T CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 PLEKHH1 57475 broad.mit.edu hg19 14 68044086 68044086 + Missense_Mutation SNP C T P05-1657 Unknown Somatic WGS Illumina GAIIx ZFYVE26 23503 broad.mit.edu hg19 14 68272329 68272329 + Missense_Mutation SNP C T TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx ZFP36L1 677 broad.mit.edu hg19 14 69256720 69256720 + Missense_Mutation SNP G C TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx ACTN1 87 broad.mit.edu hg19 14 69346709 69346709 + Missense_Mutation SNP C A PR-09-5702-Tumor Unknown Somatic WXS Illumina GAIIx DCAF5 8816 CPCGene hg19 14 69521094 69521094 + Missense_Mutation SNP G C CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 SMOC1 64093 broad.mit.edu hg19 14 70477514 70477514 + Missense_Mutation SNP A G TCGA-G9-6498-01 Unknown Somatic WXS Illumina GAIIx ADAM21 8747 broad.mit.edu hg19 14 70924676 70924676 + Missense_Mutation SNP T C TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx MAP3K9 4293 broad.mit.edu hg19 14 71267477 71267477 + Missense_Mutation SNP C T TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx PCNX 0 broad.mit.edu hg19 14 71485847 71485847 + Missense_Mutation SNP G A TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx SIPA1L1 26037 broad.mit.edu hg19 14 72176071 72176071 + Missense_Mutation SNP G T P08-492 Unknown Somatic WGS Illumina GAIIx DPF3 8110 broad.mit.edu hg19 14 73137874 73137874 + Missense_Mutation SNP C T P07-5037 Unknown Somatic WGS Illumina GAIIx ZFYVE1 53349 broad.mit.edu hg19 14 73459968 73459968 + Missense_Mutation SNP C T TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx RBM25 58517 broad.mit.edu hg19 14 73581030 73581030 + Missense_Mutation SNP G A TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx PAPLN 89932 broad.mit.edu hg19 14 73719443 73719443 + Missense_Mutation SNP C T TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx PAPLN 89932 broad.mit.edu hg19 14 73719446 73719446 + Missense_Mutation SNP C T TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx PAPLN 89932 broad.mit.edu hg19 14 73731013 73731013 + Missense_Mutation SNP G A TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx HEATR4 399671 broad.mit.edu hg19 14 73945419 73945419 + Missense_Mutation SNP T C PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx HEATR4 399671 CPCGene hg19 14 73945487 73945487 + Missense_Mutation SNP G A CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAM161B 145483 broad.mit.edu hg19 14 74413257 74413257 + Missense_Mutation SNP C T PR-05-3595 Unknown Somatic WGS Illumina GAIIx COQ6 51004 broad.mit.edu hg19 14 74426130 74426130 + Missense_Mutation SNP T C TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx VSX2 338917 CPCGene hg19 14 74711917 74711917 + Missense_Mutation SNP G A CPCG0336-F1 Unknown Somatic WXS Illumina HiSeq 2500 VRTN 55237 broad.mit.edu hg19 14 74824067 74824067 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx VRTN 55237 CPCGene hg19 14 74825491 74825491 + Missense_Mutation SNP C A CPCG0124-F1 Unknown Somatic WXS Illumina HiSeq 2500 VRTN 55237 broad.mit.edu hg19 14 74825501 74825501 + Missense_Mutation SNP A T TCGA-HC-7820-01 Unknown Somatic WXS Illumina GAIIx TMED10 10972 broad.mit.edu hg19 14 75602590 75602590 + Splice_Site SNP C G TCGA-2A-A8VL-01 Unknown Somatic WXS Illumina GAIIx TTLL5 23093 CPCGene hg19 14 76184290 76184290 + Missense_Mutation SNP G T CPCG0047-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTLL5 23093 CPCGene hg19 14 76243095 76243095 + Missense_Mutation SNP A T CPCG0357-F1 Unknown Somatic WXS Illumina HiSeq 2500 IRF2BPL 64207 CPCGene hg19 14 77491901 77491901 + Missense_Mutation SNP C A CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 CIPC 85457 broad.mit.edu hg19 14 77579824 77579824 + Missense_Mutation SNP C G P04-1421-Tumor Unknown Somatic WXS Illumina GAIIx SNW1 22938 broad.mit.edu hg19 14 78205133 78205133 + Missense_Mutation SNP G A TCGA-HC-A6AP-01 Unknown Somatic WXS Illumina GAIIx NRXN3 9369 broad.mit.edu hg19 14 79434627 79434627 + Missense_Mutation SNP G A TCGA-J4-A67L-01 Unknown Somatic WXS Illumina GAIIx CEP128 145508 broad.mit.edu hg19 14 81251838 81251838 + Missense_Mutation SNP G A TCGA-G9-6363-01 Unknown Somatic WXS Illumina GAIIx TSHR 7253 broad.mit.edu hg19 14 81422160 81422160 + Missense_Mutation SNP C T TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx SEL1L 6400 broad.mit.edu hg19 14 81952706 81952706 + Missense_Mutation SNP C T PR-09-146 Unknown Somatic WGS Illumina GAIIx FLRT2 23768 CPCGene hg19 14 86089500 86089500 + Missense_Mutation SNP G A CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 KCNK10 54207 broad.mit.edu hg19 14 88658679 88658679 + Missense_Mutation SNP C T TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx PTPN21 11099 broad.mit.edu hg19 14 88983485 88983485 + Missense_Mutation SNP C T TCGA-EJ-5542-01 Unknown Somatic WXS Illumina GAIIx PTPN21 11099 broad.mit.edu hg19 14 88983560 88983560 + Missense_Mutation SNP G A PR-3035-Tumor Unknown Somatic WXS Illumina GAIIx FOXN3 1112 broad.mit.edu hg19 14 89878584 89878584 + Missense_Mutation SNP C T TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx TDP1 55775 broad.mit.edu hg19 14 90442141 90442141 + Missense_Mutation SNP C T TCGA-HC-8261-01 Unknown Somatic WXS Illumina GAIIx RPS6KA5 9252 CPCGene hg19 14 91356934 91356934 + Missense_Mutation SNP G T CPCG0001-F1 Unknown Somatic WXS Illumina HiSeq 2500 RPS6KA5 9252 broad.mit.edu hg19 14 91360831 91360831 + Missense_Mutation SNP T G TCGA-G9-6364-01 Unknown Somatic WXS Illumina GAIIx RPS6KA5 9252 CPCGene hg19 14 91366528 91366528 + Missense_Mutation SNP C T CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 C14 0 broad.mit.edu hg19 14 91655506 91655506 + Missense_Mutation SNP T G TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx ATXN3 4287 broad.mit.edu hg19 14 92548749 92548749 + Missense_Mutation SNP C A TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx SLC24A4 123041 broad.mit.edu hg19 14 92959966 92959966 + Missense_Mutation SNP C T PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx RIN3 79890 CPCGene hg19 14 93125540 93125540 + Missense_Mutation SNP C A CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 CHGA 1113 broad.mit.edu hg19 14 93397696 93397696 + Missense_Mutation SNP G A TCGA-EJ-5501-01 Unknown Somatic WXS Illumina GAIIx ITPK1 3705 broad.mit.edu hg19 14 93412807 93412807 + Missense_Mutation SNP G C TCGA-EJ-7792-01 Unknown Somatic WXS Illumina GAIIx MOAP1 64112 broad.mit.edu hg19 14 93649914 93649914 + Missense_Mutation SNP T C TCGA-EJ-7786-01 Unknown Somatic WXS Illumina GAIIx BTBD7 55727 CPCGene hg19 14 93717820 93717820 + Missense_Mutation SNP T C CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 UNC79 57578 broad.mit.edu hg19 14 93994973 93994973 + Missense_Mutation SNP T A TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx UNC79 57578 broad.mit.edu hg19 14 94004514 94004514 + Missense_Mutation SNP G A TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx UNC79 57578 broad.mit.edu hg19 14 94044282 94044282 + Missense_Mutation SNP G A PR-3051-Tumor Unknown Somatic WXS Illumina GAIIx ASB2 51676 CPCGene hg19 14 94401108 94401108 + Missense_Mutation SNP C A CPCG0262-F1 Unknown Somatic WXS Illumina HiSeq 2500 ASB2 51676 broad.mit.edu hg19 14 94401108 94401108 + Missense_Mutation SNP C T TCGA-CH-5738-01 Unknown Somatic WXS Illumina GAIIx ASB2 51676 broad.mit.edu hg19 14 94405679 94405679 + Missense_Mutation SNP G A PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx DDX24 57062 broad.mit.edu hg19 14 94526642 94526642 + Missense_Mutation SNP G C TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx SERPINA2 390502 broad.mit.edu hg19 14 94833013 94833013 + Missense_Mutation SNP C A TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx SERPINA12 145264 broad.mit.edu hg19 14 94953828 94953828 + Missense_Mutation SNP C G P05-3852 Unknown Somatic WGS Illumina GAIIx SYNE3 161176 broad.mit.edu hg19 14 95899740 95899740 + Missense_Mutation SNP C A PR-09-5700-Tumor Unknown Somatic WXS Illumina GAIIx BDKRB1 623 broad.mit.edu hg19 14 96730362 96730362 + Missense_Mutation SNP G C TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx AK7 122481 CPCGene hg19 14 96937897 96937897 + Missense_Mutation SNP G T CPCG0336-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCDC85C 317762 CPCGene hg19 14 100070262 100070262 + Missense_Mutation SNP G A CPCG0191-F1 Unknown Somatic WXS Illumina HiSeq 2500 EML1 2009 broad.mit.edu hg19 14 100405575 100405575 + Missense_Mutation SNP G A TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx SLC25A29 123096 CPCGene hg19 14 100758635 100758635 + Missense_Mutation SNP C G CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 RTL1 388015 CPCGene hg19 14 101348812 101348812 + Missense_Mutation SNP G A CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 RTL1 388015 broad.mit.edu hg19 14 101349274 101349274 + Missense_Mutation SNP G A TCGA-HC-7075-01 Unknown Somatic WGS Illumina GAIIx RTL1 388015 broad.mit.edu hg19 14 101349285 101349285 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx DYNC1H1 1778 broad.mit.edu hg19 14 102515892 102515892 + Missense_Mutation SNP T C PR-3035-Tumor Unknown Somatic WXS Illumina GAIIx WDR20 91833 broad.mit.edu hg19 14 102675357 102675357 + Missense_Mutation SNP G A PR-01-2492-Tumor Unknown Somatic WXS Illumina GAIIx AMN 81693 CPCGene hg19 14 103395262 103395262 + Missense_Mutation SNP G A CPCG0124-F1 Unknown Somatic WXS Illumina HiSeq 2500 BAG5 9529 broad.mit.edu hg19 14 104026230 104026230 + Missense_Mutation SNP C G PR-0427-Tumor Unknown Somatic WXS Illumina GAIIx TDRD9 122402 CPCGene hg19 14 104471611 104471611 + Missense_Mutation SNP C T CPCG0358-F1 Unknown Somatic WXS Illumina HiSeq 2500 AKT1 207 broad.mit.edu hg19 14 105246551 105246551 + Missense_Mutation SNP C T TCGA-EJ-5530-01 Unknown Somatic WXS Illumina GAIIx CEP170B 283638 broad.mit.edu hg19 14 105349541 105349541 + Missense_Mutation SNP G A TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx CEP170B 283638 broad.mit.edu hg19 14 105353393 105353393 + Missense_Mutation SNP G A P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx CEP170B 283638 broad.mit.edu hg19 14 105353658 105353658 + Missense_Mutation SNP C T PR-09-5700-Tumor Unknown Somatic WXS Illumina GAIIx AHNAK2 113146 broad.mit.edu hg19 14 105408253 105408253 + Missense_Mutation SNP C T TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx AHNAK2 113146 broad.mit.edu hg19 14 105411091 105411091 + Missense_Mutation SNP G A TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx AHNAK2 113146 broad.mit.edu hg19 14 105411182 105411182 + Missense_Mutation SNP G T PR-3051-Tumor Unknown Somatic WXS Illumina GAIIx AHNAK2 113146 CPCGene hg19 14 105412066 105412066 + Missense_Mutation SNP C T CPCG0354-F1 Unknown Somatic WXS Illumina HiSeq 2500 AHNAK2 113146 CPCGene hg19 14 105412574 105412574 + Missense_Mutation SNP G A CPCG0001-F1 Unknown Somatic WXS Illumina HiSeq 2500 AHNAK2 113146 broad.mit.edu hg19 14 105419464 105419464 + Missense_Mutation SNP C T TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx AHNAK2 113146 broad.mit.edu hg19 14 105421875 105421875 + Missense_Mutation SNP G A TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx JAG2 3714 broad.mit.edu hg19 14 105622204 105622204 + Missense_Mutation SNP C T TCGA-EJ-5504-01 Unknown Somatic WXS Illumina GAIIx TEX22 647310 CPCGene hg19 14 105877792 105877792 + Missense_Mutation SNP C G CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 CYFIP1 23191 broad.mit.edu hg19 15 22945111 22945111 + Missense_Mutation SNP G A TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx NIPA2 81614 broad.mit.edu hg19 15 23014493 23014493 + Missense_Mutation SNP C A PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx MAGEL2 54551 broad.mit.edu hg19 15 23889701 23889701 + Missense_Mutation SNP G A PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx NPAP1 23742 broad.mit.edu hg19 15 24923472 24923472 + Missense_Mutation SNP A T TCGA-HC-8259-01 Unknown Somatic WXS Illumina GAIIx OCA2 4948 broad.mit.edu hg19 15 28096604 28096604 + Missense_Mutation SNP G T PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx HERC2 8924 broad.mit.edu hg19 15 28386775 28386775 + Missense_Mutation SNP G A TCGA-G9-6348-01 Unknown Somatic WXS Illumina GAIIx HERC2 8924 CPCGene hg19 15 28474627 28474627 + Missense_Mutation SNP A G CPCG0246-F1 Unknown Somatic WXS Illumina HiSeq 2500 RYR3 6263 broad.mit.edu hg19 15 33855189 33855189 + Missense_Mutation SNP G A TCGA-VN-A88N-01 Unknown Somatic WXS Illumina GAIIx RYR3 6263 broad.mit.edu hg19 15 33988496 33988496 + Missense_Mutation SNP C T TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx RYR3 6263 broad.mit.edu hg19 15 34015067 34015067 + Missense_Mutation SNP C T TCGA-QU-A6IP-01 Unknown Somatic WXS Illumina GAIIx RYR3 6263 CPCGene hg19 15 34065797 34065797 + Missense_Mutation SNP A C CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 RYR3 6263 CPCGene hg19 15 34078039 34078039 + Missense_Mutation SNP G C CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 RYR3 6263 broad.mit.edu hg19 15 34129958 34129958 + Missense_Mutation SNP A G TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx KATNBL1 79768 broad.mit.edu hg19 15 34445246 34445246 + Missense_Mutation SNP G C P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx NUTM1 256646 broad.mit.edu hg19 15 34648411 34648411 + Missense_Mutation SNP C A TCGA-EJ-7797-01 Unknown Somatic WXS Illumina GAIIx NUTM1 256646 broad.mit.edu hg19 15 34649647 34649647 + Missense_Mutation SNP C T TCGA-EJ-5530-01 Unknown Somatic WXS Illumina GAIIx ACTC1 70 broad.mit.edu hg19 15 35085746 35085746 + Missense_Mutation SNP T G TCGA-HC-7745-01 Unknown Somatic WXS Illumina GAIIx AQR 9716 broad.mit.edu hg19 15 35210531 35210531 + Missense_Mutation SNP T C TCGA-J4-A67L-01 Unknown Somatic WXS Illumina GAIIx FAM98B 283742 CPCGene hg19 15 38756331 38756331 + Missense_Mutation SNP C G CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPR176 11245 CPCGene hg19 15 40093396 40093396 + Missense_Mutation SNP G A CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPR176 11245 CPCGene hg19 15 40093423 40093423 + Missense_Mutation SNP C T CPCG0346-F1 Unknown Somatic WXS Illumina HiSeq 2500 C15 0 CPCGene hg19 15 40627532 40627532 + Missense_Mutation SNP G C CPCG0057-F1 Unknown Somatic WXS Illumina HiSeq 2500 C15 0 CPCGene hg19 15 40633121 40633121 + Missense_Mutation SNP T A CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 BAHD1 22893 broad.mit.edu hg19 15 40751640 40751640 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx CHST14 113189 broad.mit.edu hg19 15 40764050 40764050 + Missense_Mutation SNP G T PR-3036-Tumor Unknown Somatic WXS Illumina GAIIx C15 0 CPCGene hg19 15 40849496 40849496 + Missense_Mutation SNP G C CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 CASC5 0 CPCGene hg19 15 40916491 40916491 + Missense_Mutation SNP T G CPCG0339-F1 Unknown Somatic WXS Illumina HiSeq 2500 RMDN3 55177 broad.mit.edu hg19 15 41029496 41029496 + Missense_Mutation SNP T C PR-04-639-Tumor Unknown Somatic WXS Illumina GAIIx INO80 54617 broad.mit.edu hg19 15 41272519 41272519 + Missense_Mutation SNP G T TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx INO80 54617 broad.mit.edu hg19 15 41384239 41384239 + Missense_Mutation SNP T G TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx CHP1 11261 broad.mit.edu hg19 15 41523608 41523608 + Missense_Mutation SNP C T TCGA-EJ-5527-01 Unknown Somatic WXS Illumina GAIIx ITPKA 3706 CPCGene hg19 15 41786324 41786324 + Missense_Mutation SNP C T CPCG0354-F1 Unknown Somatic WXS Illumina HiSeq 2500 ITPKA 3706 CPCGene hg19 15 41786520 41786520 + Missense_Mutation SNP C A CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 RPAP1 26015 CPCGene hg19 15 41810208 41810208 + Missense_Mutation SNP C A CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 RPAP1 26015 broad.mit.edu hg19 15 41810251 41810251 + Missense_Mutation SNP C A P09-37 Unknown Somatic WGS Illumina GAIIx SPTBN5 51332 broad.mit.edu hg19 15 42162706 42162706 + Missense_Mutation SNP G A TCGA-EJ-7785-01 Unknown Somatic WXS Illumina GAIIx ZNF106 64397 broad.mit.edu hg19 15 42742890 42742890 + Missense_Mutation SNP G A TCGA-HC-A6AQ-01 Unknown Somatic WXS Illumina GAIIx STARD9 57519 CPCGene hg19 15 42974618 42974618 + Missense_Mutation SNP G A CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 UBR1 197131 broad.mit.edu hg19 15 43351987 43351987 + Missense_Mutation SNP C T PR-09-5446-Tumor Unknown Somatic WXS Illumina GAIIx LCMT2 9836 broad.mit.edu hg19 15 43620821 43620821 + Missense_Mutation SNP A G TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx LCMT2 9836 CPCGene hg19 15 43620828 43620828 + Missense_Mutation SNP A T CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 TP53BP1 7158 CPCGene hg19 15 43720235 43720235 + Missense_Mutation SNP T G CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 TP53BP1 7158 CPCGene hg19 15 43720275 43720275 + Missense_Mutation SNP G A CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAP1A 4130 broad.mit.edu hg19 15 43815432 43815432 + Missense_Mutation SNP A G TCGA-EJ-7330-01 Unknown Somatic WXS Illumina GAIIx HYPK 25764 broad.mit.edu hg19 15 44094002 44094002 + Missense_Mutation SNP T G TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx DUOXA2 405753 broad.mit.edu hg19 15 45409435 45409435 + Missense_Mutation SNP C T P06-1125-Tumor Unknown Somatic WXS Illumina GAIIx SPATA5L1 79029 CPCGene hg19 15 45709465 45709465 + Splice_Site SNP A G CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 MYEF2 50804 CPCGene hg19 15 48470312 48470312 + Missense_Mutation SNP C T CPCG0267-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC12A1 6557 broad.mit.edu hg19 15 48580269 48580269 + Missense_Mutation SNP C T TCGA-EJ-5521-01 Unknown Somatic WXS Illumina GAIIx FBN1 2200 broad.mit.edu hg19 15 48707834 48707834 + Missense_Mutation SNP A G TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx FBN1 2200 broad.mit.edu hg19 15 48713823 48713823 + Missense_Mutation SNP G A TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx FBN1 2200 broad.mit.edu hg19 15 48736776 48736776 + Missense_Mutation SNP C A TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx FBN1 2200 broad.mit.edu hg19 15 48777609 48777609 + Missense_Mutation SNP G A TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx FBN1 2200 broad.mit.edu hg19 15 48788323 48788323 + Missense_Mutation SNP T C TCGA-EJ-5542-01 Unknown Somatic WXS Illumina GAIIx CEP152 22995 CPCGene hg19 15 49036455 49036455 + Missense_Mutation SNP C T CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 SECISBP2L 9728 broad.mit.edu hg19 15 49329843 49329843 + Missense_Mutation SNP T A TCGA-EJ-5522-01 Unknown Somatic WXS Illumina GAIIx ATP8B4 79895 broad.mit.edu hg19 15 50168708 50168708 + Missense_Mutation SNP G T TCGA-QU-A6IO-01 Unknown Somatic WXS Illumina GAIIx USP8 9101 broad.mit.edu hg19 15 50788105 50788105 + Missense_Mutation SNP G T TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx USP8 9101 broad.mit.edu hg19 15 50790907 50790907 + Missense_Mutation SNP T C TCGA-HC-8261-01 Unknown Somatic WXS Illumina GAIIx CYP19A1 1588 broad.mit.edu hg19 15 51507272 51507272 + Missense_Mutation SNP A G TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx CYP19A1 1588 broad.mit.edu hg19 15 51507372 51507372 + Missense_Mutation SNP C T TCGA-EJ-7785-01 Unknown Somatic WXS Illumina GAIIx GLDN 342035 broad.mit.edu hg19 15 51675995 51675995 + Missense_Mutation SNP C T PR-09-146 Unknown Somatic WGS Illumina GAIIx GLDN 342035 broad.mit.edu hg19 15 51676022 51676022 + Missense_Mutation SNP G A TCGA-G9-6378-01 Unknown Somatic WXS Illumina GAIIx DMXL2 23312 broad.mit.edu hg19 15 51750746 51750746 + Missense_Mutation SNP A G P08-716 Unknown Somatic WGS Illumina GAIIx DMXL2 23312 CPCGene hg19 15 51768855 51768855 + Missense_Mutation SNP G A CPCG0413-F1 Unknown Somatic WXS Illumina HiSeq 2500 DMXL2 23312 CPCGene hg19 15 51778360 51778360 + Missense_Mutation SNP G A CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 MYO5C 55930 broad.mit.edu hg19 15 52517303 52517303 + Missense_Mutation SNP C T P00-000450-Tumor Unknown Somatic WXS Illumina GAIIx MYO5C 55930 CPCGene hg19 15 52521377 52521377 + Missense_Mutation SNP A G CPCG0191-F1 Unknown Somatic WXS Illumina HiSeq 2500 MYO5C 55930 broad.mit.edu hg19 15 52571125 52571125 + Missense_Mutation SNP C A PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx FAM214A 56204 broad.mit.edu hg19 15 52901525 52901525 + Missense_Mutation SNP T G TCGA-G9-6333-01 Unknown Somatic WXS Illumina GAIIx ONECUT1 3175 broad.mit.edu hg19 15 53081026 53081026 + Missense_Mutation SNP C A TCGA-EJ-5504-01 Unknown Somatic WXS Illumina GAIIx WDR72 256764 broad.mit.edu hg19 15 53992051 53992051 + Missense_Mutation SNP C T TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx UNC13C 440279 broad.mit.edu hg19 15 54307320 54307320 + Missense_Mutation SNP T A PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx UNC13C 440279 broad.mit.edu hg19 15 54308028 54308028 + Missense_Mutation SNP T G PR-07-4610 Unknown Somatic WGS Illumina GAIIx UNC13C 440279 broad.mit.edu hg19 15 54542505 54542505 + Missense_Mutation SNP C T PR-08-784 Unknown Somatic WGS Illumina GAIIx UNC13C 440279 broad.mit.edu hg19 15 54847665 54847665 + Missense_Mutation SNP G A TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx UNC13C 440279 broad.mit.edu hg19 15 54914528 54914528 + Missense_Mutation SNP G A P05-620 Unknown Somatic WGS Illumina GAIIx UNC13C 440279 CPCGene hg19 15 54919169 54919169 + Missense_Mutation SNP G T CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCPG1 9236 broad.mit.edu hg19 15 55657486 55657486 + Missense_Mutation SNP C T PR-07-4610 Unknown Somatic WGS Illumina GAIIx PRTG 283659 broad.mit.edu hg19 15 55964737 55964737 + Missense_Mutation SNP C T TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx NEDD4 4734 broad.mit.edu hg19 15 56126282 56126282 + Missense_Mutation SNP T C TCGA-YL-A8HO-01 Unknown Somatic WXS Illumina GAIIx TEX9 374618 broad.mit.edu hg19 15 56657675 56657675 + Missense_Mutation SNP G C TCGA-J4-A67N-01 Unknown Somatic WXS Illumina GAIIx TCF12 6938 broad.mit.edu hg19 15 57484403 57484403 + Missense_Mutation SNP A G TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx SLTM 79811 CPCGene hg19 15 59180690 59180690 + Missense_Mutation SNP G A CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 MYO1E 4643 CPCGene hg19 15 59470597 59470597 + Missense_Mutation SNP C T CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 RORA 6095 broad.mit.edu hg19 15 60919520 60919520 + Missense_Mutation SNP C T TCGA-HC-A6AO-01 Unknown Somatic WXS Illumina GAIIx TLN2 83660 broad.mit.edu hg19 15 62978869 62978869 + Missense_Mutation SNP G T TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx TLN2 83660 broad.mit.edu hg19 15 63055788 63055788 + Missense_Mutation SNP G T TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx HERC1 8925 CPCGene hg19 15 63987093 63987093 + Missense_Mutation SNP C G CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 HERC1 8925 broad.mit.edu hg19 15 64015556 64015556 + Splice_Site SNP T G P08-5852 Unknown Somatic WGS Illumina GAIIx HERC1 8925 broad.mit.edu hg19 15 64047508 64047508 + Missense_Mutation SNP G C TCGA-HC-A6AP-01 Unknown Somatic WXS Illumina GAIIx HERC1 8925 broad.mit.edu hg19 15 64047509 64047509 + Missense_Mutation SNP A G TCGA-HC-A6AP-01 Unknown Somatic WXS Illumina GAIIx DAPK2 23604 CPCGene hg19 15 64218244 64218244 + Missense_Mutation SNP C T CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 IGDCC3 9543 broad.mit.edu hg19 15 65667629 65667629 + Missense_Mutation SNP C T TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx IGDCC4 57722 broad.mit.edu hg19 15 65685846 65685846 + Missense_Mutation SNP G A TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx IGDCC4 57722 broad.mit.edu hg19 15 65687537 65687537 + Missense_Mutation SNP G A TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx IGDCC4 57722 broad.mit.edu hg19 15 65703589 65703589 + Missense_Mutation SNP C T P04-1084 Unknown Somatic WGS Illumina GAIIx VWA9 0 broad.mit.edu hg19 15 65892125 65892125 + Missense_Mutation SNP G A P08-217 Unknown Somatic WGS Illumina GAIIx SLC24A1 9187 broad.mit.edu hg19 15 65917480 65917480 + Missense_Mutation SNP A G TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx SMAD3 4088 broad.mit.edu hg19 15 67457295 67457295 + Missense_Mutation SNP G A PR-08-4154 Unknown Somatic WGS Illumina GAIIx IQCH 64799 CPCGene hg19 15 67664869 67664869 + Missense_Mutation SNP T A CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 SKOR1 390598 CPCGene hg19 15 68118949 68118949 + Missense_Mutation SNP C T CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 CLN6 54982 CPCGene hg19 15 68503654 68503654 + Missense_Mutation SNP G A CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 GLCE 26035 CPCGene hg19 15 69548171 69548171 + Missense_Mutation SNP A G CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 GLCE 26035 CPCGene hg19 15 69548328 69548328 + Missense_Mutation SNP T C CPCG0358-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIF23 9493 CPCGene hg19 15 69714441 69714441 + Missense_Mutation SNP A G CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 TLE3 7090 broad.mit.edu hg19 15 70349872 70349872 + Missense_Mutation SNP G C P05-3852 Unknown Somatic WGS Illumina GAIIx TLE3 7090 broad.mit.edu hg19 15 70352903 70352903 + Missense_Mutation SNP C T PR-04-3347-Tumor Unknown Somatic WXS Illumina GAIIx UACA 55075 broad.mit.edu hg19 15 70959376 70959376 + Missense_Mutation SNP T C TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx THSD4 79875 broad.mit.edu hg19 15 71952952 71952952 + Missense_Mutation SNP G T TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx MYO9A 4649 CPCGene hg19 15 72190006 72190006 + Missense_Mutation SNP T A CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 MYO9A 4649 broad.mit.edu hg19 15 72191038 72191038 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx MYO9A 4649 broad.mit.edu hg19 15 72193592 72193592 + Missense_Mutation SNP G T TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx PARP6 56965 CPCGene hg19 15 72533830 72533830 + Missense_Mutation SNP A G CPCG0047-F1 Unknown Somatic WXS Illumina HiSeq 2500 CELF6 60677 broad.mit.edu hg19 15 72581722 72581722 + Missense_Mutation SNP C T TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx BBS4 585 broad.mit.edu hg19 15 73029884 73029884 + Missense_Mutation SNP G C P05-3436-Tumor Unknown Somatic WXS Illumina GAIIx ADPGK 83440 broad.mit.edu hg19 15 73045050 73045050 + Missense_Mutation SNP G A TCGA-EJ-7123-01 Unknown Somatic WXS Illumina GAIIx NEO1 4756 broad.mit.edu hg19 15 73408893 73408893 + Missense_Mutation SNP G A P03-871-Tumor Unknown Somatic WXS Illumina GAIIx HCN4 10021 broad.mit.edu hg19 15 73615456 73615456 + Missense_Mutation SNP G T TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx HCN4 10021 broad.mit.edu hg19 15 73616276 73616276 + Missense_Mutation SNP T G PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx HCN4 10021 broad.mit.edu hg19 15 73622050 73622050 + Missense_Mutation SNP G A TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx ISLR 3671 broad.mit.edu hg19 15 74467265 74467265 + Missense_Mutation SNP C T TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx STRA6 64220 broad.mit.edu hg19 15 74472523 74472523 + Missense_Mutation SNP G A TCGA-XJ-A83G-01 Unknown Somatic WXS Illumina GAIIx CCDC33 80125 CPCGene hg19 15 74573124 74573124 + Missense_Mutation SNP G A CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 SEMA7A 8482 broad.mit.edu hg19 15 74703021 74703021 + Missense_Mutation SNP C T TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx SEMA7A 8482 EMBL hg19 15 74711232 74711232 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 ARID3B 10620 broad.mit.edu hg19 15 74883577 74883577 + Missense_Mutation SNP C T PR-00-1823-Tumor Unknown Somatic WXS Illumina GAIIx CYP1A2 1544 broad.mit.edu hg19 15 75044488 75044488 + Missense_Mutation SNP C T TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx ULK3 25989 broad.mit.edu hg19 15 75134439 75134439 + Missense_Mutation SNP G A TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx PTPN9 5780 CPCGene hg19 15 75798135 75798135 + Missense_Mutation SNP G A CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 CSPG4 1464 CPCGene hg19 15 75969649 75969649 + Missense_Mutation SNP A T CPCG0324-F1 Unknown Somatic WXS Illumina HiSeq 2500 TBC1D2B 23102 CPCGene hg19 15 78317653 78317653 + Missense_Mutation SNP T G CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 ACSBG1 23205 broad.mit.edu hg19 15 78466000 78466000 + Missense_Mutation SNP C A TCGA-VN-A88O-01 Unknown Somatic WXS Illumina GAIIx ACSBG1 23205 broad.mit.edu hg19 15 78473256 78473256 + Missense_Mutation SNP C T TCGA-XJ-A83G-01 Unknown Somatic WXS Illumina GAIIx ACSBG1 23205 broad.mit.edu hg19 15 78526759 78526759 + Missense_Mutation SNP G A PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx ADAMTS7 11173 CPCGene hg19 15 79063973 79063973 + Missense_Mutation SNP T C CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMED3 23423 CPCGene hg19 15 79606218 79606218 + Missense_Mutation SNP C T CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIAA1024 23251 CPCGene hg19 15 79749361 79749361 + Missense_Mutation SNP G A CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIAA1024 23251 CPCGene hg19 15 79749828 79749828 + Missense_Mutation SNP G C CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARNT2 9915 broad.mit.edu hg19 15 80806707 80806707 + Missense_Mutation SNP G C TCGA-J4-A83K-01 Unknown Somatic WXS Illumina GAIIx ARNT2 9915 broad.mit.edu hg19 15 80866543 80866543 + Missense_Mutation SNP A T TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx CEMIP 57214 broad.mit.edu hg19 15 81173253 81173253 + Missense_Mutation SNP T A P08-492 Unknown Somatic WGS Illumina GAIIx CEMIP 57214 broad.mit.edu hg19 15 81224300 81224300 + Missense_Mutation SNP G A TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx IL16 3603 CPCGene hg19 15 81578048 81578048 + Missense_Mutation SNP C T CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 CPEB1 64506 CPCGene hg19 15 83221304 83221304 + Missense_Mutation SNP G A CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 AP3B2 8120 CPCGene hg19 15 83357943 83357943 + Missense_Mutation SNP C T CPCG0114-F1 Unknown Somatic WXS Illumina HiSeq 2500 BTBD1 53339 broad.mit.edu hg19 15 83710528 83710528 + Missense_Mutation SNP G A TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx TM6SF1 53346 broad.mit.edu hg19 15 83795547 83795547 + Missense_Mutation SNP C A PR-3043 Unknown Somatic WGS Illumina GAIIx BNC1 646 broad.mit.edu hg19 15 83932793 83932793 + Missense_Mutation SNP G A PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx ADAMTSL3 57188 CPCGene hg19 15 84561585 84561585 + Missense_Mutation SNP T C CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 AGBL1 123624 broad.mit.edu hg19 15 86838596 86838596 + Missense_Mutation SNP G A TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx ACAN 176 broad.mit.edu hg19 15 89383254 89383254 + Missense_Mutation SNP C T TCGA-EJ-7783-01 Unknown Somatic WXS Illumina GAIIx ACAN 176 broad.mit.edu hg19 15 89395087 89395087 + Missense_Mutation SNP G A PR-2621 Unknown Somatic WGS Illumina GAIIx ACAN 176 broad.mit.edu hg19 15 89402162 89402162 + Missense_Mutation SNP G A TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx HAPLN3 145864 broad.mit.edu hg19 15 89424631 89424631 + Missense_Mutation SNP G A TCGA-EJ-7330-01 Unknown Somatic WXS Illumina GAIIx RLBP1 6017 broad.mit.edu hg19 15 89760395 89760395 + Missense_Mutation SNP C T TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx POLG 5428 CPCGene hg19 15 89876921 89876921 + Missense_Mutation SNP G A CPCG0210-F1 Unknown Somatic WXS Illumina HiSeq 2500 TICRR 90381 CPCGene hg19 15 90137718 90137718 + Missense_Mutation SNP C T CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 TICRR 90381 CPCGene hg19 15 90144562 90144562 + Missense_Mutation SNP G T CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 MESP2 145873 CPCGene hg19 15 90320142 90320142 + Missense_Mutation SNP G C CPCG0344-F1 Unknown Somatic WXS Illumina HiSeq 2500 MESP2 145873 CPCGene hg19 15 90320144 90320144 + Missense_Mutation SNP C G CPCG0344-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARPIN 348110 broad.mit.edu hg19 15 90447061 90447061 + Missense_Mutation SNP G A TCGA-HC-7212-01 Unknown Somatic WXS Illumina GAIIx CIB1 10519 broad.mit.edu hg19 15 90774720 90774720 + Missense_Mutation SNP C T TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx ZNF774 342132 broad.mit.edu hg19 15 90904247 90904247 + Missense_Mutation SNP G A TCGA-J4-A67S-01 Unknown Somatic WXS Illumina GAIIx IQGAP1 8826 EMBL hg19 15 90976989 90976989 + Missense_Mutation SNP G T EOPC-02 Unknown Somatic WGS Illumina HiSeq2000 IQGAP1 8826 broad.mit.edu hg19 15 91027480 91027480 + Missense_Mutation SNP C G TCGA-G9-6364-01 Unknown Somatic WXS Illumina GAIIx FURIN 5045 broad.mit.edu hg19 15 91423159 91423159 + Missense_Mutation SNP T G P05-3852 Unknown Somatic WGS Illumina GAIIx FES 2242 broad.mit.edu hg19 15 91428783 91428783 + Missense_Mutation SNP C A TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx MAN2A2 4122 broad.mit.edu hg19 15 91450694 91450694 + Missense_Mutation SNP C T TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx FAM174B 400451 broad.mit.edu hg19 15 93173520 93173520 + Missense_Mutation SNP C G TCGA-HC-7820-01 Unknown Somatic WXS Illumina GAIIx CHD2 1106 CPCGene hg19 15 93528790 93528790 + Missense_Mutation SNP T G CPCG0078-F1 Unknown Somatic WXS Illumina HiSeq 2500 CHD2 1106 broad.mit.edu hg19 15 93540221 93540221 + Missense_Mutation SNP C G P07-5318 Unknown Somatic WGS Illumina GAIIx ARRDC4 91947 CPCGene hg19 15 98512468 98512468 + Missense_Mutation SNP T C CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 IGF1R 3480 CPCGene hg19 15 99465651 99465651 + Missense_Mutation SNP A C CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 IGF1R 3480 broad.mit.edu hg19 15 99467806 99467806 + Missense_Mutation SNP A C TCGA-YL-A8HO-01 Unknown Somatic WXS Illumina GAIIx IGF1R 3480 broad.mit.edu hg19 15 99472820 99472820 + Missense_Mutation SNP C G PR-2761-Tumor Unknown Somatic WXS Illumina GAIIx SYNM 23336 CPCGene hg19 15 99646010 99646010 + Missense_Mutation SNP A C CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAMTS17 170691 broad.mit.edu hg19 15 100591784 100591784 + Missense_Mutation SNP G A PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx ALDH1A3 220 broad.mit.edu hg19 15 101425511 101425511 + Missense_Mutation SNP A G TCGA-EJ-5530-01 Unknown Somatic WXS Illumina GAIIx SNRNP25 79622 CPCGene hg19 16 107094 107094 + Missense_Mutation SNP T A CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 ITFG3 0 broad.mit.edu hg19 16 314964 314964 + Missense_Mutation SNP C T TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx AXIN1 8312 broad.mit.edu hg19 16 354425 354425 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx RAB11FIP3 9727 broad.mit.edu hg19 16 538850 538850 + Splice_Site SNP G A PR-08-556 Unknown Somatic WGS Illumina GAIIx RAB11FIP3 9727 broad.mit.edu hg19 16 570797 570797 + Missense_Mutation SNP G A TCGA-J4-A67Q-01 Unknown Somatic WXS Illumina GAIIx WDR90 197335 CPCGene hg19 16 703389 703389 + Missense_Mutation SNP G A CPCG0269-F1 Unknown Somatic WXS Illumina HiSeq 2500 WDR90 197335 CPCGene hg19 16 706449 706449 + Missense_Mutation SNP C A CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 WDR90 197335 broad.mit.edu hg19 16 716470 716470 + Missense_Mutation SNP G T P05-3859-Tumor Unknown Somatic WXS Illumina GAIIx METRN 79006 broad.mit.edu hg19 16 767073 767073 + Missense_Mutation SNP A G TCGA-J4-A67L-01 Unknown Somatic WXS Illumina GAIIx C1QTNF8 390664 broad.mit.edu hg19 16 1144753 1144753 + Missense_Mutation SNP G A PR-05-3595 Unknown Somatic WGS Illumina GAIIx CACNA1H 8912 broad.mit.edu hg19 16 1248741 1248741 + Missense_Mutation SNP G T PR-09-5702-Tumor Unknown Somatic WXS Illumina GAIIx CACNA1H 8912 broad.mit.edu hg19 16 1265557 1265557 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx TELO2 9894 broad.mit.edu hg19 16 1556991 1556991 + Missense_Mutation SNP T C TCGA-VP-A87C-01 Unknown Somatic WXS Illumina GAIIx CRAMP1L 0 broad.mit.edu hg19 16 1709961 1709961 + Missense_Mutation SNP G A TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx CRAMP1L 0 broad.mit.edu hg19 16 1709962 1709962 + Missense_Mutation SNP A G TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx SPSB3 90864 broad.mit.edu hg19 16 1827854 1827854 + Missense_Mutation SNP G A PR-04-1243 Unknown Somatic WGS Illumina GAIIx NDUFB10 4716 broad.mit.edu hg19 16 2011248 2011248 + Missense_Mutation SNP C G TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx TSC2 7249 broad.mit.edu hg19 16 2126130 2126130 + Missense_Mutation SNP C T TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx TSC2 7249 broad.mit.edu hg19 16 2136208 2136208 + Missense_Mutation SNP C A PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx PKD1 5310 broad.mit.edu hg19 16 2161134 2161134 + Missense_Mutation SNP A C TCGA-J4-A67K-01 Unknown Somatic WXS Illumina GAIIx ABCA3 21 CPCGene hg19 16 2336727 2336727 + Missense_Mutation SNP G A CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCNF 899 CPCGene hg19 16 2505441 2505441 + Missense_Mutation SNP C G CPCG0210-F1 Unknown Somatic WXS Illumina HiSeq 2500 AMDHD2 51005 broad.mit.edu hg19 16 2579489 2579489 + Missense_Mutation SNP C T TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx PDPK1 5170 broad.mit.edu hg19 16 2636776 2636776 + Missense_Mutation SNP G A TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx SRRM2 23524 broad.mit.edu hg19 16 2816345 2816345 + Missense_Mutation SNP C T P08-1541 Unknown Somatic WGS Illumina GAIIx SRRM2 23524 CPCGene hg19 16 2817523 2817523 + Missense_Mutation SNP G A CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZG16B 124220 broad.mit.edu hg19 16 2880299 2880299 + Missense_Mutation SNP C T PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx PAQR4 124222 broad.mit.edu hg19 16 3021678 3021678 + Missense_Mutation SNP G A PR-3035-Tumor Unknown Somatic WXS Illumina GAIIx ZNF213 7760 broad.mit.edu hg19 16 3191180 3191180 + Missense_Mutation SNP C G PR-2761-Tumor Unknown Somatic WXS Illumina GAIIx ZNF75A 7627 CPCGene hg19 16 3367718 3367718 + Missense_Mutation SNP G T CPCG0374-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZSCAN32 54925 broad.mit.edu hg19 16 3440104 3440104 + Missense_Mutation SNP T A TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx ZNF174 7727 broad.mit.edu hg19 16 3458493 3458493 + Missense_Mutation SNP C T P05-620 Unknown Somatic WGS Illumina GAIIx ZNF597 146434 broad.mit.edu hg19 16 3487540 3487540 + Splice_Site SNP T G TCGA-EJ-7784-01 Unknown Somatic WXS Illumina GAIIx SLX4 84464 broad.mit.edu hg19 16 3658512 3658512 + Missense_Mutation SNP C G TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx CREBBP 1387 broad.mit.edu hg19 16 3778253 3778253 + Missense_Mutation SNP C T TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx ADCY9 115 broad.mit.edu hg19 16 4015892 4015892 + Missense_Mutation SNP C T PR-08-784 Unknown Somatic WGS Illumina GAIIx GLIS2 84662 broad.mit.edu hg19 16 4387206 4387206 + Missense_Mutation SNP C T P08-501 Unknown Somatic WGS Illumina GAIIx CORO7 79585 broad.mit.edu hg19 16 4405295 4405295 + Missense_Mutation SNP C A P05-3436-Tumor Unknown Somatic WXS Illumina GAIIx PPL 5493 CPCGene hg19 16 4935239 4935239 + Missense_Mutation SNP G A CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 SEC14L5 9717 broad.mit.edu hg19 16 5038269 5038269 + Missense_Mutation SNP C G TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx SEC14L5 9717 broad.mit.edu hg19 16 5058605 5058605 + Missense_Mutation SNP C T TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx RBFOX1 54715 broad.mit.edu hg19 16 7645620 7645620 + Missense_Mutation SNP G A PR-05-3595 Unknown Somatic WGS Illumina GAIIx RBFOX1 54715 broad.mit.edu hg19 16 7657342 7657342 + Splice_Site SNP T G TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx RBFOX1 54715 broad.mit.edu hg19 16 7703846 7703846 + Missense_Mutation SNP G A P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx RBFOX1 54715 broad.mit.edu hg19 16 7759095 7759095 + Missense_Mutation SNP G A TCGA-HC-7736-01 Unknown Somatic WXS Illumina GAIIx TEKT5 146279 broad.mit.edu hg19 16 10775939 10775939 + Missense_Mutation SNP C T PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx CLEC16A 23274 CPCGene hg19 16 11136197 11136197 + Missense_Mutation SNP G T CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 TXNDC11 51061 broad.mit.edu hg19 16 11785489 11785489 + Missense_Mutation SNP G A TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx CPPED1 55313 broad.mit.edu hg19 16 12798661 12798661 + Missense_Mutation SNP G A TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx CPPED1 55313 broad.mit.edu hg19 16 12798662 12798662 + Missense_Mutation SNP C A TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx SHISA9 729993 CPCGene hg19 16 13328896 13328896 + Missense_Mutation SNP T A CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARL6IP1 23204 broad.mit.edu hg19 16 18809333 18809333 + Missense_Mutation SNP G T TCGA-HC-7740-01 Unknown Somatic WGS Illumina GAIIx TMC7 79905 broad.mit.edu hg19 16 19041626 19041626 + Missense_Mutation SNP G A TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx COQ7 10229 broad.mit.edu hg19 16 19089430 19089430 + Missense_Mutation SNP A G P09-2497-Tumor Unknown Somatic WXS Illumina GAIIx GDE1 51573 broad.mit.edu hg19 16 19519049 19519049 + Missense_Mutation SNP T C TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx GP2 2813 broad.mit.edu hg19 16 20328610 20328610 + Missense_Mutation SNP A C PR-04-3347-Tumor Unknown Somatic WXS Illumina GAIIx DNAH3 55567 broad.mit.edu hg19 16 20952769 20952769 + Missense_Mutation SNP C A TCGA-EJ-8470-01 Unknown Somatic WXS Illumina GAIIx DNAH3 55567 broad.mit.edu hg19 16 21152673 21152673 + Missense_Mutation SNP G C P04-594-Tumor Unknown Somatic WXS Illumina GAIIx DNAH3 55567 CPCGene hg19 16 21157406 21157406 + Missense_Mutation SNP C T CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 PDZD9 255762 CPCGene hg19 16 21995675 21995675 + Missense_Mutation SNP A G CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 VWA3A 146177 broad.mit.edu hg19 16 22120821 22120821 + Missense_Mutation SNP G A TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx POLR3E 55718 broad.mit.edu hg19 16 22337242 22337242 + Missense_Mutation SNP C T PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx SCNN1B 6338 broad.mit.edu hg19 16 23360106 23360106 + Missense_Mutation SNP C T P09-1580-Tumor Unknown Somatic WXS Illumina GAIIx SCNN1B 6338 broad.mit.edu hg19 16 23391983 23391983 + Missense_Mutation SNP C T TCGA-J4-A67N-01 Unknown Somatic WXS Illumina GAIIx COG7 91949 broad.mit.edu hg19 16 23436137 23436137 + Missense_Mutation SNP C A TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx PRKCB 5579 broad.mit.edu hg19 16 24105528 24105528 + Missense_Mutation SNP T C TCGA-HC-7745-01 Unknown Somatic WXS Illumina GAIIx CACNG3 10368 broad.mit.edu hg19 16 24373082 24373082 + Missense_Mutation SNP C T P00-000450-Tumor Unknown Somatic WXS Illumina GAIIx CACNG3 10368 broad.mit.edu hg19 16 24373167 24373167 + Missense_Mutation SNP C T PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx RBBP6 5930 broad.mit.edu hg19 16 24567694 24567694 + Missense_Mutation SNP G C TCGA-J4-A67L-01 Unknown Somatic WXS Illumina GAIIx RBBP6 5930 CPCGene hg19 16 24570977 24570977 + Missense_Mutation SNP G T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 RBBP6 5930 broad.mit.edu hg19 16 24573020 24573020 + Missense_Mutation SNP A G P09-37 Unknown Somatic WGS Illumina GAIIx ZKSCAN2 342357 EMBL hg19 16 25251739 25251739 + Missense_Mutation SNP T C EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 ZKSCAN2 342357 CPCGene hg19 16 25258639 25258639 + Missense_Mutation SNP T G CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 IL4R 3566 broad.mit.edu hg19 16 27353479 27353479 + Missense_Mutation SNP C T TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx IL4R 3566 broad.mit.edu hg19 16 27373986 27373986 + Missense_Mutation SNP G T TCGA-EJ-5504-01 Unknown Somatic WXS Illumina GAIIx KIAA0556 23247 broad.mit.edu hg19 16 27585275 27585275 + Missense_Mutation SNP G T TCGA-G9-6384-01 Unknown Somatic WXS Illumina GAIIx XPO6 23214 CPCGene hg19 16 28128767 28128767 + Missense_Mutation SNP C A CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 XPO6 23214 CPCGene hg19 16 28167497 28167497 + Missense_Mutation SNP T G CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 APOBR 55911 broad.mit.edu hg19 16 28507295 28507295 + Missense_Mutation SNP G A TCGA-HC-8260-01 Unknown Somatic WXS Illumina GAIIx APOBR 55911 broad.mit.edu hg19 16 28507295 28507295 + Missense_Mutation SNP G A TCGA-EJ-8470-01 Unknown Somatic WXS Illumina GAIIx APOBR 55911 EMBL hg19 16 28507424 28507424 + Missense_Mutation SNP C T EOPC-02 Unknown Somatic WGS Illumina HiSeq2000 APOBR 55911 broad.mit.edu hg19 16 28507424 28507424 + Missense_Mutation SNP C T TCGA-EJ-5509-01 Unknown Somatic WXS Illumina GAIIx TUFM 7284 broad.mit.edu hg19 16 28856321 28856321 + Missense_Mutation SNP T C P05-2594-Tumor Unknown Somatic WXS Illumina GAIIx MAZ 4150 broad.mit.edu hg19 16 29820948 29820948 + Missense_Mutation SNP T A TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx PRRT2 112476 broad.mit.edu hg19 16 29825109 29825109 + Missense_Mutation SNP G A TCGA-Y6-A8TL-01 Unknown Somatic WXS Illumina GAIIx SEZ6L2 26470 broad.mit.edu hg19 16 29888605 29888605 + Missense_Mutation SNP T C P08-1541 Unknown Somatic WGS Illumina GAIIx ASPHD1 253982 broad.mit.edu hg19 16 29912544 29912544 + Missense_Mutation SNP C T PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx TBC1D10B 26000 CPCGene hg19 16 30369333 30369333 + Missense_Mutation SNP C A CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF747 65988 broad.mit.edu hg19 16 30545567 30545567 + Missense_Mutation SNP C A TCGA-G9-6365-01 Unknown Somatic WGS Illumina GAIIx ZNF689 115509 broad.mit.edu hg19 16 30616438 30616438 + Missense_Mutation SNP C T TCGA-J4-A83M-01 Unknown Somatic WXS Illumina GAIIx SRCAP 10847 broad.mit.edu hg19 16 30715429 30715429 + Missense_Mutation SNP C T TCGA-J4-A67S-01 Unknown Somatic WXS Illumina GAIIx SRCAP 10847 CPCGene hg19 16 30718620 30718620 + Missense_Mutation SNP C T CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 SRCAP 10847 broad.mit.edu hg19 16 30724602 30724602 + Missense_Mutation SNP T C TCGA-XJ-A9DQ-01 Unknown Somatic WXS Illumina GAIIx RNF40 9810 broad.mit.edu hg19 16 30779658 30779658 + Missense_Mutation SNP G T P04-1084 Unknown Somatic WGS Illumina GAIIx RNF40 9810 CPCGene hg19 16 30780015 30780015 + Missense_Mutation SNP T C CPCG0334-F1 Unknown Somatic WXS Illumina HiSeq 2500 ITGAX 3687 broad.mit.edu hg19 16 31372440 31372440 + Missense_Mutation SNP G A TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx ITGAD 3681 broad.mit.edu hg19 16 31427932 31427932 + Missense_Mutation SNP G A TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx ARMC5 79798 broad.mit.edu hg19 16 31477833 31477833 + Missense_Mutation SNP C T PR-05-3595 Unknown Somatic WGS Illumina GAIIx ARMC5 79798 CPCGene hg19 16 31477838 31477838 + Missense_Mutation SNP G T CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 NETO2 81831 CPCGene hg19 16 47117658 47117658 + Missense_Mutation SNP A G CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 PHKB 5257 broad.mit.edu hg19 16 47694671 47694671 + Missense_Mutation SNP G A TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx ABCC12 94160 broad.mit.edu hg19 16 48139193 48139193 + Missense_Mutation SNP C T TCGA-G9-6498-01 Unknown Somatic WXS Illumina GAIIx ABCC11 85320 broad.mit.edu hg19 16 48258247 48258247 + Missense_Mutation SNP C G TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx ABCC11 85320 CPCGene hg19 16 48261824 48261824 + Missense_Mutation SNP G T CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 LONP2 83752 broad.mit.edu hg19 16 48295477 48295477 + Missense_Mutation SNP T G P00-000450-Tumor Unknown Somatic WXS Illumina GAIIx LONP2 83752 broad.mit.edu hg19 16 48304052 48304052 + Missense_Mutation SNP A G PR-3042 Unknown Somatic WGS Illumina GAIIx CBLN1 869 broad.mit.edu hg19 16 49314902 49314902 + Missense_Mutation SNP C A TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx HEATR3 55027 broad.mit.edu hg19 16 50136206 50136206 + Missense_Mutation SNP G T TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx NOD2 64127 broad.mit.edu hg19 16 50759444 50759444 + Missense_Mutation SNP C T PR-2621 Unknown Somatic WGS Illumina GAIIx SALL1 6299 CPCGene hg19 16 51171119 51171119 + Missense_Mutation SNP G A CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 SALL1 6299 CPCGene hg19 16 51171415 51171415 + Missense_Mutation SNP G A CPCG0401-F1 Unknown Somatic WXS Illumina HiSeq 2500 SALL1 6299 CPCGene hg19 16 51171454 51171454 + Missense_Mutation SNP C T CPCG0412-F1 Unknown Somatic WXS Illumina HiSeq 2500 SALL1 6299 broad.mit.edu hg19 16 51172768 51172768 + Missense_Mutation SNP A G TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx SALL1 6299 broad.mit.edu hg19 16 51173912 51173912 + Missense_Mutation SNP G A PR-09-2517-Tumor Unknown Somatic WXS Illumina GAIIx TOX3 27324 broad.mit.edu hg19 16 52484190 52484190 + Missense_Mutation SNP C T TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx CHD9 80205 broad.mit.edu hg19 16 53243397 53243397 + Missense_Mutation SNP C A TCGA-HC-8261-01 Unknown Somatic WXS Illumina GAIIx CHD9 80205 CPCGene hg19 16 53352238 53352238 + Missense_Mutation SNP A C CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 RBL2 5934 broad.mit.edu hg19 16 53485706 53485706 + Missense_Mutation SNP T C TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx IRX5 10265 broad.mit.edu hg19 16 54966502 54966502 + Missense_Mutation SNP A G TCGA-G9-6348-01 Unknown Somatic WXS Illumina GAIIx IRX6 79190 broad.mit.edu hg19 16 55362754 55362754 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx IRX6 79190 broad.mit.edu hg19 16 55363122 55363122 + Missense_Mutation SNP G T TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx CAPNS2 84290 broad.mit.edu hg19 16 55600927 55600927 + Missense_Mutation SNP C G P05-620 Unknown Somatic WGS Illumina GAIIx SLC6A2 6530 CPCGene hg19 16 55734084 55734084 + Missense_Mutation SNP C A CPCG0206-F1 Unknown Somatic WXS Illumina HiSeq 2500 CES5A 221223 CPCGene hg19 16 55903594 55903594 + Missense_Mutation SNP G A CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 OGFOD1 55239 broad.mit.edu hg19 16 56485625 56485625 + Missense_Mutation SNP C A TCGA-HC-7747-01 Unknown Somatic WXS Illumina GAIIx SLC12A3 6559 broad.mit.edu hg19 16 56947274 56947274 + Missense_Mutation SNP T A PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx NLRC5 84166 broad.mit.edu hg19 16 57060031 57060031 + Missense_Mutation SNP G T PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx NLRC5 84166 broad.mit.edu hg19 16 57116361 57116361 + Missense_Mutation SNP C T TCGA-EJ-7123-01 Unknown Somatic WXS Illumina GAIIx CCL22 6367 broad.mit.edu hg19 16 57392735 57392735 + Missense_Mutation SNP C T PR-02-2072-Tumor Unknown Somatic WXS Illumina GAIIx DOK4 55715 CPCGene hg19 16 57507319 57507319 + Missense_Mutation SNP G T CPCG0354-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIFC3 3801 broad.mit.edu hg19 16 57803557 57803557 + Missense_Mutation SNP G A PR-08-4154 Unknown Somatic WGS Illumina GAIIx CSNK2A2 1459 broad.mit.edu hg19 16 58201614 58201614 + Missense_Mutation SNP C T PR-03-3125 Unknown Somatic WGS Illumina GAIIx PRSS54 221191 broad.mit.edu hg19 16 58324877 58324877 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx GINS3 64785 broad.mit.edu hg19 16 58437218 58437218 + Missense_Mutation SNP T C TCGA-HC-7747-01 Unknown Somatic WXS Illumina GAIIx CNOT1 23019 broad.mit.edu hg19 16 58621140 58621140 + Missense_Mutation SNP A C TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx CDH8 1006 CPCGene hg19 16 61891110 61891110 + Missense_Mutation SNP C T CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 CDH5 1003 broad.mit.edu hg19 16 66436911 66436911 + Missense_Mutation SNP G A TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx CCDC79 0 broad.mit.edu hg19 16 66792739 66792739 + Missense_Mutation SNP T A P08-5852 Unknown Somatic WGS Illumina GAIIx FHOD1 29109 broad.mit.edu hg19 16 67267851 67267851 + Missense_Mutation SNP A G TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx SLC9A5 6553 broad.mit.edu hg19 16 67305047 67305047 + Missense_Mutation SNP C T TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx CTCF 10664 broad.mit.edu hg19 16 67650781 67650781 + Missense_Mutation SNP A C P07-5318 Unknown Somatic WGS Illumina GAIIx ENKD1 84080 broad.mit.edu hg19 16 67700164 67700164 + Missense_Mutation SNP T C TCGA-G9-6343-01 Unknown Somatic WXS Illumina GAIIx ENKD1 84080 broad.mit.edu hg19 16 67700332 67700332 + Missense_Mutation SNP G C P08-501 Unknown Somatic WGS Illumina GAIIx EDC4 23644 broad.mit.edu hg19 16 67909965 67909965 + Missense_Mutation SNP G A TCGA-EJ-7315-01 Unknown Somatic WXS Illumina GAIIx EDC4 23644 EMBL hg19 16 67915734 67915734 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 SLC12A4 6560 broad.mit.edu hg19 16 67986109 67986109 + Missense_Mutation SNP T C PR-STID0000003127 Unknown Somatic WGS Illumina GAIIx DPEP2 64174 broad.mit.edu hg19 16 68024898 68024898 + Missense_Mutation SNP C A TCGA-J4-A67K-01 Unknown Somatic WXS Illumina GAIIx DUS2 54920 broad.mit.edu hg19 16 68104843 68104843 + Missense_Mutation SNP C T TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx CDH3 1001 broad.mit.edu hg19 16 68712160 68712160 + Missense_Mutation SNP T C TCGA-HC-8261-01 Unknown Somatic WXS Illumina GAIIx CDH3 1001 CPCGene hg19 16 68729755 68729755 + Missense_Mutation SNP A G CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 CDH3 1001 broad.mit.edu hg19 16 68732283 68732283 + Missense_Mutation SNP G A TCGA-G9-6338-01 Unknown Somatic WXS Illumina GAIIx CDH1 999 broad.mit.edu hg19 16 68846165 68846165 + Missense_Mutation SNP C T TCGA-G9-6365-01 Unknown Somatic WGS Illumina GAIIx WWP2 11060 CPCGene hg19 16 69874158 69874158 + Missense_Mutation SNP T A CPCG0269-F1 Unknown Somatic WXS Illumina HiSeq 2500 FUK 197258 broad.mit.edu hg19 16 70506485 70506485 + Missense_Mutation SNP A G TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx VAC14 55697 broad.mit.edu hg19 16 70731072 70731072 + Missense_Mutation SNP T A PR-06-1749 Unknown Somatic WGS Illumina GAIIx VAC14 55697 CPCGene hg19 16 70814793 70814793 + Missense_Mutation SNP G A CPCG0267-F1 Unknown Somatic WXS Illumina HiSeq 2500 CALB2 794 broad.mit.edu hg19 16 71419500 71419500 + Missense_Mutation SNP C T TCGA-EJ-5530-01 Unknown Somatic WXS Illumina GAIIx ZNF19 7567 broad.mit.edu hg19 16 71512203 71512203 + Missense_Mutation SNP T C TCGA-G9-6354-01 Unknown Somatic WXS Illumina GAIIx HPR 3250 CPCGene hg19 16 72110870 72110870 + Missense_Mutation SNP G C CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZFHX3 463 broad.mit.edu hg19 16 72991392 72991392 + Missense_Mutation SNP G A TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx ZFHX3 463 CPCGene hg19 16 72991715 72991715 + Missense_Mutation SNP A G CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAT1 23536 broad.mit.edu hg19 16 75646435 75646435 + Missense_Mutation SNP C T P03-2345 Unknown Somatic WGS Illumina GAIIx CNTNAP4 85445 CPCGene hg19 16 76528874 76528874 + Missense_Mutation SNP G A CPCG0237-F1 Unknown Somatic WXS Illumina HiSeq 2500 CNTNAP4 85445 broad.mit.edu hg19 16 76532484 76532484 + Missense_Mutation SNP T C TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx PKD1L2 114780 CPCGene hg19 16 81241169 81241169 + Missense_Mutation SNP A C CPCG0267-F1 Unknown Somatic WXS Illumina HiSeq 2500 CDH13 1012 broad.mit.edu hg19 16 83781821 83781821 + Missense_Mutation SNP C T P08-1541 Unknown Somatic WGS Illumina GAIIx SLC38A8 146167 broad.mit.edu hg19 16 84075582 84075582 + Missense_Mutation SNP C T TCGA-J4-A67S-01 Unknown Somatic WXS Illumina GAIIx SLC38A8 146167 broad.mit.edu hg19 16 84075693 84075693 + Missense_Mutation SNP G A PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx USP10 9100 broad.mit.edu hg19 16 84793526 84793526 + Missense_Mutation SNP T C TCGA-VP-A87J-01 Unknown Somatic WXS Illumina GAIIx USP10 9100 broad.mit.edu hg19 16 84793802 84793802 + Missense_Mutation SNP A G PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx MTHFSD 64779 broad.mit.edu hg19 16 86565782 86565782 + Missense_Mutation SNP G A TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx FOXC2 2303 broad.mit.edu hg19 16 86601138 86601138 + Missense_Mutation SNP C T TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx ZCCHC14 23174 CPCGene hg19 16 87445189 87445189 + Missense_Mutation SNP G C CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 JPH3 57338 broad.mit.edu hg19 16 87723838 87723838 + Missense_Mutation SNP T C TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx KLHDC4 54758 CPCGene hg19 16 87744967 87744967 + Missense_Mutation SNP A C CPCG0358-F1 Unknown Somatic WXS Illumina HiSeq 2500 KLHDC4 54758 broad.mit.edu hg19 16 87788845 87788845 + Missense_Mutation SNP G T TCGA-J4-A67O-01 Unknown Somatic WXS Illumina GAIIx ZNF469 84627 broad.mit.edu hg19 16 88496488 88496488 + Missense_Mutation SNP C T P05-1657 Unknown Somatic WGS Illumina GAIIx ZNF469 84627 CPCGene hg19 16 88499314 88499314 + Missense_Mutation SNP C T CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 GALNS 2588 broad.mit.edu hg19 16 88904133 88904133 + Missense_Mutation SNP C T TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx ACSF3 197322 CPCGene hg19 16 89220512 89220512 + Missense_Mutation SNP C G CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 FANCA 2175 CPCGene hg19 16 89816143 89816143 + Missense_Mutation SNP G C CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 FANCA 2175 broad.mit.edu hg19 16 89862404 89862404 + Missense_Mutation SNP T C P07-5037 Unknown Somatic WGS Illumina GAIIx RPH3AL 9501 CPCGene hg19 17 65556 65556 + Missense_Mutation SNP G C CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 VPS53 55275 CPCGene hg19 17 440330 440330 + Missense_Mutation SNP G A CPCG0374-F1 Unknown Somatic WXS Illumina HiSeq 2500 TIMM22 29928 CPCGene hg19 17 900414 900414 + Missense_Mutation SNP C T CPCG0380-F1 Unknown Somatic WXS Illumina HiSeq 2500 ABR 29 broad.mit.edu hg19 17 914059 914059 + Missense_Mutation SNP C A PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx ABR 29 CPCGene hg19 17 1028605 1028605 + Missense_Mutation SNP C T CPCG0255-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRPF8 10594 broad.mit.edu hg19 17 1559946 1559946 + Missense_Mutation SNP A C TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx WDR81 124997 broad.mit.edu hg19 17 1628389 1628389 + Missense_Mutation SNP G A P08-716 Unknown Somatic WGS Illumina GAIIx RPA1 6117 broad.mit.edu hg19 17 1787221 1787221 + Missense_Mutation SNP C G TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx DPH1 1801 CPCGene hg19 17 1939263 1939263 + Splice_Site SNP G T CPCG0078-F1 Unknown Somatic WXS Illumina HiSeq 2500 SMG6 23293 CPCGene hg19 17 2186996 2186996 + Missense_Mutation SNP G A CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 OR3A3 8392 broad.mit.edu hg19 17 3324770 3324770 + Missense_Mutation SNP T C TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx OR3A3 8392 broad.mit.edu hg19 17 3324771 3324771 + Missense_Mutation SNP A C TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx TRPV3 162514 broad.mit.edu hg19 17 3445844 3445844 + Missense_Mutation SNP G A TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx P2RX5 5026 broad.mit.edu hg19 17 3593952 3593952 + Missense_Mutation SNP G A TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx ITGAE 3682 broad.mit.edu hg19 17 3649106 3649106 + Missense_Mutation SNP G A TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx P2RX1 5023 broad.mit.edu hg19 17 3819419 3819419 + Missense_Mutation SNP C T PR-09-5702-Tumor Unknown Somatic WXS Illumina GAIIx ZZEF1 23140 broad.mit.edu hg19 17 3979960 3979960 + Missense_Mutation SNP A T P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx MYBBP1A 10514 broad.mit.edu hg19 17 4443647 4443647 + Missense_Mutation SNP C T P07-144 Unknown Somatic WGS Illumina GAIIx MYBBP1A 10514 broad.mit.edu hg19 17 4455487 4455487 + Missense_Mutation SNP T A P05-3436-Tumor Unknown Somatic WXS Illumina GAIIx GGT6 124975 CPCGene hg19 17 4463689 4463689 + Missense_Mutation SNP T C CPCG0412-F1 Unknown Somatic WXS Illumina HiSeq 2500 SMTNL2 342527 CPCGene hg19 17 4500505 4500505 + Missense_Mutation SNP C T CPCG0414-F1 Unknown Somatic WXS Illumina HiSeq 2500 PELP1 27043 broad.mit.edu hg19 17 4575984 4575984 + Missense_Mutation SNP A G PR-3035-Tumor Unknown Somatic WXS Illumina GAIIx PELP1 27043 broad.mit.edu hg19 17 4579133 4579133 + Missense_Mutation SNP C T PR-02-2072-Tumor Unknown Somatic WXS Illumina GAIIx ARRB2 409 broad.mit.edu hg19 17 4621304 4621304 + Missense_Mutation SNP T G PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx PLD2 5338 broad.mit.edu hg19 17 4726130 4726130 + Missense_Mutation SNP G A PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx CHRNE 1145 broad.mit.edu hg19 17 4804196 4804196 + Missense_Mutation SNP C G PR-04-3113-Tumor Unknown Somatic WXS Illumina GAIIx PFN1 5216 CPCGene hg19 17 4851596 4851596 + Missense_Mutation SNP A T CPCG0324-F1 Unknown Somatic WXS Illumina HiSeq 2500 USP6 9098 CPCGene hg19 17 5042590 5042590 + Missense_Mutation SNP G A CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF594 84622 broad.mit.edu hg19 17 5085922 5085922 + Missense_Mutation SNP C A P05-1657 Unknown Somatic WGS Illumina GAIIx NLRP1 22861 CPCGene hg19 17 5433994 5433994 + Missense_Mutation SNP G A CPCG0191-F1 Unknown Somatic WXS Illumina HiSeq 2500 FBXO39 162517 broad.mit.edu hg19 17 6683788 6683788 + Missense_Mutation SNP G A P09-1580-Tumor Unknown Somatic WXS Illumina GAIIx FBXO39 162517 broad.mit.edu hg19 17 6684167 6684167 + Missense_Mutation SNP C T PR-03-870-Tumor Unknown Somatic WXS Illumina GAIIx TEKT1 83659 broad.mit.edu hg19 17 6733629 6733629 + Missense_Mutation SNP G T TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx DLG4 1742 CPCGene hg19 17 7100098 7100098 + Missense_Mutation SNP C T CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPS2 2874 broad.mit.edu hg19 17 7217275 7217275 + Missense_Mutation SNP G C TCGA-G9-6342-01 Unknown Somatic WXS Illumina GAIIx NEURL4 84461 broad.mit.edu hg19 17 7224899 7224899 + Missense_Mutation SNP G A PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx TMEM102 284114 broad.mit.edu hg19 17 7340329 7340329 + Missense_Mutation SNP C T TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx POLR2A 5430 broad.mit.edu hg19 17 7416778 7416778 + Missense_Mutation SNP C G P05-3436-Tumor Unknown Somatic WXS Illumina GAIIx POLR2A 5430 CPCGene hg19 17 7416893 7416893 + Missense_Mutation SNP A C CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATP1B2 482 CPCGene hg19 17 7558890 7558890 + Missense_Mutation SNP G A CPCG0259-F1 Unknown Somatic WXS Illumina HiSeq 2500 TP53 7157 CPCGene hg19 17 7577094 7577094 + Missense_Mutation SNP G A CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 TP53 7157 CPCGene hg19 17 7577102 7577102 + Missense_Mutation SNP C T CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 TP53 7157 CPCGene hg19 17 7577120 7577120 + Missense_Mutation SNP C T CPCG0358-F1 Unknown Somatic WXS Illumina HiSeq 2500 TP53 7157 broad.mit.edu hg19 17 7577121 7577121 + Missense_Mutation SNP G A PR-04-1243 Unknown Somatic WGS Illumina GAIIx TP53 7157 CPCGene hg19 17 7577157 7577157 + Splice_Site SNP T C CPCG0410-F1 Unknown Somatic WXS Illumina HiSeq 2500 TP53 7157 broad.mit.edu hg19 17 7577536 7577536 + Missense_Mutation SNP T C TCGA-J4-A67L-01 Unknown Somatic WXS Illumina GAIIx TP53 7157 broad.mit.edu hg19 17 7577538 7577538 + Missense_Mutation SNP C T TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx TP53 7157 broad.mit.edu hg19 17 7577538 7577538 + Missense_Mutation SNP C T P07-5036-Tumor Unknown Somatic WXS Illumina GAIIx TP53 7157 CPCGene hg19 17 7577539 7577539 + Missense_Mutation SNP G A CPCG0263-F1 Unknown Somatic WXS Illumina HiSeq 2500 TP53 7157 broad.mit.edu hg19 17 7577548 7577548 + Missense_Mutation SNP C T TCGA-EJ-5521-01 Unknown Somatic WXS Illumina GAIIx TP53 7157 CPCGene hg19 17 7577568 7577568 + Missense_Mutation SNP C A CPCG0234-F1 Unknown Somatic WXS Illumina HiSeq 2500 TP53 7157 EMBL hg19 17 7578265 7578265 + Missense_Mutation SNP A G EOPC-06 Unknown Somatic WGS Illumina HiSeq2000 TP53 7157 broad.mit.edu hg19 17 7578457 7578457 + Missense_Mutation SNP C T P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx TP53 7157 broad.mit.edu hg19 17 7578509 7578509 + Missense_Mutation SNP A C TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx TP53 7157 CPCGene hg19 17 7578525 7578525 + Missense_Mutation SNP G C CPCG0199-F1 Unknown Somatic WXS Illumina HiSeq 2500 TP53 7157 broad.mit.edu hg19 17 7578555 7578555 + Splice_Site SNP C A P09-37 Unknown Somatic WGS Illumina GAIIx DNAH2 146754 broad.mit.edu hg19 17 7690227 7690227 + Missense_Mutation SNP A T TCGA-G9-6348-01 Unknown Somatic WXS Illumina GAIIx DNAH2 146754 broad.mit.edu hg19 17 7734723 7734723 + Missense_Mutation SNP G A P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx KDM6B 23135 CPCGene hg19 17 7749810 7749810 + Missense_Mutation SNP G A CPCG0123-F1 Unknown Somatic WXS Illumina HiSeq 2500 CHD3 1107 broad.mit.edu hg19 17 7804250 7804250 + Missense_Mutation SNP A G TCGA-Y6-A8TL-01 Unknown Somatic WXS Illumina GAIIx CNTROB 116840 broad.mit.edu hg19 17 7836490 7836490 + Missense_Mutation SNP G T TCGA-VP-A87J-01 Unknown Somatic WXS Illumina GAIIx PFAS 5198 CPCGene hg19 17 8161411 8161411 + Missense_Mutation SNP C T CPCG0380-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARHGEF15 22899 broad.mit.edu hg19 17 8221715 8221715 + Missense_Mutation SNP G A TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx MYH10 4628 broad.mit.edu hg19 17 8409745 8409745 + Missense_Mutation SNP C T TCGA-G9-6333-01 Unknown Somatic WXS Illumina GAIIx PIK3R6 146850 CPCGene hg19 17 8736267 8736267 + Missense_Mutation SNP G T CPCG0048-F1 Unknown Somatic WXS Illumina HiSeq 2500 PIK3R6 146850 broad.mit.edu hg19 17 8738737 8738737 + Missense_Mutation SNP C T PR-3051-Tumor Unknown Somatic WXS Illumina GAIIx USP43 124739 CPCGene hg19 17 9631345 9631345 + Missense_Mutation SNP C A CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 DHRS7C 201140 CPCGene hg19 17 9676175 9676175 + Missense_Mutation SNP G A CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 MYH4 4622 CPCGene hg19 17 10348591 10348591 + Missense_Mutation SNP C T CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 MYH4 4622 broad.mit.edu hg19 17 10350362 10350362 + Missense_Mutation SNP C T TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx MYH4 4622 broad.mit.edu hg19 17 10350461 10350461 + Missense_Mutation SNP G A TCGA-G9-6371-01 Unknown Somatic WXS Illumina GAIIx MYH4 4622 broad.mit.edu hg19 17 10355525 10355525 + Missense_Mutation SNP G A TCGA-G9-6348-01 Unknown Somatic WXS Illumina GAIIx MYH4 4622 broad.mit.edu hg19 17 10356642 10356642 + Missense_Mutation SNP T G TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx MYH1 4619 broad.mit.edu hg19 17 10404746 10404746 + Missense_Mutation SNP C T PR-05-839-Tumor Unknown Somatic WXS Illumina GAIIx MYH3 4621 broad.mit.edu hg19 17 10549084 10549084 + Missense_Mutation SNP C T PR-3043 Unknown Somatic WGS Illumina GAIIx DNAH9 1770 broad.mit.edu hg19 17 11535997 11535997 + Missense_Mutation SNP C A TCGA-EJ-7784-01 Unknown Somatic WXS Illumina GAIIx DNAH9 1770 CPCGene hg19 17 11786949 11786949 + Missense_Mutation SNP C T CPCG0387-F1 Unknown Somatic WXS Illumina HiSeq 2500 DNAH9 1770 broad.mit.edu hg19 17 11797691 11797691 + Missense_Mutation SNP A T PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx ARHGAP44 9912 CPCGene hg19 17 12877460 12877460 + Missense_Mutation SNP C T CPCG0184-F1 Unknown Somatic WXS Illumina HiSeq 2500 ELAC2 60528 CPCGene hg19 17 12897064 12897064 + Missense_Mutation SNP C T CPCG0262-F1 Unknown Somatic WXS Illumina HiSeq 2500 TRIM16 10626 broad.mit.edu hg19 17 15532066 15532066 + Missense_Mutation SNP G A TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx NCOR1 9611 broad.mit.edu hg19 17 15965015 15965015 + Missense_Mutation SNP T C TCGA-HC-8261-01 Unknown Somatic WXS Illumina GAIIx NCOR1 9611 broad.mit.edu hg19 17 15971376 15971376 + Missense_Mutation SNP G A TCGA-HC-7212-01 Unknown Somatic WXS Illumina GAIIx NCOR1 9611 broad.mit.edu hg19 17 15989710 15989710 + Missense_Mutation SNP G A TCGA-J4-A83L-01 Unknown Somatic WXS Illumina GAIIx NCOR1 9611 broad.mit.edu hg19 17 15989730 15989730 + Missense_Mutation SNP T G PR-3043 Unknown Somatic WGS Illumina GAIIx NCOR1 9611 broad.mit.edu hg19 17 16012098 16012098 + Splice_Site SNP A C P05-620 Unknown Somatic WGS Illumina GAIIx ZNF287 57336 broad.mit.edu hg19 17 16467045 16467045 + Missense_Mutation SNP G A TCGA-G9-6351-01 Unknown Somatic WXS Illumina GAIIx CCDC144A 9720 broad.mit.edu hg19 17 16593777 16593777 + Missense_Mutation SNP C T TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx FLCN 201163 broad.mit.edu hg19 17 17131317 17131317 + Missense_Mutation SNP C T P05-1657 Unknown Somatic WGS Illumina GAIIx NT5M 56953 broad.mit.edu hg19 17 17250218 17250218 + Missense_Mutation SNP C T TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx RAI1 10743 broad.mit.edu hg19 17 17697111 17697111 + Missense_Mutation SNP G A PR-3048-Tumor Unknown Somatic WXS Illumina GAIIx MYO15A 51168 broad.mit.edu hg19 17 18023607 18023607 + Missense_Mutation SNP C T TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx MYO15A 51168 broad.mit.edu hg19 17 18024963 18024963 + Missense_Mutation SNP G A TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx MYO15A 51168 broad.mit.edu hg19 17 18025214 18025214 + Missense_Mutation SNP C G PR-06-3199 Unknown Somatic WGS Illumina GAIIx MYO15A 51168 CPCGene hg19 17 18044408 18044408 + Missense_Mutation SNP C T CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 TOP3A 7156 CPCGene hg19 17 18205257 18205257 + Missense_Mutation SNP T G CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 TOP3A 7156 broad.mit.edu hg19 17 18205596 18205596 + Missense_Mutation SNP T C TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx PRPSAP2 5636 CPCGene hg19 17 18832217 18832217 + Missense_Mutation SNP G T CPCG0267-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC5A10 125206 broad.mit.edu hg19 17 18923109 18923109 + Missense_Mutation SNP C T TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx MAPK7 5598 CPCGene hg19 17 19286464 19286464 + Missense_Mutation SNP G A CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 AKAP10 11216 broad.mit.edu hg19 17 19844228 19844228 + Missense_Mutation SNP C T PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx SPECC1 92521 broad.mit.edu hg19 17 20000026 20000026 + Missense_Mutation SNP G A P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx USP22 23326 CPCGene hg19 17 20916194 20916194 + Missense_Mutation SNP T A CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAP2K3 5606 broad.mit.edu hg19 17 21207844 21207844 + Missense_Mutation SNP C T TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx MAP2K3 5606 broad.mit.edu hg19 17 21207844 21207844 + Missense_Mutation SNP C T PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx MAP2K3 5606 CPCGene hg19 17 21207844 21207844 + Missense_Mutation SNP C T CPCG0353-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAP2K3 5606 broad.mit.edu hg19 17 21207844 21207844 + Missense_Mutation SNP C T TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx MAP2K3 5606 EMBL hg19 17 21207844 21207844 + Missense_Mutation SNP C T EOPC-05 Unknown Somatic WGS Illumina HiSeq2000 MAP2K3 5606 broad.mit.edu hg19 17 21207844 21207844 + Missense_Mutation SNP C T PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx KCNJ12 3768 broad.mit.edu hg19 17 21318741 21318741 + Missense_Mutation SNP C T PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx KCNJ12 3768 broad.mit.edu hg19 17 21319121 21319121 + Missense_Mutation SNP C T TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx KCNJ12 3768 broad.mit.edu hg19 17 21319638 21319638 + Missense_Mutation SNP G A TCGA-X4-A8KS-01 Unknown Somatic WXS Illumina GAIIx KSR1 8844 CPCGene hg19 17 25932525 25932525 + Missense_Mutation SNP G A CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 LGALS9 3965 CPCGene hg19 17 25974372 25974372 + Missense_Mutation SNP C T CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 NOS2 4843 broad.mit.edu hg19 17 26099431 26099431 + Missense_Mutation SNP C T TCGA-J4-A67N-01 Unknown Somatic WXS Illumina GAIIx POLDIP2 26073 broad.mit.edu hg19 17 26680002 26680002 + Missense_Mutation SNP G A TCGA-CH-5740-01 Unknown Somatic WXS Illumina GAIIx SDF2 6388 broad.mit.edu hg19 17 26982359 26982359 + Missense_Mutation SNP G A PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx SUPT6H 6830 broad.mit.edu hg19 17 27022376 27022376 + Missense_Mutation SNP A G TCGA-EJ-7794-01 Unknown Somatic WXS Illumina GAIIx DHRS13 147015 broad.mit.edu hg19 17 27229944 27229944 + Missense_Mutation SNP C T TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx TAOK1 57551 broad.mit.edu hg19 17 27844648 27844648 + Missense_Mutation SNP A C TCGA-G9-6365-01 Unknown Somatic WGS Illumina GAIIx SSH2 85464 CPCGene hg19 17 27958046 27958046 + Missense_Mutation SNP C A CPCG0324-F1 Unknown Somatic WXS Illumina HiSeq 2500 OMG 4974 broad.mit.edu hg19 17 29622167 29622167 + Missense_Mutation SNP G A PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx RAB11FIP4 84440 CPCGene hg19 17 29761111 29761111 + Missense_Mutation SNP G A CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 RAB11FIP4 84440 broad.mit.edu hg19 17 29855736 29855736 + Missense_Mutation SNP C T PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx RHOT1 55288 CPCGene hg19 17 30538258 30538258 + Splice_Site SNP G T CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCL13 6357 broad.mit.edu hg19 17 32683559 32683559 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx UNC45B 146862 CPCGene hg19 17 33496889 33496889 + Missense_Mutation SNP G T CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLFN11 91607 broad.mit.edu hg19 17 33690284 33690284 + Missense_Mutation SNP A G P04-1421-Tumor Unknown Somatic WXS Illumina GAIIx MMP28 79148 broad.mit.edu hg19 17 34097178 34097178 + Missense_Mutation SNP G A TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx HEATR9 256957 CPCGene hg19 17 34193769 34193769 + Missense_Mutation SNP T G CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNHIT3 9326 broad.mit.edu hg19 17 34848677 34848677 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx GGNBP2 79893 broad.mit.edu hg19 17 34934521 34934521 + Missense_Mutation SNP G A TCGA-HC-8256-01 Unknown Somatic WXS Illumina GAIIx GGNBP2 79893 broad.mit.edu hg19 17 34945807 34945807 + Missense_Mutation SNP G A TCGA-HC-8259-01 Unknown Somatic WXS Illumina GAIIx LHX1 3975 broad.mit.edu hg19 17 35299551 35299551 + Missense_Mutation SNP C A PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx AATF 26574 broad.mit.edu hg19 17 35345989 35345989 + Missense_Mutation SNP G C PR-06-3199 Unknown Somatic WGS Illumina GAIIx AATF 26574 broad.mit.edu hg19 17 35346608 35346608 + Missense_Mutation SNP G C PR-06-3199 Unknown Somatic WGS Illumina GAIIx AATF 26574 broad.mit.edu hg19 17 35348075 35348075 + Missense_Mutation SNP G A PR-06-3199 Unknown Somatic WGS Illumina GAIIx ACACA 31 CPCGene hg19 17 35486999 35486999 + Splice_Site SNP A G CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 ACACA 31 broad.mit.edu hg19 17 35536315 35536315 + Missense_Mutation SNP A T TCGA-J4-A83M-01 Unknown Somatic WXS Illumina GAIIx GPR179 440435 CPCGene hg19 17 36491058 36491058 + Missense_Mutation SNP C T CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPR179 440435 broad.mit.edu hg19 17 36499576 36499576 + Missense_Mutation SNP G A TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx ARHGAP23 57636 CPCGene hg19 17 36622744 36622744 + Missense_Mutation SNP G T CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 SRCIN1 80725 CPCGene hg19 17 36704937 36704937 + Missense_Mutation SNP C T CPCG0412-F1 Unknown Somatic WXS Illumina HiSeq 2500 MLLT6 4302 broad.mit.edu hg19 17 36872932 36872932 + Missense_Mutation SNP C T PR-06-3199 Unknown Somatic WGS Illumina GAIIx CACNB1 782 broad.mit.edu hg19 17 37334247 37334247 + Missense_Mutation SNP T C TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx FBXL20 84961 broad.mit.edu hg19 17 37417793 37417793 + Missense_Mutation SNP C A PR-08-4154 Unknown Somatic WGS Illumina GAIIx MED1 5469 CPCGene hg19 17 37566067 37566067 + Missense_Mutation SNP T C CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 CDK12 51755 broad.mit.edu hg19 17 37687433 37687433 + Missense_Mutation SNP G A TCGA-EJ-7784-01 Unknown Somatic WXS Illumina GAIIx STARD3 10948 broad.mit.edu hg19 17 37814976 37814976 + Missense_Mutation SNP G A P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx TCAP 8557 broad.mit.edu hg19 17 37821715 37821715 + Missense_Mutation SNP G A TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx PGAP3 93210 broad.mit.edu hg19 17 37830251 37830251 + Missense_Mutation SNP G A TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx ERBB2 2064 broad.mit.edu hg19 17 37879658 37879658 + Missense_Mutation SNP G A TCGA-J4-8200-01 Unknown Somatic WXS Illumina GAIIx ERBB2 2064 broad.mit.edu hg19 17 37881014 37881014 + Missense_Mutation SNP T C TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx GRB7 2886 broad.mit.edu hg19 17 37898527 37898527 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx ZPBP2 124626 CPCGene hg19 17 38028528 38028528 + Missense_Mutation SNP C T CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 GSDMB 55876 broad.mit.edu hg19 17 38062140 38062140 + Missense_Mutation SNP C T TCGA-EJ-5542-01 Unknown Somatic WXS Illumina GAIIx MED24 9862 broad.mit.edu hg19 17 38182576 38182576 + Missense_Mutation SNP A C TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx TNS4 84951 broad.mit.edu hg19 17 38638617 38638617 + Missense_Mutation SNP T G PR-09-5700-Tumor Unknown Somatic WXS Illumina GAIIx KRT26 353288 CPCGene hg19 17 38927478 38927478 + Missense_Mutation SNP G A CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 KRT27 342574 broad.mit.edu hg19 17 38933820 38933820 + Missense_Mutation SNP G A PR-05-3595 Unknown Somatic WGS Illumina GAIIx KRT12 3859 broad.mit.edu hg19 17 39021192 39021192 + Missense_Mutation SNP G A PR-08-2153 Unknown Somatic WGS Illumina GAIIx KRT40 125115 broad.mit.edu hg19 17 39140417 39140417 + Missense_Mutation SNP T C PR-1701 Unknown Somatic WGS Illumina GAIIx KRTAP4-4 84616 broad.mit.edu hg19 17 39316834 39316834 + Missense_Mutation SNP C T TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx KRT37 8688 CPCGene hg19 17 39580409 39580409 + Missense_Mutation SNP G A CPCG0365-F1 Unknown Somatic WXS Illumina HiSeq 2500 KRT38 8687 CPCGene hg19 17 39594442 39594442 + Missense_Mutation SNP G A CPCG0412-F1 Unknown Somatic WXS Illumina HiSeq 2500 KRT32 3882 broad.mit.edu hg19 17 39620643 39620643 + Missense_Mutation SNP T C P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx KRT15 3866 broad.mit.edu hg19 17 39673185 39673185 + Missense_Mutation SNP C T TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx KRT14 3861 broad.mit.edu hg19 17 39742898 39742898 + Missense_Mutation SNP G A TCGA-EJ-7123-01 Unknown Somatic WXS Illumina GAIIx JUP 3728 broad.mit.edu hg19 17 39912083 39912083 + Missense_Mutation SNP G A TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx NT5C3B 115024 broad.mit.edu hg19 17 39991482 39991482 + Missense_Mutation SNP T G P03-2620-Tumor Unknown Somatic WXS Illumina GAIIx NKIRAS2 28511 CPCGene hg19 17 40174539 40174539 + Missense_Mutation SNP C T CPCG0348-F1 Unknown Somatic WXS Illumina HiSeq 2500 RAB5C 5878 CPCGene hg19 17 40282545 40282545 + Missense_Mutation SNP G A CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 STAT3 6774 broad.mit.edu hg19 17 40474448 40474448 + Missense_Mutation SNP A G TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx STAT3 6774 broad.mit.edu hg19 17 40475084 40475084 + Missense_Mutation SNP C G TCGA-G9-6379-01 Unknown Somatic WXS Illumina GAIIx STAT3 6774 broad.mit.edu hg19 17 40485979 40485979 + Missense_Mutation SNP C A TCGA-J4-A83K-01 Unknown Somatic WXS Illumina GAIIx ATP6V0A1 535 broad.mit.edu hg19 17 40665962 40665962 + Missense_Mutation SNP C A PR-03-3125 Unknown Somatic WGS Illumina GAIIx COASY 80347 broad.mit.edu hg19 17 40717505 40717505 + Missense_Mutation SNP G T TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx PLEKHH3 79990 broad.mit.edu hg19 17 40820167 40820167 + Missense_Mutation SNP C A P07-684-Tumor Unknown Somatic WXS Illumina GAIIx CNTNAP1 8506 broad.mit.edu hg19 17 40843884 40843884 + Missense_Mutation SNP G A PR-06-3199 Unknown Somatic WGS Illumina GAIIx EZH1 2145 broad.mit.edu hg19 17 40865284 40865284 + Missense_Mutation SNP T C TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx WNK4 65266 broad.mit.edu hg19 17 40934857 40934857 + Missense_Mutation SNP G A TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx ETV4 2118 broad.mit.edu hg19 17 41611325 41611325 + Missense_Mutation SNP G A TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx G6PC3 92579 broad.mit.edu hg19 17 42152704 42152704 + Missense_Mutation SNP C A TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx HDAC5 10014 broad.mit.edu hg19 17 42169818 42169818 + Missense_Mutation SNP G T P03-1426 Unknown Somatic WGS Illumina GAIIx HDAC5 10014 broad.mit.edu hg19 17 42171103 42171103 + Missense_Mutation SNP C A TCGA-HC-7747-01 Unknown Somatic WXS Illumina GAIIx UBTF 7343 broad.mit.edu hg19 17 42293127 42293127 + Missense_Mutation SNP G A TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx FAM171A2 284069 CPCGene hg19 17 42432499 42432499 + Missense_Mutation SNP G A CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 ITGA2B 3674 broad.mit.edu hg19 17 42458348 42458348 + Missense_Mutation SNP C A TCGA-EJ-7325-01 Unknown Somatic WXS Illumina GAIIx ITGA2B 3674 broad.mit.edu hg19 17 42458366 42458366 + Missense_Mutation SNP C A TCGA-HC-7212-01 Unknown Somatic WXS Illumina GAIIx ITGA2B 3674 CPCGene hg19 17 42460957 42460957 + Missense_Mutation SNP C T CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPATCH8 23131 CPCGene hg19 17 42478741 42478741 + Missense_Mutation SNP G C CPCG0234-F1 Unknown Somatic WXS Illumina HiSeq 2500 FZD2 2535 broad.mit.edu hg19 17 42635479 42635479 + Missense_Mutation SNP C T TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx FZD2 2535 broad.mit.edu hg19 17 42635702 42635702 + Missense_Mutation SNP C G TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx FZD2 2535 broad.mit.edu hg19 17 42636061 42636061 + Missense_Mutation SNP C G TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx FZD2 2535 broad.mit.edu hg19 17 42636173 42636173 + Missense_Mutation SNP C T TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx FZD2 2535 broad.mit.edu hg19 17 42636211 42636211 + Missense_Mutation SNP C T TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx FZD2 2535 broad.mit.edu hg19 17 42636499 42636499 + Missense_Mutation SNP C T TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx C17 0 broad.mit.edu hg19 17 42745581 42745581 + Missense_Mutation SNP T C P05-1657 Unknown Somatic WGS Illumina GAIIx GFAP 2670 broad.mit.edu hg19 17 42989096 42989096 + Missense_Mutation SNP C A TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx PLCD3 113026 broad.mit.edu hg19 17 43209630 43209630 + Missense_Mutation SNP C T TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx MAP3K14 9020 broad.mit.edu hg19 17 43364621 43364621 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx CDC27 996 CPCGene hg19 17 45198345 45198345 + Missense_Mutation SNP C T CPCG0259-F1 Unknown Somatic WXS Illumina HiSeq 2500 EFCAB13 124989 CPCGene hg19 17 45481969 45481969 + Missense_Mutation SNP A C CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 KPNB1 3837 EMBL hg19 17 45755743 45755743 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 OSBPL7 114881 EMBL hg19 17 45885926 45885926 + Missense_Mutation SNP C T EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 CDK5RAP3 80279 broad.mit.edu hg19 17 46048774 46048774 + Splice_Site SNP G T TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx NFE2L1 4779 broad.mit.edu hg19 17 46136011 46136011 + Missense_Mutation SNP G C TCGA-EJ-8470-01 Unknown Somatic WXS Illumina GAIIx SNX11 29916 broad.mit.edu hg19 17 46198816 46198816 + Missense_Mutation SNP A T PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx SKAP1 8631 broad.mit.edu hg19 17 46257419 46257419 + Missense_Mutation SNP G A PR-09-5702-Tumor Unknown Somatic WXS Illumina GAIIx HOXB1 3211 broad.mit.edu hg19 17 46608177 46608177 + Missense_Mutation SNP G T PR-04-3113-Tumor Unknown Somatic WXS Illumina GAIIx HOXB3 3213 broad.mit.edu hg19 17 46627825 46627825 + Missense_Mutation SNP C T TCGA-VN-A88L-01 Unknown Somatic WXS Illumina GAIIx HOXB13 10481 broad.mit.edu hg19 17 46805442 46805442 + Missense_Mutation SNP A C TCGA-G9-6338-01 Unknown Somatic WXS Illumina GAIIx HOXB13 10481 broad.mit.edu hg19 17 46805519 46805519 + Missense_Mutation SNP A G TCGA-EJ-7218-01 Unknown Somatic WXS Illumina GAIIx IGF2BP1 10642 CPCGene hg19 17 47121426 47121426 + Missense_Mutation SNP G A CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF652 22834 CPCGene hg19 17 47390193 47390193 + Missense_Mutation SNP G T CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF652 22834 broad.mit.edu hg19 17 47394309 47394309 + Missense_Mutation SNP A G TCGA-EJ-7321-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696421 47696421 + Missense_Mutation SNP C G PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx SPOP 8405 CPCGene hg19 17 47696424 47696424 + Missense_Mutation SNP G C CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPOP 8405 broad.mit.edu hg19 17 47696424 47696424 + Missense_Mutation SNP G C TCGA-HC-8261-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696424 47696424 + Missense_Mutation SNP G C TCGA-HC-A6AP-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696424 47696424 + Missense_Mutation SNP G C P07-837 Unknown Somatic WGS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696424 47696424 + Missense_Mutation SNP G T PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696425 47696425 + Missense_Mutation SNP A C PR-01-2492-Tumor Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696425 47696425 + Missense_Mutation SNP A C TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696425 47696425 + Missense_Mutation SNP A C TCGA-EJ-5509-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 CPCGene hg19 17 47696425 47696425 + Missense_Mutation SNP A G CPCG0183-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPOP 8405 broad.mit.edu hg19 17 47696425 47696425 + Missense_Mutation SNP A G PR-2761-Tumor Unknown Somatic WXS Illumina GAIIx SPOP 8405 CPCGene hg19 17 47696425 47696425 + Missense_Mutation SNP A G CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPOP 8405 broad.mit.edu hg19 17 47696425 47696425 + Missense_Mutation SNP A G P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696426 47696426 + Missense_Mutation SNP A C PR-0508 Unknown Somatic WGS Illumina GAIIx SPOP 8405 CPCGene hg19 17 47696426 47696426 + Missense_Mutation SNP A C CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPOP 8405 CPCGene hg19 17 47696426 47696426 + Missense_Mutation SNP A C CPCG0413-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPOP 8405 broad.mit.edu hg19 17 47696426 47696426 + Missense_Mutation SNP A C PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx SPOP 8405 CPCGene hg19 17 47696426 47696426 + Missense_Mutation SNP A T CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPOP 8405 broad.mit.edu hg19 17 47696431 47696431 + Missense_Mutation SNP C G TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696432 47696432 + Missense_Mutation SNP A C TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696432 47696432 + Missense_Mutation SNP A C TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696432 47696432 + Missense_Mutation SNP A C TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696432 47696432 + Missense_Mutation SNP A C TCGA-Y6-A8TL-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696435 47696435 + Missense_Mutation SNP C G P08-1541 Unknown Somatic WGS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696438 47696438 + Missense_Mutation SNP T C PR-3051-Tumor Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696448 47696448 + Missense_Mutation SNP A T P07-684-Tumor Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696450 47696450 + Missense_Mutation SNP A T TCGA-VN-A88O-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696637 47696637 + Missense_Mutation SNP A G TCGA-G9-6338-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696643 47696643 + Missense_Mutation SNP A C TCGA-EJ-7123-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696643 47696643 + Missense_Mutation SNP A C PR-3043 Unknown Somatic WGS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696644 47696644 + Missense_Mutation SNP A C TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696644 47696644 + Missense_Mutation SNP A C TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696644 47696644 + Missense_Mutation SNP A C TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 CPCGene hg19 17 47696644 47696644 + Missense_Mutation SNP A T CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPOP 8405 broad.mit.edu hg19 17 47696688 47696688 + Missense_Mutation SNP T C TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696689 47696689 + Missense_Mutation SNP A T TCGA-ZG-A8QX-01 Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696689 47696689 + Missense_Mutation SNP A T PR-05-839-Tumor Unknown Somatic WXS Illumina GAIIx SPOP 8405 broad.mit.edu hg19 17 47696689 47696689 + Missense_Mutation SNP A T PR-2525 Unknown Somatic WGS Illumina GAIIx FLJ45513 729220 CPCGene hg19 17 47924394 47924394 + Missense_Mutation SNP G A CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 PDK2 5164 broad.mit.edu hg19 17 48187424 48187424 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx COL1A1 1277 broad.mit.edu hg19 17 48264184 48264184 + Missense_Mutation SNP C T TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx SPATA20 64847 broad.mit.edu hg19 17 48626419 48626419 + Missense_Mutation SNP G A P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx CACNA1G 8913 broad.mit.edu hg19 17 48649271 48649271 + Missense_Mutation SNP A G PR-04-1243 Unknown Somatic WGS Illumina GAIIx ABCC3 8714 broad.mit.edu hg19 17 48761112 48761112 + Missense_Mutation SNP G C TCGA-HC-7736-01 Unknown Somatic WXS Illumina GAIIx ABCC3 8714 CPCGene hg19 17 48768532 48768532 + Missense_Mutation SNP G C CPCG0353-F1 Unknown Somatic WXS Illumina HiSeq 2500 C17 0 broad.mit.edu hg19 17 51063083 51063083 + Splice_Site SNP T G PR-08-4154 Unknown Somatic WGS Illumina GAIIx KIF2B 84643 broad.mit.edu hg19 17 51900512 51900512 + Missense_Mutation SNP C A PR-0427-Tumor Unknown Somatic WXS Illumina GAIIx HLF 3131 broad.mit.edu hg19 17 53392674 53392674 + Missense_Mutation SNP G C TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx MMD 23531 broad.mit.edu hg19 17 53485128 53485128 + Missense_Mutation SNP A G PR-01-2492-Tumor Unknown Somatic WXS Illumina GAIIx ANKFN1 162282 CPCGene hg19 17 54520212 54520212 + Missense_Mutation SNP G C CPCG0344-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANKFN1 162282 CPCGene hg19 17 54559877 54559877 + Missense_Mutation SNP T C CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 TRIM25 7706 broad.mit.edu hg19 17 54969322 54969322 + Missense_Mutation SNP G A TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx AKAP1 8165 broad.mit.edu hg19 17 55197639 55197639 + Missense_Mutation SNP A G TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx SRSF1 6426 broad.mit.edu hg19 17 56083187 56083187 + Missense_Mutation SNP T C TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx EPX 8288 broad.mit.edu hg19 17 56270404 56270404 + Missense_Mutation SNP C T P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx MKS1 54903 broad.mit.edu hg19 17 56285908 56285908 + Missense_Mutation SNP A C TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx LPO 4025 broad.mit.edu hg19 17 56345181 56345181 + Missense_Mutation SNP C T TCGA-EJ-5522-01 Unknown Somatic WXS Illumina GAIIx BZRAP1 0 CPCGene hg19 17 56396569 56396569 + Missense_Mutation SNP C A CPCG0324-F1 Unknown Somatic WXS Illumina HiSeq 2500 SEPT4 5414 broad.mit.edu hg19 17 56598656 56598656 + Missense_Mutation SNP C T P07-4941 Unknown Somatic WGS Illumina GAIIx CLTC 1213 broad.mit.edu hg19 17 57733350 57733350 + Missense_Mutation SNP G A TCGA-EJ-7785-01 Unknown Somatic WXS Illumina GAIIx RPS6KB1 6198 CPCGene hg19 17 58018239 58018239 + Missense_Mutation SNP C G CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 HEATR6 63897 CPCGene hg19 17 58150629 58150629 + Missense_Mutation SNP C T CPCG0259-F1 Unknown Somatic WXS Illumina HiSeq 2500 USP32 84669 broad.mit.edu hg19 17 58343416 58343416 + Missense_Mutation SNP A G P07-4941 Unknown Somatic WGS Illumina GAIIx INTS2 57508 broad.mit.edu hg19 17 60003895 60003895 + Missense_Mutation SNP A C TCGA-2A-A8VL-01 Unknown Somatic WXS Illumina GAIIx INTS2 57508 CPCGene hg19 17 60003970 60003970 + Missense_Mutation SNP A C CPCG0410-F1 Unknown Somatic WXS Illumina HiSeq 2500 MED13 9969 broad.mit.edu hg19 17 60060259 60060259 + Missense_Mutation SNP T A TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx MED13 9969 broad.mit.edu hg19 17 60062197 60062197 + Missense_Mutation SNP T C TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx MED13 9969 broad.mit.edu hg19 17 60072621 60072621 + Missense_Mutation SNP T C PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx CCDC47 57003 broad.mit.edu hg19 17 61841502 61841502 + Missense_Mutation SNP A C PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx DDX42 11325 CPCGene hg19 17 61877978 61877978 + Splice_Site SNP G T CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 DDX42 11325 CPCGene hg19 17 61890680 61890680 + Missense_Mutation SNP G A CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 GH2 2689 broad.mit.edu hg19 17 61958402 61958402 + Missense_Mutation SNP G A TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx TEX2 55852 CPCGene hg19 17 62238223 62238223 + Missense_Mutation SNP C T CPCG0217-F1 Unknown Somatic WXS Illumina HiSeq 2500 TEX2 55852 broad.mit.edu hg19 17 62290844 62290844 + Missense_Mutation SNP T C PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx CEP95 90799 broad.mit.edu hg19 17 62523329 62523329 + Missense_Mutation SNP T A P07-5037 Unknown Somatic WGS Illumina GAIIx GNA13 10672 broad.mit.edu hg19 17 63049844 63049844 + Missense_Mutation SNP T C TCGA-EJ-8470-01 Unknown Somatic WXS Illumina GAIIx CACNG5 27091 CPCGene hg19 17 64876789 64876789 + Missense_Mutation SNP C A CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 BPTF 2186 broad.mit.edu hg19 17 65890179 65890179 + Missense_Mutation SNP G T P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx BPTF 2186 broad.mit.edu hg19 17 65907564 65907564 + Missense_Mutation SNP C T TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx BPTF 2186 CPCGene hg19 17 65908162 65908162 + Missense_Mutation SNP A G CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAM20A 54757 broad.mit.edu hg19 17 66538198 66538198 + Missense_Mutation SNP G T P08-217 Unknown Somatic WGS Illumina GAIIx SDK2 54549 broad.mit.edu hg19 17 71334988 71334988 + Missense_Mutation SNP G A TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx SDK2 54549 CPCGene hg19 17 71503706 71503706 + Missense_Mutation SNP G A CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPR142 350383 broad.mit.edu hg19 17 72363725 72363725 + Missense_Mutation SNP T C TCGA-VP-A87C-01 Unknown Somatic WXS Illumina GAIIx FADS6 283985 broad.mit.edu hg19 17 72874606 72874606 + Missense_Mutation SNP C G P08-492 Unknown Somatic WGS Illumina GAIIx OTOP2 92736 broad.mit.edu hg19 17 72923357 72923357 + Missense_Mutation SNP G A P04-1421-Tumor Unknown Somatic WXS Illumina GAIIx OTOP2 92736 broad.mit.edu hg19 17 72926528 72926528 + Missense_Mutation SNP T C TCGA-HC-7212-01 Unknown Somatic WXS Illumina GAIIx OTOP2 92736 broad.mit.edu hg19 17 72929568 72929568 + Missense_Mutation SNP C T PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx NUP85 79902 CPCGene hg19 17 73230732 73230732 + Missense_Mutation SNP G T CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC25A19 60386 broad.mit.edu hg19 17 73273534 73273534 + Missense_Mutation SNP C T PR-08-2153 Unknown Somatic WGS Illumina GAIIx KIAA0195 0 EMBL hg19 17 73492387 73492387 + Missense_Mutation SNP A C EOPC-10 Unknown Somatic WGS Illumina HiSeq2000 KIAA0195 0 CPCGene hg19 17 73493241 73493241 + Missense_Mutation SNP C T CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 TSEN54 283989 broad.mit.edu hg19 17 73518111 73518111 + Missense_Mutation SNP G T TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx RECQL5 9400 broad.mit.edu hg19 17 73627271 73627271 + Missense_Mutation SNP C G TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx GALK1 2584 CPCGene hg19 17 73758786 73758786 + Missense_Mutation SNP C T CPCG0387-F1 Unknown Somatic WXS Illumina HiSeq 2500 UNC13D 201294 broad.mit.edu hg19 17 73836863 73836863 + Missense_Mutation SNP C T TCGA-HC-A6AO-01 Unknown Somatic WXS Illumina GAIIx EVPL 2125 broad.mit.edu hg19 17 74011649 74011649 + Missense_Mutation SNP C T PR-07-4610 Unknown Somatic WGS Illumina GAIIx SRP68 6730 broad.mit.edu hg19 17 74042160 74042160 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx GALR2 8811 CPCGene hg19 17 74073145 74073145 + Missense_Mutation SNP T C CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 FOXJ1 2302 CPCGene hg19 17 74136368 74136368 + Missense_Mutation SNP G C CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 FOXJ1 2302 CPCGene hg19 17 74136369 74136369 + Missense_Mutation SNP C T CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 QRICH2 84074 broad.mit.edu hg19 17 74287452 74287452 + Missense_Mutation SNP A T PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx QRICH2 84074 CPCGene hg19 17 74288410 74288410 + Missense_Mutation SNP C T CPCG0183-F1 Unknown Somatic WXS Illumina HiSeq 2500 QRICH2 84074 broad.mit.edu hg19 17 74288410 74288410 + Missense_Mutation SNP C T TCGA-QU-A6IO-01 Unknown Somatic WXS Illumina GAIIx QRICH2 84074 broad.mit.edu hg19 17 74288410 74288410 + Missense_Mutation SNP C T TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx QRICH2 84074 broad.mit.edu hg19 17 74288410 74288410 + Missense_Mutation SNP C T PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx QRICH2 84074 CPCGene hg19 17 74288410 74288410 + Missense_Mutation SNP C T CPCG0001-F1 Unknown Somatic WXS Illumina HiSeq 2500 QRICH2 84074 broad.mit.edu hg19 17 74288410 74288410 + Missense_Mutation SNP C T TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx QRICH2 84074 broad.mit.edu hg19 17 74288410 74288410 + Missense_Mutation SNP C T TCGA-HC-7740-01 Unknown Somatic WGS Illumina GAIIx QRICH2 84074 broad.mit.edu hg19 17 74288410 74288410 + Missense_Mutation SNP C T TCGA-G9-6377-01 Unknown Somatic WXS Illumina GAIIx QRICH2 84074 broad.mit.edu hg19 17 74288410 74288410 + Missense_Mutation SNP C T P06-2325-Tumor Unknown Somatic WXS Illumina GAIIx UBE2O 63893 broad.mit.edu hg19 17 74396560 74396560 + Missense_Mutation SNP G A TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx ST6GALNAC2 10610 broad.mit.edu hg19 17 74562331 74562331 + Missense_Mutation SNP G A TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx METTL23 124512 broad.mit.edu hg19 17 74729679 74729679 + Missense_Mutation SNP G A TCGA-EJ-7314-01 Unknown Somatic WXS Illumina GAIIx MFSD11 79157 broad.mit.edu hg19 17 74763505 74763505 + Missense_Mutation SNP C A P08-1541 Unknown Somatic WGS Illumina GAIIx PGS1 9489 broad.mit.edu hg19 17 76394416 76394416 + Missense_Mutation SNP C T PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx DNAH17 8632 CPCGene hg19 17 76433854 76433854 + Missense_Mutation SNP C T CPCG0124-F1 Unknown Somatic WXS Illumina HiSeq 2500 DNAH17 8632 broad.mit.edu hg19 17 76491068 76491068 + Missense_Mutation SNP G A PR-07-4610 Unknown Somatic WGS Illumina GAIIx USP36 57602 CPCGene hg19 17 76832423 76832423 + Missense_Mutation SNP T C CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 ENGASE 64772 broad.mit.edu hg19 17 77073870 77073870 + Missense_Mutation SNP C T TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx CBX8 57332 broad.mit.edu hg19 17 77768836 77768836 + Missense_Mutation SNP C T TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx TBC1D16 125058 broad.mit.edu hg19 17 77921608 77921608 + Missense_Mutation SNP C T PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx CCDC40 55036 broad.mit.edu hg19 17 78061450 78061450 + Missense_Mutation SNP C G TCGA-VN-A88N-01 Unknown Somatic WXS Illumina GAIIx GAA 2548 broad.mit.edu hg19 17 78079689 78079689 + Missense_Mutation SNP G T TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx SGSH 6448 broad.mit.edu hg19 17 78184458 78184458 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx SLC26A11 284129 broad.mit.edu hg19 17 78199667 78199667 + Missense_Mutation SNP C T PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx SLC26A11 284129 broad.mit.edu hg19 17 78222020 78222020 + Missense_Mutation SNP C T TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx RNF213 57674 broad.mit.edu hg19 17 78320281 78320281 + Missense_Mutation SNP G T P05-3852 Unknown Somatic WGS Illumina GAIIx RNF213 57674 broad.mit.edu hg19 17 78320603 78320603 + Missense_Mutation SNP G A PR-04-194-Tumor Unknown Somatic WXS Illumina GAIIx RNF213 57674 broad.mit.edu hg19 17 78337016 78337016 + Missense_Mutation SNP C T TCGA-VN-A88M-01 Unknown Somatic WXS Illumina GAIIx RNF213 57674 CPCGene hg19 17 78341789 78341789 + Missense_Mutation SNP C G CPCG0246-F1 Unknown Somatic WXS Illumina HiSeq 2500 RNF213 57674 CPCGene hg19 17 78367287 78367287 + Missense_Mutation SNP G A CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 RPTOR 57521 broad.mit.edu hg19 17 78857260 78857260 + Missense_Mutation SNP C T TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx CEP131 22994 broad.mit.edu hg19 17 79173297 79173297 + Missense_Mutation SNP C T PR-05-3595 Unknown Somatic WGS Illumina GAIIx ENTHD2 0 broad.mit.edu hg19 17 79207240 79207240 + Missense_Mutation SNP C A TCGA-EJ-7791-01 Unknown Somatic WGS Illumina GAIIx BAHCC1 57597 broad.mit.edu hg19 17 79409621 79409621 + Missense_Mutation SNP G A TCGA-EJ-5497-01 Unknown Somatic WXS Illumina GAIIx BAHCC1 57597 broad.mit.edu hg19 17 79410002 79410002 + Missense_Mutation SNP C T PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx FSCN2 25794 CPCGene hg19 17 79495941 79495941 + Missense_Mutation SNP C T CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCDC137 339230 CPCGene hg19 17 79634827 79634827 + Missense_Mutation SNP G T CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 GCGR 2642 broad.mit.edu hg19 17 79769656 79769656 + Missense_Mutation SNP T C P05-620 Unknown Somatic WGS Illumina GAIIx FAM195B 0 CPCGene hg19 17 79782173 79782173 + Missense_Mutation SNP G T CPCG0001-F1 Unknown Somatic WXS Illumina HiSeq 2500 PYCR1 5831 CPCGene hg19 17 79892915 79892915 + Missense_Mutation SNP C T CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 NOTUM 147111 broad.mit.edu hg19 17 79914844 79914844 + Missense_Mutation SNP A G TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx LRRC45 201255 broad.mit.edu hg19 17 79988546 79988546 + Missense_Mutation SNP G A TCGA-EJ-7791-01 Unknown Somatic WGS Illumina GAIIx GPS1 2873 broad.mit.edu hg19 17 80010261 80010261 + Missense_Mutation SNP G T P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx GPS1 2873 broad.mit.edu hg19 17 80011240 80011240 + Missense_Mutation SNP C A TCGA-XJ-A9DQ-01 Unknown Somatic WXS Illumina GAIIx FASN 2194 broad.mit.edu hg19 17 80044351 80044351 + Missense_Mutation SNP G A P08-716 Unknown Somatic WGS Illumina GAIIx CCDC57 284001 broad.mit.edu hg19 17 80121090 80121090 + Missense_Mutation SNP G A TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx HEXDC 284004 CPCGene hg19 17 80382286 80382286 + Missense_Mutation SNP G T CPCG0184-F1 Unknown Somatic WXS Illumina HiSeq 2500 HEXDC 284004 CPCGene hg19 17 80400337 80400337 + Missense_Mutation SNP G A CPCG0184-F1 Unknown Somatic WXS Illumina HiSeq 2500 FOXK2 3607 broad.mit.edu hg19 17 80521333 80521333 + Missense_Mutation SNP G A TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx TBCD 6904 broad.mit.edu hg19 17 80739569 80739569 + Missense_Mutation SNP T C TCGA-QU-A6IO-01 Unknown Somatic WXS Illumina GAIIx TBCD 6904 CPCGene hg19 17 80755658 80755658 + Missense_Mutation SNP G A CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF750 79755 EMBL hg19 17 80789105 80789105 + Missense_Mutation SNP G A EOPC-08 Unknown Somatic WGS Illumina HiSeq2000 SMCHD1 23347 broad.mit.edu hg19 18 2656103 2656103 + Missense_Mutation SNP G C TCGA-2A-A8W1-01 Unknown Somatic WXS Illumina GAIIx SMCHD1 23347 broad.mit.edu hg19 18 2694691 2694691 + Missense_Mutation SNP C T TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx MYOM1 8736 broad.mit.edu hg19 18 3135567 3135567 + Missense_Mutation SNP C A TCGA-G9-6377-01 Unknown Somatic WXS Illumina GAIIx TGIF1 7050 CPCGene hg19 18 3457402 3457402 + Missense_Mutation SNP C G CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 TGIF1 7050 broad.mit.edu hg19 18 3457678 3457678 + Missense_Mutation SNP T A PR-02-254-Tumor Unknown Somatic WXS Illumina GAIIx ZBTB14 7541 CPCGene hg19 18 5295811 5295811 + Splice_Site SNP C A CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 EPB41L3 23136 broad.mit.edu hg19 18 5416266 5416266 + Missense_Mutation SNP G T TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx EPB41L3 23136 broad.mit.edu hg19 18 5423443 5423443 + Missense_Mutation SNP G A TCGA-J4-A67S-01 Unknown Somatic WXS Illumina GAIIx EPB41L3 23136 CPCGene hg19 18 5423474 5423474 + Missense_Mutation SNP C T CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 LAMA1 284217 CPCGene hg19 18 6976072 6976072 + Missense_Mutation SNP A C CPCG0213-F1 Unknown Somatic WXS Illumina HiSeq 2500 PTPRM 5797 broad.mit.edu hg19 18 8113637 8113637 + Missense_Mutation SNP C A TCGA-CH-5790-01 Unknown Somatic WXS Illumina GAIIx MTCL1 23255 broad.mit.edu hg19 18 8824820 8824820 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx NDUFV2 4729 CPCGene hg19 18 9134217 9134217 + Missense_Mutation SNP T C CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 NDUFV2 4729 CPCGene hg19 18 9134218 9134218 + Missense_Mutation SNP C T CPCG0213-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANKRD12 23253 broad.mit.edu hg19 18 9256945 9256945 + Missense_Mutation SNP T A PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx TXNDC2 84203 broad.mit.edu hg19 18 9887429 9887429 + Missense_Mutation SNP C T P04-47-Tumor Unknown Somatic WXS Illumina GAIIx NAPG 8774 broad.mit.edu hg19 18 10540386 10540386 + Missense_Mutation SNP C G TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx PIEZO2 63895 broad.mit.edu hg19 18 10763008 10763008 + Missense_Mutation SNP G A P07-5318 Unknown Somatic WGS Illumina GAIIx GNAL 2774 broad.mit.edu hg19 18 11881048 11881048 + Missense_Mutation SNP G A TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx MPPE1 65258 broad.mit.edu hg19 18 11885765 11885765 + Missense_Mutation SNP G A P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx CIDEA 1149 broad.mit.edu hg19 18 12274239 12274239 + Missense_Mutation SNP G A P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx AFG3L2 10939 broad.mit.edu hg19 18 12360038 12360038 + Missense_Mutation SNP A G TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx PTPN2 5771 broad.mit.edu hg19 18 12802000 12802000 + Missense_Mutation SNP T C TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx SEH1L 81929 CPCGene hg19 18 12955467 12955467 + Missense_Mutation SNP T C CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 RNMT 8731 broad.mit.edu hg19 18 13759951 13759951 + Missense_Mutation SNP G C TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx MC2R 4158 broad.mit.edu hg19 18 13885200 13885200 + Missense_Mutation SNP G A TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx ZNF519 162655 broad.mit.edu hg19 18 14105249 14105249 + Missense_Mutation SNP T C PR-02-2072-Tumor Unknown Somatic WXS Illumina GAIIx POTEC 388468 broad.mit.edu hg19 18 14542890 14542890 + Missense_Mutation SNP G C TCGA-EJ-7783-01 Unknown Somatic WXS Illumina GAIIx ANKRD30B 374860 broad.mit.edu hg19 18 14799223 14799223 + Missense_Mutation SNP C T TCGA-G9-7522-01 Unknown Somatic WGS Illumina GAIIx MIB1 57534 CPCGene hg19 18 19321726 19321726 + Missense_Mutation SNP G C CPCG0199-F1 Unknown Somatic WXS Illumina HiSeq 2500 NPC1 4864 broad.mit.edu hg19 18 21134925 21134925 + Missense_Mutation SNP G T TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx NPC1 4864 CPCGene hg19 18 21140294 21140294 + Missense_Mutation SNP G A CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 LAMA3 3909 CPCGene hg19 18 21329501 21329501 + Missense_Mutation SNP A C CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 LAMA3 3909 broad.mit.edu hg19 18 21338370 21338370 + Missense_Mutation SNP G A PR-05-839-Tumor Unknown Somatic WXS Illumina GAIIx LAMA3 3909 broad.mit.edu hg19 18 21426417 21426417 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx HRH4 59340 broad.mit.edu hg19 18 22057444 22057444 + Missense_Mutation SNP G A P08-5852 Unknown Somatic WGS Illumina GAIIx CDH2 1000 broad.mit.edu hg19 18 25565055 25565055 + Missense_Mutation SNP G A P07-5318 Unknown Somatic WGS Illumina GAIIx DSG2 1829 broad.mit.edu hg19 18 29099853 29099853 + Missense_Mutation SNP G A TCGA-G9-6348-01 Unknown Somatic WXS Illumina GAIIx GAREM 0 CPCGene hg19 18 29850242 29850242 + Missense_Mutation SNP C T CPCG0265-F1 Unknown Somatic WXS Illumina HiSeq 2500 NOL4 8715 broad.mit.edu hg19 18 31599413 31599413 + Missense_Mutation SNP T C PR-09-5700-Tumor Unknown Somatic WXS Illumina GAIIx NOL4 8715 broad.mit.edu hg19 18 31802972 31802972 + Missense_Mutation SNP G T TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx KIAA1328 57536 broad.mit.edu hg19 18 34802090 34802090 + Missense_Mutation SNP G T TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx EPG5 57724 broad.mit.edu hg19 18 43481081 43481081 + Missense_Mutation SNP G T P05-620 Unknown Somatic WGS Illumina GAIIx EPG5 57724 broad.mit.edu hg19 18 43497668 43497668 + Missense_Mutation SNP T C TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx EPG5 57724 broad.mit.edu hg19 18 43514917 43514917 + Missense_Mutation SNP C G PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx EPG5 57724 CPCGene hg19 18 43532580 43532580 + Missense_Mutation SNP G C CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATP5A1 498 broad.mit.edu hg19 18 43666432 43666432 + Missense_Mutation SNP T C TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx RNF165 494470 EMBL hg19 18 44015264 44015264 + Missense_Mutation SNP G A EOPC-08 Unknown Somatic WGS Illumina HiSeq2000 LOXHD1 125336 broad.mit.edu hg19 18 44118133 44118133 + Missense_Mutation SNP G A PR-05-3595 Unknown Somatic WGS Illumina GAIIx LOXHD1 125336 CPCGene hg19 18 44146277 44146277 + Missense_Mutation SNP C T CPCG0360-F1 Unknown Somatic WXS Illumina HiSeq 2500 TCEB3B 0 CPCGene hg19 18 44559757 44559757 + Missense_Mutation SNP G T CPCG0342-F1 Unknown Somatic WXS Illumina HiSeq 2500 SKOR2 652991 CPCGene hg19 18 44774981 44774981 + Missense_Mutation SNP G T CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 SMAD2 4087 broad.mit.edu hg19 18 45368305 45368305 + Missense_Mutation SNP T C TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx CTIF 9811 broad.mit.edu hg19 18 46190173 46190173 + Missense_Mutation SNP G T PR-2525 Unknown Somatic WGS Illumina GAIIx DYM 54808 broad.mit.edu hg19 18 46783426 46783426 + Missense_Mutation SNP C T TCGA-FC-A8O0-01 Unknown Somatic WXS Illumina GAIIx LIPG 9388 broad.mit.edu hg19 18 47110059 47110059 + Missense_Mutation SNP C T TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx MBD1 4152 broad.mit.edu hg19 18 47801395 47801395 + Missense_Mutation SNP G A TCGA-ZG-A8QX-01 Unknown Somatic WXS Illumina GAIIx SKA1 220134 broad.mit.edu hg19 18 47906549 47906549 + Missense_Mutation SNP G A TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx MAPK4 5596 broad.mit.edu hg19 18 48248385 48248385 + Missense_Mutation SNP C T P04-47-Tumor Unknown Somatic WXS Illumina GAIIx SMAD4 4089 broad.mit.edu hg19 18 48591894 48591894 + Missense_Mutation SNP T A TCGA-EJ-7315-01 Unknown Somatic WXS Illumina GAIIx SMAD4 4089 broad.mit.edu hg19 18 48604655 48604655 + Missense_Mutation SNP G A TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx DCC 1630 broad.mit.edu hg19 18 50432638 50432638 + Missense_Mutation SNP T A TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx TCF4 6925 broad.mit.edu hg19 18 52901781 52901781 + Missense_Mutation SNP C T TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx TXNL1 9352 broad.mit.edu hg19 18 54278306 54278306 + Missense_Mutation SNP C T TCGA-EJ-7783-01 Unknown Somatic WXS Illumina GAIIx NEDD4L 23327 broad.mit.edu hg19 18 55833067 55833067 + Missense_Mutation SNP C T PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx ZNF532 55205 broad.mit.edu hg19 18 56585911 56585911 + Missense_Mutation SNP C T TCGA-HC-7748-01 Unknown Somatic WXS Illumina GAIIx LMAN1 3998 broad.mit.edu hg19 18 57020490 57020490 + Missense_Mutation SNP G T TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx CCBE1 147372 broad.mit.edu hg19 18 57133976 57133976 + Missense_Mutation SNP T C TCGA-VN-A88N-01 Unknown Somatic WXS Illumina GAIIx RNF152 220441 CPCGene hg19 18 59483354 59483354 + Missense_Mutation SNP C A CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 RNF152 220441 broad.mit.edu hg19 18 59483632 59483632 + Missense_Mutation SNP C T P08-1042 Unknown Somatic WGS Illumina GAIIx SERPINB5 5268 broad.mit.edu hg19 18 61160285 61160285 + Missense_Mutation SNP T C TCGA-G9-6379-01 Unknown Somatic WXS Illumina GAIIx SERPINB8 5271 broad.mit.edu hg19 18 61652428 61652428 + Missense_Mutation SNP G C TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx CDH7 1005 broad.mit.edu hg19 18 63481788 63481788 + Missense_Mutation SNP G T P07-144 Unknown Somatic WGS Illumina GAIIx DSEL 92126 CPCGene hg19 18 65180960 65180960 + Missense_Mutation SNP G A CPCG0259-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMX3 54495 CPCGene hg19 18 66346705 66346705 + Missense_Mutation SNP T C CPCG0372-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCDC102B 79839 CPCGene hg19 18 66504143 66504143 + Missense_Mutation SNP G T CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 SOCS6 9306 broad.mit.edu hg19 18 67991955 67991955 + Missense_Mutation SNP A T PR-STID0000003127 Unknown Somatic WGS Illumina GAIIx NETO1 81832 broad.mit.edu hg19 18 70423359 70423359 + Missense_Mutation SNP A C TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx NETO1 81832 broad.mit.edu hg19 18 70461632 70461632 + Missense_Mutation SNP G A PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx ZNF407 55628 broad.mit.edu hg19 18 72343683 72343683 + Missense_Mutation SNP A T TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx ZNF516 9658 broad.mit.edu hg19 18 74082495 74082495 + Missense_Mutation SNP G A PR-03-1026-Tumor Unknown Somatic WXS Illumina GAIIx ZNF516 9658 broad.mit.edu hg19 18 74091047 74091047 + Missense_Mutation SNP T A TCGA-EJ-5527-01 Unknown Somatic WXS Illumina GAIIx ZNF236 7776 broad.mit.edu hg19 18 74622084 74622084 + Missense_Mutation SNP G A P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx SALL3 27164 CPCGene hg19 18 76755180 76755180 + Missense_Mutation SNP G A CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 NFATC1 4772 broad.mit.edu hg19 18 77208864 77208864 + Missense_Mutation SNP C G TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx NFATC1 4772 CPCGene hg19 18 77211805 77211805 + Missense_Mutation SNP A G CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 CTDP1 9150 CPCGene hg19 18 77496385 77496385 + Missense_Mutation SNP G A CPCG0184-F1 Unknown Somatic WXS Illumina HiSeq 2500 KCNG2 26251 broad.mit.edu hg19 18 77623801 77623801 + Missense_Mutation SNP G A PR-05-3595 Unknown Somatic WGS Illumina GAIIx MIER2 54531 broad.mit.edu hg19 19 313510 313510 + Missense_Mutation SNP G A P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx CDC34 997 broad.mit.edu hg19 19 536284 536284 + Missense_Mutation SNP C T P08-1541 Unknown Somatic WGS Illumina GAIIx POLRMT 5442 CPCGene hg19 19 618715 618715 + Missense_Mutation SNP C A CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 POLRMT 5442 broad.mit.edu hg19 19 621235 621235 + Missense_Mutation SNP C T PR-05-3595 Unknown Somatic WGS Illumina GAIIx FSTL3 10272 CPCGene hg19 19 680423 680423 + Missense_Mutation SNP G C CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 PALM 5064 broad.mit.edu hg19 19 726159 726159 + Missense_Mutation SNP G A TCGA-J4-A67N-01 Unknown Somatic WXS Illumina GAIIx ARID3A 1820 broad.mit.edu hg19 19 966624 966624 + Missense_Mutation SNP G A P05-1657 Unknown Somatic WGS Illumina GAIIx GRIN3B 116444 broad.mit.edu hg19 19 1008631 1008631 + Missense_Mutation SNP C T P07-5037 Unknown Somatic WGS Illumina GAIIx SBNO2 22904 CPCGene hg19 19 1111516 1111516 + Missense_Mutation SNP G C CPCG0232-F1 Unknown Somatic WXS Illumina HiSeq 2500 MIDN 90007 broad.mit.edu hg19 19 1251863 1251863 + Missense_Mutation SNP C G P07-144 Unknown Somatic WGS Illumina GAIIx MIDN 90007 CPCGene hg19 19 1255637 1255637 + Missense_Mutation SNP C G CPCG0380-F1 Unknown Somatic WXS Illumina HiSeq 2500 MUM1 84939 CPCGene hg19 19 1362350 1362350 + Missense_Mutation SNP G A CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 RPS15 6209 CPCGene hg19 19 1440059 1440059 + Missense_Mutation SNP G C CPCG0334-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCSK4 54760 CPCGene hg19 19 1487615 1487615 + Missense_Mutation SNP G T CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAMTSL5 339366 broad.mit.edu hg19 19 1506177 1506177 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx ADAMTSL5 339366 CPCGene hg19 19 1510647 1510647 + Missense_Mutation SNP C A CPCG0124-F1 Unknown Somatic WXS Illumina HiSeq 2500 MBD3 53615 CPCGene hg19 19 1581269 1581269 + Splice_Site SNP C T CPCG0210-F1 Unknown Somatic WXS Illumina HiSeq 2500 TCF3 6929 broad.mit.edu hg19 19 1615477 1615477 + Missense_Mutation SNP C T TCGA-HC-7747-01 Unknown Somatic WXS Illumina GAIIx TCF3 6929 CPCGene hg19 19 1622395 1622395 + Missense_Mutation SNP C T CPCG0412-F1 Unknown Somatic WXS Illumina HiSeq 2500 IZUMO4 113177 CPCGene hg19 19 2098053 2098053 + Missense_Mutation SNP A G CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPPL2B 56928 broad.mit.edu hg19 19 2345262 2345262 + Missense_Mutation SNP G C TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx TIMM13 26517 CPCGene hg19 19 2427489 2427489 + Missense_Mutation SNP C A CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 GADD45B 4616 CPCGene hg19 19 2477044 2477044 + Missense_Mutation SNP T G CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF57 126295 broad.mit.edu hg19 19 2917519 2917519 + Missense_Mutation SNP G C PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx TLE2 7089 broad.mit.edu hg19 19 3005796 3005796 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx CELF5 60680 CPCGene hg19 19 3251059 3251059 + Missense_Mutation SNP G T CPCG0410-F1 Unknown Somatic WXS Illumina HiSeq 2500 TBXA2R 6915 broad.mit.edu hg19 19 3600542 3600542 + Missense_Mutation SNP C T TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx PIP5K1C 23396 broad.mit.edu hg19 19 3641788 3641788 + Missense_Mutation SNP C T TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx PIP5K1C 23396 broad.mit.edu hg19 19 3653333 3653333 + Missense_Mutation SNP G A TCGA-ZG-A8QX-01 Unknown Somatic WXS Illumina GAIIx MRPL54 116541 broad.mit.edu hg19 19 3762707 3762707 + Missense_Mutation SNP C G TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx ZBTB7A 51341 broad.mit.edu hg19 19 4054211 4054211 + Missense_Mutation SNP C A TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx CREB3L3 84699 CPCGene hg19 19 4171665 4171665 + Missense_Mutation SNP C T CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 EBI3 10148 broad.mit.edu hg19 19 4231190 4231190 + Missense_Mutation SNP C T TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx STAP2 55620 broad.mit.edu hg19 19 4333711 4333711 + Missense_Mutation SNP C T PR-1701 Unknown Somatic WGS Illumina GAIIx CHAF1A 10036 broad.mit.edu hg19 19 4409410 4409410 + Missense_Mutation SNP G A TCGA-HC-8259-01 Unknown Somatic WXS Illumina GAIIx CHAF1A 10036 broad.mit.edu hg19 19 4442949 4442949 + Missense_Mutation SNP C T TCGA-G9-6364-01 Unknown Somatic WXS Illumina GAIIx UBXN6 80700 CPCGene hg19 19 4447595 4447595 + Missense_Mutation SNP G A CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 HDGFRP2 84717 CPCGene hg19 19 4488678 4488678 + Missense_Mutation SNP G T CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 PLIN4 729359 broad.mit.edu hg19 19 4512890 4512890 + Missense_Mutation SNP G A TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx LRG1 116844 CPCGene hg19 19 4538658 4538658 + Missense_Mutation SNP C T CPCG0334-F1 Unknown Somatic WXS Illumina HiSeq 2500 SEMA6B 10501 broad.mit.edu hg19 19 4552596 4552596 + Missense_Mutation SNP C T PR-2621 Unknown Somatic WGS Illumina GAIIx DPP9 91039 CPCGene hg19 19 4684751 4684751 + Missense_Mutation SNP T A CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 FEM1A 55527 CPCGene hg19 19 4792784 4792784 + Missense_Mutation SNP T A CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARRDC5 645432 broad.mit.edu hg19 19 4891081 4891081 + Missense_Mutation SNP C T TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx PTPRS 5802 broad.mit.edu hg19 19 5231547 5231547 + Missense_Mutation SNP C T P07-837 Unknown Somatic WGS Illumina GAIIx PTPRS 5802 CPCGene hg19 19 5239002 5239002 + Missense_Mutation SNP G A CPCG0205-F1 Unknown Somatic WXS Illumina HiSeq 2500 HSD11B1L 374875 broad.mit.edu hg19 19 5686445 5686445 + Missense_Mutation SNP A G P08-1541 Unknown Somatic WGS Illumina GAIIx CATSPERD 257062 broad.mit.edu hg19 19 5768180 5768180 + Missense_Mutation SNP A C TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx DUS3L 56931 broad.mit.edu hg19 19 5790154 5790154 + Missense_Mutation SNP T C TCGA-J4-A83M-01 Unknown Somatic WXS Illumina GAIIx RFX2 5990 broad.mit.edu hg19 19 6008197 6008197 + Missense_Mutation SNP G T P08-492 Unknown Somatic WGS Illumina GAIIx ACSBG2 81616 broad.mit.edu hg19 19 6183206 6183206 + Missense_Mutation SNP T C PR-3051-Tumor Unknown Somatic WXS Illumina GAIIx ACSBG2 81616 broad.mit.edu hg19 19 6183207 6183207 + Missense_Mutation SNP A G PR-3051-Tumor Unknown Somatic WXS Illumina GAIIx GPR108 56927 broad.mit.edu hg19 19 6734270 6734270 + Missense_Mutation SNP G A TCGA-HC-A6AO-01 Unknown Somatic WXS Illumina GAIIx TRIP10 9322 broad.mit.edu hg19 19 6743805 6743805 + Missense_Mutation SNP C T TCGA-EJ-7792-01 Unknown Somatic WXS Illumina GAIIx SH2D3A 10045 CPCGene hg19 19 6755248 6755248 + Missense_Mutation SNP C T CPCG0121-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARHGEF18 23370 broad.mit.edu hg19 19 7509217 7509217 + Missense_Mutation SNP C T PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx ARHGEF18 23370 broad.mit.edu hg19 19 7518481 7518481 + Missense_Mutation SNP G T PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx ARHGEF18 23370 broad.mit.edu hg19 19 7535101 7535101 + Missense_Mutation SNP G A TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx MCOLN1 57192 broad.mit.edu hg19 19 7592509 7592509 + Missense_Mutation SNP C A P05-1657 Unknown Somatic WGS Illumina GAIIx PNPLA6 10908 broad.mit.edu hg19 19 7624001 7624001 + Missense_Mutation SNP C G TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx LRRC8E 80131 broad.mit.edu hg19 19 7963879 7963879 + Missense_Mutation SNP G A P08-501 Unknown Somatic WGS Illumina GAIIx FBN3 84467 broad.mit.edu hg19 19 8130923 8130923 + Missense_Mutation SNP A C TCGA-M7-A721-01 Unknown Somatic WXS Illumina GAIIx FBN3 84467 broad.mit.edu hg19 19 8140171 8140171 + Missense_Mutation SNP A C TCGA-G9-6338-01 Unknown Somatic WXS Illumina GAIIx FBN3 84467 CPCGene hg19 19 8160285 8160285 + Missense_Mutation SNP A C CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 FBN3 84467 broad.mit.edu hg19 19 8188379 8188379 + Missense_Mutation SNP G A TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx FBN3 84467 broad.mit.edu hg19 19 8190851 8190851 + Missense_Mutation SNP C T TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx NDUFA7 4701 CPCGene hg19 19 8386228 8386228 + Missense_Mutation SNP G A CPCG0183-F1 Unknown Somatic WXS Illumina HiSeq 2500 MYO1F 4542 broad.mit.edu hg19 19 8604860 8604860 + Missense_Mutation SNP G A TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx ADAMTS10 81794 CPCGene hg19 19 8649879 8649879 + Missense_Mutation SNP C T CPCG0256-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAMTS10 81794 CPCGene hg19 19 8650126 8650126 + Missense_Mutation SNP C T CPCG0255-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAMTS10 81794 broad.mit.edu hg19 19 8654464 8654464 + Missense_Mutation SNP C T P07-5318 Unknown Somatic WGS Illumina GAIIx ADAMTS10 81794 broad.mit.edu hg19 19 8660718 8660718 + Missense_Mutation SNP C T P08-501 Unknown Somatic WGS Illumina GAIIx ACTL9 284382 broad.mit.edu hg19 19 8807879 8807879 + Missense_Mutation SNP G A P04-594-Tumor Unknown Somatic WXS Illumina GAIIx MUC16 94025 broad.mit.edu hg19 19 8959627 8959627 + Missense_Mutation SNP T C PR-3051-Tumor Unknown Somatic WXS Illumina GAIIx MUC16 94025 broad.mit.edu hg19 19 8959691 8959691 + Missense_Mutation SNP G A TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx MUC16 94025 broad.mit.edu hg19 19 9014619 9014619 + Missense_Mutation SNP G C TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx MUC16 94025 broad.mit.edu hg19 19 9047100 9047100 + Missense_Mutation SNP G A TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx MUC16 94025 broad.mit.edu hg19 19 9057080 9057080 + Missense_Mutation SNP G T TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx MUC16 94025 broad.mit.edu hg19 19 9060819 9060819 + Missense_Mutation SNP C G PR-03-3125 Unknown Somatic WGS Illumina GAIIx MUC16 94025 broad.mit.edu hg19 19 9061392 9061392 + Missense_Mutation SNP G C TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx MUC16 94025 CPCGene hg19 19 9062077 9062077 + Missense_Mutation SNP T A CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 MUC16 94025 CPCGene hg19 19 9062116 9062116 + Missense_Mutation SNP C G CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 MUC16 94025 broad.mit.edu hg19 19 9064360 9064360 + Missense_Mutation SNP C T TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx MUC16 94025 broad.mit.edu hg19 19 9069310 9069310 + Missense_Mutation SNP A G TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx MUC16 94025 broad.mit.edu hg19 19 9071835 9071835 + Missense_Mutation SNP G A P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx MUC16 94025 broad.mit.edu hg19 19 9074563 9074563 + Missense_Mutation SNP C T TCGA-J4-A83K-01 Unknown Somatic WXS Illumina GAIIx MUC16 94025 EMBL hg19 19 9075258 9075258 + Missense_Mutation SNP G T EOPC-08 Unknown Somatic WGS Illumina HiSeq2000 MUC16 94025 CPCGene hg19 19 9082836 9082836 + Missense_Mutation SNP A C CPCG0047-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF317 57693 broad.mit.edu hg19 19 9271565 9271565 + Missense_Mutation SNP A G TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx ZNF121 7675 broad.mit.edu hg19 19 9677436 9677436 + Missense_Mutation SNP T G P04-594-Tumor Unknown Somatic WXS Illumina GAIIx ZNF561 93134 CPCGene hg19 19 9721762 9721762 + Missense_Mutation SNP T C CPCG0353-F1 Unknown Somatic WXS Illumina HiSeq 2500 OLFM2 93145 broad.mit.edu hg19 19 9965341 9965341 + Missense_Mutation SNP G A PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx COL5A3 50509 broad.mit.edu hg19 19 10096993 10096993 + Missense_Mutation SNP T A TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx COL5A3 50509 CPCGene hg19 19 10097067 10097067 + Missense_Mutation SNP T C CPCG0057-F1 Unknown Somatic WXS Illumina HiSeq 2500 COL5A3 50509 CPCGene hg19 19 10116382 10116382 + Missense_Mutation SNP C T CPCG0154-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANGPTL6 83854 broad.mit.edu hg19 19 10203390 10203390 + Missense_Mutation SNP C T TCGA-EJ-7315-01 Unknown Somatic WXS Illumina GAIIx ANGPTL6 83854 CPCGene hg19 19 10207104 10207104 + Missense_Mutation SNP C T CPCG0269-F1 Unknown Somatic WXS Illumina HiSeq 2500 DNMT1 1786 broad.mit.edu hg19 19 10265299 10265299 + Missense_Mutation SNP C T TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx ICAM4 3386 CPCGene hg19 19 10397952 10397952 + Missense_Mutation SNP C T CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 ICAM5 7087 broad.mit.edu hg19 19 10404518 10404518 + Missense_Mutation SNP A C TCGA-G9-6342-01 Unknown Somatic WXS Illumina GAIIx RAVER1 125950 CPCGene hg19 19 10441170 10441170 + Missense_Mutation SNP G C CPCG0057-F1 Unknown Somatic WXS Illumina HiSeq 2500 TYK2 7297 broad.mit.edu hg19 19 10468472 10468472 + Missense_Mutation SNP C A TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx TYK2 7297 broad.mit.edu hg19 19 10476498 10476498 + Missense_Mutation SNP T C P09-2497-Tumor Unknown Somatic WXS Illumina GAIIx KRI1 65095 broad.mit.edu hg19 19 10670558 10670558 + Missense_Mutation SNP C T TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx QTRT1 81890 broad.mit.edu hg19 19 10812880 10812880 + Missense_Mutation SNP A G TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx KANK2 25959 broad.mit.edu hg19 19 11304613 11304613 + Missense_Mutation SNP T C TCGA-EJ-7781-01 Unknown Somatic WXS Illumina GAIIx LPPR2 0 broad.mit.edu hg19 19 11472140 11472140 + Missense_Mutation SNP C T TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx PRKCSH 5589 broad.mit.edu hg19 19 11552168 11552168 + Missense_Mutation SNP A G TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx ACP5 54 broad.mit.edu hg19 19 11687381 11687381 + Missense_Mutation SNP G A TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx ZNF433 163059 broad.mit.edu hg19 19 12126896 12126896 + Missense_Mutation SNP T C TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx ZNF878 729747 broad.mit.edu hg19 19 12154779 12154779 + Missense_Mutation SNP A T P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx ZNF20 7568 CPCGene hg19 19 12244635 12244635 + Missense_Mutation SNP C T CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF799 90576 broad.mit.edu hg19 19 12501342 12501342 + Missense_Mutation SNP T C P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx ZNF490 57474 broad.mit.edu hg19 19 12691314 12691314 + Missense_Mutation SNP A T PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx FBXW9 84261 broad.mit.edu hg19 19 12800080 12800080 + Missense_Mutation SNP C A P05-3852 Unknown Somatic WGS Illumina GAIIx C19 0 CPCGene hg19 19 12845143 12845143 + Missense_Mutation SNP C T CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 JUNB 3726 CPCGene hg19 19 12902795 12902795 + Missense_Mutation SNP T C CPCG0241-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAST1 22983 broad.mit.edu hg19 19 12958247 12958247 + Missense_Mutation SNP C G P04-1084 Unknown Somatic WGS Illumina GAIIx DNASE2 1777 CPCGene hg19 19 12991873 12991873 + Missense_Mutation SNP G A CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 GADD45GIP1 90480 broad.mit.edu hg19 19 13065228 13065228 + Missense_Mutation SNP G C P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx CACNA1A 773 broad.mit.edu hg19 19 13372344 13372344 + Missense_Mutation SNP G A PR-09-2744-Tumor Unknown Somatic WXS Illumina GAIIx CACNA1A 773 CPCGene hg19 19 13397687 13397687 + Missense_Mutation SNP C T CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 CACNA1A 773 broad.mit.edu hg19 19 13616783 13616783 + Missense_Mutation SNP C T TCGA-HC-7817-01 Unknown Somatic WXS Illumina GAIIx RFX1 5989 broad.mit.edu hg19 19 14083867 14083867 + Missense_Mutation SNP G A TCGA-QU-A6IP-01 Unknown Somatic WXS Illumina GAIIx IL27RA 9466 broad.mit.edu hg19 19 14162942 14162942 + Missense_Mutation SNP C T TCGA-J4-A67K-01 Unknown Somatic WXS Illumina GAIIx TECR 9524 CPCGene hg19 19 14674812 14674812 + Missense_Mutation SNP G A CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 EMR3 0 broad.mit.edu hg19 19 14774336 14774336 + Missense_Mutation SNP G A TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx OR7C2 26658 CPCGene hg19 19 15052824 15052824 + Missense_Mutation SNP C T CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 NOTCH3 4854 broad.mit.edu hg19 19 15276765 15276765 + Missense_Mutation SNP G A TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx NOTCH3 4854 broad.mit.edu hg19 19 15278212 15278212 + Missense_Mutation SNP G A TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx EPHX3 79852 broad.mit.edu hg19 19 15338333 15338333 + Missense_Mutation SNP G T TCGA-HC-7748-01 Unknown Somatic WXS Illumina GAIIx CYP4F3 4051 broad.mit.edu hg19 19 15756624 15756624 + Missense_Mutation SNP C A TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx CYP4F12 66002 broad.mit.edu hg19 19 15791307 15791307 + Missense_Mutation SNP A C TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx RAB8A 4218 broad.mit.edu hg19 19 16222776 16222776 + Missense_Mutation SNP C T PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx C19 0 CPCGene hg19 19 16612047 16612047 + Missense_Mutation SNP C G CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 C19 0 broad.mit.edu hg19 19 16620545 16620545 + Missense_Mutation SNP A G TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx NWD1 284434 broad.mit.edu hg19 19 16861005 16861005 + Missense_Mutation SNP G C TCGA-EJ-7791-01 Unknown Somatic WGS Illumina GAIIx NWD1 284434 broad.mit.edu hg19 19 16872810 16872810 + Missense_Mutation SNP G A TCGA-HC-8259-01 Unknown Somatic WXS Illumina GAIIx SIN3B 23309 CPCGene hg19 19 16977210 16977210 + Missense_Mutation SNP G A CPCG0358-F1 Unknown Somatic WXS Illumina HiSeq 2500 CPAMD8 27151 broad.mit.edu hg19 19 17081776 17081776 + Missense_Mutation SNP G T TCGA-EJ-7321-01 Unknown Somatic WXS Illumina GAIIx MYO9B 4650 broad.mit.edu hg19 19 17212652 17212652 + Missense_Mutation SNP G T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx MYO9B 4650 CPCGene hg19 19 17283622 17283622 + Missense_Mutation SNP C T CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 MYO9B 4650 broad.mit.edu hg19 19 17283709 17283709 + Missense_Mutation SNP C T PR-06-1749 Unknown Somatic WGS Illumina GAIIx USHBP1 83878 CPCGene hg19 19 17366331 17366331 + Missense_Mutation SNP C A CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 USHBP1 83878 broad.mit.edu hg19 19 17370705 17370705 + Splice_Site SNP C T TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx PLVAP 83483 broad.mit.edu hg19 19 17487978 17487978 + Missense_Mutation SNP G C TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx BST2 684 broad.mit.edu hg19 19 17514964 17514964 + Missense_Mutation SNP G A PR-00-1823-Tumor Unknown Somatic WXS Illumina GAIIx UNC13A 23025 CPCGene hg19 19 17750285 17750285 + Missense_Mutation SNP G A CPCG0123-F1 Unknown Somatic WXS Illumina HiSeq 2500 UNC13A 23025 broad.mit.edu hg19 19 17766893 17766893 + Missense_Mutation SNP C T P04-1084 Unknown Somatic WGS Illumina GAIIx FCHO1 23149 CPCGene hg19 19 17875195 17875195 + Missense_Mutation SNP A G CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC5A5 6528 broad.mit.edu hg19 19 17993012 17993012 + Missense_Mutation SNP G A TCGA-VN-A88M-01 Unknown Somatic WXS Illumina GAIIx SLC5A5 6528 broad.mit.edu hg19 19 18001748 18001748 + Missense_Mutation SNP C T TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx CCDC124 115098 CPCGene hg19 19 18054398 18054398 + Missense_Mutation SNP G A CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 KCNN1 3780 broad.mit.edu hg19 19 18085010 18085010 + Missense_Mutation SNP C T TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx KCNN1 3780 broad.mit.edu hg19 19 18092575 18092575 + Missense_Mutation SNP G A TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx KCNN1 3780 CPCGene hg19 19 18096137 18096137 + Missense_Mutation SNP G A CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAST3 23031 CPCGene hg19 19 18249892 18249892 + Missense_Mutation SNP A G CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 IFI30 10437 broad.mit.edu hg19 19 18285887 18285887 + Missense_Mutation SNP C A TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx KIAA1683 80726 CPCGene hg19 19 18368430 18368430 + Missense_Mutation SNP G A CPCG0205-F1 Unknown Somatic WXS Illumina HiSeq 2500 JUND 3727 broad.mit.edu hg19 19 18391297 18391297 + Missense_Mutation SNP T C TCGA-G9-6348-01 Unknown Somatic WXS Illumina GAIIx GDF15 9518 broad.mit.edu hg19 19 18499536 18499536 + Missense_Mutation SNP T G P03-871-Tumor Unknown Somatic WXS Illumina GAIIx GDF15 9518 broad.mit.edu hg19 19 18499683 18499683 + Missense_Mutation SNP G A PR-04-1243 Unknown Somatic WGS Illumina GAIIx KLHL26 55295 broad.mit.edu hg19 19 18747936 18747936 + Missense_Mutation SNP G A P04-1084 Unknown Somatic WGS Illumina GAIIx KLHL26 55295 broad.mit.edu hg19 19 18775251 18775251 + Missense_Mutation SNP C G P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx CRTC1 23373 broad.mit.edu hg19 19 18856727 18856727 + Missense_Mutation SNP C T TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx UPF1 5976 CPCGene hg19 19 18974295 18974295 + Missense_Mutation SNP G A CPCG0057-F1 Unknown Somatic WXS Illumina HiSeq 2500 RFXANK 8625 broad.mit.edu hg19 19 19309477 19309477 + Missense_Mutation SNP G A TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx NCAN 1463 broad.mit.edu hg19 19 19334901 19334901 + Missense_Mutation SNP C T P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx NCAN 1463 CPCGene hg19 19 19335827 19335827 + Missense_Mutation SNP G A CPCG0048-F1 Unknown Somatic WXS Illumina HiSeq 2500 NCAN 1463 broad.mit.edu hg19 19 19337625 19337625 + Missense_Mutation SNP C T TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx NCAN 1463 broad.mit.edu hg19 19 19359670 19359670 + Missense_Mutation SNP C T PR-2621 Unknown Somatic WGS Illumina GAIIx MAU2 23383 CPCGene hg19 19 19431827 19431827 + Missense_Mutation SNP C T CPCG0259-F1 Unknown Somatic WXS Illumina HiSeq 2500 YJEFN3 374887 broad.mit.edu hg19 19 19645880 19645880 + Missense_Mutation SNP C T TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx CILP2 148113 broad.mit.edu hg19 19 19655488 19655488 + Missense_Mutation SNP C T PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx ZNF101 94039 broad.mit.edu hg19 19 19790184 19790184 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx ZNF14 7561 broad.mit.edu hg19 19 19822811 19822811 + Missense_Mutation SNP T C PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx ZNF43 7594 broad.mit.edu hg19 19 22001955 22001955 + Missense_Mutation SNP T G TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx ZNF208 7757 broad.mit.edu hg19 19 22154886 22154886 + Missense_Mutation SNP T G PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx ZNF98 148198 broad.mit.edu hg19 19 22575729 22575729 + Missense_Mutation SNP T A TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx ZNF99 7652 broad.mit.edu hg19 19 22951198 22951198 + Missense_Mutation SNP G A TCGA-J4-A67K-01 Unknown Somatic WXS Illumina GAIIx ZNF728 388523 CPCGene hg19 19 23159298 23159298 + Missense_Mutation SNP C A CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF675 171392 broad.mit.edu hg19 19 23837046 23837046 + Missense_Mutation SNP C T TCGA-G9-6329-01 Unknown Somatic WXS Illumina GAIIx TSHZ3 57616 CPCGene hg19 19 31767506 31767506 + Missense_Mutation SNP C T CPCG0334-F1 Unknown Somatic WXS Illumina HiSeq 2500 TSHZ3 57616 broad.mit.edu hg19 19 31768863 31768863 + Missense_Mutation SNP C G P07-684-Tumor Unknown Somatic WXS Illumina GAIIx PDCD5 9141 broad.mit.edu hg19 19 33077770 33077770 + Missense_Mutation SNP G C TCGA-EJ-8470-01 Unknown Somatic WXS Illumina GAIIx RHPN2 85415 broad.mit.edu hg19 19 33493793 33493793 + Missense_Mutation SNP A G P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx GPATCH1 55094 broad.mit.edu hg19 19 33584366 33584366 + Missense_Mutation SNP C T TCGA-CH-5790-01 Unknown Somatic WXS Illumina GAIIx CHST8 64377 broad.mit.edu hg19 19 34180279 34180279 + Missense_Mutation SNP G A TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx GRAMD1A 57655 broad.mit.edu hg19 19 35512685 35512685 + Missense_Mutation SNP G A P03-871-Tumor Unknown Somatic WXS Illumina GAIIx FXYD3 5349 broad.mit.edu hg19 19 35612139 35612139 + Missense_Mutation SNP T G PR-09-5702-Tumor Unknown Somatic WXS Illumina GAIIx LGI4 163175 broad.mit.edu hg19 19 35616339 35616339 + Missense_Mutation SNP G T PR-STID0000003127 Unknown Somatic WGS Illumina GAIIx FXYD5 53827 CPCGene hg19 19 35655081 35655081 + Missense_Mutation SNP G A CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 FXYD5 53827 CPCGene hg19 19 35657046 35657046 + Missense_Mutation SNP T C CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAM187B 148109 broad.mit.edu hg19 19 35718888 35718888 + Missense_Mutation SNP G A TCGA-EJ-7783-01 Unknown Somatic WXS Illumina GAIIx FAM187B 148109 CPCGene hg19 19 35719110 35719110 + Missense_Mutation SNP G T CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 LSR 51599 broad.mit.edu hg19 19 35757262 35757262 + Missense_Mutation SNP T C TCGA-HC-7748-01 Unknown Somatic WXS Illumina GAIIx DMKN 93099 CPCGene hg19 19 36002393 36002393 + Missense_Mutation SNP C T CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 KMT2B 9757 broad.mit.edu hg19 19 36213293 36213293 + Missense_Mutation SNP C T PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx U2AF1L4 199746 broad.mit.edu hg19 19 36234735 36234735 + Missense_Mutation SNP G A TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx ARHGAP33 115703 broad.mit.edu hg19 19 36275140 36275140 + Missense_Mutation SNP G A TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx PRODH2 58510 broad.mit.edu hg19 19 36303360 36303360 + Missense_Mutation SNP C A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx PRODH2 58510 broad.mit.edu hg19 19 36304178 36304178 + Missense_Mutation SNP C T PR-04-1243 Unknown Somatic WGS Illumina GAIIx NPHS1 4868 CPCGene hg19 19 36333084 36333084 + Missense_Mutation SNP G T CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 APLP1 333 broad.mit.edu hg19 19 36363502 36363502 + Missense_Mutation SNP G A P07-4941 Unknown Somatic WGS Illumina GAIIx LRFN3 79414 CPCGene hg19 19 36431112 36431112 + Missense_Mutation SNP G A CPCG0232-F1 Unknown Somatic WXS Illumina HiSeq 2500 LRFN3 79414 EMBL hg19 19 36431181 36431181 + Missense_Mutation SNP C T EOPC-04 Unknown Somatic WGS Illumina HiSeq2000 LRFN3 79414 broad.mit.edu hg19 19 36431457 36431457 + Missense_Mutation SNP C G TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx WDR62 284403 broad.mit.edu hg19 19 36577641 36577641 + Missense_Mutation SNP C T P07-837 Unknown Somatic WGS Illumina GAIIx CAPNS1 826 broad.mit.edu hg19 19 36636739 36636739 + Missense_Mutation SNP A C TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx ZNF461 92283 broad.mit.edu hg19 19 37130251 37130251 + Missense_Mutation SNP C T PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx ZNF567 163081 broad.mit.edu hg19 19 37203695 37203695 + Missense_Mutation SNP C G P07-144 Unknown Somatic WGS Illumina GAIIx ZNF527 84503 broad.mit.edu hg19 19 37880616 37880616 + Missense_Mutation SNP A C PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx ZNF781 163115 broad.mit.edu hg19 19 38160263 38160263 + Missense_Mutation SNP C T PR-0427-Tumor Unknown Somatic WXS Illumina GAIIx SIPA1L3 23094 broad.mit.edu hg19 19 38633280 38633280 + Missense_Mutation SNP C A TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx SIPA1L3 23094 broad.mit.edu hg19 19 38655514 38655514 + Missense_Mutation SNP G A TCGA-HC-7820-01 Unknown Somatic WXS Illumina GAIIx SIPA1L3 23094 broad.mit.edu hg19 19 38684211 38684211 + Missense_Mutation SNP C T TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx CATSPERG 57828 CPCGene hg19 19 38834683 38834683 + Missense_Mutation SNP C G CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 RYR1 6261 CPCGene hg19 19 38956780 38956780 + Missense_Mutation SNP G A CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 RYR1 6261 broad.mit.edu hg19 19 39019003 39019003 + Missense_Mutation SNP C T P07-684-Tumor Unknown Somatic WXS Illumina GAIIx RYR1 6261 broad.mit.edu hg19 19 39075636 39075636 + Missense_Mutation SNP C T PR-0508 Unknown Somatic WGS Illumina GAIIx RYR1 6261 broad.mit.edu hg19 19 39075636 39075636 + Missense_Mutation SNP C T TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx MAP4K1 11184 CPCGene hg19 19 39087988 39087988 + Missense_Mutation SNP T G CPCG0081-F1 Unknown Somatic WXS Illumina HiSeq 2500 ACTN4 81 CPCGene hg19 19 39208617 39208617 + Missense_Mutation SNP G A CPCG0191-F1 Unknown Somatic WXS Illumina HiSeq 2500 SARS2 54938 CPCGene hg19 19 39406533 39406533 + Missense_Mutation SNP G C CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 FCGBP 8857 broad.mit.edu hg19 19 40420067 40420067 + Missense_Mutation SNP C T TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx FCGBP 8857 CPCGene hg19 19 40430639 40430639 + Missense_Mutation SNP G A CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 PSMC4 5704 broad.mit.edu hg19 19 40480659 40480659 + Missense_Mutation SNP C G PR-2762-Tumor Unknown Somatic WXS Illumina GAIIx ZNF546 339327 broad.mit.edu hg19 19 40520472 40520472 + Missense_Mutation SNP G A TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx MAP3K10 4294 broad.mit.edu hg19 19 40698519 40698519 + Missense_Mutation SNP A G TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx C19 0 broad.mit.edu hg19 19 40832339 40832339 + Missense_Mutation SNP C T TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx PLD3 23646 CPCGene hg19 19 40880430 40880430 + Missense_Mutation SNP C G CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 SERTAD1 29950 broad.mit.edu hg19 19 40928761 40928761 + Missense_Mutation SNP C A PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx SPTBN4 57731 broad.mit.edu hg19 19 41063135 41063135 + Missense_Mutation SNP C T P08-716 Unknown Somatic WGS Illumina GAIIx EGLN2 112398 EMBL hg19 19 41307184 41307184 + Missense_Mutation SNP G T EOPC-05 Unknown Somatic WGS Illumina HiSeq2000 CYP2A13 1553 broad.mit.edu hg19 19 41595958 41595958 + Missense_Mutation SNP C T TCGA-EJ-7793-01 Unknown Somatic WXS Illumina GAIIx CYP2A13 1553 broad.mit.edu hg19 19 41599549 41599549 + Missense_Mutation SNP C A PR-01-2382-Tumor Unknown Somatic WXS Illumina GAIIx AXL 558 CPCGene hg19 19 41726618 41726618 + Missense_Mutation SNP C T CPCG0238-F1 Unknown Somatic WXS Illumina HiSeq 2500 TGFB1 7040 broad.mit.edu hg19 19 41858655 41858655 + Missense_Mutation SNP G T TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx CEACAM3 1084 broad.mit.edu hg19 19 42301582 42301582 + Missense_Mutation SNP G A TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx CEACAM3 1084 broad.mit.edu hg19 19 42312921 42312921 + Missense_Mutation SNP G A TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx ARHGEF1 9138 CPCGene hg19 19 42396425 42396425 + Missense_Mutation SNP C G CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARHGEF1 9138 broad.mit.edu hg19 19 42410938 42410938 + Missense_Mutation SNP A T TCGA-G9-6377-01 Unknown Somatic WXS Illumina GAIIx ATP1A3 478 broad.mit.edu hg19 19 42492241 42492241 + Missense_Mutation SNP G A PR-09-2744-Tumor Unknown Somatic WXS Illumina GAIIx GRIK5 2901 EMBL hg19 19 42558622 42558622 + Missense_Mutation SNP C T EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 GRIK5 2901 broad.mit.edu hg19 19 42566936 42566936 + Missense_Mutation SNP C T TCGA-G9-6377-01 Unknown Somatic WXS Illumina GAIIx POU2F2 5452 broad.mit.edu hg19 19 42626700 42626700 + Missense_Mutation SNP G A PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx DEDD2 162989 broad.mit.edu hg19 19 42703913 42703913 + Missense_Mutation SNP G A PR-2761-Tumor Unknown Somatic WXS Illumina GAIIx DEDD2 162989 broad.mit.edu hg19 19 42719342 42719342 + Missense_Mutation SNP G A TCGA-HC-A6AP-01 Unknown Somatic WXS Illumina GAIIx CIC 23152 CPCGene hg19 19 42796896 42796896 + Missense_Mutation SNP G T CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 CIC 23152 broad.mit.edu hg19 19 42797154 42797154 + Missense_Mutation SNP C A P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx MEGF8 1954 broad.mit.edu hg19 19 42880082 42880082 + Missense_Mutation SNP C T P07-837 Unknown Somatic WGS Illumina GAIIx LIPE 3991 CPCGene hg19 19 42906143 42906143 + Missense_Mutation SNP C G CPCG0267-F1 Unknown Somatic WXS Illumina HiSeq 2500 PSG7 5676 broad.mit.edu hg19 19 43439576 43439576 + Missense_Mutation SNP C A PR-01-2492-Tumor Unknown Somatic WXS Illumina GAIIx ZNF575 284346 broad.mit.edu hg19 19 44039367 44039367 + Missense_Mutation SNP G A P03-1426 Unknown Somatic WGS Illumina GAIIx IRGQ 126298 broad.mit.edu hg19 19 44096217 44096217 + Missense_Mutation SNP A G PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx SRRM5 100170229 EMBL hg19 19 44118079 44118079 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 SRRM5 100170229 broad.mit.edu hg19 19 44118391 44118391 + Missense_Mutation SNP G T TCGA-J4-8200-01 Unknown Somatic WXS Illumina GAIIx ZNF224 7767 CPCGene hg19 19 44612162 44612162 + Missense_Mutation SNP C T CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF234 10780 CPCGene hg19 19 44661005 44661005 + Missense_Mutation SNP A G CPCG0210-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF234 10780 broad.mit.edu hg19 19 44662099 44662099 + Missense_Mutation SNP C T PR-04-1243 Unknown Somatic WGS Illumina GAIIx ZNF112 7771 broad.mit.edu hg19 19 44831717 44831717 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx CEACAM20 125931 broad.mit.edu hg19 19 45029262 45029262 + Missense_Mutation SNP A G TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx CEACAM16 388551 broad.mit.edu hg19 19 45206769 45206769 + Missense_Mutation SNP A G P09-1580-Tumor Unknown Somatic WXS Illumina GAIIx CLPTM1 1209 broad.mit.edu hg19 19 45491362 45491362 + Missense_Mutation SNP T C P07-4941 Unknown Somatic WGS Illumina GAIIx CLASRP 11129 broad.mit.edu hg19 19 45572490 45572490 + Missense_Mutation SNP C G P07-4941 Unknown Somatic WGS Illumina GAIIx GEMIN7 79760 broad.mit.edu hg19 19 45593388 45593388 + Missense_Mutation SNP A G TCGA-EJ-7785-01 Unknown Somatic WXS Illumina GAIIx PPP1R37 284352 CPCGene hg19 19 45649196 45649196 + Missense_Mutation SNP C T CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 NKPD1 284353 CPCGene hg19 19 45662328 45662328 + Missense_Mutation SNP G A CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 ERCC2 2068 broad.mit.edu hg19 19 45858059 45858059 + Missense_Mutation SNP G A TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx CD3EAP 10849 broad.mit.edu hg19 19 45911967 45911967 + Missense_Mutation SNP G A TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx RTN2 6253 CPCGene hg19 19 45996446 45996446 + Missense_Mutation SNP G C CPCG0124-F1 Unknown Somatic WXS Illumina HiSeq 2500 EML2 24139 broad.mit.edu hg19 19 46119742 46119742 + Missense_Mutation SNP C A TCGA-HC-A6AO-01 Unknown Somatic WXS Illumina GAIIx EML2 24139 broad.mit.edu hg19 19 46120055 46120055 + Missense_Mutation SNP T C PR-03-3125 Unknown Somatic WGS Illumina GAIIx DMWD 1762 CPCGene hg19 19 46289280 46289280 + Missense_Mutation SNP G A CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 RSPH6A 81492 broad.mit.edu hg19 19 46303813 46303813 + Missense_Mutation SNP G A TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx SYMPK 8189 broad.mit.edu hg19 19 46334800 46334800 + Missense_Mutation SNP C T TCGA-EJ-7794-01 Unknown Somatic WXS Illumina GAIIx CCDC8 83987 broad.mit.edu hg19 19 46914722 46914722 + Missense_Mutation SNP G A TCGA-J4-A83L-01 Unknown Somatic WXS Illumina GAIIx PNMAL1 55228 CPCGene hg19 19 46973225 46973225 + Missense_Mutation SNP C G CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 PTGIR 5739 broad.mit.edu hg19 19 47127028 47127028 + Missense_Mutation SNP G A PR-0099-Tumor Unknown Somatic WXS Illumina GAIIx STRN4 29888 broad.mit.edu hg19 19 47225582 47225582 + Missense_Mutation SNP T C P04-1084 Unknown Somatic WGS Illumina GAIIx STRN4 29888 broad.mit.edu hg19 19 47236332 47236332 + Missense_Mutation SNP G T TCGA-HC-7075-01 Unknown Somatic WGS Illumina GAIIx SLC1A5 6510 broad.mit.edu hg19 19 47290920 47290920 + Missense_Mutation SNP C A P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx ARHGAP35 2909 CPCGene hg19 19 47491270 47491270 + Missense_Mutation SNP G A CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZC3H4 23211 CPCGene hg19 19 47593436 47593436 + Missense_Mutation SNP T C CPCG0366-F1 Unknown Somatic WXS Illumina HiSeq 2500 C5AR2 27202 broad.mit.edu hg19 19 47844503 47844503 + Missense_Mutation SNP C T PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx DHX34 9704 broad.mit.edu hg19 19 47856825 47856825 + Missense_Mutation SNP G A TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx GLTSCR2 29997 broad.mit.edu hg19 19 48254189 48254189 + Missense_Mutation SNP C A TCGA-G9-6363-01 Unknown Somatic WXS Illumina GAIIx GLTSCR2 29997 CPCGene hg19 19 48257869 48257869 + Missense_Mutation SNP C T CPCG0258-F1 Unknown Somatic WXS Illumina HiSeq 2500 CABP5 56344 broad.mit.edu hg19 19 48533840 48533840 + Splice_Site SNP C T TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx PLA2G4C 8605 broad.mit.edu hg19 19 48558213 48558213 + Missense_Mutation SNP C T PR-00-1823-Tumor Unknown Somatic WXS Illumina GAIIx LIG1 3978 broad.mit.edu hg19 19 48654539 48654539 + Missense_Mutation SNP C T TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx ZNF114 163071 CPCGene hg19 19 48789743 48789743 + Missense_Mutation SNP G A CPCG0123-F1 Unknown Somatic WXS Illumina HiSeq 2500 GRIN2D 2906 CPCGene hg19 19 48908147 48908147 + Missense_Mutation SNP A C CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAM83E 54854 broad.mit.edu hg19 19 49107168 49107168 + Missense_Mutation SNP G A TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx GYS1 2997 broad.mit.edu hg19 19 49490530 49490530 + Missense_Mutation SNP T C TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx CGB7 94027 broad.mit.edu hg19 19 49558205 49558205 + Missense_Mutation SNP G A TCGA-HC-A6AQ-01 Unknown Somatic WXS Illumina GAIIx SNRNP70 6625 CPCGene hg19 19 49611565 49611565 + Missense_Mutation SNP A G CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 PPFIA3 8541 broad.mit.edu hg19 19 49631323 49631323 + Missense_Mutation SNP C G PR-05-3595 Unknown Somatic WGS Illumina GAIIx TRPM4 54795 CPCGene hg19 19 49669452 49669452 + Missense_Mutation SNP G C CPCG0269-F1 Unknown Somatic WXS Illumina HiSeq 2500 TRPM4 54795 CPCGene hg19 19 49705356 49705356 + Missense_Mutation SNP T A CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 PTH2 113091 broad.mit.edu hg19 19 49926533 49926533 + Missense_Mutation SNP G C TCGA-FC-A8O0-01 Unknown Somatic WXS Illumina GAIIx RPL13A 23521 CPCGene hg19 19 49995069 49995069 + Missense_Mutation SNP C T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 RPS11 6205 broad.mit.edu hg19 19 50000530 50000530 + Missense_Mutation SNP A C TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx TSKS 60385 broad.mit.edu hg19 19 50248570 50248570 + Missense_Mutation SNP C T PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx TSKS 60385 broad.mit.edu hg19 19 50248602 50248602 + Missense_Mutation SNP C T TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx TSKS 60385 broad.mit.edu hg19 19 50249950 50249950 + Missense_Mutation SNP C T P07-837 Unknown Somatic WGS Illumina GAIIx PTOV1 53635 broad.mit.edu hg19 19 50354606 50354606 + Missense_Mutation SNP C T TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx TBC1D17 79735 broad.mit.edu hg19 19 50386969 50386969 + Missense_Mutation SNP A C TCGA-ZG-A8QX-01 Unknown Somatic WXS Illumina GAIIx TBC1D17 79735 broad.mit.edu hg19 19 50387960 50387960 + Missense_Mutation SNP C T P04-2740-Tumor Unknown Somatic WXS Illumina GAIIx MYH14 79784 CPCGene hg19 19 50783609 50783609 + Missense_Mutation SNP C T CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 NAPSA 9476 broad.mit.edu hg19 19 50864267 50864267 + Missense_Mutation SNP C T TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx MYBPC2 4606 broad.mit.edu hg19 19 50939044 50939044 + Missense_Mutation SNP G A TCGA-EJ-5498-01 Unknown Somatic WXS Illumina GAIIx LRRC4B 94030 CPCGene hg19 19 51021940 51021940 + Missense_Mutation SNP C T CPCG0057-F1 Unknown Somatic WXS Illumina HiSeq 2500 SYT3 84258 EMBL hg19 19 51132557 51132557 + Missense_Mutation SNP G A EOPC-10 Unknown Somatic WGS Illumina HiSeq2000 SHANK1 50944 CPCGene hg19 19 51214684 51214684 + Missense_Mutation SNP C T CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 SHANK1 50944 CPCGene hg19 19 51219610 51219610 + Missense_Mutation SNP G A CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 CLEC11A 6320 broad.mit.edu hg19 19 51227212 51227212 + Missense_Mutation SNP T G TCGA-G9-6498-01 Unknown Somatic WXS Illumina GAIIx CLEC11A 6320 CPCGene hg19 19 51228652 51228652 + Missense_Mutation SNP C T CPCG0154-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPR32 2854 broad.mit.edu hg19 19 51273918 51273918 + Missense_Mutation SNP C T TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx KLK4 9622 broad.mit.edu hg19 19 51412631 51412631 + Missense_Mutation SNP C T TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx KLK5 25818 broad.mit.edu hg19 19 51453323 51453323 + Missense_Mutation SNP G A TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx KLK6 5653 broad.mit.edu hg19 19 51462556 51462556 + Missense_Mutation SNP G A TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx KLK8 11202 CPCGene hg19 19 51499377 51499377 + Missense_Mutation SNP C T CPCG0259-F1 Unknown Somatic WXS Illumina HiSeq 2500 KLK8 11202 broad.mit.edu hg19 19 51503501 51503501 + Missense_Mutation SNP G A PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx KLK10 5655 broad.mit.edu hg19 19 51519364 51519364 + Missense_Mutation SNP T G PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx NKG7 4818 CPCGene hg19 19 51875727 51875727 + Missense_Mutation SNP A T CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 HAS1 3036 CPCGene hg19 19 52222848 52222848 + Missense_Mutation SNP G C CPCG0081-F1 Unknown Somatic WXS Illumina HiSeq 2500 FPR3 2359 broad.mit.edu hg19 19 52327447 52327447 + Missense_Mutation SNP T C P05-3852 Unknown Somatic WGS Illumina GAIIx ZNF616 90317 broad.mit.edu hg19 19 52633757 52633757 + Missense_Mutation SNP A C PR-01-2492-Tumor Unknown Somatic WXS Illumina GAIIx ZNF528 84436 broad.mit.edu hg19 19 52919410 52919410 + Missense_Mutation SNP G T TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx ZNF534 147658 broad.mit.edu hg19 19 52937267 52937267 + Missense_Mutation SNP G A TCGA-EJ-5517-01 Unknown Somatic WXS Illumina GAIIx ZNF534 147658 CPCGene hg19 19 52942120 52942120 + Missense_Mutation SNP C T CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF611 81856 broad.mit.edu hg19 19 53208222 53208222 + Missense_Mutation SNP G T PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx ZNF415 55786 broad.mit.edu hg19 19 53611720 53611720 + Missense_Mutation SNP A G P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx ZNF347 84671 broad.mit.edu hg19 19 53644584 53644584 + Missense_Mutation SNP G C PR-00-1823-Tumor Unknown Somatic WXS Illumina GAIIx NLRP12 91662 broad.mit.edu hg19 19 54314362 54314362 + Missense_Mutation SNP G A TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx PRKCG 5582 broad.mit.edu hg19 19 54395835 54395835 + Missense_Mutation SNP C T TCGA-EJ-7783-01 Unknown Somatic WXS Illumina GAIIx PRKCG 5582 broad.mit.edu hg19 19 54404000 54404000 + Missense_Mutation SNP G A P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx CACNG6 59285 CPCGene hg19 19 54515283 54515283 + Missense_Mutation SNP C T CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 CNOT3 4849 broad.mit.edu hg19 19 54646887 54646887 + Missense_Mutation SNP G A TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx LILRB5 10990 broad.mit.edu hg19 19 54756362 54756362 + Missense_Mutation SNP C T TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx LILRA4 23547 broad.mit.edu hg19 19 54848157 54848157 + Missense_Mutation SNP A G TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx LAIR1 3903 broad.mit.edu hg19 19 54872628 54872628 + Missense_Mutation SNP G A TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx LENG8 114823 CPCGene hg19 19 54965688 54965688 + Missense_Mutation SNP C T CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 LILRA1 11024 broad.mit.edu hg19 19 55106788 55106788 + Missense_Mutation SNP G A TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx LILRA1 11024 broad.mit.edu hg19 19 55107871 55107871 + Missense_Mutation SNP G A PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx DNAAF3 352909 CPCGene hg19 19 55677227 55677227 + Missense_Mutation SNP T C CPCG0409-F1 Unknown Somatic WXS Illumina HiSeq 2500 SYT5 6861 broad.mit.edu hg19 19 55687185 55687185 + Missense_Mutation SNP C T TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx PTPRH 5794 broad.mit.edu hg19 19 55693461 55693461 + Missense_Mutation SNP G C P04-2740-Tumor Unknown Somatic WXS Illumina GAIIx PTPRH 5794 broad.mit.edu hg19 19 55707952 55707952 + Missense_Mutation SNP G A P03-1906-Tumor Unknown Somatic WXS Illumina GAIIx HSPBP1 23640 broad.mit.edu hg19 19 55774039 55774039 + Missense_Mutation SNP C G TCGA-G9-7519-01 Unknown Somatic WXS Illumina GAIIx HSPBP1 23640 broad.mit.edu hg19 19 55789207 55789207 + Missense_Mutation SNP T C TCGA-G9-6363-01 Unknown Somatic WXS Illumina GAIIx BRSK1 84446 broad.mit.edu hg19 19 55817710 55817710 + Missense_Mutation SNP G A PR-07-4610 Unknown Somatic WGS Illumina GAIIx FAM71E2 284418 CPCGene hg19 19 55870124 55870124 + Missense_Mutation SNP C T CPCG0001-F1 Unknown Somatic WXS Illumina HiSeq 2500 RPL28 6158 broad.mit.edu hg19 19 55898067 55898067 + Missense_Mutation SNP T G P09-2497-Tumor Unknown Somatic WXS Illumina GAIIx NLRP11 204801 CPCGene hg19 19 56329269 56329269 + Splice_Site SNP C T CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 NLRP4 147945 broad.mit.edu hg19 19 56369989 56369989 + Missense_Mutation SNP C T TCGA-ZG-A8QX-01 Unknown Somatic WXS Illumina GAIIx ZNF583 147949 broad.mit.edu hg19 19 56935562 56935562 + Missense_Mutation SNP G A TCGA-HC-A6AS-01 Unknown Somatic WXS Illumina GAIIx ZFP28 140612 CPCGene hg19 19 57059245 57059245 + Missense_Mutation SNP G A CPCG0182-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZFP28 140612 broad.mit.edu hg19 19 57066726 57066726 + Missense_Mutation SNP T C P04-1421-Tumor Unknown Somatic WXS Illumina GAIIx ZNF71 58491 broad.mit.edu hg19 19 57132704 57132704 + Missense_Mutation SNP G A P04-1421-Tumor Unknown Somatic WXS Illumina GAIIx PEG3 5178 broad.mit.edu hg19 19 57326295 57326295 + Missense_Mutation SNP A T P03-2620-Tumor Unknown Somatic WXS Illumina GAIIx PEG3 5178 CPCGene hg19 19 57327113 57327113 + Missense_Mutation SNP T A CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 PEG3 5178 CPCGene hg19 19 57327631 57327631 + Missense_Mutation SNP G A CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 PEG3 5178 broad.mit.edu hg19 19 57328121 57328121 + Missense_Mutation SNP G A PR-09-5630-Tumor Unknown Somatic WXS Illumina GAIIx PEG3 5178 broad.mit.edu hg19 19 57334134 57334134 + Missense_Mutation SNP C T P00-000450-Tumor Unknown Somatic WXS Illumina GAIIx ZIM3 114026 broad.mit.edu hg19 19 57646542 57646542 + Missense_Mutation SNP T C P04-1084 Unknown Somatic WGS Illumina GAIIx AURKC 6795 broad.mit.edu hg19 19 57743486 57743486 + Missense_Mutation SNP G A P03-2620-Tumor Unknown Somatic WXS Illumina GAIIx ZNF749 388567 broad.mit.edu hg19 19 57956721 57956721 + Missense_Mutation SNP A C TCGA-G9-6348-01 Unknown Somatic WXS Illumina GAIIx ZNF419 79744 broad.mit.edu hg19 19 58004971 58004971 + Missense_Mutation SNP G T PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx ZNF773 374928 broad.mit.edu hg19 19 58017987 58017987 + Missense_Mutation SNP A G TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx ZNF154 7710 CPCGene hg19 19 58214007 58214007 + Missense_Mutation SNP A G CPCG0409-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF587B 100293516 broad.mit.edu hg19 19 58352939 58352939 + Missense_Mutation SNP G A TCGA-EJ-5504-01 Unknown Somatic WXS Illumina GAIIx ZNF418 147686 broad.mit.edu hg19 19 58439119 58439119 + Missense_Mutation SNP C T P03-2345 Unknown Somatic WGS Illumina GAIIx ZSCAN1 284312 EMBL hg19 19 58563879 58563879 + Missense_Mutation SNP G A EOPC-11 Unknown Somatic WGS Illumina HiSeq2000 ZSCAN1 284312 broad.mit.edu hg19 19 58565071 58565071 + Missense_Mutation SNP G T TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx RPS5 6193 broad.mit.edu hg19 19 58904750 58904750 + Missense_Mutation SNP G A PR-09-5446-Tumor Unknown Somatic WXS Illumina GAIIx FAM110C 642273 CPCGene hg19 2 46048 46048 + Missense_Mutation SNP G A CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 ACP1 52 broad.mit.edu hg19 2 264982 264982 + Missense_Mutation SNP C G P04-1084 Unknown Somatic WGS Illumina GAIIx PXDN 7837 EMBL hg19 2 1680808 1680808 + Missense_Mutation SNP G A EOPC-02 Unknown Somatic WGS Illumina HiSeq2000 MYT1L 23040 CPCGene hg19 2 1946986 1946986 + Missense_Mutation SNP G A CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIDINS220 57498 broad.mit.edu hg19 2 8874814 8874814 + Missense_Mutation SNP A C TCGA-EJ-7315-01 Unknown Somatic WXS Illumina GAIIx KIDINS220 57498 CPCGene hg19 2 8930170 8930170 + Missense_Mutation SNP G A CPCG0409-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATP6V1C2 245973 broad.mit.edu hg19 2 10918726 10918726 + Missense_Mutation SNP A C TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx ROCK2 9475 CPCGene hg19 2 11351944 11351944 + Missense_Mutation SNP T C CPCG0360-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAM84A 151354 CPCGene hg19 2 14774789 14774789 + Missense_Mutation SNP G C CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 NBAS 51594 broad.mit.edu hg19 2 15679348 15679348 + Missense_Mutation SNP G C P05-620 Unknown Somatic WGS Illumina GAIIx RAD51AP2 729475 broad.mit.edu hg19 2 17698876 17698876 + Missense_Mutation SNP T G P05-3852 Unknown Somatic WGS Illumina GAIIx KCNS3 3790 broad.mit.edu hg19 2 18113515 18113515 + Missense_Mutation SNP C G PR-02-2072-Tumor Unknown Somatic WXS Illumina GAIIx PUM2 23369 broad.mit.edu hg19 2 20511393 20511393 + Missense_Mutation SNP T A PR-2740-Tumor Unknown Somatic WXS Illumina GAIIx APOB 338 broad.mit.edu hg19 2 21231311 21231311 + Missense_Mutation SNP G T TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx APOB 338 broad.mit.edu hg19 2 21232902 21232902 + Missense_Mutation SNP G A TCGA-J4-A67K-01 Unknown Somatic WXS Illumina GAIIx APOB 338 broad.mit.edu hg19 2 21233706 21233706 + Missense_Mutation SNP G A TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx KLHL29 114818 broad.mit.edu hg19 2 23865720 23865720 + Missense_Mutation SNP G A P05-620 Unknown Somatic WGS Illumina GAIIx ATAD2B 54454 broad.mit.edu hg19 2 24011409 24011409 + Missense_Mutation SNP T C TCGA-G9-7519-01 Unknown Somatic WXS Illumina GAIIx C2 717 broad.mit.edu hg19 2 24261454 24261454 + Missense_Mutation SNP C G TCGA-G9-6338-01 Unknown Somatic WXS Illumina GAIIx PTRHD1 391356 broad.mit.edu hg19 2 25013294 25013294 + Missense_Mutation SNP G A P08-716 Unknown Somatic WGS Illumina GAIIx ADCY3 109 broad.mit.edu hg19 2 25043645 25043645 + Missense_Mutation SNP G A P03-2620-Tumor Unknown Somatic WXS Illumina GAIIx ADCY3 109 broad.mit.edu hg19 2 25059790 25059790 + Missense_Mutation SNP G A P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx DNMT3A 1788 CPCGene hg19 2 25457243 25457243 + Missense_Mutation SNP G A CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 DNMT3A 1788 EMBL hg19 2 25472559 25472559 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 KIF3C 3797 CPCGene hg19 2 26203423 26203423 + Missense_Mutation SNP T C CPCG0087-F1 Unknown Somatic WXS Illumina HiSeq 2500 HADHA 3030 CPCGene hg19 2 26426934 26426934 + Missense_Mutation SNP T C CPCG0124-F1 Unknown Somatic WXS Illumina HiSeq 2500 OTOF 9381 broad.mit.edu hg19 2 26696866 26696866 + Missense_Mutation SNP C T TCGA-J4-A6M7-01 Unknown Somatic WXS Illumina GAIIx OTOF 9381 CPCGene hg19 2 26698338 26698338 + Missense_Mutation SNP G A CPCG0355-F1 Unknown Somatic WXS Illumina HiSeq 2500 OTOF 9381 broad.mit.edu hg19 2 26717923 26717923 + Missense_Mutation SNP C T TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx OTOF 9381 CPCGene hg19 2 26741909 26741909 + Missense_Mutation SNP G A CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 DPYSL5 56896 broad.mit.edu hg19 2 27147850 27147850 + Missense_Mutation SNP G A TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx TMEM214 54867 broad.mit.edu hg19 2 27258872 27258872 + Missense_Mutation SNP G A TCGA-CH-5790-01 Unknown Somatic WXS Illumina GAIIx AGBL5 60509 broad.mit.edu hg19 2 27280260 27280260 + Missense_Mutation SNP C G TCGA-Y6-A8TL-01 Unknown Somatic WXS Illumina GAIIx ABHD1 84696 broad.mit.edu hg19 2 27351917 27351917 + Missense_Mutation SNP T G TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx CAD 790 broad.mit.edu hg19 2 27457443 27457443 + Missense_Mutation SNP G A TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx GTF3C2 2976 CPCGene hg19 2 27564835 27564835 + Missense_Mutation SNP G C CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 SNX17 9784 broad.mit.edu hg19 2 27599352 27599352 + Missense_Mutation SNP C T TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx SNX17 9784 broad.mit.edu hg19 2 27599549 27599549 + Missense_Mutation SNP A G TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx IFT172 26160 CPCGene hg19 2 27681654 27681654 + Missense_Mutation SNP C T CPCG0362-F1 Unknown Somatic WXS Illumina HiSeq 2500 C2 717 broad.mit.edu hg19 2 27802537 27802537 + Missense_Mutation SNP C T TCGA-VP-A87C-01 Unknown Somatic WXS Illumina GAIIx ZNF512 84450 broad.mit.edu hg19 2 27822524 27822524 + Missense_Mutation SNP C T TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx CCDC121 79635 broad.mit.edu hg19 2 27850383 27850383 + Missense_Mutation SNP T C TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx FOSL2 2355 broad.mit.edu hg19 2 28631650 28631650 + Missense_Mutation SNP C T PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx C2 717 broad.mit.edu hg19 2 29293660 29293660 + Missense_Mutation SNP G A PR-2761-Tumor Unknown Somatic WXS Illumina GAIIx C2 717 CPCGene hg19 2 29296195 29296195 + Missense_Mutation SNP C T CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 ALK 238 CPCGene hg19 2 29436942 29436942 + Missense_Mutation SNP C G CPCG0259-F1 Unknown Somatic WXS Illumina HiSeq 2500 YPEL5 51646 broad.mit.edu hg19 2 30381692 30381692 + Missense_Mutation SNP C T PR-STID0000003127 Unknown Somatic WGS Illumina GAIIx LBH 81606 broad.mit.edu hg19 2 30480447 30480447 + Missense_Mutation SNP A G TCGA-2A-A8VL-01 Unknown Somatic WXS Illumina GAIIx CAPN13 92291 broad.mit.edu hg19 2 30987143 30987143 + Missense_Mutation SNP T C TCGA-G9-6364-01 Unknown Somatic WXS Illumina GAIIx MEMO1 51072 broad.mit.edu hg19 2 32145945 32145945 + Missense_Mutation SNP C A TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx SLC30A6 55676 broad.mit.edu hg19 2 32429723 32429723 + Missense_Mutation SNP T C TCGA-EJ-7315-01 Unknown Somatic WXS Illumina GAIIx BIRC6 57448 broad.mit.edu hg19 2 32666464 32666464 + Missense_Mutation SNP G T PR-3036-Tumor Unknown Somatic WXS Illumina GAIIx BIRC6 57448 broad.mit.edu hg19 2 32712725 32712725 + Missense_Mutation SNP C A TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx BIRC6 57448 broad.mit.edu hg19 2 32740782 32740782 + Missense_Mutation SNP C T P05-3859-Tumor Unknown Somatic WXS Illumina GAIIx BIRC6 57448 CPCGene hg19 2 32772976 32772976 + Missense_Mutation SNP C G CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 HEATR5B 54497 broad.mit.edu hg19 2 37234300 37234300 + Missense_Mutation SNP C G P08-492 Unknown Somatic WGS Illumina GAIIx HEATR5B 54497 broad.mit.edu hg19 2 37280709 37280709 + Missense_Mutation SNP G A TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx HEATR5B 54497 broad.mit.edu hg19 2 37297506 37297506 + Missense_Mutation SNP G A P07-144 Unknown Somatic WGS Illumina GAIIx CEBPZ 10153 CPCGene hg19 2 37455074 37455074 + Missense_Mutation SNP G C CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRKD3 23683 broad.mit.edu hg19 2 37494595 37494595 + Missense_Mutation SNP C T PR-02-254-Tumor Unknown Somatic WXS Illumina GAIIx HNRNPLL 92906 CPCGene hg19 2 38800371 38800371 + Missense_Mutation SNP A T CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 DHX57 90957 CPCGene hg19 2 39053657 39053657 + Splice_Site SNP C A CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 DHX57 90957 broad.mit.edu hg19 2 39053764 39053764 + Missense_Mutation SNP G A TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx MAP4K3 8491 broad.mit.edu hg19 2 39664095 39664095 + Missense_Mutation SNP G T PR-06-1749 Unknown Somatic WGS Illumina GAIIx SLC8A1 6546 broad.mit.edu hg19 2 40366712 40366712 + Missense_Mutation SNP C A TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx EML4 27436 broad.mit.edu hg19 2 42543187 42543187 + Missense_Mutation SNP A T TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx KCNG3 170850 CPCGene hg19 2 42720261 42720261 + Missense_Mutation SNP G A CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 THADA 63892 broad.mit.edu hg19 2 43625211 43625211 + Missense_Mutation SNP T C TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx THADA 63892 broad.mit.edu hg19 2 43726060 43726060 + Missense_Mutation SNP C G P08-492 Unknown Somatic WGS Illumina GAIIx THADA 63892 broad.mit.edu hg19 2 43779341 43779341 + Missense_Mutation SNP A G P07-144 Unknown Somatic WGS Illumina GAIIx PLEKHH2 130271 broad.mit.edu hg19 2 43926933 43926933 + Missense_Mutation SNP C T TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx PLEKHH2 130271 broad.mit.edu hg19 2 43989458 43989458 + Missense_Mutation SNP T C P05-620 Unknown Somatic WGS Illumina GAIIx SLC3A1 6519 broad.mit.edu hg19 2 44547502 44547502 + Missense_Mutation SNP C G TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx SIX3 6496 broad.mit.edu hg19 2 45170030 45170030 + Missense_Mutation SNP G A TCGA-ZG-A8QX-01 Unknown Somatic WXS Illumina GAIIx SIX2 10736 broad.mit.edu hg19 2 45233549 45233549 + Missense_Mutation SNP C T TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx TTC7A 57217 broad.mit.edu hg19 2 47278910 47278910 + Missense_Mutation SNP C T TCGA-G9-6379-01 Unknown Somatic WXS Illumina GAIIx MSH6 2956 broad.mit.edu hg19 2 48026269 48026269 + Missense_Mutation SNP A G TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx FOXN2 3344 broad.mit.edu hg19 2 48573435 48573435 + Missense_Mutation SNP T C TCGA-QU-A6IO-01 Unknown Somatic WXS Illumina GAIIx GTF2A1L 11036 EMBL hg19 2 48896939 48896939 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 NRXN1 9378 broad.mit.edu hg19 2 50464003 50464003 + Missense_Mutation SNP C T TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx NRXN1 9378 broad.mit.edu hg19 2 50574036 50574036 + Missense_Mutation SNP C T TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx NRXN1 9378 broad.mit.edu hg19 2 51255226 51255226 + Missense_Mutation SNP G A TCGA-G9-6348-01 Unknown Somatic WXS Illumina GAIIx SPTBN1 6711 broad.mit.edu hg19 2 54753666 54753666 + Missense_Mutation SNP G A TCGA-G9-6364-01 Unknown Somatic WXS Illumina GAIIx RTN4 57142 broad.mit.edu hg19 2 55277405 55277405 + Missense_Mutation SNP G A PR-03-1026-Tumor Unknown Somatic WXS Illumina GAIIx CCDC88A 55704 broad.mit.edu hg19 2 55582770 55582770 + Missense_Mutation SNP G C TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx CCDC104 0 broad.mit.edu hg19 2 55746969 55746969 + Missense_Mutation SNP G T TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx CCDC104 0 broad.mit.edu hg19 2 55761039 55761039 + Missense_Mutation SNP C G P07-4941 Unknown Somatic WGS Illumina GAIIx EFEMP1 2202 broad.mit.edu hg19 2 56104979 56104979 + Missense_Mutation SNP G A TCGA-J4-A67N-01 Unknown Somatic WXS Illumina GAIIx PEX13 5194 broad.mit.edu hg19 2 61272954 61272954 + Missense_Mutation SNP G A PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx USP34 9736 CPCGene hg19 2 61433249 61433249 + Missense_Mutation SNP T A CPCG0001-F1 Unknown Somatic WXS Illumina HiSeq 2500 USP34 9736 CPCGene hg19 2 61607470 61607470 + Missense_Mutation SNP T C CPCG0410-F1 Unknown Somatic WXS Illumina HiSeq 2500 XPO1 7514 broad.mit.edu hg19 2 61719472 61719472 + Missense_Mutation SNP C T PR-09-2517-Tumor Unknown Somatic WXS Illumina GAIIx EHBP1 23301 broad.mit.edu hg19 2 63058185 63058185 + Missense_Mutation SNP A G PR-04-3347-Tumor Unknown Somatic WXS Illumina GAIIx OTX1 5013 broad.mit.edu hg19 2 63283375 63283375 + Missense_Mutation SNP C G TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx AFTPH 54812 broad.mit.edu hg19 2 64800113 64800113 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx MEIS1 4211 broad.mit.edu hg19 2 66794638 66794638 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx PPP3R1 5534 CPCGene hg19 2 68444245 68444245 + Missense_Mutation SNP G C CPCG0078-F1 Unknown Somatic WXS Illumina HiSeq 2500 PROKR1 10887 broad.mit.edu hg19 2 68882252 68882252 + Missense_Mutation SNP G T TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx ARHGAP25 9938 CPCGene hg19 2 69034596 69034596 + Missense_Mutation SNP C T CPCG0410-F1 Unknown Somatic WXS Illumina HiSeq 2500 BMP10 27302 CPCGene hg19 2 69093551 69093551 + Missense_Mutation SNP G T CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 GKN2 200504 broad.mit.edu hg19 2 69173530 69173530 + Missense_Mutation SNP C G TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx GFPT1 2673 CPCGene hg19 2 69577223 69577223 + Missense_Mutation SNP C T CPCG0348-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATP6V1B1 525 CPCGene hg19 2 71190378 71190378 + Missense_Mutation SNP G A CPCG0057-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANKRD53 79998 CPCGene hg19 2 71209820 71209820 + Missense_Mutation SNP A T CPCG0182-F1 Unknown Somatic WXS Illumina HiSeq 2500 CYP26B1 56603 CPCGene hg19 2 72362273 72362273 + Missense_Mutation SNP C T CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 SFXN5 94097 broad.mit.edu hg19 2 73227573 73227573 + Missense_Mutation SNP C T PR-08-4154 Unknown Somatic WGS Illumina GAIIx ALMS1 7840 CPCGene hg19 2 73678670 73678670 + Missense_Mutation SNP C T CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 ALMS1 7840 EMBL hg19 2 73717195 73717195 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 ALMS1 7840 broad.mit.edu hg19 2 73828485 73828485 + Missense_Mutation SNP C T TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx TPRKB 51002 broad.mit.edu hg19 2 73961632 73961632 + Missense_Mutation SNP T C PR-08-556 Unknown Somatic WGS Illumina GAIIx STAMBP 10617 broad.mit.edu hg19 2 74072296 74072296 + Missense_Mutation SNP A G TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx DGUOK 1716 broad.mit.edu hg19 2 74177857 74177857 + Missense_Mutation SNP C T PR-0508 Unknown Somatic WGS Illumina GAIIx TET3 200424 EMBL hg19 2 74274416 74274416 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 MTHFD2 10797 CPCGene hg19 2 74435786 74435786 + Missense_Mutation SNP T A CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 INO80B 83444 broad.mit.edu hg19 2 74684869 74684869 + Missense_Mutation SNP C A PR-STID0000002872 Unknown Somatic WGS Illumina GAIIx TACR1 6869 broad.mit.edu hg19 2 75347894 75347894 + Missense_Mutation SNP C G TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx MRPL19 9801 broad.mit.edu hg19 2 75879653 75879653 + Missense_Mutation SNP T C TCGA-EJ-7784-01 Unknown Somatic WXS Illumina GAIIx GCFC2 6936 EMBL hg19 2 75919146 75919146 + Missense_Mutation SNP T A EOPC-04 Unknown Somatic WGS Illumina HiSeq2000 REG3G 130120 broad.mit.edu hg19 2 79255008 79255008 + Missense_Mutation SNP C G TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx REG1A 5967 broad.mit.edu hg19 2 79349167 79349167 + Missense_Mutation SNP C T TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx CTNNA2 1496 broad.mit.edu hg19 2 79971527 79971527 + Missense_Mutation SNP C A PR-2525 Unknown Somatic WGS Illumina GAIIx LRRTM1 347730 broad.mit.edu hg19 2 80530262 80530262 + Missense_Mutation SNP T C TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx CTNNA2 1496 broad.mit.edu hg19 2 80646714 80646714 + Missense_Mutation SNP C G PR-04-1243 Unknown Somatic WGS Illumina GAIIx CTNNA2 1496 broad.mit.edu hg19 2 80801387 80801387 + Missense_Mutation SNP G A PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx DNAH6 1768 CPCGene hg19 2 84881830 84881830 + Missense_Mutation SNP G T CPCG0374-F1 Unknown Somatic WXS Illumina HiSeq 2500 DNAH6 1768 CPCGene hg19 2 84899514 84899514 + Missense_Mutation SNP G A CPCG0001-F1 Unknown Somatic WXS Illumina HiSeq 2500 KCMF1 56888 CPCGene hg19 2 85262220 85262220 + Missense_Mutation SNP C T CPCG0334-F1 Unknown Somatic WXS Illumina HiSeq 2500 TGOLN2 10618 broad.mit.edu hg19 2 85553644 85553644 + Missense_Mutation SNP T C TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx TGOLN2 10618 broad.mit.edu hg19 2 85555056 85555056 + Missense_Mutation SNP C A P08-590-Tumor Unknown Somatic WXS Illumina GAIIx ELMOD3 84173 broad.mit.edu hg19 2 85617411 85617411 + Missense_Mutation SNP G A P04-1421-Tumor Unknown Somatic WXS Illumina GAIIx ST3GAL5 8869 broad.mit.edu hg19 2 86067399 86067399 + Missense_Mutation SNP G A TCGA-G9-6377-01 Unknown Somatic WXS Illumina GAIIx PTCD3 55037 broad.mit.edu hg19 2 86354404 86354404 + Missense_Mutation SNP C A TCGA-Y6-A8TL-01 Unknown Somatic WXS Illumina GAIIx CD8A 925 broad.mit.edu hg19 2 87015654 87015654 + Missense_Mutation SNP G A TCGA-EJ-5501-01 Unknown Somatic WXS Illumina GAIIx CD8A 925 broad.mit.edu hg19 2 87017756 87017756 + Missense_Mutation SNP C G PR-04-1243 Unknown Somatic WGS Illumina GAIIx SMYD1 150572 broad.mit.edu hg19 2 88387456 88387456 + Missense_Mutation SNP C T P07-5036-Tumor Unknown Somatic WXS Illumina GAIIx THNSL2 55258 CPCGene hg19 2 88472748 88472748 + Missense_Mutation SNP G A CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 THNSL2 55258 CPCGene hg19 2 88472868 88472868 + Missense_Mutation SNP C A CPCG0324-F1 Unknown Somatic WXS Illumina HiSeq 2500 EIF2AK3 9451 CPCGene hg19 2 88890084 88890084 + Missense_Mutation SNP C T CPCG0409-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAL 4118 broad.mit.edu hg19 2 95713710 95713710 + Missense_Mutation SNP G A TCGA-EJ-5527-01 Unknown Somatic WXS Illumina GAIIx MAL 4118 broad.mit.edu hg19 2 95713830 95713830 + Missense_Mutation SNP A G P04-2740-Tumor Unknown Somatic WXS Illumina GAIIx KCNIP3 30818 broad.mit.edu hg19 2 96040917 96040917 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx GPAT2 150763 broad.mit.edu hg19 2 96690175 96690175 + Missense_Mutation SNP C T PR-06-3199 Unknown Somatic WGS Illumina GAIIx DUSP2 1844 CPCGene hg19 2 96811003 96811003 + Missense_Mutation SNP C T CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 SNRNP200 23020 CPCGene hg19 2 96944075 96944075 + Missense_Mutation SNP T C CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 NCAPH 23397 broad.mit.edu hg19 2 97019969 97019969 + Missense_Mutation SNP G T TCGA-J4-A67N-01 Unknown Somatic WXS Illumina GAIIx NCAPH 23397 broad.mit.edu hg19 2 97030219 97030219 + Missense_Mutation SNP T G P05-620 Unknown Somatic WGS Illumina GAIIx KANSL3 55683 broad.mit.edu hg19 2 97276875 97276875 + Missense_Mutation SNP C G TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx ANKRD36B 57730 CPCGene hg19 2 98195395 98195395 + Missense_Mutation SNP A T CPCG0387-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZAP70 7535 broad.mit.edu hg19 2 98351131 98351131 + Missense_Mutation SNP C T TCGA-FC-7708-01 Unknown Somatic WXS Illumina GAIIx TMEM131 23505 broad.mit.edu hg19 2 98382628 98382628 + Missense_Mutation SNP C A P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx VWA3B 200403 broad.mit.edu hg19 2 98797510 98797510 + Missense_Mutation SNP G A PR-2525 Unknown Somatic WGS Illumina GAIIx CNGA3 1261 CPCGene hg19 2 99012557 99012557 + Missense_Mutation SNP G T CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 CNGA3 1261 broad.mit.edu hg19 2 99012981 99012981 + Missense_Mutation SNP A G TCGA-EJ-5509-01 Unknown Somatic WXS Illumina GAIIx CNGA3 1261 broad.mit.edu hg19 2 99013489 99013489 + Missense_Mutation SNP C T P00-000450-Tumor Unknown Somatic WXS Illumina GAIIx INPP4A 3631 CPCGene hg19 2 99149906 99149906 + Missense_Mutation SNP C A CPCG0183-F1 Unknown Somatic WXS Illumina HiSeq 2500 REV1 51455 CPCGene hg19 2 100017791 100017791 + Missense_Mutation SNP C T CPCG0348-F1 Unknown Somatic WXS Illumina HiSeq 2500 REV1 51455 broad.mit.edu hg19 2 100058807 100058807 + Missense_Mutation SNP T A PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx AFF3 3899 broad.mit.edu hg19 2 100203740 100203740 + Missense_Mutation SNP A G TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx LONRF2 164832 CPCGene hg19 2 100911951 100911951 + Missense_Mutation SNP G A CPCG0341-F1 Unknown Somatic WXS Illumina HiSeq 2500 LONRF2 164832 broad.mit.edu hg19 2 100925664 100925664 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx CREG2 200407 broad.mit.edu hg19 2 102003787 102003787 + Missense_Mutation SNP C G TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx TGFBRAP1 9392 broad.mit.edu hg19 2 105924582 105924582 + Missense_Mutation SNP C T PR-04-3347-Tumor Unknown Somatic WXS Illumina GAIIx NCK2 8440 broad.mit.edu hg19 2 106497794 106497794 + Missense_Mutation SNP G A TCGA-HC-8261-01 Unknown Somatic WXS Illumina GAIIx GCC2 9648 broad.mit.edu hg19 2 109086210 109086210 + Missense_Mutation SNP G T TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx GCC2 9648 CPCGene hg19 2 109104262 109104262 + Missense_Mutation SNP C T CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 BCL2L11 10018 broad.mit.edu hg19 2 111907691 111907691 + Missense_Mutation SNP T C TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx BCL2L11 10018 broad.mit.edu hg19 2 111907691 111907691 + Missense_Mutation SNP T G TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx MERTK 10461 broad.mit.edu hg19 2 112702569 112702569 + Missense_Mutation SNP C A TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx MERTK 10461 CPCGene hg19 2 112702571 112702571 + Missense_Mutation SNP T A CPCG0182-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMEM87B 84910 CPCGene hg19 2 112847215 112847215 + Missense_Mutation SNP A G CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 FBLN7 129804 CPCGene hg19 2 112933416 112933416 + Missense_Mutation SNP G T CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZC3H6 376940 broad.mit.edu hg19 2 113089653 113089653 + Missense_Mutation SNP A T P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx POLR1B 84172 CPCGene hg19 2 113305122 113305122 + Missense_Mutation SNP T C CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 POLR1B 84172 broad.mit.edu hg19 2 113332905 113332905 + Missense_Mutation SNP C G TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx PSD4 23550 CPCGene hg19 2 113940279 113940279 + Missense_Mutation SNP C T CPCG0003-F1 Unknown Somatic WXS Illumina HiSeq 2500 PSD4 23550 broad.mit.edu hg19 2 113942610 113942610 + Missense_Mutation SNP G T TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx DPP10 57628 broad.mit.edu hg19 2 116497321 116497321 + Missense_Mutation SNP T C TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx DPP10 57628 broad.mit.edu hg19 2 116520170 116520170 + Missense_Mutation SNP C T TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx DPP10 57628 CPCGene hg19 2 116572475 116572475 + Missense_Mutation SNP G T CPCG0078-F1 Unknown Somatic WXS Illumina HiSeq 2500 DPP10 57628 broad.mit.edu hg19 2 116598397 116598397 + Missense_Mutation SNP C G P08-716 Unknown Somatic WGS Illumina GAIIx DDX18 8886 broad.mit.edu hg19 2 118586933 118586933 + Missense_Mutation SNP A G PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx CCDC93 54520 broad.mit.edu hg19 2 118715997 118715997 + Missense_Mutation SNP G C TCGA-G9-6363-01 Unknown Somatic WXS Illumina GAIIx MARCO 8685 broad.mit.edu hg19 2 119726816 119726816 + Missense_Mutation SNP G A TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx C1QL2 165257 CPCGene hg19 2 119915626 119915626 + Missense_Mutation SNP T A CPCG0356-F1 Unknown Somatic WXS Illumina HiSeq 2500 SCTR 6344 broad.mit.edu hg19 2 120221820 120221820 + Missense_Mutation SNP C T P04-594-Tumor Unknown Somatic WXS Illumina GAIIx CFAP221 200373 broad.mit.edu hg19 2 120383174 120383174 + Missense_Mutation SNP C T P05-620 Unknown Somatic WGS Illumina GAIIx PTPN4 5775 broad.mit.edu hg19 2 120567452 120567452 + Missense_Mutation SNP C G TCGA-VN-A88O-01 Unknown Somatic WXS Illumina GAIIx PTPN4 5775 CPCGene hg19 2 120712899 120712899 + Missense_Mutation SNP T G CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 EPB41L5 57669 broad.mit.edu hg19 2 120847945 120847945 + Missense_Mutation SNP T G TCGA-YL-A8HO-01 Unknown Somatic WXS Illumina GAIIx RALB 5899 broad.mit.edu hg19 2 121050805 121050805 + Missense_Mutation SNP A G PR-02-2072-Tumor Unknown Somatic WXS Illumina GAIIx GLI2 2736 broad.mit.edu hg19 2 121746844 121746844 + Missense_Mutation SNP C T TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx TFCP2L1 29842 broad.mit.edu hg19 2 122007205 122007205 + Missense_Mutation SNP C T TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx CLASP1 23332 broad.mit.edu hg19 2 122144788 122144788 + Missense_Mutation SNP G A TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx CLASP1 23332 broad.mit.edu hg19 2 122168446 122168446 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx CNTNAP5 129684 broad.mit.edu hg19 2 125192103 125192103 + Missense_Mutation SNP A G TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx CNTNAP5 129684 broad.mit.edu hg19 2 125521376 125521376 + Missense_Mutation SNP C T TCGA-EJ-5530-01 Unknown Somatic WXS Illumina GAIIx CNTNAP5 129684 broad.mit.edu hg19 2 125521571 125521571 + Missense_Mutation SNP G A TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx CNTNAP5 129684 broad.mit.edu hg19 2 125547651 125547651 + Missense_Mutation SNP G A TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx CNTNAP5 129684 CPCGene hg19 2 125555898 125555898 + Splice_Site SNP G T CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 CNTNAP5 129684 broad.mit.edu hg19 2 125660460 125660460 + Missense_Mutation SNP G A PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx CNTNAP5 129684 broad.mit.edu hg19 2 125671862 125671862 + Missense_Mutation SNP C T P06-1125-Tumor Unknown Somatic WXS Illumina GAIIx GPR17 2840 broad.mit.edu hg19 2 128408804 128408804 + Missense_Mutation SNP G A TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx WDR33 55339 broad.mit.edu hg19 2 128477088 128477088 + Missense_Mutation SNP C A TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx WDR33 55339 CPCGene hg19 2 128480912 128480912 + Missense_Mutation SNP C T CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCDC74B 91409 CPCGene hg19 2 130902386 130902386 + Missense_Mutation SNP G A CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 PTPN18 26469 EMBL hg19 2 131116461 131116461 + Missense_Mutation SNP G T EOPC-04 Unknown Somatic WGS Illumina HiSeq2000 AMER3 205147 broad.mit.edu hg19 2 131520257 131520257 + Missense_Mutation SNP G T TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx AMER3 205147 broad.mit.edu hg19 2 131520858 131520858 + Missense_Mutation SNP C T TCGA-G9-6384-01 Unknown Somatic WXS Illumina GAIIx AMER3 205147 broad.mit.edu hg19 2 131521766 131521766 + Missense_Mutation SNP G A TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx NCKAP5 344148 broad.mit.edu hg19 2 133540002 133540002 + Missense_Mutation SNP G A TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx NCKAP5 344148 broad.mit.edu hg19 2 133636429 133636429 + Missense_Mutation SNP G T TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx MGAT5 4249 broad.mit.edu hg19 2 135170535 135170535 + Missense_Mutation SNP C A PR-08-4154 Unknown Somatic WGS Illumina GAIIx MAP3K19 80122 broad.mit.edu hg19 2 135756415 135756415 + Missense_Mutation SNP T G PR-09-3566-Tumor Unknown Somatic WXS Illumina GAIIx LCT 3938 broad.mit.edu hg19 2 136558282 136558282 + Missense_Mutation SNP G A TCGA-J4-A67T-01 Unknown Somatic WXS Illumina GAIIx THSD7B 80731 CPCGene hg19 2 137917905 137917905 + Missense_Mutation SNP C A CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 THSD7B 80731 broad.mit.edu hg19 2 137928505 137928505 + Missense_Mutation SNP C T PR-STID0000002872 Unknown Somatic WGS Illumina GAIIx THSD7B 80731 broad.mit.edu hg19 2 138033555 138033555 + Missense_Mutation SNP C T TCGA-G9-6354-01 Unknown Somatic WXS Illumina GAIIx THSD7B 80731 broad.mit.edu hg19 2 138033591 138033591 + Missense_Mutation SNP C A PR-09-5702-Tumor Unknown Somatic WXS Illumina GAIIx THSD7B 80731 broad.mit.edu hg19 2 138163182 138163182 + Splice_Site SNP G C PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx LRP1B 53353 CPCGene hg19 2 140992397 140992397 + Missense_Mutation SNP G T CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 LRP1B 53353 broad.mit.edu hg19 2 141460073 141460073 + Missense_Mutation SNP G T TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx LRP1B 53353 broad.mit.edu hg19 2 141473639 141473639 + Missense_Mutation SNP A C TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx LRP1B 53353 CPCGene hg19 2 141680556 141680556 + Missense_Mutation SNP G T CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 LRP1B 53353 broad.mit.edu hg19 2 141680622 141680622 + Missense_Mutation SNP T G TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx LRP1B 53353 broad.mit.edu hg19 2 141707967 141707967 + Missense_Mutation SNP G A PR-08-784 Unknown Somatic WGS Illumina GAIIx LRP1B 53353 broad.mit.edu hg19 2 141739814 141739814 + Missense_Mutation SNP G A TCGA-J4-A83K-01 Unknown Somatic WXS Illumina GAIIx LRP1B 53353 broad.mit.edu hg19 2 141751669 141751669 + Missense_Mutation SNP C G PR-02-254-Tumor Unknown Somatic WXS Illumina GAIIx LRP1B 53353 broad.mit.edu hg19 2 141945999 141945999 + Missense_Mutation SNP G C TCGA-2A-A8W1-01 Unknown Somatic WXS Illumina GAIIx GTDC1 79712 broad.mit.edu hg19 2 144714783 144714783 + Missense_Mutation SNP T A TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx ZEB2 9839 broad.mit.edu hg19 2 145147255 145147255 + Missense_Mutation SNP G A P07-144 Unknown Somatic WGS Illumina GAIIx ZEB2 9839 broad.mit.edu hg19 2 145147522 145147522 + Missense_Mutation SNP C T PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx ZEB2 9839 broad.mit.edu hg19 2 145162525 145162525 + Missense_Mutation SNP T C TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx KIF5C 3800 broad.mit.edu hg19 2 149837906 149837906 + Missense_Mutation SNP A C P07-837 Unknown Somatic WGS Illumina GAIIx RIF1 55183 broad.mit.edu hg19 2 152322042 152322042 + Missense_Mutation SNP A C TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx NEB 4703 CPCGene hg19 2 152387581 152387581 + Missense_Mutation SNP G T CPCG0087-F1 Unknown Somatic WXS Illumina HiSeq 2500 NEB 4703 broad.mit.edu hg19 2 152584292 152584292 + Missense_Mutation SNP C T P04-2740-Tumor Unknown Somatic WXS Illumina GAIIx CACNB4 785 broad.mit.edu hg19 2 152732968 152732968 + Missense_Mutation SNP C A TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx PRPF40A 55660 broad.mit.edu hg19 2 153533070 153533070 + Missense_Mutation SNP T A PR-05-3595 Unknown Somatic WGS Illumina GAIIx RPRM 56475 broad.mit.edu hg19 2 154334941 154334941 + Missense_Mutation SNP C T PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx LOC100144595 100144595 CPCGene hg19 2 155294123 155294123 + Missense_Mutation SNP C T CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 KCNJ3 3760 broad.mit.edu hg19 2 155555800 155555800 + Missense_Mutation SNP C T PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx GPD2 2820 CPCGene hg19 2 157425403 157425403 + Missense_Mutation SNP C T CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 GALNT5 11227 CPCGene hg19 2 158157461 158157461 + Missense_Mutation SNP G T CPCG0078-F1 Unknown Somatic WXS Illumina HiSeq 2500 GALNT5 11227 broad.mit.edu hg19 2 158162294 158162294 + Missense_Mutation SNP A T P04-47-Tumor Unknown Somatic WXS Illumina GAIIx CYTIP 9595 broad.mit.edu hg19 2 158272196 158272196 + Missense_Mutation SNP C T TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx CYTIP 9595 broad.mit.edu hg19 2 158272362 158272362 + Missense_Mutation SNP G A TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx BAZ2B 29994 broad.mit.edu hg19 2 160287661 160287661 + Missense_Mutation SNP T C TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx BAZ2B 29994 EMBL hg19 2 160304798 160304798 + Missense_Mutation SNP G A EOPC-04 Unknown Somatic WGS Illumina HiSeq2000 LY75 4065 broad.mit.edu hg19 2 160665083 160665083 + Splice_Site SNP C A TCGA-VN-A88O-01 Unknown Somatic WXS Illumina GAIIx LY75 4065 CPCGene hg19 2 160755306 160755306 + Missense_Mutation SNP C T CPCG0087-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC4A10 57282 broad.mit.edu hg19 2 162804174 162804174 + Missense_Mutation SNP T C TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx FAP 2191 broad.mit.edu hg19 2 163083065 163083065 + Missense_Mutation SNP G A P07-684-Tumor Unknown Somatic WXS Illumina GAIIx KCNH7 90134 broad.mit.edu hg19 2 163279881 163279881 + Missense_Mutation SNP C T TCGA-VP-A87C-01 Unknown Somatic WXS Illumina GAIIx KCNH7 90134 broad.mit.edu hg19 2 163302757 163302757 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx FIGN 55137 broad.mit.edu hg19 2 164467945 164467945 + Missense_Mutation SNP C T TCGA-EJ-5522-01 Unknown Somatic WXS Illumina GAIIx SCN3A 6328 CPCGene hg19 2 165970324 165970324 + Splice_Site SNP A G CPCG0154-F1 Unknown Somatic WXS Illumina HiSeq 2500 SCN3A 6328 broad.mit.edu hg19 2 166012312 166012312 + Missense_Mutation SNP C T P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx SCN3A 6328 broad.mit.edu hg19 2 166020180 166020180 + Missense_Mutation SNP C T TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx SCN3A 6328 broad.mit.edu hg19 2 166027030 166027030 + Missense_Mutation SNP G T P07-5021 Unknown Somatic WGS Illumina GAIIx SCN2A 6326 broad.mit.edu hg19 2 166229841 166229841 + Missense_Mutation SNP G A TCGA-EJ-7794-01 Unknown Somatic WXS Illumina GAIIx SCN1A 6323 CPCGene hg19 2 166848644 166848644 + Missense_Mutation SNP A G CPCG0237-F1 Unknown Somatic WXS Illumina HiSeq 2500 SCN1A 6323 broad.mit.edu hg19 2 166896014 166896014 + Missense_Mutation SNP G A P07-837 Unknown Somatic WGS Illumina GAIIx SCN1A 6323 CPCGene hg19 2 166898867 166898867 + Missense_Mutation SNP A G CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 SCN1A 6323 broad.mit.edu hg19 2 166900370 166900370 + Missense_Mutation SNP G A TCGA-EJ-7781-01 Unknown Somatic WXS Illumina GAIIx SCN1A 6323 CPCGene hg19 2 166901755 166901755 + Missense_Mutation SNP G T CPCG0154-F1 Unknown Somatic WXS Illumina HiSeq 2500 SCN1A 6323 broad.mit.edu hg19 2 166911171 166911171 + Missense_Mutation SNP G A P03-1906-Tumor Unknown Somatic WXS Illumina GAIIx SCN9A 6335 broad.mit.edu hg19 2 167089856 167089856 + Missense_Mutation SNP T A TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx SCN7A 6332 broad.mit.edu hg19 2 167334115 167334115 + Missense_Mutation SNP T C P07-5021 Unknown Somatic WGS Illumina GAIIx XIRP2 129446 broad.mit.edu hg19 2 168099576 168099576 + Missense_Mutation SNP C T PR-2740-Tumor Unknown Somatic WXS Illumina GAIIx XIRP2 129446 CPCGene hg19 2 168102751 168102751 + Missense_Mutation SNP G T CPCG0263-F1 Unknown Somatic WXS Illumina HiSeq 2500 XIRP2 129446 broad.mit.edu hg19 2 168104310 168104310 + Missense_Mutation SNP G T PR-08-556 Unknown Somatic WGS Illumina GAIIx CERS6 253782 broad.mit.edu hg19 2 169574447 169574447 + Missense_Mutation SNP C T PR-09-2517-Tumor Unknown Somatic WXS Illumina GAIIx LRP2 4036 broad.mit.edu hg19 2 170136033 170136033 + Missense_Mutation SNP G A TCGA-HC-7747-01 Unknown Somatic WXS Illumina GAIIx PPIG 9360 broad.mit.edu hg19 2 170493058 170493058 + Missense_Mutation SNP A G TCGA-HC-7748-01 Unknown Somatic WXS Illumina GAIIx UBR3 130507 broad.mit.edu hg19 2 170930058 170930058 + Missense_Mutation SNP A G TCGA-EJ-5494-01 Unknown Somatic WXS Illumina GAIIx ITGA6 3655 broad.mit.edu hg19 2 173330368 173330368 + Missense_Mutation SNP C A TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx RAPGEF4 11069 broad.mit.edu hg19 2 173832003 173832003 + Missense_Mutation SNP C T TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx SP9 100131390 broad.mit.edu hg19 2 175202029 175202029 + Missense_Mutation SNP C A TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx WIPF1 7456 CPCGene hg19 2 175437078 175437078 + Missense_Mutation SNP A C CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 CHRNA1 1134 broad.mit.edu hg19 2 175613416 175613416 + Missense_Mutation SNP T A P05-620 Unknown Somatic WGS Illumina GAIIx CHRNA1 1134 broad.mit.edu hg19 2 175622727 175622727 + Missense_Mutation SNP G A PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx HOXD10 3236 broad.mit.edu hg19 2 176981857 176981857 + Missense_Mutation SNP C T TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx HOXD3 3232 broad.mit.edu hg19 2 177034058 177034058 + Missense_Mutation SNP C T TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx AGPS 8540 CPCGene hg19 2 178362466 178362466 + Missense_Mutation SNP C T CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 OSBPL6 114880 CPCGene hg19 2 179259110 179259110 + Missense_Mutation SNP C T CPCG0196-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTN 7273 broad.mit.edu hg19 2 179398132 179398132 + Missense_Mutation SNP A G TCGA-HC-A6AP-01 Unknown Somatic WXS Illumina GAIIx TTN 7273 CPCGene hg19 2 179398629 179398629 + Missense_Mutation SNP C T CPCG0354-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTN 7273 broad.mit.edu hg19 2 179402560 179402560 + Missense_Mutation SNP A G TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx TTN 7273 broad.mit.edu hg19 2 179412752 179412752 + Missense_Mutation SNP A G TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx TTN 7273 CPCGene hg19 2 179433389 179433389 + Missense_Mutation SNP G A CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTN 7273 CPCGene hg19 2 179434390 179434390 + Missense_Mutation SNP C G CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTN 7273 broad.mit.edu hg19 2 179435374 179435374 + Missense_Mutation SNP C G TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx TTN 7273 CPCGene hg19 2 179440906 179440906 + Missense_Mutation SNP G A CPCG0090-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTN 7273 CPCGene hg19 2 179443830 179443830 + Missense_Mutation SNP T G CPCG0124-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTN 7273 broad.mit.edu hg19 2 179449103 179449103 + Missense_Mutation SNP T C P08-1541 Unknown Somatic WGS Illumina GAIIx TTN 7273 broad.mit.edu hg19 2 179458148 179458148 + Missense_Mutation SNP G A PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx TTN 7273 broad.mit.edu hg19 2 179463271 179463271 + Missense_Mutation SNP C T TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx TTN 7273 broad.mit.edu hg19 2 179472383 179472383 + Missense_Mutation SNP C T TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx TTN 7273 broad.mit.edu hg19 2 179476287 179476287 + Missense_Mutation SNP T G TCGA-VP-A87J-01 Unknown Somatic WXS Illumina GAIIx TTN 7273 broad.mit.edu hg19 2 179476561 179476561 + Missense_Mutation SNP C T PR-03-3125 Unknown Somatic WGS Illumina GAIIx TTN 7273 CPCGene hg19 2 179499108 179499108 + Missense_Mutation SNP G A CPCG0232-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTN 7273 broad.mit.edu hg19 2 179516426 179516426 + Missense_Mutation SNP C T TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx TTN 7273 CPCGene hg19 2 179545048 179545048 + Missense_Mutation SNP C A CPCG0191-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTN 7273 CPCGene hg19 2 179587536 179587536 + Missense_Mutation SNP G A CPCG0355-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTN 7273 broad.mit.edu hg19 2 179594623 179594623 + Missense_Mutation SNP A T TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx TTN 7273 broad.mit.edu hg19 2 179605764 179605764 + Missense_Mutation SNP C G TCGA-EJ-7781-01 Unknown Somatic WXS Illumina GAIIx TTN 7273 broad.mit.edu hg19 2 179623770 179623770 + Missense_Mutation SNP G A TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx TTN 7273 broad.mit.edu hg19 2 179648886 179648886 + Missense_Mutation SNP C T TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx SESTD1 91404 CPCGene hg19 2 180056540 180056540 + Missense_Mutation SNP A G CPCG0123-F1 Unknown Somatic WXS Illumina HiSeq 2500 ITGA4 3676 broad.mit.edu hg19 2 182376434 182376434 + Missense_Mutation SNP T C TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx SSFA2 6744 broad.mit.edu hg19 2 182766660 182766660 + Missense_Mutation SNP C T P07-837 Unknown Somatic WGS Illumina GAIIx FSIP2 401024 broad.mit.edu hg19 2 186657818 186657818 + Missense_Mutation SNP G C TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx FSIP2 401024 CPCGene hg19 2 186661651 186661651 + Missense_Mutation SNP A G CPCG0413-F1 Unknown Somatic WXS Illumina HiSeq 2500 FSIP2 401024 broad.mit.edu hg19 2 186670913 186670913 + Missense_Mutation SNP T A P08-217 Unknown Somatic WGS Illumina GAIIx FAM171B 165215 CPCGene hg19 2 187559047 187559047 + Missense_Mutation SNP G A CPCG0232-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAM171B 165215 broad.mit.edu hg19 2 187627272 187627272 + Missense_Mutation SNP A T TCGA-EJ-5509-01 Unknown Somatic WXS Illumina GAIIx ZSWIM2 151112 broad.mit.edu hg19 2 187698678 187698678 + Missense_Mutation SNP G A P05-3859-Tumor Unknown Somatic WXS Illumina GAIIx ZSWIM2 151112 broad.mit.edu hg19 2 187703805 187703805 + Missense_Mutation SNP G A PR-04-639-Tumor Unknown Somatic WXS Illumina GAIIx COL5A2 1290 broad.mit.edu hg19 2 189898829 189898829 + Missense_Mutation SNP G A P08-217 Unknown Somatic WGS Illumina GAIIx COL5A2 1290 CPCGene hg19 2 189910540 189910540 + Missense_Mutation SNP G T CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 ASNSD1 54529 CPCGene hg19 2 190531243 190531243 + Missense_Mutation SNP C A CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 ORMDL1 94101 broad.mit.edu hg19 2 190640394 190640394 + Missense_Mutation SNP G T TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx SF3B1 23451 broad.mit.edu hg19 2 198265579 198265579 + Missense_Mutation SNP C T TCGA-G9-6347-01 Unknown Somatic WXS Illumina GAIIx SF3B1 23451 broad.mit.edu hg19 2 198266711 198266711 + Missense_Mutation SNP T C TCGA-VP-A87C-01 Unknown Somatic WXS Illumina GAIIx SF3B1 23451 CPCGene hg19 2 198266834 198266834 + Missense_Mutation SNP T C CPCG0001-F1 Unknown Somatic WXS Illumina HiSeq 2500 SF3B1 23451 CPCGene hg19 2 198267481 198267481 + Missense_Mutation SNP T C CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 SF3B1 23451 broad.mit.edu hg19 2 198267739 198267739 + Missense_Mutation SNP C T TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx SF3B1 23451 broad.mit.edu hg19 2 198273243 198273243 + Missense_Mutation SNP T C P07-5021 Unknown Somatic WGS Illumina GAIIx HSPD1 3329 broad.mit.edu hg19 2 198363406 198363406 + Missense_Mutation SNP C T TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx HSPD1 3329 broad.mit.edu hg19 2 198363501 198363501 + Missense_Mutation SNP C T TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx HSPD1 3329 broad.mit.edu hg19 2 198363501 198363501 + Missense_Mutation SNP C T TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx SATB2 23314 broad.mit.edu hg19 2 200233398 200233398 + Missense_Mutation SNP A T TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx AOX1 316 broad.mit.edu hg19 2 201477354 201477354 + Missense_Mutation SNP G T PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx FAM126B 285172 broad.mit.edu hg19 2 201846109 201846109 + Missense_Mutation SNP G A TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx CASP8 841 CPCGene hg19 2 202149893 202149893 + Missense_Mutation SNP C T CPCG0410-F1 Unknown Somatic WXS Illumina HiSeq 2500 ALS2CR11 151254 CPCGene hg19 2 202357325 202357325 + Missense_Mutation SNP T A CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 ALS2CR11 151254 CPCGene hg19 2 202358477 202358477 + Missense_Mutation SNP A G CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 FZD7 8324 broad.mit.edu hg19 2 202899587 202899587 + Missense_Mutation SNP C G TCGA-YL-A8HO-01 Unknown Somatic WXS Illumina GAIIx LOC100652824 0 CPCGene hg19 2 203052896 203052896 + Missense_Mutation SNP G T CPCG0414-F1 Unknown Somatic WXS Illumina HiSeq 2500 BMPR2 659 broad.mit.edu hg19 2 203383680 203383680 + Missense_Mutation SNP G C TCGA-EJ-7314-01 Unknown Somatic WXS Illumina GAIIx FAM117B 150864 CPCGene hg19 2 203622012 203622012 + Missense_Mutation SNP C G CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 NBEAL1 65065 CPCGene hg19 2 204036673 204036673 + Missense_Mutation SNP C G CPCG0259-F1 Unknown Somatic WXS Illumina HiSeq 2500 RAPH1 65059 broad.mit.edu hg19 2 204304794 204304794 + Missense_Mutation SNP A G TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx NRP2 8828 broad.mit.edu hg19 2 206562279 206562279 + Missense_Mutation SNP G A TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx NRP2 8828 broad.mit.edu hg19 2 206587430 206587430 + Missense_Mutation SNP A G P03-2345 Unknown Somatic WGS Illumina GAIIx NRP2 8828 broad.mit.edu hg19 2 206614470 206614470 + Missense_Mutation SNP C T PR-04-1243 Unknown Somatic WGS Illumina GAIIx NDUFS1 4719 CPCGene hg19 2 207012268 207012268 + Missense_Mutation SNP T A CPCG0262-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZDBF2 57683 broad.mit.edu hg19 2 207170939 207170939 + Missense_Mutation SNP C T TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx LOC200726 200726 CPCGene hg19 2 207508995 207508995 + Missense_Mutation SNP G A CPCG0047-F1 Unknown Somatic WXS Illumina HiSeq 2500 MDH1B 130752 broad.mit.edu hg19 2 207621677 207621677 + Missense_Mutation SNP G A P09-37 Unknown Somatic WGS Illumina GAIIx IDH1 3417 broad.mit.edu hg19 2 209113112 209113112 + Missense_Mutation SNP C T PR-05-3595 Unknown Somatic WGS Illumina GAIIx IDH1 3417 broad.mit.edu hg19 2 209113113 209113113 + Missense_Mutation SNP G C TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx IDH1 3417 broad.mit.edu hg19 2 209113151 209113151 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx PIKFYVE 200576 broad.mit.edu hg19 2 209204774 209204774 + Missense_Mutation SNP A C TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx MAP2 4133 broad.mit.edu hg19 2 210558966 210558966 + Missense_Mutation SNP G T P09-37 Unknown Somatic WGS Illumina GAIIx UNC80 285175 EMBL hg19 2 210640622 210640622 + Missense_Mutation SNP C T EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 UNC80 285175 broad.mit.edu hg19 2 210840995 210840995 + Missense_Mutation SNP T G TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx UNC80 285175 broad.mit.edu hg19 2 210849595 210849595 + Missense_Mutation SNP C T PR-06-1749 Unknown Somatic WGS Illumina GAIIx KANSL1L 151050 broad.mit.edu hg19 2 210993896 210993896 + Missense_Mutation SNP A G TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx ACADL 33 broad.mit.edu hg19 2 211057572 211057572 + Missense_Mutation SNP C G P04-47-Tumor Unknown Somatic WXS Illumina GAIIx LANCL1 10314 broad.mit.edu hg19 2 211341083 211341083 + Missense_Mutation SNP T C TCGA-G9-6498-01 Unknown Somatic WXS Illumina GAIIx CPS1 1373 broad.mit.edu hg19 2 211438054 211438054 + Missense_Mutation SNP A T TCGA-QU-A6IO-01 Unknown Somatic WXS Illumina GAIIx CPS1 1373 broad.mit.edu hg19 2 211541794 211541794 + Missense_Mutation SNP C T TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx ERBB4 2066 broad.mit.edu hg19 2 212288967 212288967 + Missense_Mutation SNP G A TCGA-EJ-7315-01 Unknown Somatic WXS Illumina GAIIx SPAG16 79582 broad.mit.edu hg19 2 214727270 214727270 + Missense_Mutation SNP G T P07-684-Tumor Unknown Somatic WXS Illumina GAIIx SPAG16 79582 broad.mit.edu hg19 2 214794778 214794778 + Missense_Mutation SNP C T TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx ABCA12 26154 CPCGene hg19 2 215876304 215876304 + Missense_Mutation SNP A C CPCG0374-F1 Unknown Somatic WXS Illumina HiSeq 2500 FN1 2335 broad.mit.edu hg19 2 216229709 216229709 + Splice_Site SNP C T PR-2762-Tumor Unknown Somatic WXS Illumina GAIIx FN1 2335 CPCGene hg19 2 216237013 216237013 + Missense_Mutation SNP G T CPCG0269-F1 Unknown Somatic WXS Illumina HiSeq 2500 XRCC5 7520 broad.mit.edu hg19 2 217012842 217012842 + Missense_Mutation SNP C G PR-STID0000002872 Unknown Somatic WGS Illumina GAIIx XRCC5 7520 CPCGene hg19 2 217054990 217054990 + Missense_Mutation SNP C T CPCG0355-F1 Unknown Somatic WXS Illumina HiSeq 2500 TNS1 7145 broad.mit.edu hg19 2 218679689 218679689 + Missense_Mutation SNP A C TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx TNS1 7145 CPCGene hg19 2 218682756 218682756 + Missense_Mutation SNP C T CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 RUFY4 285180 broad.mit.edu hg19 2 218940309 218940309 + Missense_Mutation SNP C T TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx GPBAR1 151306 broad.mit.edu hg19 2 219127825 219127825 + Missense_Mutation SNP G C P09-37 Unknown Somatic WGS Illumina GAIIx CTDSP1 58190 CPCGene hg19 2 219268010 219268010 + Missense_Mutation SNP T A CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 USP37 57695 broad.mit.edu hg19 2 219341590 219341590 + Missense_Mutation SNP G T TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx USP37 57695 broad.mit.edu hg19 2 219411691 219411691 + Missense_Mutation SNP A T PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx ZNF142 7701 broad.mit.edu hg19 2 219505430 219505430 + Missense_Mutation SNP G C TCGA-G9-6338-01 Unknown Somatic WXS Illumina GAIIx CYP27A1 1593 broad.mit.edu hg19 2 219647124 219647124 + Missense_Mutation SNP C G PR-05-3595 Unknown Somatic WGS Illumina GAIIx PRKAG3 53632 CPCGene hg19 2 219695620 219695620 + Missense_Mutation SNP C T CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 FEV 54738 CPCGene hg19 2 219846652 219846652 + Missense_Mutation SNP C G CPCG0362-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCDC108 0 broad.mit.edu hg19 2 219868757 219868757 + Missense_Mutation SNP C T P03-1426 Unknown Somatic WGS Illumina GAIIx CCDC108 0 broad.mit.edu hg19 2 219884316 219884316 + Missense_Mutation SNP G A P07-5036-Tumor Unknown Somatic WXS Illumina GAIIx CCDC108 0 broad.mit.edu hg19 2 219888790 219888790 + Missense_Mutation SNP A T TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx CCDC108 0 broad.mit.edu hg19 2 219892530 219892530 + Missense_Mutation SNP T C TCGA-G9-6343-01 Unknown Somatic WXS Illumina GAIIx CCDC108 0 broad.mit.edu hg19 2 219892592 219892592 + Missense_Mutation SNP G A TCGA-2A-A8VV-01 Unknown Somatic WXS Illumina GAIIx CCDC108 0 broad.mit.edu hg19 2 219892714 219892714 + Missense_Mutation SNP C T PR-04-1243 Unknown Somatic WGS Illumina GAIIx CCDC108 0 broad.mit.edu hg19 2 219900337 219900337 + Missense_Mutation SNP C G TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx ABCB6 10058 CPCGene hg19 2 220075013 220075013 + Missense_Mutation SNP T C CPCG0206-F1 Unknown Somatic WXS Illumina HiSeq 2500 ABCB6 10058 broad.mit.edu hg19 2 220081146 220081146 + Missense_Mutation SNP A G TCGA-G9-6378-01 Unknown Somatic WXS Illumina GAIIx ATG9A 79065 CPCGene hg19 2 220093154 220093154 + Splice_Site SNP A G CPCG0196-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPEG 10290 broad.mit.edu hg19 2 220331957 220331957 + Missense_Mutation SNP C T TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx ASIC4 55515 broad.mit.edu hg19 2 220396564 220396564 + Missense_Mutation SNP G A TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx OBSL1 23363 CPCGene hg19 2 220422699 220422699 + Missense_Mutation SNP G A CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 FARSB 10056 broad.mit.edu hg19 2 223499164 223499164 + Missense_Mutation SNP C T TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx FARSB 10056 broad.mit.edu hg19 2 223507640 223507640 + Missense_Mutation SNP C T TCGA-G9-6371-01 Unknown Somatic WXS Illumina GAIIx ACSL3 2181 CPCGene hg19 2 223806273 223806273 + Missense_Mutation SNP C T CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 MRPL44 65080 CPCGene hg19 2 224824649 224824649 + Missense_Mutation SNP A G CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 CUL3 8452 broad.mit.edu hg19 2 225362501 225362501 + Missense_Mutation SNP A C TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx CUL3 8452 CPCGene hg19 2 225371708 225371708 + Missense_Mutation SNP A C CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 CUL3 8452 broad.mit.edu hg19 2 225379456 225379456 + Missense_Mutation SNP T C TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx DOCK10 55619 broad.mit.edu hg19 2 225652092 225652092 + Missense_Mutation SNP T A TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx DOCK10 55619 CPCGene hg19 2 225658166 225658166 + Missense_Mutation SNP C T CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 DOCK10 55619 broad.mit.edu hg19 2 225717687 225717687 + Missense_Mutation SNP G T TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx NYAP2 57624 broad.mit.edu hg19 2 226446937 226446937 + Missense_Mutation SNP C T PR-STID0000003127 Unknown Somatic WGS Illumina GAIIx NYAP2 57624 broad.mit.edu hg19 2 226447087 226447087 + Missense_Mutation SNP G T TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx NYAP2 57624 CPCGene hg19 2 226447605 226447605 + Missense_Mutation SNP C T CPCG0191-F1 Unknown Somatic WXS Illumina HiSeq 2500 IRS1 3667 broad.mit.edu hg19 2 227662655 227662655 + Missense_Mutation SNP C T PR-03-3125 Unknown Somatic WGS Illumina GAIIx COL4A4 1286 CPCGene hg19 2 227919418 227919418 + Missense_Mutation SNP C T CPCG0263-F1 Unknown Somatic WXS Illumina HiSeq 2500 COL4A3 1285 CPCGene hg19 2 228118846 228118846 + Missense_Mutation SNP G A CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 AGFG1 3267 broad.mit.edu hg19 2 228389506 228389506 + Missense_Mutation SNP A C TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx DAW1 164781 CPCGene hg19 2 228754709 228754709 + Missense_Mutation SNP T G CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPHKAP 80309 broad.mit.edu hg19 2 228858269 228858269 + Missense_Mutation SNP G A TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx SPHKAP 80309 broad.mit.edu hg19 2 228883536 228883536 + Missense_Mutation SNP A G TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx TRIP12 9320 EMBL hg19 2 230693950 230693950 + Missense_Mutation SNP C T EOPC-04 Unknown Somatic WGS Illumina HiSeq2000 SP110 3431 broad.mit.edu hg19 2 231033887 231033887 + Missense_Mutation SNP G A TCGA-HC-7075-01 Unknown Somatic WGS Illumina GAIIx SP100 6672 CPCGene hg19 2 231307700 231307700 + Missense_Mutation SNP T A CPCG0354-F1 Unknown Somatic WXS Illumina HiSeq 2500 CAB39 51719 broad.mit.edu hg19 2 231663527 231663527 + Missense_Mutation SNP T C TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx CAB39 51719 CPCGene hg19 2 231683356 231683356 + Missense_Mutation SNP C T CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARMC9 80210 broad.mit.edu hg19 2 232135726 232135726 + Missense_Mutation SNP G C PR-3042 Unknown Somatic WGS Illumina GAIIx B3GNT7 93010 broad.mit.edu hg19 2 232262625 232262625 + Missense_Mutation SNP G A P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx DIS3L2 129563 broad.mit.edu hg19 2 232995475 232995475 + Missense_Mutation SNP T C PR-09-5702-Tumor Unknown Somatic WXS Illumina GAIIx ALPI 248 broad.mit.edu hg19 2 233322371 233322371 + Missense_Mutation SNP G A TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx ALPI 248 broad.mit.edu hg19 2 233322938 233322938 + Missense_Mutation SNP G A PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx CHRND 1144 broad.mit.edu hg19 2 233394757 233394757 + Missense_Mutation SNP G A TCGA-EJ-5521-01 Unknown Somatic WXS Illumina GAIIx EFHD1 80303 broad.mit.edu hg19 2 233546303 233546303 + Missense_Mutation SNP C T TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx EFHD1 80303 CPCGene hg19 2 233546311 233546311 + Missense_Mutation SNP C T CPCG0336-F1 Unknown Somatic WXS Illumina HiSeq 2500 INPP5D 3635 CPCGene hg19 2 234113050 234113050 + Missense_Mutation SNP C A CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 SAG 6295 CPCGene hg19 2 234231607 234231607 + Missense_Mutation SNP C T CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 UGT1A10 54575 broad.mit.edu hg19 2 234545494 234545494 + Missense_Mutation SNP T C P09-628 Unknown Somatic WGS Illumina GAIIx SPP2 6694 broad.mit.edu hg19 2 234959714 234959714 + Missense_Mutation SNP G A P06-1125-Tumor Unknown Somatic WXS Illumina GAIIx ARL4C 10123 broad.mit.edu hg19 2 235405080 235405080 + Missense_Mutation SNP T A TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx IQCA1 79781 broad.mit.edu hg19 2 237285745 237285745 + Splice_Site SNP C A TCGA-VN-A88N-01 Unknown Somatic WXS Illumina GAIIx COL6A3 1293 broad.mit.edu hg19 2 238275374 238275374 + Missense_Mutation SNP G A TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx COL6A3 1293 EMBL hg19 2 238280961 238280961 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 COL6A3 1293 broad.mit.edu hg19 2 238285512 238285512 + Missense_Mutation SNP C T P07-5318 Unknown Somatic WGS Illumina GAIIx COL6A3 1293 CPCGene hg19 2 238287550 238287550 + Missense_Mutation SNP G A CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 COL6A3 1293 broad.mit.edu hg19 2 238289893 238289893 + Missense_Mutation SNP G A TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx LRRFIP1 9208 broad.mit.edu hg19 2 238671963 238671963 + Missense_Mutation SNP G A TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx LRRFIP1 9208 CPCGene hg19 2 238672220 238672220 + Missense_Mutation SNP G A CPCG0057-F1 Unknown Somatic WXS Illumina HiSeq 2500 ESPNL 339768 CPCGene hg19 2 239037456 239037456 + Missense_Mutation SNP C T CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 KLHL30 377007 broad.mit.edu hg19 2 239049642 239049642 + Missense_Mutation SNP G C TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx ILKAP 80895 broad.mit.edu hg19 2 239096826 239096826 + Missense_Mutation SNP G A TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx PER2 8864 broad.mit.edu hg19 2 239176769 239176769 + Missense_Mutation SNP G A PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx TRAF3IP1 26146 broad.mit.edu hg19 2 239306145 239306145 + Missense_Mutation SNP G A PR-08-556 Unknown Somatic WGS Illumina GAIIx NDUFA10 4705 broad.mit.edu hg19 2 240961655 240961655 + Missense_Mutation SNP T C TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx OR6B2 389090 CPCGene hg19 2 240969062 240969062 + Missense_Mutation SNP G A CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRR21 643905 CPCGene hg19 2 240982116 240982116 + Missense_Mutation SNP C A CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 MYEOV2 0 CPCGene hg19 2 241069425 241069425 + Missense_Mutation SNP G T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANKMY1 51281 CPCGene hg19 2 241465852 241465852 + Missense_Mutation SNP C G CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 RNPEPL1 57140 CPCGene hg19 2 241508383 241508383 + Missense_Mutation SNP G C CPCG0183-F1 Unknown Somatic WXS Illumina HiSeq 2500 AQP12A 375318 EMBL hg19 2 241631732 241631732 + Missense_Mutation SNP C T EOPC-09 Unknown Somatic WGS Illumina HiSeq2000 KIF1A 547 broad.mit.edu hg19 2 241658545 241658545 + Missense_Mutation SNP C T TCGA-J4-A83N-01 Unknown Somatic WXS Illumina GAIIx KIF1A 547 broad.mit.edu hg19 2 241725859 241725859 + Missense_Mutation SNP G A TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx KIF1A 547 broad.mit.edu hg19 2 241726712 241726712 + Missense_Mutation SNP G A TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx C2 717 CPCGene hg19 2 241827928 241827928 + Missense_Mutation SNP C T CPCG0263-F1 Unknown Somatic WXS Illumina HiSeq 2500 PASK 23178 broad.mit.edu hg19 2 242079323 242079323 + Missense_Mutation SNP C G TCGA-EJ-5517-01 Unknown Somatic WXS Illumina GAIIx ANO7 50636 broad.mit.edu hg19 2 242138766 242138766 + Missense_Mutation SNP C T TCGA-EJ-5522-01 Unknown Somatic WXS Illumina GAIIx ANO7 50636 broad.mit.edu hg19 2 242142854 242142854 + Missense_Mutation SNP C T TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx THAP4 51078 CPCGene hg19 2 242524134 242524134 + Missense_Mutation SNP G T CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 NEU4 129807 broad.mit.edu hg19 2 242757411 242757411 + Missense_Mutation SNP C T TCGA-G9-6351-01 Unknown Somatic WXS Illumina GAIIx SOX12 6666 broad.mit.edu hg19 20 306756 306756 + Missense_Mutation SNP C G TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx RBCK1 10616 broad.mit.edu hg19 20 390561 390561 + Missense_Mutation SNP C T PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx ANGPT4 51378 broad.mit.edu hg19 20 861826 861826 + Missense_Mutation SNP C T TCGA-EJ-7330-01 Unknown Somatic WXS Illumina GAIIx C20 0 CPCGene hg19 20 1187729 1187729 + Missense_Mutation SNP C T CPCG0124-F1 Unknown Somatic WXS Illumina HiSeq 2500 SIRPB1 10326 broad.mit.edu hg19 20 1600530 1600530 + Missense_Mutation SNP G A TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx SIRPG 55423 broad.mit.edu hg19 20 1616124 1616124 + Missense_Mutation SNP G A PR-04-3347-Tumor Unknown Somatic WXS Illumina GAIIx TGM3 7053 broad.mit.edu hg19 20 2315791 2315791 + Missense_Mutation SNP G A PR-2761-Tumor Unknown Somatic WXS Illumina GAIIx TGM6 343641 broad.mit.edu hg19 20 2375900 2375900 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx TMC2 117532 CPCGene hg19 20 2592912 2592912 + Missense_Mutation SNP G T CPCG0210-F1 Unknown Somatic WXS Illumina HiSeq 2500 EBF4 57593 broad.mit.edu hg19 20 2688616 2688616 + Missense_Mutation SNP C T TCGA-EJ-8470-01 Unknown Somatic WXS Illumina GAIIx CPXM1 56265 CPCGene hg19 20 2774946 2774946 + Missense_Mutation SNP C T CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 CPXM1 56265 broad.mit.edu hg19 20 2776682 2776682 + Missense_Mutation SNP G A TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx VPS16 64601 broad.mit.edu hg19 20 2842496 2842496 + Missense_Mutation SNP G A TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx PTPRA 5786 broad.mit.edu hg19 20 3017847 3017847 + Missense_Mutation SNP T A TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx GNRH2 2797 broad.mit.edu hg19 20 3025420 3025420 + Missense_Mutation SNP G T PR-08-556 Unknown Somatic WGS Illumina GAIIx C20 0 broad.mit.edu hg19 20 3236652 3236652 + Missense_Mutation SNP C G TCGA-G9-6364-01 Unknown Somatic WXS Illumina GAIIx SIGLEC1 6614 broad.mit.edu hg19 20 3672817 3672817 + Missense_Mutation SNP G A TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx CENPB 1059 broad.mit.edu hg19 20 3766889 3766889 + Missense_Mutation SNP A T TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx PANK2 80025 broad.mit.edu hg19 20 3891312 3891312 + Missense_Mutation SNP G A P08-716 Unknown Somatic WGS Illumina GAIIx SMOX 54498 CPCGene hg19 20 4155735 4155735 + Missense_Mutation SNP G A CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADRA1D 146 broad.mit.edu hg19 20 4202306 4202306 + Missense_Mutation SNP C T TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx GPCPD1 56261 broad.mit.edu hg19 20 5556578 5556578 + Missense_Mutation SNP T C TCGA-J4-A83N-01 Unknown Somatic WXS Illumina GAIIx LRRN4 164312 broad.mit.edu hg19 20 6022379 6022379 + Missense_Mutation SNP G A PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx HAO1 54363 broad.mit.edu hg19 20 7875791 7875791 + Missense_Mutation SNP C T TCGA-EJ-7321-01 Unknown Somatic WXS Illumina GAIIx HAO1 54363 CPCGene hg19 20 7875811 7875811 + Missense_Mutation SNP C A CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 HAO1 54363 broad.mit.edu hg19 20 7894923 7894923 + Missense_Mutation SNP G A TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx HAO1 54363 CPCGene hg19 20 7921052 7921052 + Missense_Mutation SNP A C CPCG0183-F1 Unknown Somatic WXS Illumina HiSeq 2500 PLCB4 5332 broad.mit.edu hg19 20 9364983 9364983 + Missense_Mutation SNP C T TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx PAK7 0 CPCGene hg19 20 9546725 9546725 + Missense_Mutation SNP G A CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 MKKS 8195 broad.mit.edu hg19 20 10385987 10385987 + Missense_Mutation SNP A T PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx ESF1 51575 broad.mit.edu hg19 20 13763443 13763443 + Missense_Mutation SNP T C TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx KIF16B 55614 broad.mit.edu hg19 20 16360331 16360331 + Missense_Mutation SNP C T PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx KIF16B 55614 broad.mit.edu hg19 20 16407882 16407882 + Missense_Mutation SNP A C P05-620 Unknown Somatic WGS Illumina GAIIx KIF16B 55614 CPCGene hg19 20 16492093 16492093 + Missense_Mutation SNP C T CPCG0190-F1 Unknown Somatic WXS Illumina HiSeq 2500 BANF2 140836 broad.mit.edu hg19 20 17705710 17705710 + Missense_Mutation SNP G A TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx BANF2 140836 broad.mit.edu hg19 20 17716317 17716317 + Missense_Mutation SNP T A P05-3852 Unknown Somatic WGS Illumina GAIIx SEC23B 10483 CPCGene hg19 20 18506438 18506438 + Missense_Mutation SNP G A CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 C20 0 broad.mit.edu hg19 20 20232356 20232356 + Missense_Mutation SNP C T TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx PAX1 5075 broad.mit.edu hg19 20 21687399 21687399 + Missense_Mutation SNP G A P05-620 Unknown Somatic WGS Illumina GAIIx PAX1 5075 broad.mit.edu hg19 20 21689987 21689987 + Missense_Mutation SNP C T TCGA-QU-A6IO-01 Unknown Somatic WXS Illumina GAIIx SSTR4 6754 broad.mit.edu hg19 20 23016627 23016627 + Missense_Mutation SNP C T TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx CD93 22918 broad.mit.edu hg19 20 23065795 23065795 + Missense_Mutation SNP G A PR-08-4154 Unknown Somatic WGS Illumina GAIIx CD93 22918 broad.mit.edu hg19 20 23066616 23066616 + Missense_Mutation SNP C T P03-1426 Unknown Somatic WGS Illumina GAIIx PYGB 5834 CPCGene hg19 20 25263891 25263891 + Missense_Mutation SNP G A CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 NINL 22981 broad.mit.edu hg19 20 25439071 25439071 + Missense_Mutation SNP C T TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx ZNF337 26152 broad.mit.edu hg19 20 25666234 25666234 + Missense_Mutation SNP T G TCGA-HC-A6AO-01 Unknown Somatic WXS Illumina GAIIx TPX2 22974 broad.mit.edu hg19 20 30363692 30363692 + Missense_Mutation SNP G T TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx TPX2 22974 EMBL hg19 20 30382292 30382292 + Missense_Mutation SNP C T EOPC-08 Unknown Somatic WGS Illumina HiSeq2000 MYLK2 85366 broad.mit.edu hg19 20 30408169 30408169 + Missense_Mutation SNP C T TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx XKR7 343702 broad.mit.edu hg19 20 30584459 30584459 + Missense_Mutation SNP C T TCGA-CH-5740-01 Unknown Somatic WXS Illumina GAIIx HCK 3055 broad.mit.edu hg19 20 30681780 30681780 + Missense_Mutation SNP G A TCGA-J4-A83N-01 Unknown Somatic WXS Illumina GAIIx KIF3B 9371 broad.mit.edu hg19 20 30904102 30904102 + Missense_Mutation SNP C T TCGA-CH-5740-01 Unknown Somatic WXS Illumina GAIIx ASXL1 171023 broad.mit.edu hg19 20 31023728 31023728 + Missense_Mutation SNP G A TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx BPIFB3 359710 broad.mit.edu hg19 20 31643347 31643347 + Missense_Mutation SNP G A TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx CDK5RAP1 51654 broad.mit.edu hg19 20 31961946 31961946 + Missense_Mutation SNP G A TCGA-G9-7522-01 Unknown Somatic WGS Illumina GAIIx CBFA2T2 9139 CPCGene hg19 20 32224487 32224487 + Missense_Mutation SNP G A CPCG0121-F1 Unknown Somatic WXS Illumina HiSeq 2500 RALY 22913 broad.mit.edu hg19 20 32664886 32664886 + Missense_Mutation SNP T C P07-837 Unknown Somatic WGS Illumina GAIIx AHCY 191 broad.mit.edu hg19 20 32878543 32878543 + Missense_Mutation SNP T C TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx ITCH 83737 broad.mit.edu hg19 20 33033194 33033194 + Missense_Mutation SNP T G TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx NCOA6 23054 broad.mit.edu hg19 20 33337257 33337257 + Missense_Mutation SNP G A PR-STID0000002872 Unknown Somatic WGS Illumina GAIIx NCOA6 23054 broad.mit.edu hg19 20 33345222 33345222 + Missense_Mutation SNP G A PR-03-3125 Unknown Somatic WGS Illumina GAIIx ACSS2 55902 broad.mit.edu hg19 20 33514747 33514747 + Missense_Mutation SNP C T TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx CEP250 11190 CPCGene hg19 20 34090919 34090919 + Missense_Mutation SNP A T CPCG0217-F1 Unknown Somatic WXS Illumina HiSeq 2500 ERGIC3 51614 CPCGene hg19 20 34145271 34145271 + Missense_Mutation SNP C T CPCG0374-F1 Unknown Somatic WXS Illumina HiSeq 2500 RBM39 9584 broad.mit.edu hg19 20 34309765 34309765 + Missense_Mutation SNP T C P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx RBM39 9584 broad.mit.edu hg19 20 34312500 34312500 + Missense_Mutation SNP C T TCGA-QU-A6IO-01 Unknown Somatic WXS Illumina GAIIx EPB41L1 2036 broad.mit.edu hg19 20 34782245 34782245 + Missense_Mutation SNP G A TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx DSN1 79980 broad.mit.edu hg19 20 35383221 35383221 + Missense_Mutation SNP C T TCGA-QU-A6IO-01 Unknown Somatic WXS Illumina GAIIx RBL1 5933 EMBL hg19 20 35635932 35635932 + Missense_Mutation SNP C A EOPC-06 Unknown Somatic WGS Illumina HiSeq2000 CTNNBL1 56259 broad.mit.edu hg19 20 36488410 36488410 + Missense_Mutation SNP C T TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx RALGAPB 57148 broad.mit.edu hg19 20 37128156 37128156 + Missense_Mutation SNP G A P03-2345 Unknown Somatic WGS Illumina GAIIx ACTR5 79913 broad.mit.edu hg19 20 37400382 37400382 + Missense_Mutation SNP G A TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx FAM83D 81610 broad.mit.edu hg19 20 37580707 37580707 + Missense_Mutation SNP G A TCGA-EJ-7325-01 Unknown Somatic WXS Illumina GAIIx PLCG1 5335 CPCGene hg19 20 39801164 39801164 + Missense_Mutation SNP C A CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 EMILIN3 90187 broad.mit.edu hg19 20 39990234 39990234 + Missense_Mutation SNP C T P07-684-Tumor Unknown Somatic WXS Illumina GAIIx CHD6 84181 CPCGene hg19 20 40049729 40049729 + Missense_Mutation SNP T C CPCG0342-F1 Unknown Somatic WXS Illumina HiSeq 2500 MYBL2 4605 broad.mit.edu hg19 20 42320830 42320830 + Missense_Mutation SNP T C P03-1426 Unknown Somatic WGS Illumina GAIIx FITM2 128486 broad.mit.edu hg19 20 42935850 42935850 + Missense_Mutation SNP C T PR-03-3125 Unknown Somatic WGS Illumina GAIIx HNF4A 3172 broad.mit.edu hg19 20 43056985 43056985 + Missense_Mutation SNP C T TCGA-QU-A6IO-01 Unknown Somatic WXS Illumina GAIIx WISP2 8839 broad.mit.edu hg19 20 43355879 43355879 + Missense_Mutation SNP G A TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx KCNS1 3787 broad.mit.edu hg19 20 43727084 43727084 + Missense_Mutation SNP A T TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx SEMG1 6406 broad.mit.edu hg19 20 43837303 43837303 + Missense_Mutation SNP C T PR-02-2072-Tumor Unknown Somatic WXS Illumina GAIIx WFDC6 140870 broad.mit.edu hg19 20 44167989 44167989 + Missense_Mutation SNP G C TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx ZSWIM3 140831 EMBL hg19 20 44505802 44505802 + Missense_Mutation SNP G A EOPC-09 Unknown Somatic WGS Illumina HiSeq2000 ZNF335 63925 CPCGene hg19 20 44581241 44581241 + Missense_Mutation SNP A G CPCG0346-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF335 63925 CPCGene hg19 20 44582437 44582437 + Missense_Mutation SNP C T CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC12A5 57468 broad.mit.edu hg19 20 44671824 44671824 + Missense_Mutation SNP G A TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx EYA2 2139 broad.mit.edu hg19 20 45797830 45797830 + Missense_Mutation SNP A C TCGA-EJ-5497-01 Unknown Somatic WXS Illumina GAIIx ZMYND8 23613 broad.mit.edu hg19 20 45905365 45905365 + Missense_Mutation SNP G A P09-1580-Tumor Unknown Somatic WXS Illumina GAIIx NCOA3 8202 broad.mit.edu hg19 20 46266468 46266468 + Missense_Mutation SNP C G P08-1042 Unknown Somatic WGS Illumina GAIIx NCOA3 8202 broad.mit.edu hg19 20 46267838 46267838 + Missense_Mutation SNP A G TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx NCOA3 8202 broad.mit.edu hg19 20 46281766 46281766 + Missense_Mutation SNP A G PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx SULF2 55959 broad.mit.edu hg19 20 46301041 46301041 + Missense_Mutation SNP C T TCGA-EJ-7783-01 Unknown Somatic WXS Illumina GAIIx DDX27 55661 broad.mit.edu hg19 20 47845307 47845307 + Missense_Mutation SNP C T TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx DDX27 55661 CPCGene hg19 20 47858506 47858506 + Missense_Mutation SNP A C CPCG0324-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNFX1 57169 broad.mit.edu hg19 20 47863892 47863892 + Missense_Mutation SNP G C TCGA-EJ-7218-01 Unknown Somatic WXS Illumina GAIIx SPATA2 9825 broad.mit.edu hg19 20 48522673 48522673 + Missense_Mutation SNP C T PR-09-5700-Tumor Unknown Somatic WXS Illumina GAIIx TMEM189-UBE2V1 387522 broad.mit.edu hg19 20 48699408 48699408 + Missense_Mutation SNP G A TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx TMEM189 387521 broad.mit.edu hg19 20 48746131 48746131 + Missense_Mutation SNP G C TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx CEBPB 1051 CPCGene hg19 20 48807896 48807896 + Missense_Mutation SNP C G CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAM65C 140876 CPCGene hg19 20 49219156 49219156 + Missense_Mutation SNP T A CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADNP 23394 broad.mit.edu hg19 20 49510602 49510602 + Missense_Mutation SNP C T PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx ATP9A 10079 broad.mit.edu hg19 20 50235573 50235573 + Missense_Mutation SNP G A PR-2621 Unknown Somatic WGS Illumina GAIIx ATP9A 10079 broad.mit.edu hg19 20 50244193 50244193 + Missense_Mutation SNP C A TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx ZNF217 7764 CPCGene hg19 20 52193536 52193536 + Missense_Mutation SNP G C CPCG0124-F1 Unknown Somatic WXS Illumina HiSeq 2500 BCAS1 8537 broad.mit.edu hg19 20 52601966 52601966 + Missense_Mutation SNP G T TCGA-HC-A6AO-01 Unknown Somatic WXS Illumina GAIIx MC3R 4159 broad.mit.edu hg19 20 54823920 54823920 + Missense_Mutation SNP G T TCGA-J4-A6M7-01 Unknown Somatic WXS Illumina GAIIx FAM210B 116151 CPCGene hg19 20 54941224 54941224 + Missense_Mutation SNP T A CPCG0232-F1 Unknown Somatic WXS Illumina HiSeq 2500 AURKA 6790 broad.mit.edu hg19 20 54948482 54948482 + Missense_Mutation SNP A G PR-02-2072-Tumor Unknown Somatic WXS Illumina GAIIx CTCFL 140690 broad.mit.edu hg19 20 56099193 56099193 + Missense_Mutation SNP C T TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx APCDD1L 164284 CPCGene hg19 20 57036242 57036242 + Missense_Mutation SNP C T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 GNAS 2778 broad.mit.edu hg19 20 57415308 57415308 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx GNAS 2778 broad.mit.edu hg19 20 57415470 57415470 + Missense_Mutation SNP C T TCGA-G9-6365-01 Unknown Somatic WGS Illumina GAIIx GNAS 2778 CPCGene hg19 20 57429108 57429108 + Missense_Mutation SNP C T CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 NELFCD 51497 broad.mit.edu hg19 20 57568707 57568707 + Missense_Mutation SNP G A P04-47-Tumor Unknown Somatic WXS Illumina GAIIx TUBB1 81027 CPCGene hg19 20 57598003 57598003 + Missense_Mutation SNP C T CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 TUBB1 81027 broad.mit.edu hg19 20 57598857 57598857 + Missense_Mutation SNP G C TCGA-G9-6348-01 Unknown Somatic WXS Illumina GAIIx ZNF831 128611 broad.mit.edu hg19 20 57766707 57766707 + Missense_Mutation SNP C T PR-2762-Tumor Unknown Somatic WXS Illumina GAIIx ZNF831 128611 broad.mit.edu hg19 20 57769548 57769548 + Missense_Mutation SNP G A TCGA-EJ-5509-01 Unknown Somatic WXS Illumina GAIIx ZNF831 128611 broad.mit.edu hg19 20 57769568 57769568 + Missense_Mutation SNP G A P04-594-Tumor Unknown Somatic WXS Illumina GAIIx SYCP2 10388 CPCGene hg19 20 58468235 58468235 + Missense_Mutation SNP T C CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 SYCP2 10388 broad.mit.edu hg19 20 58470533 58470533 + Missense_Mutation SNP T C TCGA-HC-7212-01 Unknown Somatic WXS Illumina GAIIx CDH26 60437 broad.mit.edu hg19 20 58560088 58560088 + Missense_Mutation SNP C G P04-1084 Unknown Somatic WGS Illumina GAIIx CDH4 1002 broad.mit.edu hg19 20 60448792 60448792 + Missense_Mutation SNP G A TCGA-G9-6377-01 Unknown Somatic WXS Illumina GAIIx CDH4 1002 broad.mit.edu hg19 20 60448832 60448832 + Missense_Mutation SNP C T TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx TAF4 6874 broad.mit.edu hg19 20 60581570 60581570 + Missense_Mutation SNP G A P07-5037 Unknown Somatic WGS Illumina GAIIx SS18L1 26039 CPCGene hg19 20 60733751 60733751 + Missense_Mutation SNP G A CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 LAMA5 3911 broad.mit.edu hg19 20 60884512 60884512 + Missense_Mutation SNP G C TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx LAMA5 3911 broad.mit.edu hg19 20 60887497 60887497 + Missense_Mutation SNP T G TCGA-VN-A88L-01 Unknown Somatic WXS Illumina GAIIx LAMA5 3911 CPCGene hg19 20 60888043 60888043 + Missense_Mutation SNP C T CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 RPS21 6227 EMBL hg19 20 60962678 60962678 + Missense_Mutation SNP A G EOPC-10 Unknown Somatic WGS Illumina HiSeq2000 CABLES2 81928 CPCGene hg19 20 60982286 60982286 + Missense_Mutation SNP G C CPCG0241-F1 Unknown Somatic WXS Illumina HiSeq 2500 COL9A3 1299 CPCGene hg19 20 61452566 61452566 + Missense_Mutation SNP G A CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 DIDO1 11083 broad.mit.edu hg19 20 61511229 61511229 + Missense_Mutation SNP G A PR-09-5630-Tumor Unknown Somatic WXS Illumina GAIIx DIDO1 11083 CPCGene hg19 20 61538699 61538699 + Missense_Mutation SNP G A CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 COL20A1 57642 broad.mit.edu hg19 20 61929342 61929342 + Missense_Mutation SNP G A TCGA-2A-A8W1-01 Unknown Somatic WXS Illumina GAIIx COL20A1 57642 broad.mit.edu hg19 20 61943890 61943890 + Missense_Mutation SNP G A P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx KCNQ2 3785 broad.mit.edu hg19 20 62038263 62038263 + Missense_Mutation SNP C T TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx KCNQ2 3785 broad.mit.edu hg19 20 62071002 62071002 + Missense_Mutation SNP G C PR-04-1243 Unknown Somatic WGS Illumina GAIIx LIME1 54923 broad.mit.edu hg19 20 62370021 62370021 + Missense_Mutation SNP A G TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx ZNF512B 57473 broad.mit.edu hg19 20 62599237 62599237 + Missense_Mutation SNP C A PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx MYT1 4661 broad.mit.edu hg19 20 62837118 62837118 + Missense_Mutation SNP G A PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx TPTE 7179 broad.mit.edu hg19 21 10906915 10906915 + Missense_Mutation SNP C T TCGA-HC-8261-01 Unknown Somatic WXS Illumina GAIIx TPTE 7179 broad.mit.edu hg19 21 10942923 10942923 + Missense_Mutation SNP G A P09-120-Tumor Unknown Somatic WXS Illumina GAIIx TPTE 7179 broad.mit.edu hg19 21 10942923 10942923 + Missense_Mutation SNP G A TCGA-EJ-5502-01 Unknown Somatic WXS Illumina GAIIx TPTE 7179 broad.mit.edu hg19 21 10943003 10943003 + Missense_Mutation SNP C T TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx TPTE 7179 broad.mit.edu hg19 21 10943003 10943003 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx TPTE 7179 broad.mit.edu hg19 21 10943003 10943003 + Missense_Mutation SNP C T P07-684-Tumor Unknown Somatic WXS Illumina GAIIx TPTE 7179 broad.mit.edu hg19 21 10943003 10943003 + Missense_Mutation SNP C T P09-120-Tumor Unknown Somatic WXS Illumina GAIIx TPTE 7179 broad.mit.edu hg19 21 10943003 10943003 + Missense_Mutation SNP C T TCGA-QU-A6IP-01 Unknown Somatic WXS Illumina GAIIx NCAM2 4685 broad.mit.edu hg19 21 22804447 22804447 + Missense_Mutation SNP T A TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx CYYR1 116159 broad.mit.edu hg19 21 27840931 27840931 + Missense_Mutation SNP G A TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx ADAMTS5 11096 CPCGene hg19 21 28305332 28305332 + Missense_Mutation SNP C A CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAMTS5 11096 broad.mit.edu hg19 21 28306855 28306855 + Missense_Mutation SNP G A TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx ADAMTS5 11096 broad.mit.edu hg19 21 28338099 28338099 + Missense_Mutation SNP C T TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx USP16 10600 CPCGene hg19 21 30409722 30409722 + Missense_Mutation SNP C G CPCG0263-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAP3K7CL 56911 broad.mit.edu hg19 21 30547105 30547105 + Missense_Mutation SNP C T PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx GRIK1 2897 broad.mit.edu hg19 21 30927486 30927486 + Missense_Mutation SNP C G P08-716 Unknown Somatic WGS Illumina GAIIx GRIK1 2897 broad.mit.edu hg19 21 30953841 30953841 + Missense_Mutation SNP T A PR-06-1749 Unknown Somatic WGS Illumina GAIIx KRTAP11-1 337880 broad.mit.edu hg19 21 32253539 32253539 + Missense_Mutation SNP C T TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx TIAM1 7074 broad.mit.edu hg19 21 32639279 32639279 + Missense_Mutation SNP C T TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx HUNK 30811 broad.mit.edu hg19 21 33318388 33318388 + Missense_Mutation SNP G A TCGA-HC-8256-01 Unknown Somatic WXS Illumina GAIIx MRAP 56246 CPCGene hg19 21 33679044 33679044 + Missense_Mutation SNP A C CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 SYNJ1 8867 broad.mit.edu hg19 21 34067407 34067407 + Missense_Mutation SNP T G TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx GART 2618 CPCGene hg19 21 34900627 34900627 + Missense_Mutation SNP A C CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 SON 6651 broad.mit.edu hg19 21 34924043 34924043 + Missense_Mutation SNP T G TCGA-VN-A88N-01 Unknown Somatic WXS Illumina GAIIx SMIM11 0 broad.mit.edu hg19 21 35757886 35757886 + Missense_Mutation SNP A G TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx DOPEY2 9980 broad.mit.edu hg19 21 37620719 37620719 + Missense_Mutation SNP A T PR-08-784 Unknown Somatic WGS Illumina GAIIx SIM2 6493 broad.mit.edu hg19 21 38117286 38117286 + Missense_Mutation SNP G A PR-04-1243 Unknown Somatic WGS Illumina GAIIx HLCS 3141 broad.mit.edu hg19 21 38311178 38311178 + Missense_Mutation SNP T C TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx TTC3 7267 broad.mit.edu hg19 21 38460571 38460571 + Missense_Mutation SNP A G P08-1541 Unknown Somatic WGS Illumina GAIIx TTC3 7267 CPCGene hg19 21 38507738 38507738 + Missense_Mutation SNP T C CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTC3 7267 broad.mit.edu hg19 21 38570211 38570211 + Missense_Mutation SNP A G PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx DYRK1A 1859 CPCGene hg19 21 38884422 38884422 + Missense_Mutation SNP G A CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 DSCR4 10281 broad.mit.edu hg19 21 39426967 39426967 + Missense_Mutation SNP G A P07-684-Tumor Unknown Somatic WXS Illumina GAIIx KCNJ15 3772 broad.mit.edu hg19 21 39672014 39672014 + Missense_Mutation SNP T G PR-01-2492-Tumor Unknown Somatic WXS Illumina GAIIx ERG 2078 CPCGene hg19 21 39739561 39739561 + Missense_Mutation SNP T G CPCG0412-F1 Unknown Somatic WXS Illumina HiSeq 2500 ERG 2078 broad.mit.edu hg19 21 39755703 39755703 + Missense_Mutation SNP C A PR-3035-Tumor Unknown Somatic WXS Illumina GAIIx ETS2 2114 CPCGene hg19 21 40188993 40188993 + Missense_Mutation SNP T A CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 BRWD1 54014 broad.mit.edu hg19 21 40636419 40636419 + Missense_Mutation SNP G A P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx BRWD1 54014 broad.mit.edu hg19 21 40668227 40668227 + Missense_Mutation SNP C T TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx DSCAM 1826 CPCGene hg19 21 41385171 41385171 + Missense_Mutation SNP C T CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 DSCAM 1826 CPCGene hg19 21 41457680 41457680 + Missense_Mutation SNP G T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 DSCAM 1826 broad.mit.edu hg19 21 41465774 41465774 + Missense_Mutation SNP C T TCGA-EJ-5521-01 Unknown Somatic WXS Illumina GAIIx DSCAM 1826 broad.mit.edu hg19 21 41551004 41551004 + Missense_Mutation SNP G A TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx DSCAM 1826 broad.mit.edu hg19 21 41719856 41719856 + Missense_Mutation SNP G T TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx BACE2 25825 broad.mit.edu hg19 21 42615330 42615330 + Missense_Mutation SNP T A TCGA-EJ-7792-01 Unknown Somatic WXS Illumina GAIIx TMPRSS2 7113 broad.mit.edu hg19 21 42852443 42852443 + Missense_Mutation SNP C T TCGA-CH-5740-01 Unknown Somatic WXS Illumina GAIIx RIPK4 54101 CPCGene hg19 21 43164251 43164251 + Missense_Mutation SNP T C CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 TFF2 7032 broad.mit.edu hg19 21 43771052 43771052 + Missense_Mutation SNP G A P07-5037 Unknown Somatic WGS Illumina GAIIx RSPH1 89765 broad.mit.edu hg19 21 43897444 43897444 + Missense_Mutation SNP C T P04-1084 Unknown Somatic WGS Illumina GAIIx RSPH1 89765 CPCGene hg19 21 43912972 43912972 + Missense_Mutation SNP C T CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 WDR4 10785 broad.mit.edu hg19 21 44283564 44283564 + Missense_Mutation SNP T C TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx CRYAA 1409 broad.mit.edu hg19 21 44589279 44589279 + Missense_Mutation SNP G A TCGA-EJ-5509-01 Unknown Somatic WXS Illumina GAIIx CRYAA 1409 CPCGene hg19 21 44589374 44589374 + Missense_Mutation SNP C T CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 RRP1B 23076 CPCGene hg19 21 45089805 45089805 + Missense_Mutation SNP G A CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 DNMT3L 29947 broad.mit.edu hg19 21 45679320 45679320 + Missense_Mutation SNP C T TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx AIRE 326 CPCGene hg19 21 45711077 45711077 + Missense_Mutation SNP C A CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 TSPEAR 54084 broad.mit.edu hg19 21 45953635 45953635 + Missense_Mutation SNP T A TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx TSPEAR 54084 CPCGene hg19 21 45953661 45953661 + Missense_Mutation SNP G T CPCG0123-F1 Unknown Somatic WXS Illumina HiSeq 2500 ITGB2 3689 broad.mit.edu hg19 21 46320321 46320321 + Missense_Mutation SNP C A TCGA-EJ-7786-01 Unknown Somatic WXS Illumina GAIIx COL18A1 80781 broad.mit.edu hg19 21 46900696 46900696 + Missense_Mutation SNP G A TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx COL18A1 80781 broad.mit.edu hg19 21 46927489 46927489 + Missense_Mutation SNP A G TCGA-EJ-7786-01 Unknown Somatic WXS Illumina GAIIx PCNT 5116 broad.mit.edu hg19 21 47836289 47836289 + Missense_Mutation SNP A C TCGA-HC-A6AS-01 Unknown Somatic WXS Illumina GAIIx DIP2A 23181 broad.mit.edu hg19 21 47978270 47978270 + Missense_Mutation SNP G A TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx CCT8L2 150160 broad.mit.edu hg19 22 17071981 17071981 + Missense_Mutation SNP T A TCGA-J4-A6M7-01 Unknown Somatic WXS Illumina GAIIx CCT8L2 150160 broad.mit.edu hg19 22 17072823 17072823 + Missense_Mutation SNP G A PR-04-639-Tumor Unknown Somatic WXS Illumina GAIIx CCT8L2 150160 broad.mit.edu hg19 22 17073401 17073401 + Missense_Mutation SNP G A TCGA-J4-A67N-01 Unknown Somatic WXS Illumina GAIIx XKR3 150165 broad.mit.edu hg19 22 17288741 17288741 + Missense_Mutation SNP T C TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx GAB4 128954 broad.mit.edu hg19 22 17443635 17443635 + Missense_Mutation SNP G A TCGA-J4-A83K-01 Unknown Somatic WXS Illumina GAIIx CECR6 27439 CPCGene hg19 22 17601199 17601199 + Missense_Mutation SNP G T CPCG0262-F1 Unknown Somatic WXS Illumina HiSeq 2500 CECR2 27443 broad.mit.edu hg19 22 18022395 18022395 + Missense_Mutation SNP C T P03-1906-Tumor Unknown Somatic WXS Illumina GAIIx PRODH 5625 broad.mit.edu hg19 22 18909892 18909892 + Missense_Mutation SNP G T P07-5021 Unknown Somatic WGS Illumina GAIIx TSSK2 23617 broad.mit.edu hg19 22 19119476 19119476 + Missense_Mutation SNP G C TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx TSSK2 23617 broad.mit.edu hg19 22 19119550 19119550 + Missense_Mutation SNP C A TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx DGCR14 8220 broad.mit.edu hg19 22 19121828 19121828 + Missense_Mutation SNP G A TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx CLTCL1 8218 broad.mit.edu hg19 22 19209025 19209025 + Missense_Mutation SNP C T TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx CDC45 8318 broad.mit.edu hg19 22 19471509 19471509 + Missense_Mutation SNP A T P07-144 Unknown Somatic WGS Illumina GAIIx CLDN5 7122 broad.mit.edu hg19 22 19511350 19511350 + Missense_Mutation SNP G A PR-09-5446-Tumor Unknown Somatic WXS Illumina GAIIx TXNRD2 10587 CPCGene hg19 22 19864723 19864723 + Missense_Mutation SNP C T CPCG0256-F1 Unknown Somatic WXS Illumina HiSeq 2500 RTN4R 65078 broad.mit.edu hg19 22 20230164 20230164 + Missense_Mutation SNP G T TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx SCARF2 91179 broad.mit.edu hg19 22 20785739 20785739 + Missense_Mutation SNP C A P05-620 Unknown Somatic WGS Illumina GAIIx MED15 51586 broad.mit.edu hg19 22 20909385 20909385 + Missense_Mutation SNP C T TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx SERPIND1 3053 broad.mit.edu hg19 22 21133990 21133990 + Missense_Mutation SNP C A TCGA-EJ-7314-01 Unknown Somatic WXS Illumina GAIIx PI4KA 5297 broad.mit.edu hg19 22 21161744 21161744 + Missense_Mutation SNP G A PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx PI4KA 5297 broad.mit.edu hg19 22 21172825 21172825 + Missense_Mutation SNP G A TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx SNAP29 9342 broad.mit.edu hg19 22 21213458 21213458 + Missense_Mutation SNP C T TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx LZTR1 8216 broad.mit.edu hg19 22 21346523 21346523 + Missense_Mutation SNP C T PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx P2RX6 9127 CPCGene hg19 22 21369544 21369544 + Missense_Mutation SNP G A CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 P2RX6 9127 CPCGene hg19 22 21377658 21377658 + Missense_Mutation SNP G A CPCG0048-F1 Unknown Somatic WXS Illumina HiSeq 2500 LOC400891 0 CPCGene hg19 22 21407727 21407727 + Missense_Mutation SNP C T CPCG0262-F1 Unknown Somatic WXS Illumina HiSeq 2500 SDF2L1 23753 broad.mit.edu hg19 22 21996651 21996651 + Missense_Mutation SNP C T PR-2621 Unknown Somatic WGS Illumina GAIIx GSTT1 2952 broad.mit.edu hg19 22 24384213 24384213 + Missense_Mutation SNP G A TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx CABIN1 23523 broad.mit.edu hg19 22 24462966 24462966 + Missense_Mutation SNP G A PR-3042 Unknown Somatic WGS Illumina GAIIx CABIN1 23523 broad.mit.edu hg19 22 24466971 24466971 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx SUSD2 56241 CPCGene hg19 22 24579157 24579157 + Missense_Mutation SNP G T CPCG0003-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADORA2A 135 broad.mit.edu hg19 22 24837228 24837228 + Missense_Mutation SNP G A TCGA-J4-8200-01 Unknown Somatic WXS Illumina GAIIx LRRC75B 388886 broad.mit.edu hg19 22 24982284 24982284 + Missense_Mutation SNP C T TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx PIWIL3 440822 broad.mit.edu hg19 22 25144942 25144942 + Missense_Mutation SNP C A TCGA-EJ-5522-01 Unknown Somatic WXS Illumina GAIIx PIWIL3 440822 broad.mit.edu hg19 22 25155922 25155922 + Missense_Mutation SNP C T TCGA-HC-7736-01 Unknown Somatic WXS Illumina GAIIx SGSM1 129049 broad.mit.edu hg19 22 25301132 25301132 + Missense_Mutation SNP A T PR-3042 Unknown Somatic WGS Illumina GAIIx TMEM211 255349 broad.mit.edu hg19 22 25331314 25331314 + Missense_Mutation SNP C A TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx MYO18B 84700 broad.mit.edu hg19 22 26219559 26219559 + Missense_Mutation SNP C T P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx MYO18B 84700 CPCGene hg19 22 26304316 26304316 + Missense_Mutation SNP G A CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 SRRD 402055 broad.mit.edu hg19 22 26884138 26884138 + Missense_Mutation SNP T C TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx TFIP11 24144 broad.mit.edu hg19 22 26895381 26895381 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx TFIP11 24144 broad.mit.edu hg19 22 26899663 26899663 + Missense_Mutation SNP G A TCGA-G9-7519-01 Unknown Somatic WXS Illumina GAIIx CRYBB1 1414 broad.mit.edu hg19 22 27008042 27008042 + Missense_Mutation SNP G A PR-04-3347-Tumor Unknown Somatic WXS Illumina GAIIx MN1 4330 CPCGene hg19 22 28146920 28146920 + Missense_Mutation SNP C T CPCG0357-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTC28 23331 CPCGene hg19 22 28392121 28392121 + Splice_Site SNP A G CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTC28 23331 broad.mit.edu hg19 22 28410349 28410349 + Missense_Mutation SNP T A P07-5318 Unknown Somatic WGS Illumina GAIIx CCDC117 150275 CPCGene hg19 22 29182197 29182197 + Missense_Mutation SNP T A CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNRF3 84133 broad.mit.edu hg19 22 29446065 29446065 + Missense_Mutation SNP G T P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx EMID1 129080 broad.mit.edu hg19 22 29627076 29627076 + Missense_Mutation SNP C T PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx EMID1 129080 broad.mit.edu hg19 22 29628247 29628247 + Missense_Mutation SNP C A TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx NEFH 4744 CPCGene hg19 22 29876534 29876534 + Missense_Mutation SNP C A CPCG0372-F1 Unknown Somatic WXS Illumina HiSeq 2500 NEFH 4744 broad.mit.edu hg19 22 29885594 29885594 + Missense_Mutation SNP A T TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx THOC5 8563 CPCGene hg19 22 29924124 29924124 + Missense_Mutation SNP G A CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 NF2 4771 broad.mit.edu hg19 22 30035110 30035110 + Missense_Mutation SNP C T TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx UQCR10 29796 CPCGene hg19 22 30163396 30163396 + Missense_Mutation SNP C A CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 PES1 23481 broad.mit.edu hg19 22 30976074 30976074 + Missense_Mutation SNP C T TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx TCN2 6948 broad.mit.edu hg19 22 31022486 31022486 + Missense_Mutation SNP A T TCGA-G9-6371-01 Unknown Somatic WXS Illumina GAIIx PATZ1 23598 broad.mit.edu hg19 22 31740950 31740950 + Missense_Mutation SNP A C PR-06-3199 Unknown Somatic WGS Illumina GAIIx SFI1 9814 CPCGene hg19 22 31924704 31924704 + Missense_Mutation SNP C G CPCG0357-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRR14L 253143 broad.mit.edu hg19 22 32112093 32112093 + Missense_Mutation SNP C T P09-37 Unknown Somatic WGS Illumina GAIIx RTCB 51493 broad.mit.edu hg19 22 32794016 32794016 + Missense_Mutation SNP A G TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx RTCB 51493 CPCGene hg19 22 32797860 32797860 + Missense_Mutation SNP A C CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 RTCB 51493 CPCGene hg19 22 32802661 32802661 + Missense_Mutation SNP C A CPCG0413-F1 Unknown Somatic WXS Illumina HiSeq 2500 RASD2 23551 broad.mit.edu hg19 22 35947956 35947956 + Missense_Mutation SNP C T PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx APOL5 80831 CPCGene hg19 22 36123127 36123127 + Missense_Mutation SNP C G CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 FOXRED2 80020 broad.mit.edu hg19 22 36897391 36897391 + Missense_Mutation SNP G A TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx FOXRED2 80020 CPCGene hg19 22 36900193 36900193 + Missense_Mutation SNP C A CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 FOXRED2 80020 broad.mit.edu hg19 22 36902358 36902358 + Missense_Mutation SNP C T P09-628 Unknown Somatic WGS Illumina GAIIx CACNG2 10369 broad.mit.edu hg19 22 36960764 36960764 + Missense_Mutation SNP G A TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx NCF4 4689 broad.mit.edu hg19 22 37263465 37263465 + Missense_Mutation SNP C T TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx CSF2RB 1439 CPCGene hg19 22 37334384 37334384 + Missense_Mutation SNP G T CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMPRSS6 164656 broad.mit.edu hg19 22 37480797 37480797 + Missense_Mutation SNP C T TCGA-G9-6384-01 Unknown Somatic WXS Illumina GAIIx NOL12 79159 CPCGene hg19 22 38087334 38087334 + Missense_Mutation SNP C T CPCG0354-F1 Unknown Somatic WXS Illumina HiSeq 2500 TRIOBP 11078 broad.mit.edu hg19 22 38119196 38119196 + Missense_Mutation SNP C T PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx TRIOBP 11078 CPCGene hg19 22 38131370 38131370 + Missense_Mutation SNP C T CPCG0357-F1 Unknown Somatic WXS Illumina HiSeq 2500 TRIOBP 11078 broad.mit.edu hg19 22 38165192 38165192 + Missense_Mutation SNP C T TCGA-J4-A67S-01 Unknown Somatic WXS Illumina GAIIx PICK1 9463 broad.mit.edu hg19 22 38455291 38455291 + Missense_Mutation SNP A G TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx SLC16A8 23539 CPCGene hg19 22 38477012 38477012 + Missense_Mutation SNP C G CPCG0124-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMEM184B 25829 broad.mit.edu hg19 22 38641959 38641959 + Missense_Mutation SNP C T TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx KCNJ4 3761 broad.mit.edu hg19 22 38822859 38822859 + Missense_Mutation SNP G A TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx SUN2 25777 broad.mit.edu hg19 22 39141779 39141779 + Missense_Mutation SNP G A TCGA-XJ-A83G-01 Unknown Somatic WXS Illumina GAIIx APOBEC3B 9582 broad.mit.edu hg19 22 39385568 39385568 + Missense_Mutation SNP G A TCGA-EJ-7786-01 Unknown Somatic WXS Illumina GAIIx SYNGR1 9145 broad.mit.edu hg19 22 39770548 39770548 + Missense_Mutation SNP C T TCGA-HC-7075-01 Unknown Somatic WGS Illumina GAIIx MGAT3 4248 CPCGene hg19 22 39884917 39884917 + Missense_Mutation SNP C T CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 TNRC6B 23112 CPCGene hg19 22 40657911 40657911 + Missense_Mutation SNP T G CPCG0001-F1 Unknown Somatic WXS Illumina HiSeq 2500 SGSM3 27352 broad.mit.edu hg19 22 40805725 40805725 + Missense_Mutation SNP G C TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx SLC25A17 10478 broad.mit.edu hg19 22 41169988 41169988 + Missense_Mutation SNP T C TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx EP300 2033 broad.mit.edu hg19 22 41573977 41573977 + Missense_Mutation SNP C T TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx ZC3H7B 23264 broad.mit.edu hg19 22 41735080 41735080 + Missense_Mutation SNP T G TCGA-EJ-7781-01 Unknown Somatic WXS Illumina GAIIx XRCC6 2547 broad.mit.edu hg19 22 42059704 42059704 + Missense_Mutation SNP C T TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx MEI1 150365 CPCGene hg19 22 42119957 42119957 + Missense_Mutation SNP G T CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 SREBF2 6721 broad.mit.edu hg19 22 42264696 42264696 + Missense_Mutation SNP A T TCGA-G9-6371-01 Unknown Somatic WXS Illumina GAIIx SEPT3 55964 broad.mit.edu hg19 22 42387580 42387580 + Missense_Mutation SNP C T P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx TCF20 6942 broad.mit.edu hg19 22 42610895 42610895 + Missense_Mutation SNP A G TCGA-EJ-5527-01 Unknown Somatic WXS Illumina GAIIx A4GALT 53947 broad.mit.edu hg19 22 43088924 43088924 + Missense_Mutation SNP G A TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx A4GALT 53947 CPCGene hg19 22 43089373 43089373 + Missense_Mutation SNP G C CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 PACSIN2 11252 broad.mit.edu hg19 22 43267420 43267420 + Missense_Mutation SNP G A TCGA-G9-6348-01 Unknown Somatic WXS Illumina GAIIx BIK 638 CPCGene hg19 22 43524560 43524560 + Missense_Mutation SNP T G CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 LDOC1L 84247 CPCGene hg19 22 44892898 44892898 + Missense_Mutation SNP G A CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 LDOC1L 84247 CPCGene hg19 22 44893324 44893324 + Missense_Mutation SNP G A CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 PKDREJ 10343 broad.mit.edu hg19 22 46653656 46653656 + Missense_Mutation SNP C G TCGA-J4-A67K-01 Unknown Somatic WXS Illumina GAIIx CERK 64781 broad.mit.edu hg19 22 47095356 47095356 + Missense_Mutation SNP G A TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx CERK 64781 broad.mit.edu hg19 22 47116019 47116019 + Missense_Mutation SNP A G P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx BRD1 23774 broad.mit.edu hg19 22 50217248 50217248 + Missense_Mutation SNP C T TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx MLC1 23209 broad.mit.edu hg19 22 50512646 50512646 + Missense_Mutation SNP G A TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx MLC1 23209 broad.mit.edu hg19 22 50518782 50518782 + Missense_Mutation SNP G A P08-501 Unknown Somatic WGS Illumina GAIIx MOV10L1 54456 broad.mit.edu hg19 22 50564694 50564694 + Missense_Mutation SNP T G PR-0099-Tumor Unknown Somatic WXS Illumina GAIIx MOV10L1 54456 broad.mit.edu hg19 22 50582666 50582666 + Missense_Mutation SNP C T TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx TUBGCP6 85378 broad.mit.edu hg19 22 50671786 50671786 + Missense_Mutation SNP C T PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx SBF1 6305 CPCGene hg19 22 50893535 50893535 + Missense_Mutation SNP G A CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 SBF1 6305 CPCGene hg19 22 50898529 50898529 + Missense_Mutation SNP G A CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 SBF1 6305 broad.mit.edu hg19 22 50900484 50900484 + Missense_Mutation SNP C T TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx TYMP 1890 broad.mit.edu hg19 22 50967011 50967011 + Missense_Mutation SNP C T P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx KLHDC7B 113730 broad.mit.edu hg19 22 50987891 50987891 + Missense_Mutation SNP G A TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx KLHDC7B 113730 CPCGene hg19 22 50988243 50988243 + Missense_Mutation SNP G C CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 CPT1B 1375 broad.mit.edu hg19 22 51016315 51016315 + Missense_Mutation SNP G T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx CHL1 10752 broad.mit.edu hg19 3 447270 447270 + Missense_Mutation SNP G A P09-1580-Tumor Unknown Somatic WXS Illumina GAIIx CNTN6 27255 CPCGene hg19 3 1269674 1269674 + Missense_Mutation SNP G C CPCG0372-F1 Unknown Somatic WXS Illumina HiSeq 2500 CNTN6 27255 CPCGene hg19 3 1394103 1394103 + Missense_Mutation SNP C T CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 CNTN6 27255 CPCGene hg19 3 1414032 1414032 + Missense_Mutation SNP C T CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 CNTN4 152330 broad.mit.edu hg19 3 2613205 2613205 + Missense_Mutation SNP A G PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx CNTN4 152330 CPCGene hg19 3 2777986 2777986 + Missense_Mutation SNP T A CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 LRRN1 57633 broad.mit.edu hg19 3 3888289 3888289 + Missense_Mutation SNP G T PR-08-2153 Unknown Somatic WGS Illumina GAIIx SUMF1 285362 CPCGene hg19 3 4459797 4459797 + Missense_Mutation SNP G A CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 ITPR1 3708 broad.mit.edu hg19 3 4878615 4878615 + Missense_Mutation SNP A G PR-0099-Tumor Unknown Somatic WXS Illumina GAIIx EDEM1 9695 broad.mit.edu hg19 3 5248922 5248922 + Missense_Mutation SNP G C PR-06-1749 Unknown Somatic WGS Illumina GAIIx EDEM1 9695 broad.mit.edu hg19 3 5249795 5249795 + Missense_Mutation SNP G A PR-06-1749 Unknown Somatic WGS Illumina GAIIx GRM7 2917 broad.mit.edu hg19 3 7494322 7494322 + Missense_Mutation SNP C A P05-3852 Unknown Somatic WGS Illumina GAIIx CPNE9 151835 broad.mit.edu hg19 3 9754692 9754692 + Missense_Mutation SNP A C TCGA-J4-A83K-01 Unknown Somatic WXS Illumina GAIIx BRPF1 7862 broad.mit.edu hg19 3 9788936 9788936 + Missense_Mutation SNP A G TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx CAMK1 8536 broad.mit.edu hg19 3 9804662 9804662 + Missense_Mutation SNP A T TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx IL17RE 132014 CPCGene hg19 3 9944690 9944690 + Missense_Mutation SNP G A CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 IL17RC 84818 CPCGene hg19 3 9972617 9972617 + Missense_Mutation SNP C T CPCG0123-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRRT3 285368 CPCGene hg19 3 9988223 9988223 + Missense_Mutation SNP C T CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 FANCD2 2177 broad.mit.edu hg19 3 10107082 10107082 + Missense_Mutation SNP G A TCGA-EJ-7325-01 Unknown Somatic WXS Illumina GAIIx ATP2B2 491 broad.mit.edu hg19 3 10413604 10413604 + Missense_Mutation SNP G T P08-5852 Unknown Somatic WGS Illumina GAIIx ATP2B2 491 broad.mit.edu hg19 3 10452321 10452321 + Missense_Mutation SNP C T PR-01-2492-Tumor Unknown Somatic WXS Illumina GAIIx SLC6A1 6529 CPCGene hg19 3 11070452 11070452 + Missense_Mutation SNP G A CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATG7 10533 broad.mit.edu hg19 3 11402103 11402103 + Missense_Mutation SNP C G TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx VGLL4 9686 broad.mit.edu hg19 3 11744501 11744501 + Missense_Mutation SNP G A TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx TMEM40 55287 broad.mit.edu hg19 3 12783981 12783981 + Missense_Mutation SNP A G TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx NUP210 23225 broad.mit.edu hg19 3 13381788 13381788 + Missense_Mutation SNP G A TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx NUP210 23225 broad.mit.edu hg19 3 13438886 13438886 + Missense_Mutation SNP T C TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx FBLN2 2199 broad.mit.edu hg19 3 13663379 13663379 + Missense_Mutation SNP G T TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx FBLN2 2199 broad.mit.edu hg19 3 13679189 13679189 + Missense_Mutation SNP G A P06-1125-Tumor Unknown Somatic WXS Illumina GAIIx WNT7A 7476 broad.mit.edu hg19 3 13896275 13896275 + Missense_Mutation SNP G A TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx CHCHD4 131474 broad.mit.edu hg19 3 14154542 14154542 + Missense_Mutation SNP G A PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx TMEM43 79188 broad.mit.edu hg19 3 14171028 14171028 + Missense_Mutation SNP C T P07-5036-Tumor Unknown Somatic WXS Illumina GAIIx XPC 7508 broad.mit.edu hg19 3 14197946 14197946 + Missense_Mutation SNP T C PR-3035-Tumor Unknown Somatic WXS Illumina GAIIx GRIP2 80852 CPCGene hg19 3 14561641 14561641 + Missense_Mutation SNP G A CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCDC174 51244 broad.mit.edu hg19 3 14712672 14712672 + Missense_Mutation SNP A G TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx FGD5 152273 broad.mit.edu hg19 3 14861754 14861754 + Missense_Mutation SNP T C P08-1541 Unknown Somatic WGS Illumina GAIIx METTL6 131965 broad.mit.edu hg19 3 15467952 15467952 + Missense_Mutation SNP T G P05-620 Unknown Somatic WGS Illumina GAIIx EAF1 85403 CPCGene hg19 3 15477945 15477945 + Missense_Mutation SNP G A CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 RFTN1 23180 CPCGene hg19 3 16475363 16475363 + Missense_Mutation SNP G A CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 TBC1D5 9779 broad.mit.edu hg19 3 17279892 17279892 + Missense_Mutation SNP G A TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx KAT2B 8850 CPCGene hg19 3 20142914 20142914 + Missense_Mutation SNP C T CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 SGOL1 0 broad.mit.edu hg19 3 20212592 20212592 + Missense_Mutation SNP G A P08-492 Unknown Somatic WGS Illumina GAIIx NKIRAS1 28512 broad.mit.edu hg19 3 23934708 23934708 + Missense_Mutation SNP C T TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx NR1D2 9975 CPCGene hg19 3 24001249 24001249 + Missense_Mutation SNP A G CPCG0087-F1 Unknown Somatic WXS Illumina HiSeq 2500 TOP2B 7155 CPCGene hg19 3 25660338 25660338 + Missense_Mutation SNP T C CPCG0342-F1 Unknown Somatic WXS Illumina HiSeq 2500 NGLY1 55768 broad.mit.edu hg19 3 25820147 25820147 + Missense_Mutation SNP C T TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx SLC4A7 9497 broad.mit.edu hg19 3 27453179 27453179 + Missense_Mutation SNP T C PR-08-4154 Unknown Somatic WGS Illumina GAIIx SLC4A7 9497 broad.mit.edu hg19 3 27459989 27459989 + Missense_Mutation SNP A C TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx GADL1 339896 broad.mit.edu hg19 3 30903212 30903212 + Missense_Mutation SNP A G PR-04-1243 Unknown Somatic WGS Illumina GAIIx STT3B 201595 CPCGene hg19 3 31638303 31638303 + Missense_Mutation SNP A C CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 STT3B 201595 broad.mit.edu hg19 3 31666516 31666516 + Missense_Mutation SNP G C PR-06-1749 Unknown Somatic WGS Illumina GAIIx OSBPL10 114884 broad.mit.edu hg19 3 31710253 31710253 + Missense_Mutation SNP C T TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx DYNC1LI1 51143 broad.mit.edu hg19 3 32571120 32571120 + Missense_Mutation SNP T G TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx GLB1 2720 CPCGene hg19 3 33099644 33099644 + Missense_Mutation SNP G A CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMPPE 643853 broad.mit.edu hg19 3 33134677 33134677 + Missense_Mutation SNP A C PR-06-1749 Unknown Somatic WGS Illumina GAIIx TMPPE 643853 CPCGene hg19 3 33135555 33135555 + Missense_Mutation SNP G A CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 CRTAP 10491 broad.mit.edu hg19 3 33161858 33161858 + Missense_Mutation SNP T G P05-3436-Tumor Unknown Somatic WXS Illumina GAIIx CLASP2 23122 broad.mit.edu hg19 3 33614724 33614724 + Missense_Mutation SNP T C P08-1042 Unknown Somatic WGS Illumina GAIIx STAC 6769 broad.mit.edu hg19 3 36484942 36484942 + Missense_Mutation SNP C T TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx DCLK3 85443 EMBL hg19 3 36779994 36779994 + Missense_Mutation SNP G A EOPC-10 Unknown Somatic WGS Illumina HiSeq2000 TRANK1 9881 broad.mit.edu hg19 3 36874403 36874403 + Missense_Mutation SNP G A TCGA-HC-A6AQ-01 Unknown Somatic WXS Illumina GAIIx LRRFIP2 9209 broad.mit.edu hg19 3 37125219 37125219 + Missense_Mutation SNP A G TCGA-EJ-5527-01 Unknown Somatic WXS Illumina GAIIx GOLGA4 2803 broad.mit.edu hg19 3 37343758 37343758 + Missense_Mutation SNP G A P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx GOLGA4 2803 CPCGene hg19 3 37370526 37370526 + Missense_Mutation SNP T C CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 ITGA9 3680 CPCGene hg19 3 37560763 37560763 + Missense_Mutation SNP G A CPCG0355-F1 Unknown Somatic WXS Illumina HiSeq 2500 ACAA1 30 broad.mit.edu hg19 3 38167080 38167080 + Missense_Mutation SNP T A PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx XYLB 9942 CPCGene hg19 3 38404439 38404439 + Missense_Mutation SNP C T CPCG0183-F1 Unknown Somatic WXS Illumina HiSeq 2500 XYLB 9942 CPCGene hg19 3 38409704 38409704 + Missense_Mutation SNP C A CPCG0078-F1 Unknown Somatic WXS Illumina HiSeq 2500 SCN5A 6331 CPCGene hg19 3 38591858 38591858 + Missense_Mutation SNP G A CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 SCN5A 6331 broad.mit.edu hg19 3 38601865 38601865 + Missense_Mutation SNP C T TCGA-2A-A8W1-01 Unknown Somatic WXS Illumina GAIIx SCN5A 6331 broad.mit.edu hg19 3 38622674 38622674 + Missense_Mutation SNP G A TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx SCN5A 6331 broad.mit.edu hg19 3 38651315 38651315 + Missense_Mutation SNP G A TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx SCN5A 6331 broad.mit.edu hg19 3 38662446 38662446 + Missense_Mutation SNP T C PR-2761-Tumor Unknown Somatic WXS Illumina GAIIx SCN5A 6331 CPCGene hg19 3 38671884 38671884 + Missense_Mutation SNP G A CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 SCN10A 6336 broad.mit.edu hg19 3 38766807 38766807 + Splice_Site SNP T C TCGA-FC-7708-01 Unknown Somatic WXS Illumina GAIIx SCN11A 11280 CPCGene hg19 3 38913713 38913713 + Missense_Mutation SNP G A CPCG0262-F1 Unknown Somatic WXS Illumina HiSeq 2500 SCN11A 11280 broad.mit.edu hg19 3 38936068 38936068 + Missense_Mutation SNP C A PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx SCN11A 11280 broad.mit.edu hg19 3 38938500 38938500 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx WDR48 57599 broad.mit.edu hg19 3 39093536 39093536 + Missense_Mutation SNP A G TCGA-J4-A83L-01 Unknown Somatic WXS Illumina GAIIx XIRP1 165904 CPCGene hg19 3 39225761 39225761 + Missense_Mutation SNP G A CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 RPSA 3921 broad.mit.edu hg19 3 39449165 39449165 + Missense_Mutation SNP C T PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx RPSA 3921 broad.mit.edu hg19 3 39450137 39450137 + Missense_Mutation SNP T G TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx ZNF619 285267 CPCGene hg19 3 40529477 40529477 + Missense_Mutation SNP T G CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 CTNNB1 1499 CPCGene hg19 3 41266124 41266124 + Missense_Mutation SNP A G CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 ULK4 54986 broad.mit.edu hg19 3 41723142 41723142 + Missense_Mutation SNP C T P05-3436-Tumor Unknown Somatic WXS Illumina GAIIx CYP8B1 1582 broad.mit.edu hg19 3 42916000 42916000 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx CYP8B1 1582 EMBL hg19 3 42916106 42916106 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 SNRK 54861 broad.mit.edu hg19 3 43389316 43389316 + Missense_Mutation SNP T C P03-3391-Tumor Unknown Somatic WXS Illumina GAIIx SNRK 54861 CPCGene hg19 3 43389325 43389325 + Missense_Mutation SNP G A CPCG0341-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANO10 55129 broad.mit.edu hg19 3 43602729 43602729 + Missense_Mutation SNP C A PR-03-3125 Unknown Somatic WGS Illumina GAIIx ANO10 55129 broad.mit.edu hg19 3 43618225 43618225 + Missense_Mutation SNP T C TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx ANO10 55129 broad.mit.edu hg19 3 43618486 43618486 + Missense_Mutation SNP C T PR-3036-Tumor Unknown Somatic WXS Illumina GAIIx KIF15 56992 broad.mit.edu hg19 3 44868980 44868980 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx KIF15 56992 broad.mit.edu hg19 3 44893359 44893359 + Missense_Mutation SNP C T PR-2761-Tumor Unknown Somatic WXS Illumina GAIIx TMEM42 131616 CPCGene hg19 3 44906541 44906541 + Missense_Mutation SNP G C CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 TGM4 7047 broad.mit.edu hg19 3 44943340 44943340 + Missense_Mutation SNP C T TCGA-EJ-7321-01 Unknown Somatic WXS Illumina GAIIx EXOSC7 23016 CPCGene hg19 3 45052818 45052818 + Missense_Mutation SNP G A CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 CLEC3B 7123 broad.mit.edu hg19 3 45077092 45077092 + Missense_Mutation SNP C T PR-08-556 Unknown Somatic WGS Illumina GAIIx LARS2 23395 CPCGene hg19 3 45435983 45435983 + Missense_Mutation SNP C G CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 LARS2 23395 CPCGene hg19 3 45517997 45517997 + Missense_Mutation SNP A G CPCG0374-F1 Unknown Somatic WXS Illumina HiSeq 2500 SACM1L 22908 broad.mit.edu hg19 3 45745007 45745007 + Missense_Mutation SNP C A TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx LZTFL1 54585 CPCGene hg19 3 45869976 45869976 + Missense_Mutation SNP C A CPCG0205-F1 Unknown Somatic WXS Illumina HiSeq 2500 FYCO1 79443 broad.mit.edu hg19 3 45972578 45972578 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx FYCO1 79443 broad.mit.edu hg19 3 46021201 46021201 + Missense_Mutation SNP G A TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx LTF 4057 broad.mit.edu hg19 3 46479456 46479456 + Missense_Mutation SNP A T PR-3035-Tumor Unknown Somatic WXS Illumina GAIIx LTF 4057 broad.mit.edu hg19 3 46490370 46490370 + Missense_Mutation SNP C T TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx LTF 4057 broad.mit.edu hg19 3 46491405 46491405 + Missense_Mutation SNP C A TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx ALS2CL 259173 broad.mit.edu hg19 3 46723007 46723007 + Missense_Mutation SNP A C TCGA-J4-A83L-01 Unknown Somatic WXS Illumina GAIIx SETD2 29072 broad.mit.edu hg19 3 47164980 47164980 + Missense_Mutation SNP T G P09-628 Unknown Somatic WGS Illumina GAIIx SETD2 29072 CPCGene hg19 3 47165534 47165534 + Missense_Mutation SNP G A CPCG0191-F1 Unknown Somatic WXS Illumina HiSeq 2500 KLHL18 23276 CPCGene hg19 3 47385153 47385153 + Missense_Mutation SNP G A CPCG0413-F1 Unknown Somatic WXS Illumina HiSeq 2500 DHX30 22907 broad.mit.edu hg19 3 47884611 47884611 + Missense_Mutation SNP C G TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx CDC25A 993 broad.mit.edu hg19 3 48215872 48215872 + Missense_Mutation SNP G A PR-02-2072-Tumor Unknown Somatic WXS Illumina GAIIx COL7A1 1294 EMBL hg19 3 48619778 48619778 + Missense_Mutation SNP C T EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 COL7A1 1294 broad.mit.edu hg19 3 48623134 48623134 + Missense_Mutation SNP G T TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx COL7A1 1294 broad.mit.edu hg19 3 48626312 48626312 + Missense_Mutation SNP G A PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx TMEM89 440955 broad.mit.edu hg19 3 48658896 48658896 + Missense_Mutation SNP C G P08-1541 Unknown Somatic WGS Illumina GAIIx CELSR3 1951 CPCGene hg19 3 48698354 48698354 + Missense_Mutation SNP G A CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC25A20 788 broad.mit.edu hg19 3 48896044 48896044 + Missense_Mutation SNP T G TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx ARIH2OS 646450 CPCGene hg19 3 48956521 48956521 + Missense_Mutation SNP C T CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 QARS 5859 broad.mit.edu hg19 3 49140801 49140801 + Missense_Mutation SNP T C TCGA-EJ-7792-01 Unknown Somatic WXS Illumina GAIIx QARS 5859 broad.mit.edu hg19 3 49141335 49141335 + Missense_Mutation SNP G A PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx C3 718 broad.mit.edu hg19 3 49314198 49314198 + Missense_Mutation SNP A C PR-08-556 Unknown Somatic WGS Illumina GAIIx AMT 275 broad.mit.edu hg19 3 49455030 49455030 + Missense_Mutation SNP C G TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx BSN 8927 broad.mit.edu hg19 3 49697918 49697918 + Splice_Site SNP G T P07-5318 Unknown Somatic WGS Illumina GAIIx RNF123 63891 EMBL hg19 3 49751230 49751230 + Missense_Mutation SNP C T EOPC-04 Unknown Somatic WGS Illumina HiSeq2000 AMIGO3 386724 broad.mit.edu hg19 3 49755885 49755885 + Missense_Mutation SNP G A TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx GNAI2 2771 CPCGene hg19 3 50294963 50294963 + Missense_Mutation SNP C A CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 LSMEM2 132228 broad.mit.edu hg19 3 50324172 50324172 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx HYAL3 8372 broad.mit.edu hg19 3 50332378 50332378 + Missense_Mutation SNP C T TCGA-HC-7212-01 Unknown Somatic WXS Illumina GAIIx HYAL1 3373 broad.mit.edu hg19 3 50339882 50339882 + Missense_Mutation SNP G T PR-05-3595 Unknown Somatic WGS Illumina GAIIx HYAL1 3373 broad.mit.edu hg19 3 50339883 50339883 + Missense_Mutation SNP C T PR-05-3595 Unknown Somatic WGS Illumina GAIIx HYAL2 8692 broad.mit.edu hg19 3 50357480 50357480 + Missense_Mutation SNP G A PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx CACNA2D2 9254 broad.mit.edu hg19 3 50405278 50405278 + Missense_Mutation SNP C G P03-2345 Unknown Somatic WGS Illumina GAIIx RAD54L2 23132 broad.mit.edu hg19 3 51673507 51673507 + Missense_Mutation SNP G A TCGA-VP-A87C-01 Unknown Somatic WXS Illumina GAIIx GRM2 2912 broad.mit.edu hg19 3 51747262 51747262 + Missense_Mutation SNP C T P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx IQCF3 401067 broad.mit.edu hg19 3 51864455 51864455 + Missense_Mutation SNP A T TCGA-EJ-7330-01 Unknown Somatic WXS Illumina GAIIx IQCF3 401067 broad.mit.edu hg19 3 51864486 51864486 + Missense_Mutation SNP G A PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx DUSP7 1849 broad.mit.edu hg19 3 52088081 52088081 + Missense_Mutation SNP T C TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx DNAH1 25981 broad.mit.edu hg19 3 52386634 52386634 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx DNAH1 25981 broad.mit.edu hg19 3 52430809 52430809 + Missense_Mutation SNP A T TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx BAP1 8314 CPCGene hg19 3 52437542 52437542 + Missense_Mutation SNP C T CPCG0241-F1 Unknown Somatic WXS Illumina HiSeq 2500 SEMA3G 56920 broad.mit.edu hg19 3 52472026 52472026 + Missense_Mutation SNP C A TCGA-EJ-7321-01 Unknown Somatic WXS Illumina GAIIx NEK4 6787 CPCGene hg19 3 52778313 52778313 + Missense_Mutation SNP T C CPCG0374-F1 Unknown Somatic WXS Illumina HiSeq 2500 ITIH3 3699 broad.mit.edu hg19 3 52836460 52836460 + Missense_Mutation SNP C T PR-09-5700-Tumor Unknown Somatic WXS Illumina GAIIx ITIH3 3699 broad.mit.edu hg19 3 52837906 52837906 + Missense_Mutation SNP C T PR-08-2153 Unknown Somatic WGS Illumina GAIIx TKT 7086 CPCGene hg19 3 53262136 53262136 + Missense_Mutation SNP C T CPCG0213-F1 Unknown Somatic WXS Illumina HiSeq 2500 SELK 0 broad.mit.edu hg19 3 53919852 53919852 + Splice_Site SNP C A PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx CCDC66 285331 broad.mit.edu hg19 3 56651182 56651182 + Missense_Mutation SNP G A TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx FAM208A 23272 broad.mit.edu hg19 3 56680823 56680823 + Missense_Mutation SNP T G P04-1084 Unknown Somatic WGS Illumina GAIIx HESX1 8820 broad.mit.edu hg19 3 57233868 57233868 + Missense_Mutation SNP A C P05-3436-Tumor Unknown Somatic WXS Illumina GAIIx DNAH12 201625 CPCGene hg19 3 57394168 57394168 + Missense_Mutation SNP G A CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLMAP 7871 CPCGene hg19 3 57882650 57882650 + Missense_Mutation SNP C G CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 ABHD6 57406 broad.mit.edu hg19 3 58279458 58279458 + Missense_Mutation SNP T G TCGA-J4-A83M-01 Unknown Somatic WXS Illumina GAIIx FAM107A 11170 broad.mit.edu hg19 3 58555516 58555516 + Missense_Mutation SNP C T P04-2641-Tumor Unknown Somatic WXS Illumina GAIIx PTPRG 5793 broad.mit.edu hg19 3 61975305 61975305 + Missense_Mutation SNP A G PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx PTPRG 5793 broad.mit.edu hg19 3 62240850 62240850 + Missense_Mutation SNP T G TCGA-G9-6338-01 Unknown Somatic WXS Illumina GAIIx C3 718 broad.mit.edu hg19 3 62317034 62317034 + Missense_Mutation SNP G A TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx CADPS 8618 broad.mit.edu hg19 3 62518695 62518695 + Missense_Mutation SNP C T PR-04-3113-Tumor Unknown Somatic WXS Illumina GAIIx CADPS 8618 CPCGene hg19 3 62522189 62522189 + Missense_Mutation SNP G A CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 CADPS 8618 broad.mit.edu hg19 3 62535600 62535600 + Missense_Mutation SNP C G TCGA-HC-8213-01 Unknown Somatic WXS Illumina GAIIx CADPS 8618 broad.mit.edu hg19 3 62751641 62751641 + Missense_Mutation SNP G T TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx LRIG1 26018 broad.mit.edu hg19 3 66463350 66463350 + Missense_Mutation SNP T G TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx FAM19A4 151647 CPCGene hg19 3 68802153 68802153 + Missense_Mutation SNP C A CPCG0090-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMF1 7110 broad.mit.edu hg19 3 69072369 69072369 + Missense_Mutation SNP T C P03-871-Tumor Unknown Somatic WXS Illumina GAIIx TMF1 7110 broad.mit.edu hg19 3 69087802 69087802 + Missense_Mutation SNP A C TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx FOXP1 27086 broad.mit.edu hg19 3 71026828 71026828 + Missense_Mutation SNP C G P07-5318 Unknown Somatic WGS Illumina GAIIx FOXP1 27086 broad.mit.edu hg19 3 71037204 71037204 + Missense_Mutation SNP G A TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx FOXP1 27086 CPCGene hg19 3 71050122 71050122 + Splice_Site SNP C T CPCG0256-F1 Unknown Somatic WXS Illumina HiSeq 2500 RYBP 23429 broad.mit.edu hg19 3 72428400 72428400 + Splice_Site SNP A T TCGA-EJ-7330-01 Unknown Somatic WXS Illumina GAIIx RYBP 23429 broad.mit.edu hg19 3 72428496 72428496 + Missense_Mutation SNP T C TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx RYBP 23429 broad.mit.edu hg19 3 72495663 72495663 + Missense_Mutation SNP T C P04-594-Tumor Unknown Somatic WXS Illumina GAIIx CNTN3 5067 broad.mit.edu hg19 3 74474079 74474079 + Missense_Mutation SNP A T TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx ROBO2 6092 broad.mit.edu hg19 3 77147227 77147227 + Missense_Mutation SNP G A TCGA-EJ-5522-01 Unknown Somatic WXS Illumina GAIIx ROBO2 6092 CPCGene hg19 3 77147246 77147246 + Missense_Mutation SNP C T CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 ROBO2 6092 broad.mit.edu hg19 3 77542420 77542420 + Missense_Mutation SNP A T PR-04-1243 Unknown Somatic WGS Illumina GAIIx ROBO2 6092 broad.mit.edu hg19 3 77614158 77614158 + Missense_Mutation SNP T A TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx ROBO2 6092 broad.mit.edu hg19 3 77645776 77645776 + Missense_Mutation SNP G A PR-2762-Tumor Unknown Somatic WXS Illumina GAIIx ROBO2 6092 broad.mit.edu hg19 3 77681773 77681773 + Missense_Mutation SNP T C P07-144 Unknown Somatic WGS Illumina GAIIx ROBO1 6091 broad.mit.edu hg19 3 78667056 78667056 + Missense_Mutation SNP C T TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx VGLL3 389136 broad.mit.edu hg19 3 87018023 87018023 + Missense_Mutation SNP G A TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx C3 718 broad.mit.edu hg19 3 88205229 88205229 + Missense_Mutation SNP T C TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx EPHA3 2042 broad.mit.edu hg19 3 89468541 89468541 + Splice_Site SNP G T TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx EPHA3 2042 CPCGene hg19 3 89521630 89521630 + Missense_Mutation SNP C T CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 EPHA3 2042 broad.mit.edu hg19 3 89528621 89528621 + Missense_Mutation SNP C T TCGA-HC-8213-01 Unknown Somatic WXS Illumina GAIIx CRYBG3 131544 broad.mit.edu hg19 3 97618049 97618049 + Missense_Mutation SNP G C TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx OR5AC2 81050 broad.mit.edu hg19 3 97806040 97806040 + Missense_Mutation SNP G A PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx OR5H6 79295 broad.mit.edu hg19 3 97983602 97983602 + Missense_Mutation SNP T C TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx OR5H6 79295 broad.mit.edu hg19 3 97984008 97984008 + Missense_Mutation SNP T C TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx NIT2 56954 CPCGene hg19 3 100057936 100057936 + Missense_Mutation SNP C T CPCG0123-F1 Unknown Somatic WXS Illumina HiSeq 2500 NIT2 56954 broad.mit.edu hg19 3 100074111 100074111 + Missense_Mutation SNP A G P07-684-Tumor Unknown Somatic WXS Illumina GAIIx LNP1 348801 broad.mit.edu hg19 3 100170628 100170628 + Missense_Mutation SNP A G TCGA-G9-6329-01 Unknown Somatic WXS Illumina GAIIx LNP1 348801 broad.mit.edu hg19 3 100170628 100170628 + Missense_Mutation SNP A G P08-590-Tumor Unknown Somatic WXS Illumina GAIIx LNP1 348801 broad.mit.edu hg19 3 100170628 100170628 + Missense_Mutation SNP A G TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx LNP1 348801 broad.mit.edu hg19 3 100170628 100170628 + Missense_Mutation SNP A G P04-2740-Tumor Unknown Somatic WXS Illumina GAIIx LNP1 348801 broad.mit.edu hg19 3 100170634 100170634 + Missense_Mutation SNP T C TCGA-J4-A67T-01 Unknown Somatic WXS Illumina GAIIx TMEM45A 55076 broad.mit.edu hg19 3 100287665 100287665 + Splice_Site SNP G C TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx GPR128 0 EMBL hg19 3 100374786 100374786 + Missense_Mutation SNP T C EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 ABI3BP 25890 CPCGene hg19 3 100527078 100527078 + Missense_Mutation SNP A T CPCG0268-F1 Unknown Somatic WXS Illumina HiSeq 2500 ABI3BP 25890 broad.mit.edu hg19 3 100569519 100569519 + Missense_Mutation SNP G A P04-1084 Unknown Somatic WGS Illumina GAIIx IMPG2 50939 broad.mit.edu hg19 3 101023020 101023020 + Missense_Mutation SNP T C TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx ZBTB11 27107 CPCGene hg19 3 101395668 101395668 + Missense_Mutation SNP G A CPCG0191-F1 Unknown Somatic WXS Illumina HiSeq 2500 NXPE3 91775 CPCGene hg19 3 101504529 101504529 + Missense_Mutation SNP T A CPCG0199-F1 Unknown Somatic WXS Illumina HiSeq 2500 NFKBIZ 64332 broad.mit.edu hg19 3 101571784 101571784 + Missense_Mutation SNP C A PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx BBX 56987 broad.mit.edu hg19 3 107491592 107491592 + Missense_Mutation SNP A G TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx IFT57 55081 broad.mit.edu hg19 3 107885800 107885800 + Missense_Mutation SNP A G TCGA-G9-6371-01 Unknown Somatic WXS Illumina GAIIx MYH15 22989 broad.mit.edu hg19 3 108117984 108117984 + Missense_Mutation SNP A T TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx KIAA1524 57650 CPCGene hg19 3 108288259 108288259 + Missense_Mutation SNP C G CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 DZIP3 9666 broad.mit.edu hg19 3 108406893 108406893 + Missense_Mutation SNP G A PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx DPPA2 151871 broad.mit.edu hg19 3 109027103 109027103 + Missense_Mutation SNP C T TCGA-HC-A6AO-01 Unknown Somatic WXS Illumina GAIIx PLCXD2 257068 broad.mit.edu hg19 3 111426940 111426940 + Missense_Mutation SNP C T TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx PHLDB2 90102 CPCGene hg19 3 111603288 111603288 + Missense_Mutation SNP C T CPCG0269-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMPRSS7 344805 broad.mit.edu hg19 3 111795980 111795980 + Missense_Mutation SNP G A TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx CCDC80 151887 CPCGene hg19 3 112357169 112357169 + Missense_Mutation SNP A T CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 CD200R1L 344807 broad.mit.edu hg19 3 112538693 112538693 + Missense_Mutation SNP A G PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx CD200R1L 344807 broad.mit.edu hg19 3 112538718 112538718 + Missense_Mutation SNP G A TCGA-J4-A67L-01 Unknown Somatic WXS Illumina GAIIx C3 718 broad.mit.edu hg19 3 112724671 112724671 + Missense_Mutation SNP G A PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx BOC 91653 broad.mit.edu hg19 3 112989717 112989717 + Missense_Mutation SNP A G PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx KIAA2018 0 broad.mit.edu hg19 3 113376119 113376119 + Missense_Mutation SNP C T TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx ATP6V1A 523 broad.mit.edu hg19 3 113507676 113507676 + Missense_Mutation SNP G T TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx ZDHHC23 254887 CPCGene hg19 3 113667665 113667665 + Missense_Mutation SNP A T CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZBTB20 26137 CPCGene hg19 3 114069347 114069347 + Missense_Mutation SNP G A CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZBTB20 26137 broad.mit.edu hg19 3 114069639 114069639 + Missense_Mutation SNP C A TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx C3 718 CPCGene hg19 3 118865919 118865919 + Missense_Mutation SNP T C CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARHGAP31 57514 broad.mit.edu hg19 3 119133914 119133914 + Missense_Mutation SNP A C TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx ADPRH 141 broad.mit.edu hg19 3 119305152 119305152 + Missense_Mutation SNP G A PR-00-1823-Tumor Unknown Somatic WXS Illumina GAIIx NR1I2 8856 CPCGene hg19 3 119526245 119526245 + Missense_Mutation SNP G A CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 NR1I2 8856 broad.mit.edu hg19 3 119530389 119530389 + Missense_Mutation SNP T C TCGA-2A-A8VV-01 Unknown Somatic WXS Illumina GAIIx GSK3B 2932 broad.mit.edu hg19 3 119635000 119635000 + Missense_Mutation SNP G A TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx HGD 3081 broad.mit.edu hg19 3 120365112 120365112 + Splice_Site SNP A G TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx STXBP5L 9515 broad.mit.edu hg19 3 121126355 121126355 + Missense_Mutation SNP G A PR-09-5446-Tumor Unknown Somatic WXS Illumina GAIIx HCLS1 3059 CPCGene hg19 3 121356074 121356074 + Missense_Mutation SNP C T CPCG0251-F1 Unknown Somatic WXS Illumina HiSeq 2500 GOLGB1 2804 broad.mit.edu hg19 3 121416568 121416568 + Missense_Mutation SNP C A TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx GOLGB1 2804 CPCGene hg19 3 121417583 121417583 + Missense_Mutation SNP T C CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 CD86 942 broad.mit.edu hg19 3 121828209 121828209 + Missense_Mutation SNP A T TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx KPNA1 3836 broad.mit.edu hg19 3 122180094 122180094 + Missense_Mutation SNP G A TCGA-YL-A8HO-01 Unknown Somatic WXS Illumina GAIIx DTX3L 151636 CPCGene hg19 3 122288423 122288423 + Missense_Mutation SNP C T CPCG0047-F1 Unknown Somatic WXS Illumina HiSeq 2500 DTX3L 151636 broad.mit.edu hg19 3 122288536 122288536 + Missense_Mutation SNP G C PR-08-4154 Unknown Somatic WGS Illumina GAIIx PARP15 165631 broad.mit.edu hg19 3 122335869 122335869 + Missense_Mutation SNP C T PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx DIRC2 84925 broad.mit.edu hg19 3 122552285 122552285 + Missense_Mutation SNP A C TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx PDIA5 10954 broad.mit.edu hg19 3 122864945 122864945 + Splice_Site SNP G A PR-2762-Tumor Unknown Somatic WXS Illumina GAIIx ADCY5 111 CPCGene hg19 3 123044275 123044275 + Missense_Mutation SNP C T CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 MYLK 4638 broad.mit.edu hg19 3 123383039 123383039 + Missense_Mutation SNP C T TCGA-J4-A83M-01 Unknown Somatic WXS Illumina GAIIx MYLK 4638 broad.mit.edu hg19 3 123471325 123471325 + Missense_Mutation SNP C T PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx KALRN 8997 CPCGene hg19 3 124117692 124117692 + Missense_Mutation SNP C T CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 KALRN 8997 CPCGene hg19 3 124211610 124211610 + Missense_Mutation SNP G A CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 KALRN 8997 CPCGene hg19 3 124211611 124211611 + Missense_Mutation SNP G T CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 ITGB5 3693 broad.mit.edu hg19 3 124483370 124483370 + Missense_Mutation SNP G A PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx SLC12A8 84561 broad.mit.edu hg19 3 124826558 124826558 + Missense_Mutation SNP C T P07-5318 Unknown Somatic WGS Illumina GAIIx ALDH1L1 10840 EMBL hg19 3 125843218 125843218 + Missense_Mutation SNP A T EOPC-07 Unknown Somatic WGS Illumina HiSeq2000 PLXNA1 5361 broad.mit.edu hg19 3 126748827 126748827 + Missense_Mutation SNP G A TCGA-EJ-7325-01 Unknown Somatic WXS Illumina GAIIx PLXNA1 5361 broad.mit.edu hg19 3 126751335 126751335 + Missense_Mutation SNP C T PR-08-4154 Unknown Somatic WGS Illumina GAIIx EEFSEC 60678 broad.mit.edu hg19 3 128060187 128060187 + Missense_Mutation SNP C T PR-03-3125 Unknown Somatic WGS Illumina GAIIx DNAJB8 165721 broad.mit.edu hg19 3 128181921 128181921 + Missense_Mutation SNP C G TCGA-G9-7522-01 Unknown Somatic WGS Illumina GAIIx COPG1 22820 CPCGene hg19 3 128996170 128996170 + Missense_Mutation SNP G T CPCG0078-F1 Unknown Somatic WXS Illumina HiSeq 2500 MBD4 8930 CPCGene hg19 3 129152793 129152793 + Missense_Mutation SNP T C CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 IFT122 55764 broad.mit.edu hg19 3 129188218 129188218 + Missense_Mutation SNP C G TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx PLXND1 23129 broad.mit.edu hg19 3 129279189 129279189 + Missense_Mutation SNP C T PR-09-5702-Tumor Unknown Somatic WXS Illumina GAIIx COL6A5 256076 broad.mit.edu hg19 3 130095106 130095106 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx COL6A5 256076 broad.mit.edu hg19 3 130189738 130189738 + Missense_Mutation SNP G A TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx PIK3R4 30849 CPCGene hg19 3 130422727 130422727 + Missense_Mutation SNP G A CPCG0087-F1 Unknown Somatic WXS Illumina HiSeq 2500 ASTE1 28990 broad.mit.edu hg19 3 130735156 130735156 + Missense_Mutation SNP G C P03-1906-Tumor Unknown Somatic WXS Illumina GAIIx DNAJC13 23317 broad.mit.edu hg19 3 132165395 132165395 + Splice_Site SNP G T TCGA-G9-6377-01 Unknown Somatic WXS Illumina GAIIx NPHP3 27031 broad.mit.edu hg19 3 132440994 132440994 + Missense_Mutation SNP A T P04-1084 Unknown Somatic WGS Illumina GAIIx BFSP2 8419 CPCGene hg19 3 133191257 133191257 + Missense_Mutation SNP C T CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 CDV3 55573 CPCGene hg19 3 133302946 133302946 + Missense_Mutation SNP C T CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 TOPBP1 11073 broad.mit.edu hg19 3 133342926 133342926 + Missense_Mutation SNP T C TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx EPHB1 2047 broad.mit.edu hg19 3 134670794 134670794 + Missense_Mutation SNP C T TCGA-2A-A8W1-01 Unknown Somatic WXS Illumina GAIIx EPHB1 2047 CPCGene hg19 3 134851574 134851574 + Missense_Mutation SNP G A CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 EPHB1 2047 broad.mit.edu hg19 3 134967255 134967255 + Missense_Mutation SNP G A TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx PPP2R3A 5523 broad.mit.edu hg19 3 135722332 135722332 + Missense_Mutation SNP C T TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx MSL2 55167 broad.mit.edu hg19 3 135870947 135870947 + Missense_Mutation SNP T A TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx IL20RB 53833 CPCGene hg19 3 136708392 136708392 + Missense_Mutation SNP G A CPCG0238-F1 Unknown Somatic WXS Illumina HiSeq 2500 A4GNT 51146 broad.mit.edu hg19 3 137849815 137849815 + Missense_Mutation SNP G A TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx PIK3CB 5291 broad.mit.edu hg19 3 138426080 138426080 + Missense_Mutation SNP T C TCGA-G9-6498-01 Unknown Somatic WXS Illumina GAIIx FOXL2NB 401089 CPCGene hg19 3 138668469 138668469 + Missense_Mutation SNP G A CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRR23B 389151 broad.mit.edu hg19 3 138739173 138739173 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx CLSTN2 64084 broad.mit.edu hg19 3 140277663 140277663 + Missense_Mutation SNP G A TCGA-EJ-7315-01 Unknown Somatic WXS Illumina GAIIx TRIM42 287015 broad.mit.edu hg19 3 140401595 140401595 + Missense_Mutation SNP C T PR-04-1243 Unknown Somatic WGS Illumina GAIIx SPSB4 92369 broad.mit.edu hg19 3 140785132 140785132 + Missense_Mutation SNP G A P07-144 Unknown Somatic WGS Illumina GAIIx GRK7 131890 CPCGene hg19 3 141526718 141526718 + Missense_Mutation SNP A C CPCG0336-F1 Unknown Somatic WXS Illumina HiSeq 2500 XRN1 54464 broad.mit.edu hg19 3 142048435 142048435 + Missense_Mutation SNP G C P03-1906-Tumor Unknown Somatic WXS Illumina GAIIx XRN1 54464 broad.mit.edu hg19 3 142094679 142094679 + Missense_Mutation SNP G A PR-05-839-Tumor Unknown Somatic WXS Illumina GAIIx PAQR9 344838 broad.mit.edu hg19 3 142681313 142681313 + Missense_Mutation SNP A T PR-3042 Unknown Somatic WGS Illumina GAIIx CHST2 9435 broad.mit.edu hg19 3 142840957 142840957 + Missense_Mutation SNP C G TCGA-EJ-7315-01 Unknown Somatic WXS Illumina GAIIx SLC9A9 285195 CPCGene hg19 3 143185909 143185909 + Missense_Mutation SNP G A CPCG0191-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZIC4 84107 CPCGene hg19 3 147114027 147114027 + Missense_Mutation SNP G T CPCG0255-F1 Unknown Somatic WXS Illumina HiSeq 2500 HLTF 6596 broad.mit.edu hg19 3 148760005 148760005 + Missense_Mutation SNP A T TCGA-EJ-5521-01 Unknown Somatic WXS Illumina GAIIx HPS3 84343 broad.mit.edu hg19 3 148885755 148885755 + Missense_Mutation SNP C A TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx CP 1356 CPCGene hg19 3 148925376 148925376 + Missense_Mutation SNP G C CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANKUB1 389161 CPCGene hg19 3 149508668 149508668 + Missense_Mutation SNP C A CPCG0265-F1 Unknown Somatic WXS Illumina HiSeq 2500 RNF13 11342 broad.mit.edu hg19 3 149563860 149563860 + Missense_Mutation SNP A G TCGA-J4-A67K-01 Unknown Somatic WXS Illumina GAIIx PFN2 5217 broad.mit.edu hg19 3 149686232 149686232 + Missense_Mutation SNP C A TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx MED12L 116931 CPCGene hg19 3 150877785 150877785 + Missense_Mutation SNP G C CPCG0255-F1 Unknown Somatic WXS Illumina HiSeq 2500 P2RY14 9934 broad.mit.edu hg19 3 150931285 150931285 + Missense_Mutation SNP G T PR-04-3347-Tumor Unknown Somatic WXS Illumina GAIIx P2RY14 9934 broad.mit.edu hg19 3 150931286 150931286 + Missense_Mutation SNP C T PR-04-3347-Tumor Unknown Somatic WXS Illumina GAIIx MED12L 116931 broad.mit.edu hg19 3 151067883 151067883 + Missense_Mutation SNP A G TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx IGSF10 285313 broad.mit.edu hg19 3 151163868 151163868 + Missense_Mutation SNP T C TCGA-EJ-7784-01 Unknown Somatic WXS Illumina GAIIx SUCNR1 56670 CPCGene hg19 3 151599205 151599205 + Missense_Mutation SNP C T CPCG0380-F1 Unknown Somatic WXS Illumina HiSeq 2500 C3 718 broad.mit.edu hg19 3 153202433 153202433 + Missense_Mutation SNP A C TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx DHX36 170506 CPCGene hg19 3 154010425 154010425 + Missense_Mutation SNP A T CPCG0409-F1 Unknown Somatic WXS Illumina HiSeq 2500 DHX36 170506 CPCGene hg19 3 154027473 154027473 + Missense_Mutation SNP C A CPCG0410-F1 Unknown Somatic WXS Illumina HiSeq 2500 MME 4311 CPCGene hg19 3 154836547 154836547 + Missense_Mutation SNP C G CPCG0387-F1 Unknown Somatic WXS Illumina HiSeq 2500 MME 4311 broad.mit.edu hg19 3 154861330 154861330 + Missense_Mutation SNP A G TCGA-G9-6333-01 Unknown Somatic WXS Illumina GAIIx PLCH1 23007 broad.mit.edu hg19 3 155200544 155200544 + Missense_Mutation SNP T C TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx PLCH1 23007 broad.mit.edu hg19 3 155206588 155206588 + Missense_Mutation SNP G A TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx PLCH1 23007 broad.mit.edu hg19 3 155210521 155210521 + Missense_Mutation SNP G A PR-08-556 Unknown Somatic WGS Illumina GAIIx VEPH1 79674 broad.mit.edu hg19 3 157081347 157081347 + Missense_Mutation SNP A G TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx PTX3 5806 CPCGene hg19 3 157155650 157155650 + Missense_Mutation SNP G T CPCG0362-F1 Unknown Somatic WXS Illumina HiSeq 2500 GFM1 85476 CPCGene hg19 3 158384150 158384150 + Missense_Mutation SNP C T CPCG0353-F1 Unknown Somatic WXS Illumina HiSeq 2500 IFT80 57560 CPCGene hg19 3 160003635 160003635 + Missense_Mutation SNP G T CPCG0265-F1 Unknown Somatic WXS Illumina HiSeq 2500 B3GALNT1 8706 broad.mit.edu hg19 3 160803633 160803633 + Missense_Mutation SNP G A TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx SI 6476 CPCGene hg19 3 164700077 164700077 + Missense_Mutation SNP T C CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 SI 6476 CPCGene hg19 3 164700102 164700102 + Missense_Mutation SNP C A CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 SI 6476 broad.mit.edu hg19 3 164709250 164709250 + Missense_Mutation SNP C T TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx SLITRK3 22865 broad.mit.edu hg19 3 164906801 164906801 + Missense_Mutation SNP C A PR-09-5702-Tumor Unknown Somatic WXS Illumina GAIIx SLITRK3 22865 broad.mit.edu hg19 3 164908014 164908014 + Missense_Mutation SNP T C TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx ZBBX 79740 broad.mit.edu hg19 3 167068219 167068219 + Missense_Mutation SNP T C TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx WDR49 151790 broad.mit.edu hg19 3 167319938 167319938 + Missense_Mutation SNP G T TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx GOLIM4 27333 CPCGene hg19 3 167762665 167762665 + Missense_Mutation SNP T G CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 MECOM 2122 broad.mit.edu hg19 3 168810878 168810878 + Missense_Mutation SNP G A TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx MECOM 2122 broad.mit.edu hg19 3 168819875 168819875 + Missense_Mutation SNP C T TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx MECOM 2122 broad.mit.edu hg19 3 168840449 168840449 + Missense_Mutation SNP T C PR-02-254-Tumor Unknown Somatic WXS Illumina GAIIx ACTRT3 84517 broad.mit.edu hg19 3 169486066 169486066 + Missense_Mutation SNP A G TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx TNIK 23043 broad.mit.edu hg19 3 170811675 170811675 + Missense_Mutation SNP T G PR-08-556 Unknown Somatic WGS Illumina GAIIx FNDC3B 64778 broad.mit.edu hg19 3 172096070 172096070 + Missense_Mutation SNP A G TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx SPATA16 83893 broad.mit.edu hg19 3 172642020 172642020 + Missense_Mutation SNP A G PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx NLGN1 22871 broad.mit.edu hg19 3 173322456 173322456 + Missense_Mutation SNP G A TCGA-HC-7820-01 Unknown Somatic WXS Illumina GAIIx NLGN1 22871 CPCGene hg19 3 173997306 173997306 + Missense_Mutation SNP C T CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 PIK3CA 5290 broad.mit.edu hg19 3 178936091 178936091 + Missense_Mutation SNP G A P08-1042 Unknown Somatic WGS Illumina GAIIx PIK3CA 5290 broad.mit.edu hg19 3 178936095 178936095 + Missense_Mutation SNP A C PR-09-2744-Tumor Unknown Somatic WXS Illumina GAIIx PIK3CA 5290 CPCGene hg19 3 178952084 178952084 + Missense_Mutation SNP C T CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 PIK3CA 5290 broad.mit.edu hg19 3 178952085 178952085 + Missense_Mutation SNP A G TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx PIK3CA 5290 CPCGene hg19 3 178952085 178952085 + Missense_Mutation SNP A G CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 MRPL47 57129 broad.mit.edu hg19 3 179320488 179320488 + Missense_Mutation SNP C A TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx PEX5L 51555 broad.mit.edu hg19 3 179605498 179605498 + Missense_Mutation SNP C T TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx TTC14 151613 CPCGene hg19 3 180327512 180327512 + Missense_Mutation SNP C T CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCDC39 339829 CPCGene hg19 3 180359801 180359801 + Missense_Mutation SNP A T CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATP11B 23200 broad.mit.edu hg19 3 182587059 182587059 + Missense_Mutation SNP C T TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx MCF2L2 23101 CPCGene hg19 3 183006978 183006978 + Missense_Mutation SNP T A CPCG0336-F1 Unknown Somatic WXS Illumina HiSeq 2500 ABCC5 10057 broad.mit.edu hg19 3 183667559 183667559 + Missense_Mutation SNP C T TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx HTR3E 285242 CPCGene hg19 3 183823207 183823207 + Missense_Mutation SNP G A CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 DVL3 1857 broad.mit.edu hg19 3 183873548 183873548 + Missense_Mutation SNP A G P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx AP2M1 1173 broad.mit.edu hg19 3 183898655 183898655 + Missense_Mutation SNP C G PR-01-2382-Tumor Unknown Somatic WXS Illumina GAIIx CHRD 8646 broad.mit.edu hg19 3 184100695 184100695 + Missense_Mutation SNP T C PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx CHRD 8646 broad.mit.edu hg19 3 184103929 184103929 + Missense_Mutation SNP A T PR-06-3199 Unknown Somatic WGS Illumina GAIIx CHRD 8646 broad.mit.edu hg19 3 184104857 184104857 + Missense_Mutation SNP A G TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx EHHADH 1962 broad.mit.edu hg19 3 184936017 184936017 + Missense_Mutation SNP A C TCGA-HC-7745-01 Unknown Somatic WXS Illumina GAIIx MAP3K13 9175 CPCGene hg19 3 185155368 185155368 + Missense_Mutation SNP G A CPCG0409-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAP3K13 9175 broad.mit.edu hg19 3 185191427 185191427 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx TRA2B 6434 CPCGene hg19 3 185639810 185639810 + Missense_Mutation SNP C T CPCG0246-F1 Unknown Somatic WXS Illumina HiSeq 2500 AHSG 197 broad.mit.edu hg19 3 186338468 186338468 + Missense_Mutation SNP G A PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx RFC4 5984 broad.mit.edu hg19 3 186508132 186508132 + Missense_Mutation SNP G A PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx RTP1 132112 CPCGene hg19 3 186917416 186917416 + Missense_Mutation SNP C G CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 RTP1 132112 broad.mit.edu hg19 3 186917771 186917771 + Missense_Mutation SNP C A TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx MASP1 5648 broad.mit.edu hg19 3 186947593 186947593 + Missense_Mutation SNP G A P03-1906-Tumor Unknown Somatic WXS Illumina GAIIx MASP1 5648 CPCGene hg19 3 186953989 186953989 + Missense_Mutation SNP A G CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 MASP1 5648 broad.mit.edu hg19 3 186969444 186969444 + Missense_Mutation SNP T C P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx BCL6 604 broad.mit.edu hg19 3 187447543 187447543 + Missense_Mutation SNP C T TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx BCL6 604 broad.mit.edu hg19 3 187447645 187447645 + Missense_Mutation SNP C T TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx LPP 4026 broad.mit.edu hg19 3 188327155 188327155 + Missense_Mutation SNP G T TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx TP63 8626 broad.mit.edu hg19 3 189612175 189612175 + Missense_Mutation SNP C T TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx CCDC50 152137 broad.mit.edu hg19 3 191093065 191093065 + Missense_Mutation SNP G A PR-03-3125 Unknown Somatic WGS Illumina GAIIx HRASLS 57110 CPCGene hg19 3 192973502 192973502 + Missense_Mutation SNP C T CPCG0123-F1 Unknown Somatic WXS Illumina HiSeq 2500 HRASLS 57110 CPCGene hg19 3 192980900 192980900 + Missense_Mutation SNP C T CPCG0078-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATP13A5 344905 broad.mit.edu hg19 3 193051645 193051645 + Missense_Mutation SNP G A TCGA-HC-8256-01 Unknown Somatic WXS Illumina GAIIx OPA1 4976 broad.mit.edu hg19 3 193361334 193361334 + Missense_Mutation SNP G A TCGA-HC-7820-01 Unknown Somatic WXS Illumina GAIIx OPA1 4976 broad.mit.edu hg19 3 193380716 193380716 + Missense_Mutation SNP C G TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx LRRC15 131578 broad.mit.edu hg19 3 194081448 194081448 + Missense_Mutation SNP C T TCGA-EJ-5504-01 Unknown Somatic WXS Illumina GAIIx GP5 2814 broad.mit.edu hg19 3 194118889 194118889 + Missense_Mutation SNP C T TCGA-EJ-7327-01 Unknown Somatic WXS Illumina GAIIx ATP13A3 79572 CPCGene hg19 3 194147938 194147938 + Missense_Mutation SNP T C CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 MUC20 200958 EMBL hg19 3 195453257 195453257 + Missense_Mutation SNP G A EOPC-02 Unknown Somatic WGS Illumina HiSeq2000 MUC4 4585 broad.mit.edu hg19 3 195481223 195481223 + Missense_Mutation SNP G A P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx MUC4 4585 CPCGene hg19 3 195512103 195512103 + Missense_Mutation SNP G A CPCG0196-F1 Unknown Somatic WXS Illumina HiSeq 2500 MUC4 4585 CPCGene hg19 3 195512597 195512597 + Missense_Mutation SNP G A CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 MUC4 4585 CPCGene hg19 3 195512597 195512597 + Missense_Mutation SNP G A CPCG0057-F1 Unknown Somatic WXS Illumina HiSeq 2500 PIGX 54965 CPCGene hg19 3 196449425 196449425 + Missense_Mutation SNP G T CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 PIGX 54965 broad.mit.edu hg19 3 196460770 196460770 + Missense_Mutation SNP A G TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx MFI2 0 broad.mit.edu hg19 3 196744089 196744089 + Missense_Mutation SNP C T TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx DLG1 1739 broad.mit.edu hg19 3 196865222 196865222 + Missense_Mutation SNP G T P05-3859-Tumor Unknown Somatic WXS Illumina GAIIx DLG1 1739 CPCGene hg19 3 197009600 197009600 + Missense_Mutation SNP A G CPCG0090-F1 Unknown Somatic WXS Illumina HiSeq 2500 LMLN 89782 EMBL hg19 3 197765504 197765504 + Missense_Mutation SNP T C EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 ZNF595 152687 broad.mit.edu hg19 4 85888 85888 + Missense_Mutation SNP A T PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx ZNF718 255403 CPCGene hg19 4 155487 155487 + Missense_Mutation SNP C T CPCG0213-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF721 170960 broad.mit.edu hg19 4 435941 435941 + Missense_Mutation SNP T A TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx PDE6B 5158 broad.mit.edu hg19 4 619651 619651 + Missense_Mutation SNP T C TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx DGKQ 1609 broad.mit.edu hg19 4 956320 956320 + Missense_Mutation SNP T C TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx SLC26A1 10861 broad.mit.edu hg19 4 985025 985025 + Missense_Mutation SNP C T TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx UVSSA 57654 CPCGene hg19 4 1348929 1348929 + Missense_Mutation SNP G A CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 WHSC1 0 broad.mit.edu hg19 4 1980396 1980396 + Missense_Mutation SNP C T TCGA-EJ-5504-01 Unknown Somatic WXS Illumina GAIIx NELFA 7469 CPCGene hg19 4 1991489 1991489 + Missense_Mutation SNP G A CPCG0123-F1 Unknown Somatic WXS Illumina HiSeq 2500 HAUS3 79441 broad.mit.edu hg19 4 2233668 2233668 + Missense_Mutation SNP T A PR-05-839-Tumor Unknown Somatic WXS Illumina GAIIx RNF4 6047 broad.mit.edu hg19 4 2514200 2514200 + Missense_Mutation SNP C G P09-628 Unknown Somatic WGS Illumina GAIIx FAM193A 8603 broad.mit.edu hg19 4 2656838 2656838 + Missense_Mutation SNP C T P04-1084 Unknown Somatic WGS Illumina GAIIx NOP14 8602 CPCGene hg19 4 2948228 2948228 + Missense_Mutation SNP C T CPCG0213-F1 Unknown Somatic WXS Illumina HiSeq 2500 HTT 3064 broad.mit.edu hg19 4 3240286 3240286 + Missense_Mutation SNP C T P07-4941 Unknown Somatic WGS Illumina GAIIx RGS12 6002 broad.mit.edu hg19 4 3319513 3319513 + Missense_Mutation SNP C T TCGA-G9-6498-01 Unknown Somatic WXS Illumina GAIIx LRPAP1 4043 broad.mit.edu hg19 4 3521863 3521863 + Missense_Mutation SNP T C P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx OTOP1 133060 broad.mit.edu hg19 4 4199531 4199531 + Missense_Mutation SNP C T TCGA-EJ-7784-01 Unknown Somatic WXS Illumina GAIIx OTOP1 133060 broad.mit.edu hg19 4 4228208 4228208 + Missense_Mutation SNP C G TCGA-2A-A8VV-01 Unknown Somatic WXS Illumina GAIIx LYAR 55646 CPCGene hg19 4 4276399 4276399 + Missense_Mutation SNP T C CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 LYAR 55646 broad.mit.edu hg19 4 4281393 4281393 + Missense_Mutation SNP A T TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx CYTL1 54360 broad.mit.edu hg19 4 5016888 5016888 + Missense_Mutation SNP C T TCGA-CH-5740-01 Unknown Somatic WXS Illumina GAIIx CRMP1 1400 broad.mit.edu hg19 4 5862782 5862782 + Missense_Mutation SNP G A TCGA-EJ-7123-01 Unknown Somatic WXS Illumina GAIIx JAKMIP1 152789 broad.mit.edu hg19 4 6107489 6107489 + Missense_Mutation SNP C T TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx WFS1 7466 broad.mit.edu hg19 4 6302431 6302431 + Missense_Mutation SNP G A TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx PPP2R2C 5522 CPCGene hg19 4 6325220 6325220 + Missense_Mutation SNP G A CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIAA0232 9778 broad.mit.edu hg19 4 6865440 6865440 + Missense_Mutation SNP A G P04-1084 Unknown Somatic WGS Illumina GAIIx SORCS2 57537 broad.mit.edu hg19 4 7398067 7398067 + Missense_Mutation SNP A G P04-2740-Tumor Unknown Somatic WXS Illumina GAIIx SORCS2 57537 CPCGene hg19 4 7684508 7684508 + Missense_Mutation SNP A T CPCG0206-F1 Unknown Somatic WXS Illumina HiSeq 2500 SORCS2 57537 broad.mit.edu hg19 4 7684513 7684513 + Missense_Mutation SNP A T TCGA-EJ-7123-01 Unknown Somatic WXS Illumina GAIIx SORCS2 57537 broad.mit.edu hg19 4 7725571 7725571 + Missense_Mutation SNP G A TCGA-HC-8213-01 Unknown Somatic WXS Illumina GAIIx AFAP1 60312 broad.mit.edu hg19 4 7811388 7811388 + Missense_Mutation SNP G C TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx TRMT44 152992 CPCGene hg19 4 8442561 8442561 + Missense_Mutation SNP G A CPCG0081-F1 Unknown Somatic WXS Illumina HiSeq 2500 DRD5 1816 broad.mit.edu hg19 4 9783921 9783921 + Missense_Mutation SNP G A PR-06-1749 Unknown Somatic WGS Illumina GAIIx ZNF518B 85460 broad.mit.edu hg19 4 10445720 10445720 + Missense_Mutation SNP A G TCGA-G9-6342-01 Unknown Somatic WXS Illumina GAIIx ZNF518B 85460 broad.mit.edu hg19 4 10445820 10445820 + Missense_Mutation SNP G A TCGA-2A-A8VV-01 Unknown Somatic WXS Illumina GAIIx CPEB2 132864 broad.mit.edu hg19 4 15018816 15018816 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx CPEB2 132864 CPCGene hg19 4 15042112 15042112 + Splice_Site SNP G A CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 FBXL5 26234 broad.mit.edu hg19 4 15614033 15614033 + Missense_Mutation SNP A C PR-04-1243 Unknown Somatic WGS Illumina GAIIx CD38 952 broad.mit.edu hg19 4 15835906 15835906 + Missense_Mutation SNP G A TCGA-HC-7820-01 Unknown Somatic WXS Illumina GAIIx FGFBP1 9982 broad.mit.edu hg19 4 15938145 15938145 + Missense_Mutation SNP T G P09-2497-Tumor Unknown Somatic WXS Illumina GAIIx FGFBP2 83888 broad.mit.edu hg19 4 15964674 15964674 + Missense_Mutation SNP C T TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx PROM1 8842 broad.mit.edu hg19 4 16019994 16019994 + Missense_Mutation SNP G A TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx FAM184B 27146 CPCGene hg19 4 17711037 17711037 + Missense_Mutation SNP C T CPCG0255-F1 Unknown Somatic WXS Illumina HiSeq 2500 NCAPG 64151 CPCGene hg19 4 17813935 17813935 + Missense_Mutation SNP T G CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLIT2 9353 CPCGene hg19 4 20543145 20543145 + Missense_Mutation SNP G T CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 PACRGL 133015 CPCGene hg19 4 20714500 20714500 + Missense_Mutation SNP T C CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 GBA3 57733 broad.mit.edu hg19 4 22820436 22820436 + Missense_Mutation SNP G T P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx ANAPC4 29945 CPCGene hg19 4 25408848 25408848 + Missense_Mutation SNP A G CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCKAR 886 broad.mit.edu hg19 4 26484871 26484871 + Missense_Mutation SNP G C TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx TBC1D19 55296 CPCGene hg19 4 26750061 26750061 + Missense_Mutation SNP C T CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARAP2 116984 broad.mit.edu hg19 4 36152654 36152654 + Missense_Mutation SNP T A PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx C4 0 broad.mit.edu hg19 4 37591965 37591965 + Missense_Mutation SNP C T TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx TLR10 81793 broad.mit.edu hg19 4 38776169 38776169 + Missense_Mutation SNP G A TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx TLR1 7096 broad.mit.edu hg19 4 38798749 38798749 + Missense_Mutation SNP C T TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx RFC1 5981 CPCGene hg19 4 39304413 39304413 + Missense_Mutation SNP G C CPCG0047-F1 Unknown Somatic WXS Illumina HiSeq 2500 UGDH 7358 broad.mit.edu hg19 4 39506103 39506103 + Missense_Mutation SNP C T PR-07-4610 Unknown Somatic WGS Illumina GAIIx UGDH 7358 broad.mit.edu hg19 4 39522980 39522980 + Missense_Mutation SNP A G TCGA-J4-A67N-01 Unknown Somatic WXS Illumina GAIIx PDS5A 23244 broad.mit.edu hg19 4 39843623 39843623 + Missense_Mutation SNP G A P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx PDS5A 23244 CPCGene hg19 4 39864608 39864608 + Missense_Mutation SNP G A CPCG0267-F1 Unknown Somatic WXS Illumina HiSeq 2500 PDS5A 23244 CPCGene hg19 4 39875996 39875996 + Missense_Mutation SNP C G CPCG0344-F1 Unknown Somatic WXS Illumina HiSeq 2500 PDS5A 23244 CPCGene hg19 4 39905793 39905793 + Missense_Mutation SNP C T CPCG0232-F1 Unknown Somatic WXS Illumina HiSeq 2500 N4BP2 55728 broad.mit.edu hg19 4 40119567 40119567 + Missense_Mutation SNP A G TCGA-EJ-7123-01 Unknown Somatic WXS Illumina GAIIx RBM47 54502 broad.mit.edu hg19 4 40427943 40427943 + Missense_Mutation SNP G A PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx NSUN7 79730 CPCGene hg19 4 40752785 40752785 + Missense_Mutation SNP G T CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATP8A1 10396 broad.mit.edu hg19 4 42454010 42454010 + Missense_Mutation SNP C G PR-03-3125 Unknown Somatic WGS Illumina GAIIx GRXCR1 389207 broad.mit.edu hg19 4 42895345 42895345 + Missense_Mutation SNP C T TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx GUF1 60558 broad.mit.edu hg19 4 44682800 44682800 + Missense_Mutation SNP G A TCGA-QU-A6IP-01 Unknown Somatic WXS Illumina GAIIx GABRG1 2565 broad.mit.edu hg19 4 46043212 46043212 + Missense_Mutation SNP C T PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx GABRG1 2565 CPCGene hg19 4 46060593 46060593 + Missense_Mutation SNP G A CPCG0256-F1 Unknown Somatic WXS Illumina HiSeq 2500 GABRG1 2565 broad.mit.edu hg19 4 46067417 46067417 + Missense_Mutation SNP C T TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx GABRG1 2565 broad.mit.edu hg19 4 46067560 46067560 + Missense_Mutation SNP G T TCGA-EJ-5509-01 Unknown Somatic WXS Illumina GAIIx GABRA4 2557 CPCGene hg19 4 46979478 46979478 + Missense_Mutation SNP G T CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 GABRA4 2557 CPCGene hg19 4 46979479 46979479 + Missense_Mutation SNP G T CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 GABRB1 2560 broad.mit.edu hg19 4 47427856 47427856 + Missense_Mutation SNP C T TCGA-FC-7708-01 Unknown Somatic WXS Illumina GAIIx NFXL1 152518 broad.mit.edu hg19 4 47853122 47853122 + Missense_Mutation SNP C A P06-1125-Tumor Unknown Somatic WXS Illumina GAIIx CNGA1 1259 broad.mit.edu hg19 4 47938768 47938768 + Missense_Mutation SNP G C TCGA-HC-7748-01 Unknown Somatic WXS Illumina GAIIx SLAIN2 57606 broad.mit.edu hg19 4 48371866 48371866 + Missense_Mutation SNP G T TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx FRYL 285527 broad.mit.edu hg19 4 48551612 48551612 + Missense_Mutation SNP C T TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx OCIAD1 54940 broad.mit.edu hg19 4 48851971 48851971 + Missense_Mutation SNP T C TCGA-EJ-5522-01 Unknown Somatic WXS Illumina GAIIx LRRC66 339977 broad.mit.edu hg19 4 52861337 52861337 + Missense_Mutation SNP C G PR-09-2744-Tumor Unknown Somatic WXS Illumina GAIIx LRRC66 339977 CPCGene hg19 4 52883776 52883776 + Missense_Mutation SNP T C CPCG0232-F1 Unknown Somatic WXS Illumina HiSeq 2500 LNX1 84708 broad.mit.edu hg19 4 54440053 54440053 + Missense_Mutation SNP G A TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx PDGFRA 5156 broad.mit.edu hg19 4 55141055 55141055 + Missense_Mutation SNP A G TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx PDGFRA 5156 CPCGene hg19 4 55155051 55155051 + Missense_Mutation SNP C T CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIT 3815 broad.mit.edu hg19 4 55593464 55593464 + Missense_Mutation SNP A C TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx KIT 3815 broad.mit.edu hg19 4 55602765 55602765 + Missense_Mutation SNP G C TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx KDR 3791 broad.mit.edu hg19 4 55979558 55979558 + Missense_Mutation SNP C T TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx SRD5A3 79644 CPCGene hg19 4 56230378 56230378 + Missense_Mutation SNP G A CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 CLOCK 9575 CPCGene hg19 4 56319907 56319907 + Missense_Mutation SNP T A CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 EXOC1 55763 broad.mit.edu hg19 4 56744213 56744213 + Missense_Mutation SNP A G TCGA-EJ-7781-01 Unknown Somatic WXS Illumina GAIIx KIAA1211 57482 broad.mit.edu hg19 4 57181022 57181022 + Missense_Mutation SNP G A TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx KIAA1211 57482 broad.mit.edu hg19 4 57181158 57181158 + Missense_Mutation SNP C T P03-1426 Unknown Somatic WGS Illumina GAIIx KIAA1211 57482 broad.mit.edu hg19 4 57181439 57181439 + Missense_Mutation SNP G T TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx PPAT 5471 broad.mit.edu hg19 4 57273840 57273840 + Missense_Mutation SNP C G TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx THEGL 100506564 CPCGene hg19 4 57397075 57397075 + Missense_Mutation SNP A C CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 POLR2B 5431 broad.mit.edu hg19 4 57891636 57891636 + Missense_Mutation SNP A C PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx POLR2B 5431 CPCGene hg19 4 57897089 57897089 + Missense_Mutation SNP G A CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 LPHN3 0 broad.mit.edu hg19 4 62599226 62599226 + Missense_Mutation SNP C T TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx LPHN3 0 broad.mit.edu hg19 4 62679557 62679557 + Missense_Mutation SNP T A TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx LPHN3 0 broad.mit.edu hg19 4 62800668 62800668 + Missense_Mutation SNP G A TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx LPHN3 0 broad.mit.edu hg19 4 62813870 62813870 + Missense_Mutation SNP G A TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx LPHN3 0 broad.mit.edu hg19 4 62813888 62813888 + Missense_Mutation SNP G T TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx LPHN3 0 broad.mit.edu hg19 4 62936320 62936320 + Missense_Mutation SNP A T PR-07-4610 Unknown Somatic WGS Illumina GAIIx TECRL 253017 broad.mit.edu hg19 4 65275040 65275040 + Missense_Mutation SNP C T PR-07-4610 Unknown Somatic WGS Illumina GAIIx CENPC 1060 broad.mit.edu hg19 4 68358586 68358586 + Splice_Site SNP C T TCGA-ZG-A8QX-01 Unknown Somatic WXS Illumina GAIIx UGT2B10 7365 CPCGene hg19 4 69885564 69885564 + Missense_Mutation SNP A G CPCG0237-F1 Unknown Somatic WXS Illumina HiSeq 2500 UGT2B7 7364 broad.mit.edu hg19 4 69962788 69962788 + Missense_Mutation SNP A G TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx UGT2B7 7364 broad.mit.edu hg19 4 69973826 69973826 + Missense_Mutation SNP C A TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx UGT2B11 10720 broad.mit.edu hg19 4 70066349 70066349 + Missense_Mutation SNP C A TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx UGT2B11 10720 broad.mit.edu hg19 4 70079956 70079956 + Missense_Mutation SNP G A P04-2740-Tumor Unknown Somatic WXS Illumina GAIIx PRR27 401137 CPCGene hg19 4 71024466 71024466 + Missense_Mutation SNP C T CPCG0373-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRR27 401137 CPCGene hg19 4 71024467 71024467 + Missense_Mutation SNP T G CPCG0373-F1 Unknown Somatic WXS Illumina HiSeq 2500 CSN3 1448 broad.mit.edu hg19 4 71114807 71114807 + Missense_Mutation SNP C A PR-07-4610 Unknown Somatic WGS Illumina GAIIx AMTN 401138 CPCGene hg19 4 71388524 71388524 + Missense_Mutation SNP G C CPCG0232-F1 Unknown Somatic WXS Illumina HiSeq 2500 AMTN 401138 broad.mit.edu hg19 4 71396842 71396842 + Missense_Mutation SNP C A P07-144 Unknown Somatic WGS Illumina GAIIx UTP3 57050 broad.mit.edu hg19 4 71555463 71555463 + Missense_Mutation SNP G C PR-00-1823-Tumor Unknown Somatic WXS Illumina GAIIx GC 2638 broad.mit.edu hg19 4 72623867 72623867 + Missense_Mutation SNP T C TCGA-HC-8259-01 Unknown Somatic WXS Illumina GAIIx ADAMTS3 9508 broad.mit.edu hg19 4 73186558 73186558 + Missense_Mutation SNP T A TCGA-VP-A87C-01 Unknown Somatic WXS Illumina GAIIx ADAMTS3 9508 broad.mit.edu hg19 4 73414286 73414286 + Missense_Mutation SNP C T TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx COX18 285521 broad.mit.edu hg19 4 73931122 73931122 + Missense_Mutation SNP T A P07-5318 Unknown Somatic WGS Illumina GAIIx ANKRD17 26057 CPCGene hg19 4 73942742 73942742 + Missense_Mutation SNP A C CPCG0217-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANKRD17 26057 broad.mit.edu hg19 4 73968249 73968249 + Missense_Mutation SNP G A TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx RCHY1 25898 broad.mit.edu hg19 4 76417113 76417113 + Missense_Mutation SNP G T TCGA-EJ-7327-01 Unknown Somatic WXS Illumina GAIIx PPEF2 5470 CPCGene hg19 4 76793244 76793244 + Missense_Mutation SNP G T CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 PPEF2 5470 broad.mit.edu hg19 4 76813087 76813087 + Missense_Mutation SNP C T TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx STBD1 8987 broad.mit.edu hg19 4 77231074 77231074 + Missense_Mutation SNP G A PR-09-2517-Tumor Unknown Somatic WXS Illumina GAIIx SHROOM3 57619 broad.mit.edu hg19 4 77661470 77661470 + Missense_Mutation SNP A G TCGA-HC-8256-01 Unknown Somatic WXS Illumina GAIIx SOWAHB 345079 broad.mit.edu hg19 4 77818646 77818646 + Missense_Mutation SNP C A P05-3852 Unknown Somatic WGS Illumina GAIIx CNOT6L 246175 CPCGene hg19 4 78678033 78678033 + Missense_Mutation SNP A G CPCG0217-F1 Unknown Somatic WXS Illumina HiSeq 2500 MRPL1 65008 broad.mit.edu hg19 4 78815325 78815325 + Missense_Mutation SNP C T TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx FRAS1 80144 broad.mit.edu hg19 4 79334179 79334179 + Missense_Mutation SNP G A TCGA-HC-7736-01 Unknown Somatic WXS Illumina GAIIx FRAS1 80144 broad.mit.edu hg19 4 79343065 79343065 + Missense_Mutation SNP C T TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx BMP2K 55589 broad.mit.edu hg19 4 79786791 79786791 + Missense_Mutation SNP C T TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx BMP2K 55589 broad.mit.edu hg19 4 79832021 79832021 + Missense_Mutation SNP G A TCGA-HC-8259-01 Unknown Somatic WXS Illumina GAIIx BMP3 651 broad.mit.edu hg19 4 81967606 81967606 + Missense_Mutation SNP G A TCGA-2A-A8W1-01 Unknown Somatic WXS Illumina GAIIx BMP3 651 broad.mit.edu hg19 4 81967610 81967610 + Missense_Mutation SNP G C TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx PRKG2 5593 broad.mit.edu hg19 4 82064095 82064095 + Missense_Mutation SNP G A TCGA-HC-7745-01 Unknown Somatic WXS Illumina GAIIx HPSE 10855 broad.mit.edu hg19 4 84216580 84216580 + Missense_Mutation SNP G A P05-620 Unknown Somatic WGS Illumina GAIIx HPSE 10855 CPCGene hg19 4 84255901 84255901 + Missense_Mutation SNP G C CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 HELQ 113510 broad.mit.edu hg19 4 84368107 84368107 + Missense_Mutation SNP T C TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx WDFY3 23001 broad.mit.edu hg19 4 85704208 85704208 + Missense_Mutation SNP T A P07-5037 Unknown Somatic WGS Illumina GAIIx KLHL8 57563 CPCGene hg19 4 88091625 88091625 + Missense_Mutation SNP C T CPCG0387-F1 Unknown Somatic WXS Illumina HiSeq 2500 MEPE 56955 broad.mit.edu hg19 4 88767470 88767470 + Missense_Mutation SNP G A P07-5037 Unknown Somatic WGS Illumina GAIIx PKD2 5311 broad.mit.edu hg19 4 88989084 88989084 + Missense_Mutation SNP G A TCGA-HC-8256-01 Unknown Somatic WXS Illumina GAIIx ABCG2 9429 broad.mit.edu hg19 4 89013441 89013441 + Missense_Mutation SNP A G TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx PPM1K 152926 broad.mit.edu hg19 4 89183862 89183862 + Missense_Mutation SNP G A TCGA-EJ-7797-01 Unknown Somatic WXS Illumina GAIIx FAM13A 10144 broad.mit.edu hg19 4 89671667 89671667 + Missense_Mutation SNP G C TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx FAM13A 10144 broad.mit.edu hg19 4 89702352 89702352 + Missense_Mutation SNP T C TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx MMRN1 22915 CPCGene hg19 4 90816642 90816642 + Missense_Mutation SNP G C CPCG0373-F1 Unknown Somatic WXS Illumina HiSeq 2500 MMRN1 22915 CPCGene hg19 4 90816642 90816642 + Missense_Mutation SNP G T CPCG0373-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCSER1 401145 broad.mit.edu hg19 4 91229663 91229663 + Missense_Mutation SNP T C TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx GRID2 2895 broad.mit.edu hg19 4 94138039 94138039 + Missense_Mutation SNP G T TCGA-J4-A6M7-01 Unknown Somatic WXS Illumina GAIIx GRID2 2895 CPCGene hg19 4 94376856 94376856 + Missense_Mutation SNP G A CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATOH1 474 broad.mit.edu hg19 4 94750559 94750559 + Missense_Mutation SNP G A TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx ATOH1 474 broad.mit.edu hg19 4 94750645 94750645 + Missense_Mutation SNP A G TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx SMARCAD1 56916 broad.mit.edu hg19 4 95170839 95170839 + Missense_Mutation SNP G A TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx EIF4E 1977 broad.mit.edu hg19 4 99823091 99823091 + Missense_Mutation SNP T G TCGA-VP-A87J-01 Unknown Somatic WXS Illumina GAIIx ADH4 127 broad.mit.edu hg19 4 100052733 100052733 + Missense_Mutation SNP C A TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx ADH1B 125 broad.mit.edu hg19 4 100237249 100237249 + Missense_Mutation SNP G T TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx MTTP 4547 broad.mit.edu hg19 4 100532498 100532498 + Missense_Mutation SNP G A P05-1657 Unknown Somatic WGS Illumina GAIIx PPP3CA 5530 broad.mit.edu hg19 4 102001731 102001731 + Missense_Mutation SNP T A TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx BANK1 55024 CPCGene hg19 4 102951144 102951144 + Missense_Mutation SNP G T CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 NFKB1 4790 CPCGene hg19 4 103537634 103537634 + Missense_Mutation SNP G A CPCG0047-F1 Unknown Somatic WXS Illumina HiSeq 2500 MANBA 4126 broad.mit.edu hg19 4 103553368 103553368 + Missense_Mutation SNP C T P09-37 Unknown Somatic WGS Illumina GAIIx MANBA 4126 broad.mit.edu hg19 4 103595132 103595132 + Missense_Mutation SNP T C PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx MANBA 4126 broad.mit.edu hg19 4 103611845 103611845 + Missense_Mutation SNP C T TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx SLC9B1 150159 CPCGene hg19 4 103870528 103870528 + Missense_Mutation SNP G A CPCG0210-F1 Unknown Somatic WXS Illumina HiSeq 2500 TET2 54790 CPCGene hg19 4 106162586 106162586 + Missense_Mutation SNP G A CPCG0258-F1 Unknown Somatic WXS Illumina HiSeq 2500 TET2 54790 CPCGene hg19 4 106196951 106196951 + Missense_Mutation SNP A G CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 TBCK 93627 broad.mit.edu hg19 4 107037516 107037516 + Missense_Mutation SNP A T PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx TBCK 93627 broad.mit.edu hg19 4 107216263 107216263 + Missense_Mutation SNP C G TCGA-G9-6363-01 Unknown Somatic WXS Illumina GAIIx ETNPPL 64850 broad.mit.edu hg19 4 109675832 109675832 + Missense_Mutation SNP T A TCGA-HC-8261-01 Unknown Somatic WXS Illumina GAIIx COL25A1 84570 CPCGene hg19 4 109740478 109740478 + Missense_Mutation SNP C T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 COL25A1 84570 broad.mit.edu hg19 4 109767343 109767343 + Missense_Mutation SNP G A TCGA-J4-A67T-01 Unknown Somatic WXS Illumina GAIIx COL25A1 84570 broad.mit.edu hg19 4 109780836 109780836 + Missense_Mutation SNP G A PR-08-2153 Unknown Somatic WGS Illumina GAIIx COL25A1 84570 broad.mit.edu hg19 4 109784483 109784483 + Missense_Mutation SNP C T TCGA-EJ-7314-01 Unknown Somatic WXS Illumina GAIIx EGF 1950 broad.mit.edu hg19 4 110834588 110834588 + Missense_Mutation SNP C G P05-620 Unknown Somatic WGS Illumina GAIIx EGF 1950 broad.mit.edu hg19 4 110864414 110864414 + Missense_Mutation SNP T G TCGA-EJ-7218-01 Unknown Somatic WXS Illumina GAIIx ELOVL6 79071 broad.mit.edu hg19 4 110972797 110972797 + Missense_Mutation SNP C T TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx TIFA 92610 broad.mit.edu hg19 4 113199473 113199473 + Missense_Mutation SNP T C TCGA-G9-7519-01 Unknown Somatic WXS Illumina GAIIx ALPK1 80216 broad.mit.edu hg19 4 113353285 113353285 + Missense_Mutation SNP T C TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx ANK2 287 CPCGene hg19 4 114209556 114209556 + Missense_Mutation SNP C A CPCG0374-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANK2 287 CPCGene hg19 4 114275488 114275488 + Missense_Mutation SNP C T CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANK2 287 broad.mit.edu hg19 4 114276923 114276923 + Missense_Mutation SNP G T PR-2740-Tumor Unknown Somatic WXS Illumina GAIIx ANK2 287 CPCGene hg19 4 114278820 114278820 + Missense_Mutation SNP G A CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANK2 287 broad.mit.edu hg19 4 114278919 114278919 + Missense_Mutation SNP C T PR-09-2744-Tumor Unknown Somatic WXS Illumina GAIIx ANK2 287 broad.mit.edu hg19 4 114288728 114288728 + Missense_Mutation SNP C T P08-716 Unknown Somatic WGS Illumina GAIIx ARSJ 79642 broad.mit.edu hg19 4 114899962 114899962 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx NDST3 9348 broad.mit.edu hg19 4 119059263 119059263 + Missense_Mutation SNP G A TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx METTL14 57721 broad.mit.edu hg19 4 119631282 119631282 + Missense_Mutation SNP C T TCGA-EJ-7784-01 Unknown Somatic WXS Illumina GAIIx SYNPO2 171024 broad.mit.edu hg19 4 119952692 119952692 + Missense_Mutation SNP C G P07-5037 Unknown Somatic WGS Illumina GAIIx SYNPO2 171024 CPCGene hg19 4 119958283 119958283 + Missense_Mutation SNP G C CPCG0324-F1 Unknown Somatic WXS Illumina HiSeq 2500 SYNPO2 171024 broad.mit.edu hg19 4 119978626 119978626 + Missense_Mutation SNP A G TCGA-G9-6377-01 Unknown Somatic WXS Illumina GAIIx MAD2L1 4085 broad.mit.edu hg19 4 120982029 120982029 + Missense_Mutation SNP A G TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx TNIP3 79931 CPCGene hg19 4 122079860 122079860 + Missense_Mutation SNP T G CPCG0348-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIAA1109 84162 broad.mit.edu hg19 4 123122253 123122253 + Missense_Mutation SNP C T P09-1580-Tumor Unknown Somatic WXS Illumina GAIIx KIAA1109 84162 CPCGene hg19 4 123128414 123128414 + Missense_Mutation SNP G T CPCG0003-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAD1 132612 CPCGene hg19 4 123332493 123332493 + Missense_Mutation SNP T C CPCG0410-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPATA5 166378 broad.mit.edu hg19 4 123868606 123868606 + Missense_Mutation SNP C T TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx FAT4 79633 broad.mit.edu hg19 4 126329789 126329789 + Missense_Mutation SNP T C TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx FAT4 79633 broad.mit.edu hg19 4 126329789 126329789 + Missense_Mutation SNP T C TCGA-Y6-A8TL-01 Unknown Somatic WXS Illumina GAIIx FAT4 79633 broad.mit.edu hg19 4 126337635 126337635 + Missense_Mutation SNP C G TCGA-EJ-5542-01 Unknown Somatic WXS Illumina GAIIx FAT4 79633 CPCGene hg19 4 126369688 126369688 + Missense_Mutation SNP C T CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAT4 79633 CPCGene hg19 4 126389860 126389860 + Missense_Mutation SNP C T CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAT4 79633 broad.mit.edu hg19 4 126408586 126408586 + Missense_Mutation SNP C T TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx FAT4 79633 CPCGene hg19 4 126411606 126411606 + Missense_Mutation SNP G A CPCG0387-F1 Unknown Somatic WXS Illumina HiSeq 2500 INTU 27152 broad.mit.edu hg19 4 128626838 128626838 + Missense_Mutation SNP A G TCGA-G9-6342-01 Unknown Somatic WXS Illumina GAIIx HSPA4L 22824 CPCGene hg19 4 128716951 128716951 + Missense_Mutation SNP A T CPCG0258-F1 Unknown Somatic WXS Illumina HiSeq 2500 HSPA4L 22824 broad.mit.edu hg19 4 128726278 128726278 + Missense_Mutation SNP C T TCGA-EJ-7314-01 Unknown Somatic WXS Illumina GAIIx MFSD8 256471 broad.mit.edu hg19 4 128843022 128843022 + Missense_Mutation SNP C G TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx LARP1B 55132 broad.mit.edu hg19 4 129121699 129121699 + Missense_Mutation SNP C T TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx PCDH18 54510 broad.mit.edu hg19 4 138449742 138449742 + Missense_Mutation SNP T A TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx PCDH18 54510 broad.mit.edu hg19 4 138451634 138451634 + Missense_Mutation SNP C A TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx CCRN4L 0 broad.mit.edu hg19 4 139937151 139937151 + Missense_Mutation SNP C T P05-620 Unknown Somatic WGS Illumina GAIIx MAML3 55534 broad.mit.edu hg19 4 140641036 140641036 + Missense_Mutation SNP A T TCGA-HC-7075-01 Unknown Somatic WGS Illumina GAIIx TBC1D9 23158 broad.mit.edu hg19 4 141598253 141598253 + Missense_Mutation SNP T C PR-05-3595 Unknown Somatic WGS Illumina GAIIx INPP4B 8821 broad.mit.edu hg19 4 143081698 143081698 + Missense_Mutation SNP T A PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx USP38 84640 CPCGene hg19 4 144118982 144118982 + Missense_Mutation SNP A C CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 SMARCA5 8467 broad.mit.edu hg19 4 144449073 144449073 + Missense_Mutation SNP C T TCGA-EJ-7321-01 Unknown Somatic WXS Illumina GAIIx SMARCA5 8467 broad.mit.edu hg19 4 144466687 144466687 + Missense_Mutation SNP A T TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx FREM3 166752 CPCGene hg19 4 144620599 144620599 + Missense_Mutation SNP G A CPCG0358-F1 Unknown Somatic WXS Illumina HiSeq 2500 FREM3 166752 broad.mit.edu hg19 4 144621566 144621566 + Missense_Mutation SNP C T PR-03-3125 Unknown Somatic WGS Illumina GAIIx GYPB 2994 CPCGene hg19 4 144922436 144922436 + Missense_Mutation SNP T G CPCG0114-F1 Unknown Somatic WXS Illumina HiSeq 2500 SMAD1 4086 CPCGene hg19 4 146461117 146461117 + Missense_Mutation SNP C A CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 POU4F2 5458 broad.mit.edu hg19 4 147560493 147560493 + Missense_Mutation SNP A C TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx TMEM184C 55751 broad.mit.edu hg19 4 148545026 148545026 + Missense_Mutation SNP T G TCGA-G9-6364-01 Unknown Somatic WXS Illumina GAIIx NR3C2 4306 EMBL hg19 4 149357801 149357801 + Missense_Mutation SNP A G EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 MAB21L2 10586 CPCGene hg19 4 151505073 151505073 + Missense_Mutation SNP G A CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 SH3D19 152503 CPCGene hg19 4 152049406 152049406 + Missense_Mutation SNP C G CPCG0047-F1 Unknown Somatic WXS Illumina HiSeq 2500 FBXW7 55294 CPCGene hg19 4 153268131 153268131 + Missense_Mutation SNP G A CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 TIGD4 201798 broad.mit.edu hg19 4 153690842 153690842 + Missense_Mutation SNP T C TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx TIGD4 201798 CPCGene hg19 4 153691418 153691418 + Missense_Mutation SNP A T CPCG0251-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIAA0922 23240 broad.mit.edu hg19 4 154544128 154544128 + Missense_Mutation SNP C T P05-3859-Tumor Unknown Somatic WXS Illumina GAIIx RNF175 285533 broad.mit.edu hg19 4 154633694 154633694 + Missense_Mutation SNP C T PR-05-3595 Unknown Somatic WGS Illumina GAIIx SFRP2 6423 broad.mit.edu hg19 4 154709941 154709941 + Missense_Mutation SNP T C TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx DCHS2 54798 broad.mit.edu hg19 4 155254287 155254287 + Missense_Mutation SNP C T TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx DCHS2 54798 CPCGene hg19 4 155254491 155254491 + Missense_Mutation SNP C T CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 DCHS2 54798 broad.mit.edu hg19 4 155256174 155256174 + Missense_Mutation SNP C G TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx DCHS2 54798 broad.mit.edu hg19 4 155298426 155298426 + Missense_Mutation SNP G T PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx FGB 2244 CPCGene hg19 4 155490857 155490857 + Missense_Mutation SNP A G CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 FGB 2244 broad.mit.edu hg19 4 155490938 155490938 + Missense_Mutation SNP G T TCGA-Y6-A8TL-01 Unknown Somatic WXS Illumina GAIIx FGA 2243 broad.mit.edu hg19 4 155505758 155505758 + Missense_Mutation SNP A G P00-000450-Tumor Unknown Somatic WXS Illumina GAIIx FGA 2243 broad.mit.edu hg19 4 155506852 155506852 + Missense_Mutation SNP A G TCGA-G9-6365-01 Unknown Somatic WGS Illumina GAIIx FGG 2266 broad.mit.edu hg19 4 155528084 155528084 + Missense_Mutation SNP C T PR-09-2744-Tumor Unknown Somatic WXS Illumina GAIIx FGG 2266 broad.mit.edu hg19 4 155532986 155532986 + Missense_Mutation SNP T C TCGA-EJ-5542-01 Unknown Somatic WXS Illumina GAIIx RBM46 166863 broad.mit.edu hg19 4 155719382 155719382 + Missense_Mutation SNP T G TCGA-J4-A83N-01 Unknown Somatic WXS Illumina GAIIx MAP9 79884 broad.mit.edu hg19 4 156294346 156294346 + Missense_Mutation SNP T G P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx GUCY1A3 2982 broad.mit.edu hg19 4 156634697 156634697 + Missense_Mutation SNP C T PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx TDO2 6999 CPCGene hg19 4 156828879 156828879 + Missense_Mutation SNP G A CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 TDO2 6999 broad.mit.edu hg19 4 156835562 156835562 + Missense_Mutation SNP C T TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx GRIA2 2891 broad.mit.edu hg19 4 158238830 158238830 + Missense_Mutation SNP T C TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx RXFP1 59350 CPCGene hg19 4 159559164 159559164 + Missense_Mutation SNP C A CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 FNIP2 57600 broad.mit.edu hg19 4 159782889 159782889 + Missense_Mutation SNP G T TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx NPY1R 4886 CPCGene hg19 4 164246559 164246559 + Missense_Mutation SNP C A CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 NPY1R 4886 broad.mit.edu hg19 4 164247226 164247226 + Missense_Mutation SNP C A TCGA-EJ-7327-01 Unknown Somatic WXS Illumina GAIIx TMEM192 201931 broad.mit.edu hg19 4 166009709 166009709 + Missense_Mutation SNP G A TCGA-EJ-7783-01 Unknown Somatic WXS Illumina GAIIx TMEM192 201931 broad.mit.edu hg19 4 166021832 166021832 + Missense_Mutation SNP G T TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx KLHL2 11275 broad.mit.edu hg19 4 166234520 166234520 + Splice_Site SNP T C TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx DDX60 55601 CPCGene hg19 4 169167629 169167629 + Missense_Mutation SNP C T CPCG0241-F1 Unknown Somatic WXS Illumina HiSeq 2500 DDX60 55601 broad.mit.edu hg19 4 169173727 169173727 + Missense_Mutation SNP C T TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx DDX60 55601 CPCGene hg19 4 169227650 169227650 + Missense_Mutation SNP G A CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 DDX60L 91351 broad.mit.edu hg19 4 169300651 169300651 + Missense_Mutation SNP T C TCGA-G9-6364-01 Unknown Somatic WXS Illumina GAIIx DDX60L 91351 broad.mit.edu hg19 4 169337892 169337892 + Missense_Mutation SNP A C TCGA-EJ-7123-01 Unknown Somatic WXS Illumina GAIIx SH3RF1 57630 broad.mit.edu hg19 4 170043281 170043281 + Missense_Mutation SNP G T P03-1426 Unknown Somatic WGS Illumina GAIIx MFAP3L 9848 broad.mit.edu hg19 4 170912697 170912697 + Missense_Mutation SNP G C TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx FBXO8 26269 broad.mit.edu hg19 4 175180938 175180938 + Missense_Mutation SNP T C TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx FBXO8 26269 broad.mit.edu hg19 4 175184199 175184199 + Missense_Mutation SNP T C TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx HPGD 3248 broad.mit.edu hg19 4 175416699 175416699 + Missense_Mutation SNP C A TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx GLRA3 8001 CPCGene hg19 4 175649778 175649778 + Missense_Mutation SNP G A CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAM29 11086 broad.mit.edu hg19 4 175897613 175897613 + Missense_Mutation SNP T C TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx ADAM29 11086 broad.mit.edu hg19 4 175897699 175897699 + Missense_Mutation SNP C G PR-09-5630-Tumor Unknown Somatic WXS Illumina GAIIx ADAM29 11086 broad.mit.edu hg19 4 175898106 175898106 + Missense_Mutation SNP A G TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx ADAM29 11086 broad.mit.edu hg19 4 175898319 175898319 + Missense_Mutation SNP A G P08-217 Unknown Somatic WGS Illumina GAIIx WDR17 116966 broad.mit.edu hg19 4 177058695 177058695 + Missense_Mutation SNP G A TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx WDR17 116966 broad.mit.edu hg19 4 177083293 177083293 + Missense_Mutation SNP G A TCGA-EJ-5521-01 Unknown Somatic WXS Illumina GAIIx WDR17 116966 broad.mit.edu hg19 4 177098285 177098285 + Missense_Mutation SNP G A TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx VEGFC 7424 broad.mit.edu hg19 4 177648971 177648971 + Missense_Mutation SNP C A P06-1125-Tumor Unknown Somatic WXS Illumina GAIIx VEGFC 7424 broad.mit.edu hg19 4 177650866 177650866 + Missense_Mutation SNP C G TCGA-CH-5790-01 Unknown Somatic WXS Illumina GAIIx TENM3 55714 CPCGene hg19 4 183574924 183574924 + Missense_Mutation SNP C A CPCG0409-F1 Unknown Somatic WXS Illumina HiSeq 2500 TENM3 55714 CPCGene hg19 4 183594167 183594167 + Missense_Mutation SNP G T CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 TENM3 55714 broad.mit.edu hg19 4 183675933 183675933 + Missense_Mutation SNP C T TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx TENM3 55714 broad.mit.edu hg19 4 183676360 183676360 + Missense_Mutation SNP A T TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx CDKN2AIP 55602 CPCGene hg19 4 184368548 184368548 + Missense_Mutation SNP C G CPCG0090-F1 Unknown Somatic WXS Illumina HiSeq 2500 CASP3 836 broad.mit.edu hg19 4 185550435 185550435 + Missense_Mutation SNP A T P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx SLC25A4 291 broad.mit.edu hg19 4 186066178 186066178 + Missense_Mutation SNP G T PR-3036-Tumor Unknown Somatic WXS Illumina GAIIx LRP2BP 55805 broad.mit.edu hg19 4 186299319 186299319 + Missense_Mutation SNP A G PR-2762-Tumor Unknown Somatic WXS Illumina GAIIx CCDC110 256309 broad.mit.edu hg19 4 186392098 186392098 + Splice_Site SNP C G TCGA-XA-A8JR-01 Unknown Somatic WXS Illumina GAIIx TLR3 7098 broad.mit.edu hg19 4 187003865 187003865 + Missense_Mutation SNP C T P08-1541 Unknown Somatic WGS Illumina GAIIx KLKB1 3818 broad.mit.edu hg19 4 187159437 187159437 + Missense_Mutation SNP C T PR-3051-Tumor Unknown Somatic WXS Illumina GAIIx F11 2160 broad.mit.edu hg19 4 187206813 187206813 + Missense_Mutation SNP G A PR-01-2492-Tumor Unknown Somatic WXS Illumina GAIIx FAT1 2195 broad.mit.edu hg19 4 187518897 187518897 + Missense_Mutation SNP T G P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx FAT1 2195 broad.mit.edu hg19 4 187525022 187525022 + Missense_Mutation SNP G T P04-47-Tumor Unknown Somatic WXS Illumina GAIIx FAT1 2195 CPCGene hg19 4 187584728 187584728 + Missense_Mutation SNP G C CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAT1 2195 broad.mit.edu hg19 4 187627855 187627855 + Missense_Mutation SNP C T TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx FAT1 2195 CPCGene hg19 4 187630482 187630482 + Missense_Mutation SNP C T CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAT1 2195 broad.mit.edu hg19 4 187630619 187630619 + Missense_Mutation SNP T C P03-1426 Unknown Somatic WGS Illumina GAIIx ZFP42 132625 broad.mit.edu hg19 4 188924707 188924707 + Missense_Mutation SNP T G TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx TRIML2 205860 broad.mit.edu hg19 4 189012680 189012680 + Missense_Mutation SNP G A TCGA-EJ-5531-01 Unknown Somatic WXS Illumina GAIIx TRIML2 205860 EMBL hg19 4 189020213 189020213 + Missense_Mutation SNP C T EOPC-02 Unknown Somatic WGS Illumina HiSeq2000 TRIML1 339976 broad.mit.edu hg19 4 189060921 189060921 + Missense_Mutation SNP G A TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx TRIML1 339976 broad.mit.edu hg19 4 189061023 189061023 + Missense_Mutation SNP C T TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx PLEKHG4B 153478 broad.mit.edu hg19 5 163530 163530 + Missense_Mutation SNP A C TCGA-HC-7736-01 Unknown Somatic WXS Illumina GAIIx SDHA 6389 broad.mit.edu hg19 5 235364 235364 + Missense_Mutation SNP C T P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx AHRR 57491 broad.mit.edu hg19 5 427996 427996 + Missense_Mutation SNP G A TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx SLC9A3 6550 broad.mit.edu hg19 5 482257 482257 + Missense_Mutation SNP G T TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx SLC9A3 6550 broad.mit.edu hg19 5 492051 492051 + Missense_Mutation SNP A G P05-620 Unknown Somatic WGS Illumina GAIIx BRD9 65980 broad.mit.edu hg19 5 889242 889242 + Missense_Mutation SNP T C P04-2641-Tumor Unknown Somatic WXS Illumina GAIIx BRD9 65980 broad.mit.edu hg19 5 889273 889273 + Missense_Mutation SNP G A TCGA-G9-6365-01 Unknown Somatic WGS Illumina GAIIx SLC12A7 10723 broad.mit.edu hg19 5 1064287 1064287 + Missense_Mutation SNP G A P05-3859-Tumor Unknown Somatic WXS Illumina GAIIx SLC6A19 340024 broad.mit.edu hg19 5 1208877 1208877 + Missense_Mutation SNP G A P07-684-Tumor Unknown Somatic WXS Illumina GAIIx SLC6A3 6531 CPCGene hg19 5 1420775 1420775 + Missense_Mutation SNP G T CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 IRX4 50805 broad.mit.edu hg19 5 1879902 1879902 + Missense_Mutation SNP C T PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx ADAMTS16 170690 broad.mit.edu hg19 5 5190127 5190127 + Missense_Mutation SNP G A TCGA-HC-7748-01 Unknown Somatic WXS Illumina GAIIx ICE1 23379 CPCGene hg19 5 5448001 5448001 + Missense_Mutation SNP A T CPCG0205-F1 Unknown Somatic WXS Illumina HiSeq 2500 PAPD7 11044 broad.mit.edu hg19 5 6738818 6738818 + Missense_Mutation SNP G A TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx ADCY2 108 broad.mit.edu hg19 5 7706901 7706901 + Missense_Mutation SNP G A PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx MTRR 4552 broad.mit.edu hg19 5 7885950 7885950 + Missense_Mutation SNP C T P08-5852 Unknown Somatic WGS Illumina GAIIx SEMA5A 9037 broad.mit.edu hg19 5 9066709 9066709 + Missense_Mutation SNP G A TCGA-HC-7736-01 Unknown Somatic WXS Illumina GAIIx SEMA5A 9037 broad.mit.edu hg19 5 9108378 9108378 + Missense_Mutation SNP T C PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx SEMA5A 9037 broad.mit.edu hg19 5 9154604 9154604 + Missense_Mutation SNP G A PR-08-556 Unknown Somatic WGS Illumina GAIIx DNAH5 1767 broad.mit.edu hg19 5 13700941 13700941 + Missense_Mutation SNP T C TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx TRIO 7204 broad.mit.edu hg19 5 14287061 14287061 + Missense_Mutation SNP G C P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx ANKH 56172 broad.mit.edu hg19 5 14711313 14711313 + Missense_Mutation SNP T C TCGA-EJ-5501-01 Unknown Somatic WXS Illumina GAIIx CDH18 1016 CPCGene hg19 5 19838991 19838991 + Missense_Mutation SNP T C CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRDM9 56979 broad.mit.edu hg19 5 23518026 23518026 + Missense_Mutation SNP G A P05-620 Unknown Somatic WGS Illumina GAIIx PRDM9 56979 broad.mit.edu hg19 5 23522850 23522850 + Missense_Mutation SNP G T PR-07-4610 Unknown Somatic WGS Illumina GAIIx PRDM9 56979 broad.mit.edu hg19 5 23526359 23526359 + Missense_Mutation SNP C T TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx PRDM9 56979 CPCGene hg19 5 23527470 23527470 + Missense_Mutation SNP G A CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 CDH10 1008 broad.mit.edu hg19 5 24487862 24487862 + Missense_Mutation SNP G C P07-5318 Unknown Somatic WGS Illumina GAIIx CDH10 1008 broad.mit.edu hg19 5 24509761 24509761 + Missense_Mutation SNP C G TCGA-J4-A83L-01 Unknown Somatic WXS Illumina GAIIx CDH9 1007 CPCGene hg19 5 26881565 26881565 + Missense_Mutation SNP C G CPCG0123-F1 Unknown Somatic WXS Illumina HiSeq 2500 CDH9 1007 CPCGene hg19 5 26906205 26906205 + Missense_Mutation SNP C T CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 CDH6 1004 broad.mit.edu hg19 5 31267749 31267749 + Missense_Mutation SNP T A PR-09-3566-Tumor Unknown Somatic WXS Illumina GAIIx CDH6 1004 CPCGene hg19 5 31297423 31297423 + Missense_Mutation SNP C T CPCG0263-F1 Unknown Somatic WXS Illumina HiSeq 2500 CDH6 1004 broad.mit.edu hg19 5 31317551 31317551 + Missense_Mutation SNP G A TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx MTMR12 54545 CPCGene hg19 5 32270953 32270953 + Missense_Mutation SNP C G CPCG0003-F1 Unknown Somatic WXS Illumina HiSeq 2500 NPR3 4883 broad.mit.edu hg19 5 32774858 32774858 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx ADAMTS12 81792 broad.mit.edu hg19 5 33535013 33535013 + Missense_Mutation SNP G T TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx ADAMTS12 81792 broad.mit.edu hg19 5 33535046 33535046 + Missense_Mutation SNP G A P04-1421-Tumor Unknown Somatic WXS Illumina GAIIx ADAMTS12 81792 broad.mit.edu hg19 5 33576475 33576475 + Missense_Mutation SNP C A TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx ADAMTS12 81792 broad.mit.edu hg19 5 33658389 33658389 + Missense_Mutation SNP A T TCGA-J4-A83M-01 Unknown Somatic WXS Illumina GAIIx AMACR 23600 CPCGene hg19 5 34005955 34005955 + Missense_Mutation SNP A G CPCG0413-F1 Unknown Somatic WXS Illumina HiSeq 2500 RAI14 26064 broad.mit.edu hg19 5 34824457 34824457 + Missense_Mutation SNP A C TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx RAI14 26064 broad.mit.edu hg19 5 34826505 34826505 + Missense_Mutation SNP C G TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx TTC23L 153657 broad.mit.edu hg19 5 34863137 34863137 + Missense_Mutation SNP G A PR-3035-Tumor Unknown Somatic WXS Illumina GAIIx DNAJC21 134218 broad.mit.edu hg19 5 34954743 34954743 + Missense_Mutation SNP C G TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx SPEF2 79925 CPCGene hg19 5 35697798 35697798 + Missense_Mutation SNP A T CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 UGT3A1 133688 CPCGene hg19 5 35954498 35954498 + Missense_Mutation SNP C T CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 RANBP3L 202151 broad.mit.edu hg19 5 36271355 36271355 + Missense_Mutation SNP C A PR-08-4154 Unknown Somatic WGS Illumina GAIIx NIPBL 25836 broad.mit.edu hg19 5 37017250 37017250 + Missense_Mutation SNP C G TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx WDR70 55100 broad.mit.edu hg19 5 37725056 37725056 + Missense_Mutation SNP C T TCGA-ZG-A8QX-01 Unknown Somatic WXS Illumina GAIIx EGFLAM 133584 broad.mit.edu hg19 5 38431360 38431360 + Missense_Mutation SNP T A TCGA-HC-A6AS-01 Unknown Somatic WXS Illumina GAIIx LIFR 3977 broad.mit.edu hg19 5 38493716 38493716 + Missense_Mutation SNP A C TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx RICTOR 253260 broad.mit.edu hg19 5 38945049 38945049 + Missense_Mutation SNP T G TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx C9 735 broad.mit.edu hg19 5 39311238 39311238 + Splice_Site SNP C T TCGA-G9-6342-01 Unknown Somatic WXS Illumina GAIIx CARD6 84674 broad.mit.edu hg19 5 40854090 40854090 + Missense_Mutation SNP A G TCGA-QU-A6IP-01 Unknown Somatic WXS Illumina GAIIx C7 730 CPCGene hg19 5 40950097 40950097 + Missense_Mutation SNP C T CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 C7 730 broad.mit.edu hg19 5 40981534 40981534 + Missense_Mutation SNP C T P07-5037 Unknown Somatic WGS Illumina GAIIx MROH2B 133558 broad.mit.edu hg19 5 41000366 41000366 + Missense_Mutation SNP G A P07-4941 Unknown Somatic WGS Illumina GAIIx MROH2B 133558 broad.mit.edu hg19 5 41000383 41000383 + Missense_Mutation SNP C T P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx MROH2B 133558 broad.mit.edu hg19 5 41048475 41048475 + Missense_Mutation SNP C A TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx C6 729 broad.mit.edu hg19 5 41154017 41154017 + Missense_Mutation SNP C T TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx C6 729 broad.mit.edu hg19 5 41159224 41159224 + Missense_Mutation SNP G A TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx C5 727 broad.mit.edu hg19 5 41917370 41917370 + Missense_Mutation SNP T G PR-04-639-Tumor Unknown Somatic WXS Illumina GAIIx NNT 23530 broad.mit.edu hg19 5 43700278 43700278 + Missense_Mutation SNP T G TCGA-HC-7745-01 Unknown Somatic WXS Illumina GAIIx HCN1 348980 broad.mit.edu hg19 5 45262494 45262494 + Missense_Mutation SNP C T TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx HCN1 348980 broad.mit.edu hg19 5 45645595 45645595 + Missense_Mutation SNP C A TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx HCN1 348980 broad.mit.edu hg19 5 45645596 45645596 + Missense_Mutation SNP C T TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx HCN1 348980 broad.mit.edu hg19 5 45645692 45645692 + Missense_Mutation SNP T A PR-08-784 Unknown Somatic WGS Illumina GAIIx HCN1 348980 broad.mit.edu hg19 5 45695922 45695922 + Missense_Mutation SNP C T TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx PARP8 79668 CPCGene hg19 5 50093001 50093001 + Missense_Mutation SNP T G CPCG0241-F1 Unknown Somatic WXS Illumina HiSeq 2500 PARP8 79668 broad.mit.edu hg19 5 50123868 50123868 + Missense_Mutation SNP T C PR-3042 Unknown Somatic WGS Illumina GAIIx ITGA1 3672 broad.mit.edu hg19 5 52183780 52183780 + Missense_Mutation SNP C G PR-07-4610 Unknown Somatic WGS Illumina GAIIx ITGA1 3672 broad.mit.edu hg19 5 52194213 52194213 + Missense_Mutation SNP G A PR-06-3199 Unknown Somatic WGS Illumina GAIIx ITGA2 3673 broad.mit.edu hg19 5 52344214 52344214 + Missense_Mutation SNP C A TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx MOCS2 4338 broad.mit.edu hg19 5 52397968 52397968 + Missense_Mutation SNP A G PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx HSPB3 8988 broad.mit.edu hg19 5 53751722 53751722 + Missense_Mutation SNP T C TCGA-VP-A87J-01 Unknown Somatic WXS Illumina GAIIx GZMA 3001 broad.mit.edu hg19 5 54405924 54405924 + Missense_Mutation SNP G A TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx CDC20B 166979 broad.mit.edu hg19 5 54410070 54410070 + Missense_Mutation SNP C T TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx SKIV2L2 23517 broad.mit.edu hg19 5 54642959 54642959 + Missense_Mutation SNP A C TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx SKIV2L2 23517 CPCGene hg19 5 54674293 54674293 + Missense_Mutation SNP A G CPCG0078-F1 Unknown Somatic WXS Illumina HiSeq 2500 IL6ST 3572 CPCGene hg19 5 55247756 55247756 + Splice_Site SNP C G CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 IL6ST 3572 CPCGene hg19 5 55272106 55272106 + Missense_Mutation SNP T G CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAP3K1 4214 CPCGene hg19 5 56178277 56178277 + Missense_Mutation SNP G A CPCG0003-F1 Unknown Somatic WXS Illumina HiSeq 2500 ACTBL2 345651 broad.mit.edu hg19 5 56778328 56778328 + Missense_Mutation SNP C A TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx IPO11 51194 CPCGene hg19 5 61714952 61714952 + Missense_Mutation SNP A G CPCG0003-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAM159B 100132916 CPCGene hg19 5 63991371 63991371 + Missense_Mutation SNP G T CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAMTS6 11174 CPCGene hg19 5 64483905 64483905 + Missense_Mutation SNP C T CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 PIK3R1 5295 CPCGene hg19 5 67593331 67593331 + Missense_Mutation SNP G A CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC30A5 64924 CPCGene hg19 5 68412014 68412014 + Missense_Mutation SNP G A CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 BDP1 55814 CPCGene hg19 5 70782312 70782312 + Missense_Mutation SNP G A CPCG0265-F1 Unknown Somatic WXS Illumina HiSeq 2500 BDP1 55814 broad.mit.edu hg19 5 70806283 70806283 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx ZNF366 167465 broad.mit.edu hg19 5 71752252 71752252 + Missense_Mutation SNP G A TCGA-J4-A83M-01 Unknown Somatic WXS Illumina GAIIx TNPO1 3842 broad.mit.edu hg19 5 72195834 72195834 + Missense_Mutation SNP A G TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx TMEM171 134285 broad.mit.edu hg19 5 72427521 72427521 + Missense_Mutation SNP A G PR-STID0000003127 Unknown Somatic WGS Illumina GAIIx FOXD1 2297 CPCGene hg19 5 72743263 72743263 + Missense_Mutation SNP G A CPCG0196-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARHGEF28 64283 CPCGene hg19 5 73236768 73236768 + Missense_Mutation SNP C A CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 NSA2 10412 broad.mit.edu hg19 5 74066519 74066519 + Missense_Mutation SNP A C TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx F2RL2 2151 CPCGene hg19 5 75914430 75914430 + Missense_Mutation SNP G T CPCG0409-F1 Unknown Somatic WXS Illumina HiSeq 2500 F2RL2 2151 CPCGene hg19 5 75914431 75914431 + Missense_Mutation SNP G T CPCG0409-F1 Unknown Somatic WXS Illumina HiSeq 2500 IQGAP2 10788 broad.mit.edu hg19 5 75998395 75998395 + Missense_Mutation SNP A C PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx OTP 23440 CPCGene hg19 5 76932974 76932974 + Missense_Mutation SNP C T CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 AP3B1 8546 broad.mit.edu hg19 5 77425063 77425063 + Missense_Mutation SNP A T PR-08-4154 Unknown Somatic WGS Illumina GAIIx BHMT 635 broad.mit.edu hg19 5 78415119 78415119 + Missense_Mutation SNP A T TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx ZFYVE16 9765 broad.mit.edu hg19 5 79752812 79752812 + Missense_Mutation SNP G A TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx DHFR 1719 broad.mit.edu hg19 5 79933789 79933789 + Missense_Mutation SNP T C TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx XRCC4 7518 broad.mit.edu hg19 5 82648975 82648975 + Missense_Mutation SNP T A P07-5318 Unknown Somatic WGS Illumina GAIIx VCAN 1462 EMBL hg19 5 82786168 82786168 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 VCAN 1462 broad.mit.edu hg19 5 82817036 82817036 + Missense_Mutation SNP C A PR-04-3347-Tumor Unknown Somatic WXS Illumina GAIIx VCAN 1462 broad.mit.edu hg19 5 82832829 82832829 + Missense_Mutation SNP G T PR-09-5702-Tumor Unknown Somatic WXS Illumina GAIIx VCAN 1462 CPCGene hg19 5 82875849 82875849 + Missense_Mutation SNP A G CPCG0196-F1 Unknown Somatic WXS Illumina HiSeq 2500 HAPLN1 1404 broad.mit.edu hg19 5 82937445 82937445 + Missense_Mutation SNP C T TCGA-ZG-A8QX-01 Unknown Somatic WXS Illumina GAIIx HAPLN1 1404 broad.mit.edu hg19 5 82940276 82940276 + Missense_Mutation SNP C A TCGA-HC-7075-01 Unknown Somatic WGS Illumina GAIIx EDIL3 10085 broad.mit.edu hg19 5 83239279 83239279 + Missense_Mutation SNP T A P06-1125-Tumor Unknown Somatic WXS Illumina GAIIx MEF2C 4208 broad.mit.edu hg19 5 88018668 88018668 + Missense_Mutation SNP G T PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx MEF2C 4208 broad.mit.edu hg19 5 88027604 88027604 + Missense_Mutation SNP C T TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx MEF2C 4208 broad.mit.edu hg19 5 88056856 88056856 + Missense_Mutation SNP G A PR-3036-Tumor Unknown Somatic WXS Illumina GAIIx GPR98 0 CPCGene hg19 5 89923343 89923343 + Missense_Mutation SNP A G CPCG0246-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPR98 0 broad.mit.edu hg19 5 89939768 89939768 + Missense_Mutation SNP T C TCGA-HC-8256-01 Unknown Somatic WXS Illumina GAIIx GPR98 0 CPCGene hg19 5 89981639 89981639 + Missense_Mutation SNP C T CPCG0356-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPR98 0 CPCGene hg19 5 89992898 89992898 + Missense_Mutation SNP C A CPCG0238-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIAA0825 285600 broad.mit.edu hg19 5 93856429 93856429 + Missense_Mutation SNP C A PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx ANKRD32 0 broad.mit.edu hg19 5 94022425 94022425 + Splice_Site SNP T G TCGA-HC-7745-01 Unknown Somatic WXS Illumina GAIIx FAM81B 153643 CPCGene hg19 5 94782293 94782293 + Missense_Mutation SNP C T CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPR150 285601 broad.mit.edu hg19 5 94956112 94956112 + Missense_Mutation SNP C G TCGA-HC-7750-01 Unknown Somatic WXS Illumina GAIIx PCSK1 5122 broad.mit.edu hg19 5 95734662 95734662 + Missense_Mutation SNP G A PR-09-2744-Tumor Unknown Somatic WXS Illumina GAIIx CHD1 1105 broad.mit.edu hg19 5 98192289 98192289 + Missense_Mutation SNP T C P08-716 Unknown Somatic WGS Illumina GAIIx CHD1 1105 broad.mit.edu hg19 5 98192340 98192340 + Missense_Mutation SNP C G TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx CHD1 1105 broad.mit.edu hg19 5 98228365 98228365 + Missense_Mutation SNP C T P08-501 Unknown Somatic WGS Illumina GAIIx ST8SIA4 7903 broad.mit.edu hg19 5 100222197 100222197 + Missense_Mutation SNP A G TCGA-J4-8200-01 Unknown Somatic WXS Illumina GAIIx ST8SIA4 7903 broad.mit.edu hg19 5 100231395 100231395 + Missense_Mutation SNP C G TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx SLCO4C1 353189 broad.mit.edu hg19 5 101572711 101572711 + Missense_Mutation SNP T C PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx SLCO6A1 133482 broad.mit.edu hg19 5 101795412 101795412 + Missense_Mutation SNP G A TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx SLCO6A1 133482 broad.mit.edu hg19 5 101813486 101813486 + Missense_Mutation SNP G A TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx FBXL17 64839 broad.mit.edu hg19 5 107216868 107216868 + Missense_Mutation SNP A G TCGA-G9-6351-01 Unknown Somatic WXS Illumina GAIIx MAN2A1 4124 CPCGene hg19 5 109120538 109120538 + Missense_Mutation SNP A C CPCG0232-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMEM232 642987 CPCGene hg19 5 109976691 109976691 + Missense_Mutation SNP A T CPCG0123-F1 Unknown Somatic WXS Illumina HiSeq 2500 TSLP 85480 broad.mit.edu hg19 5 110409256 110409256 + Missense_Mutation SNP C T PR-01-2492-Tumor Unknown Somatic WXS Illumina GAIIx CAMK4 814 broad.mit.edu hg19 5 110819729 110819729 + Missense_Mutation SNP G A TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx APC 324 CPCGene hg19 5 112128143 112128143 + Missense_Mutation SNP C T CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 APC 324 broad.mit.edu hg19 5 112173635 112173635 + Missense_Mutation SNP A T P05-620 Unknown Somatic WGS Illumina GAIIx APC 324 broad.mit.edu hg19 5 112175494 112175494 + Missense_Mutation SNP T C PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx APC 324 broad.mit.edu hg19 5 112175907 112175907 + Missense_Mutation SNP C G TCGA-EJ-7325-01 Unknown Somatic WXS Illumina GAIIx DCP2 167227 broad.mit.edu hg19 5 112343668 112343668 + Missense_Mutation SNP T C TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx MCC 4163 broad.mit.edu hg19 5 112418689 112418689 + Missense_Mutation SNP G C TCGA-EJ-5504-01 Unknown Somatic WXS Illumina GAIIx MCC 4163 broad.mit.edu hg19 5 112478967 112478967 + Missense_Mutation SNP C T P03-871-Tumor Unknown Somatic WXS Illumina GAIIx MCC 4163 broad.mit.edu hg19 5 112478967 112478967 + Missense_Mutation SNP C T TCGA-EJ-5501-01 Unknown Somatic WXS Illumina GAIIx KCNN2 3781 broad.mit.edu hg19 5 113798811 113798811 + Missense_Mutation SNP T G P05-3436-Tumor Unknown Somatic WXS Illumina GAIIx TRIM36 55521 broad.mit.edu hg19 5 114466299 114466299 + Missense_Mutation SNP C T TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx DMXL1 1657 broad.mit.edu hg19 5 118433697 118433697 + Missense_Mutation SNP T G P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx DMXL1 1657 broad.mit.edu hg19 5 118511004 118511004 + Missense_Mutation SNP C T PR-08-556 Unknown Somatic WGS Illumina GAIIx FAM170A 340069 CPCGene hg19 5 118968523 118968523 + Missense_Mutation SNP G A CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRDM6 93166 broad.mit.edu hg19 5 122491614 122491614 + Missense_Mutation SNP G A PR-3042 Unknown Somatic WGS Illumina GAIIx CEP120 153241 broad.mit.edu hg19 5 122682431 122682431 + Missense_Mutation SNP G C TCGA-FC-A8O0-01 Unknown Somatic WXS Illumina GAIIx CEP120 153241 broad.mit.edu hg19 5 122729046 122729046 + Missense_Mutation SNP C T PR-09-3566-Tumor Unknown Somatic WXS Illumina GAIIx MEGF10 84466 broad.mit.edu hg19 5 126771182 126771182 + Splice_Site SNP G C TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx FBN2 2201 CPCGene hg19 5 127685079 127685079 + Missense_Mutation SNP A C CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 FBN2 2201 broad.mit.edu hg19 5 127710364 127710364 + Missense_Mutation SNP A G TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx FBN2 2201 broad.mit.edu hg19 5 127800512 127800512 + Missense_Mutation SNP C A TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx ADAMTS19 171019 broad.mit.edu hg19 5 128957923 128957923 + Missense_Mutation SNP A C TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx ADAMTS19 171019 broad.mit.edu hg19 5 128983512 128983512 + Missense_Mutation SNP G A TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx KIAA1024L 100127206 broad.mit.edu hg19 5 129096186 129096186 + Missense_Mutation SNP A T PR-04-1243 Unknown Somatic WGS Illumina GAIIx RAPGEF6 51735 broad.mit.edu hg19 5 130766663 130766663 + Missense_Mutation SNP G A TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx LOC728637 0 CPCGene hg19 5 131247554 131247554 + Missense_Mutation SNP A G CPCG0360-F1 Unknown Somatic WXS Illumina HiSeq 2500 P4HA2 8974 broad.mit.edu hg19 5 131531126 131531126 + Missense_Mutation SNP C A TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx P4HA2 8974 broad.mit.edu hg19 5 131546166 131546166 + Missense_Mutation SNP G A PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx SLC22A4 6583 broad.mit.edu hg19 5 131630515 131630515 + Missense_Mutation SNP T A TCGA-EJ-7783-01 Unknown Somatic WXS Illumina GAIIx GDF9 2661 broad.mit.edu hg19 5 132199998 132199998 + Missense_Mutation SNP T A P08-1042 Unknown Somatic WGS Illumina GAIIx HSPA4 3308 broad.mit.edu hg19 5 132426987 132426987 + Missense_Mutation SNP G A TCGA-EJ-7315-01 Unknown Somatic WXS Illumina GAIIx CDKL3 51265 broad.mit.edu hg19 5 133634385 133634385 + Missense_Mutation SNP C T TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx SEC24A 10802 broad.mit.edu hg19 5 133997171 133997171 + Missense_Mutation SNP C G PR-09-5630-Tumor Unknown Somatic WXS Illumina GAIIx SEC24A 10802 broad.mit.edu hg19 5 134010895 134010895 + Missense_Mutation SNP A G PR-02-2072-Tumor Unknown Somatic WXS Illumina GAIIx DDX46 9879 broad.mit.edu hg19 5 134152276 134152276 + Missense_Mutation SNP T C TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx NEUROG1 4762 broad.mit.edu hg19 5 134870749 134870749 + Missense_Mutation SNP C T TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx SLC25A48 153328 CPCGene hg19 5 135188263 135188263 + Missense_Mutation SNP C T CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 TGFBI 7045 broad.mit.edu hg19 5 135392372 135392372 + Missense_Mutation SNP C A TCGA-EJ-7786-01 Unknown Somatic WXS Illumina GAIIx TRPC7 57113 broad.mit.edu hg19 5 135602118 135602118 + Missense_Mutation SNP G A PR-02-254-Tumor Unknown Somatic WXS Illumina GAIIx TRPC7 57113 broad.mit.edu hg19 5 135692820 135692820 + Missense_Mutation SNP C T PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx SPOCK1 6695 CPCGene hg19 5 136602716 136602716 + Missense_Mutation SNP T C CPCG0199-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIF20A 10112 broad.mit.edu hg19 5 137520549 137520549 + Missense_Mutation SNP G A TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx CDC23 8697 CPCGene hg19 5 137524811 137524811 + Missense_Mutation SNP G A CPCG0259-F1 Unknown Somatic WXS Illumina HiSeq 2500 ETF1 2107 CPCGene hg19 5 137877239 137877239 + Missense_Mutation SNP C A CPCG0387-F1 Unknown Somatic WXS Illumina HiSeq 2500 SPATA24 202051 CPCGene hg19 5 138739742 138739742 + Missense_Mutation SNP G C CPCG0342-F1 Unknown Somatic WXS Illumina HiSeq 2500 CXXC5 51523 broad.mit.edu hg19 5 139060727 139060727 + Missense_Mutation SNP G T TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx PSD2 84249 broad.mit.edu hg19 5 139193322 139193322 + Missense_Mutation SNP A C TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx PSD2 84249 broad.mit.edu hg19 5 139219618 139219618 + Missense_Mutation SNP C T P07-684-Tumor Unknown Somatic WXS Illumina GAIIx SLC4A9 83697 CPCGene hg19 5 139744050 139744050 + Missense_Mutation SNP C T CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 EIF4EBP3 8637 CPCGene hg19 5 139927365 139927365 + Missense_Mutation SNP C T CPCG0232-F1 Unknown Somatic WXS Illumina HiSeq 2500 HARS 3035 broad.mit.edu hg19 5 140054642 140054642 + Missense_Mutation SNP C G PR-08-556 Unknown Somatic WGS Illumina GAIIx PCDHA1 56147 broad.mit.edu hg19 5 140166008 140166008 + Missense_Mutation SNP G A TCGA-G9-6351-01 Unknown Somatic WXS Illumina GAIIx PCDHA1 56147 CPCGene hg19 5 140166325 140166325 + Missense_Mutation SNP G A CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHA2 56146 CPCGene hg19 5 140176041 140176041 + Missense_Mutation SNP C T CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHA3 56145 CPCGene hg19 5 140180950 140180950 + Missense_Mutation SNP G C CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHA3 56145 CPCGene hg19 5 140182652 140182652 + Missense_Mutation SNP G T CPCG0095-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHA4 56144 broad.mit.edu hg19 5 140188744 140188744 + Missense_Mutation SNP G A PR-08-556 Unknown Somatic WGS Illumina GAIIx PCDHA5 56143 CPCGene hg19 5 140201549 140201549 + Missense_Mutation SNP C A CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHA5 56143 CPCGene hg19 5 140202687 140202687 + Missense_Mutation SNP G A CPCG0246-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHA5 56143 CPCGene hg19 5 140202971 140202971 + Missense_Mutation SNP C T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHA6 56142 broad.mit.edu hg19 5 140209661 140209661 + Missense_Mutation SNP C T TCGA-G9-6384-01 Unknown Somatic WXS Illumina GAIIx PCDHA7 56141 CPCGene hg19 5 140214199 140214199 + Missense_Mutation SNP A G CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHA8 56140 CPCGene hg19 5 140221260 140221260 + Missense_Mutation SNP T A CPCG0269-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHA8 56140 broad.mit.edu hg19 5 140222691 140222691 + Missense_Mutation SNP C T P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx PCDHA9 9752 CPCGene hg19 5 140229573 140229573 + Missense_Mutation SNP G A CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHA9 9752 broad.mit.edu hg19 5 140229692 140229692 + Missense_Mutation SNP C T TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx PCDHA10 56139 broad.mit.edu hg19 5 140237684 140237684 + Missense_Mutation SNP G A TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx PCDHA12 56137 CPCGene hg19 5 140256424 140256424 + Missense_Mutation SNP C T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHA12 56137 broad.mit.edu hg19 5 140257094 140257094 + Missense_Mutation SNP G A P07-5318 Unknown Somatic WGS Illumina GAIIx PCDHA13 56136 broad.mit.edu hg19 5 140263477 140263477 + Missense_Mutation SNP G C PR-09-5700-Tumor Unknown Somatic WXS Illumina GAIIx PCDHA13 56136 broad.mit.edu hg19 5 140263757 140263757 + Missense_Mutation SNP G A TCGA-HC-8260-01 Unknown Somatic WXS Illumina GAIIx PCDHA13 56136 CPCGene hg19 5 140264082 140264082 + Missense_Mutation SNP C T CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHAC2 56134 CPCGene hg19 5 140347313 140347313 + Missense_Mutation SNP G C CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHB2 56133 broad.mit.edu hg19 5 140475283 140475283 + Missense_Mutation SNP G T TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx PCDHB4 56131 broad.mit.edu hg19 5 140502429 140502429 + Missense_Mutation SNP A T P08-716 Unknown Somatic WGS Illumina GAIIx PCDHB5 26167 CPCGene hg19 5 140515710 140515710 + Missense_Mutation SNP G A CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHB5 26167 broad.mit.edu hg19 5 140516602 140516602 + Missense_Mutation SNP G A P07-5036-Tumor Unknown Somatic WXS Illumina GAIIx PCDHB5 26167 broad.mit.edu hg19 5 140516811 140516811 + Missense_Mutation SNP G A TCGA-G9-6365-01 Unknown Somatic WGS Illumina GAIIx PCDHB6 56130 EMBL hg19 5 140529944 140529944 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 PCDHB7 56129 broad.mit.edu hg19 5 140553130 140553130 + Missense_Mutation SNP C T P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx PCDHB8 56128 broad.mit.edu hg19 5 140558326 140558326 + Missense_Mutation SNP T C TCGA-EJ-7794-01 Unknown Somatic WXS Illumina GAIIx PCDHB8 56128 broad.mit.edu hg19 5 140558326 140558326 + Missense_Mutation SNP T C TCGA-G9-6329-01 Unknown Somatic WXS Illumina GAIIx PCDHB8 56128 broad.mit.edu hg19 5 140558326 140558326 + Missense_Mutation SNP T C P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx PCDHB8 56128 broad.mit.edu hg19 5 140559871 140559871 + Missense_Mutation SNP C T P07-684-Tumor Unknown Somatic WXS Illumina GAIIx PCDHB16 57717 CPCGene hg19 5 140562930 140562930 + Missense_Mutation SNP G A CPCG0124-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHB16 57717 broad.mit.edu hg19 5 140563061 140563061 + Missense_Mutation SNP C T TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx PCDHB9 56127 CPCGene hg19 5 140567928 140567928 + Missense_Mutation SNP G A CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHB9 56127 broad.mit.edu hg19 5 140568255 140568255 + Missense_Mutation SNP C T P04-594-Tumor Unknown Somatic WXS Illumina GAIIx PCDHB10 56126 broad.mit.edu hg19 5 140572701 140572701 + Missense_Mutation SNP A G TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx PCDHB11 56125 broad.mit.edu hg19 5 140580736 140580736 + Missense_Mutation SNP C A PR-05-3595 Unknown Somatic WGS Illumina GAIIx PCDHB12 56124 broad.mit.edu hg19 5 140589269 140589269 + Missense_Mutation SNP G A TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx PCDHGA3 56112 CPCGene hg19 5 140725063 140725063 + Missense_Mutation SNP C G CPCG0199-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHGA3 56112 CPCGene hg19 5 140725293 140725293 + Missense_Mutation SNP C T CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHGB1 56104 broad.mit.edu hg19 5 140729950 140729950 + Missense_Mutation SNP C T TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx PCDHGB1 56104 broad.mit.edu hg19 5 140731436 140731436 + Missense_Mutation SNP G A P07-684-Tumor Unknown Somatic WXS Illumina GAIIx PCDHGA4 56111 broad.mit.edu hg19 5 140735373 140735373 + Missense_Mutation SNP C T TCGA-EJ-5522-01 Unknown Somatic WXS Illumina GAIIx PCDHGA4 56111 CPCGene hg19 5 140736405 140736405 + Missense_Mutation SNP G T CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHGB3 56102 CPCGene hg19 5 140751220 140751220 + Missense_Mutation SNP T G CPCG0263-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHGA6 56109 broad.mit.edu hg19 5 140756065 140756065 + Missense_Mutation SNP G T TCGA-ZG-A8QX-01 Unknown Somatic WXS Illumina GAIIx PCDHGA8 9708 broad.mit.edu hg19 5 140772818 140772818 + Missense_Mutation SNP G A TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx PCDHGA8 9708 CPCGene hg19 5 140774532 140774532 + Missense_Mutation SNP C T CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHGB5 56101 CPCGene hg19 5 140779899 140779899 + Missense_Mutation SNP T C CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDHGB6 56100 broad.mit.edu hg19 5 140789385 140789385 + Missense_Mutation SNP C T PR-09-5630-Tumor Unknown Somatic WXS Illumina GAIIx PCDHGA10 56106 broad.mit.edu hg19 5 140792748 140792748 + Missense_Mutation SNP C T PR-0427-Tumor Unknown Somatic WXS Illumina GAIIx PCDHGA10 56106 broad.mit.edu hg19 5 140794640 140794640 + Missense_Mutation SNP C T TCGA-EJ-5530-01 Unknown Somatic WXS Illumina GAIIx PCDHGB7 56099 broad.mit.edu hg19 5 140798265 140798265 + Missense_Mutation SNP C T TCGA-EJ-5517-01 Unknown Somatic WXS Illumina GAIIx PCDHGC5 56097 broad.mit.edu hg19 5 140870417 140870417 + Missense_Mutation SNP G A TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx ARAP3 64411 broad.mit.edu hg19 5 141051173 141051173 + Missense_Mutation SNP G A P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx PRELID2 153768 broad.mit.edu hg19 5 145198978 145198978 + Splice_Site SNP C T P07-5037 Unknown Somatic WGS Illumina GAIIx GRXCR2 643226 broad.mit.edu hg19 5 145252483 145252483 + Missense_Mutation SNP G A TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx LARS 51520 broad.mit.edu hg19 5 145493811 145493811 + Missense_Mutation SNP A C TCGA-EJ-7314-01 Unknown Somatic WXS Illumina GAIIx LARS 51520 broad.mit.edu hg19 5 145547808 145547808 + Missense_Mutation SNP T G TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx TCERG1 10915 CPCGene hg19 5 145843344 145843344 + Missense_Mutation SNP A G CPCG0183-F1 Unknown Somatic WXS Illumina HiSeq 2500 PPP2R2B 5521 broad.mit.edu hg19 5 146080619 146080619 + Missense_Mutation SNP G A TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx DPYSL3 1809 broad.mit.edu hg19 5 146773637 146773637 + Missense_Mutation SNP C A PR-05-3595 Unknown Somatic WGS Illumina GAIIx SPINK9 643394 broad.mit.edu hg19 5 147718067 147718067 + Missense_Mutation SNP A C TCGA-J4-A67S-01 Unknown Somatic WXS Illumina GAIIx FBXO38 81545 broad.mit.edu hg19 5 147796680 147796680 + Missense_Mutation SNP A C TCGA-EJ-7781-01 Unknown Somatic WXS Illumina GAIIx HTR4 3360 EMBL hg19 5 147889588 147889588 + Splice_Site SNP C G EOPC-05 Unknown Somatic WGS Illumina HiSeq2000 SH3TC2 79628 broad.mit.edu hg19 5 148407223 148407223 + Missense_Mutation SNP G A TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx PCYOX1L 78991 broad.mit.edu hg19 5 148747557 148747557 + Missense_Mutation SNP G A TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx IL17B 27190 broad.mit.edu hg19 5 148754069 148754069 + Missense_Mutation SNP G A P05-3859-Tumor Unknown Somatic WXS Illumina GAIIx PPARGC1B 133522 broad.mit.edu hg19 5 149212486 149212486 + Missense_Mutation SNP A T TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx PDE6A 5145 broad.mit.edu hg19 5 149265894 149265894 + Missense_Mutation SNP G A P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx SLC26A2 1836 broad.mit.edu hg19 5 149360521 149360521 + Missense_Mutation SNP T A TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx TIGD6 81789 broad.mit.edu hg19 5 149375021 149375021 + Missense_Mutation SNP C T P07-837 Unknown Somatic WGS Illumina GAIIx CSF1R 1436 broad.mit.edu hg19 5 149439266 149439266 + Missense_Mutation SNP C T P04-594-Tumor Unknown Somatic WXS Illumina GAIIx CSF1R 1436 broad.mit.edu hg19 5 149460527 149460527 + Missense_Mutation SNP G A TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx CDX1 1044 broad.mit.edu hg19 5 149562382 149562382 + Missense_Mutation SNP G T TCGA-EJ-7327-01 Unknown Somatic WXS Illumina GAIIx CAMK2A 815 CPCGene hg19 5 149630263 149630263 + Missense_Mutation SNP G A CPCG0342-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARSI 340075 CPCGene hg19 5 149677547 149677547 + Missense_Mutation SNP G A CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 ARSI 340075 broad.mit.edu hg19 5 149678088 149678088 + Missense_Mutation SNP C G PR-2621 Unknown Somatic WGS Illumina GAIIx TCOF1 6949 broad.mit.edu hg19 5 149755319 149755319 + Missense_Mutation SNP C T TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx SYNPO 11346 broad.mit.edu hg19 5 150028481 150028481 + Missense_Mutation SNP C T PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx SYNPO 11346 broad.mit.edu hg19 5 150029062 150029062 + Missense_Mutation SNP A C TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx DCTN4 51164 broad.mit.edu hg19 5 150090831 150090831 + Missense_Mutation SNP C A PR-08-784 Unknown Somatic WGS Illumina GAIIx FAT2 2196 broad.mit.edu hg19 5 150923039 150923039 + Missense_Mutation SNP T G PR-02-254-Tumor Unknown Somatic WXS Illumina GAIIx GLRA1 2741 broad.mit.edu hg19 5 151239422 151239422 + Missense_Mutation SNP C T TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx NMUR2 56923 broad.mit.edu hg19 5 151771927 151771927 + Missense_Mutation SNP G A PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx GRIA1 2890 CPCGene hg19 5 153054209 153054209 + Missense_Mutation SNP G A CPCG0206-F1 Unknown Somatic WXS Illumina HiSeq 2500 GRIA1 2890 broad.mit.edu hg19 5 153078545 153078545 + Missense_Mutation SNP G A TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx GRIA1 2890 broad.mit.edu hg19 5 153144022 153144022 + Missense_Mutation SNP G A TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx GRIA1 2890 broad.mit.edu hg19 5 153144140 153144140 + Missense_Mutation SNP C A TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx GRIA1 2890 broad.mit.edu hg19 5 153144159 153144159 + Missense_Mutation SNP G A TCGA-J4-A67N-01 Unknown Somatic WXS Illumina GAIIx GRIA1 2890 CPCGene hg19 5 153174265 153174265 + Missense_Mutation SNP C T CPCG0348-F1 Unknown Somatic WXS Illumina HiSeq 2500 GRIA1 2890 broad.mit.edu hg19 5 153190627 153190627 + Missense_Mutation SNP C T TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx GALNT10 55568 broad.mit.edu hg19 5 153765900 153765900 + Missense_Mutation SNP C T TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx GALNT10 55568 broad.mit.edu hg19 5 153795366 153795366 + Missense_Mutation SNP G C TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx SGCD 6444 broad.mit.edu hg19 5 156184679 156184679 + Missense_Mutation SNP C T TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx FAM71B 153745 broad.mit.edu hg19 5 156590429 156590429 + Missense_Mutation SNP C T TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx ADAM19 8728 broad.mit.edu hg19 5 156957874 156957874 + Missense_Mutation SNP G A PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx THG1L 54974 broad.mit.edu hg19 5 157161584 157161584 + Missense_Mutation SNP T G PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx EBF1 1879 broad.mit.edu hg19 5 158140081 158140081 + Missense_Mutation SNP C T P03-871-Tumor Unknown Somatic WXS Illumina GAIIx EBF1 1879 broad.mit.edu hg19 5 158250221 158250221 + Missense_Mutation SNP A G PR-01-2492-Tumor Unknown Somatic WXS Illumina GAIIx IL12B 3593 CPCGene hg19 5 158749482 158749482 + Missense_Mutation SNP C A CPCG0183-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTC1 7265 broad.mit.edu hg19 5 159476556 159476556 + Missense_Mutation SNP T C TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx ATP10B 23120 broad.mit.edu hg19 5 159992774 159992774 + Missense_Mutation SNP C G TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx ATP10B 23120 broad.mit.edu hg19 5 160033839 160033839 + Missense_Mutation SNP C A TCGA-G9-6384-01 Unknown Somatic WXS Illumina GAIIx ATP10B 23120 broad.mit.edu hg19 5 160042863 160042863 + Missense_Mutation SNP T G TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx CCNG1 900 broad.mit.edu hg19 5 162868107 162868107 + Missense_Mutation SNP T A TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx TENM2 57451 broad.mit.edu hg19 5 167489162 167489162 + Missense_Mutation SNP A G TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx TENM2 57451 CPCGene hg19 5 167642096 167642096 + Missense_Mutation SNP G A CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 TENM2 57451 broad.mit.edu hg19 5 167673770 167673770 + Missense_Mutation SNP C A TCGA-G9-7519-01 Unknown Somatic WXS Illumina GAIIx WWC1 23286 EMBL hg19 5 167857203 167857203 + Missense_Mutation SNP C G EOPC-02 Unknown Somatic WGS Illumina HiSeq2000 SLIT3 6586 broad.mit.edu hg19 5 168093471 168093471 + Missense_Mutation SNP G A PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx DOCK2 1794 CPCGene hg19 5 169267807 169267807 + Missense_Mutation SNP G A CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 DOCK2 1794 broad.mit.edu hg19 5 169483749 169483749 + Missense_Mutation SNP G A TCGA-EJ-5542-01 Unknown Somatic WXS Illumina GAIIx DOCK2 1794 broad.mit.edu hg19 5 169508849 169508849 + Missense_Mutation SNP T A TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx FOXI1 2299 broad.mit.edu hg19 5 169535492 169535492 + Missense_Mutation SNP G A TCGA-G9-6364-01 Unknown Somatic WXS Illumina GAIIx LCP2 3937 broad.mit.edu hg19 5 169697912 169697912 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx KCNIP1 30820 broad.mit.edu hg19 5 170139862 170139862 + Missense_Mutation SNP C T PR-STID0000002872 Unknown Somatic WGS Illumina GAIIx KCNIP1 30820 broad.mit.edu hg19 5 170149724 170149724 + Missense_Mutation SNP T A TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx GABRP 2568 CPCGene hg19 5 170222393 170222393 + Missense_Mutation SNP G A CPCG0414-F1 Unknown Somatic WXS Illumina HiSeq 2500 RANBP17 64901 CPCGene hg19 5 170345728 170345728 + Missense_Mutation SNP T A CPCG0183-F1 Unknown Somatic WXS Illumina HiSeq 2500 FBXW11 23291 broad.mit.edu hg19 5 171318481 171318481 + Missense_Mutation SNP T C TCGA-EJ-7123-01 Unknown Somatic WXS Illumina GAIIx CREBRF 153222 CPCGene hg19 5 172537699 172537699 + Missense_Mutation SNP A G CPCG0217-F1 Unknown Somatic WXS Illumina HiSeq 2500 CREBRF 153222 CPCGene hg19 5 172539317 172539317 + Missense_Mutation SNP G A CPCG0090-F1 Unknown Somatic WXS Illumina HiSeq 2500 MSX2 4488 broad.mit.edu hg19 5 174156326 174156326 + Missense_Mutation SNP A G PR-2761-Tumor Unknown Somatic WXS Illumina GAIIx SIMC1 375484 CPCGene hg19 5 175722267 175722267 + Splice_Site SNP T C CPCG0090-F1 Unknown Somatic WXS Illumina HiSeq 2500 NOP16 51491 broad.mit.edu hg19 5 175815433 175815433 + Splice_Site SNP C G TCGA-EJ-7792-01 Unknown Somatic WXS Illumina GAIIx CDHR2 54825 CPCGene hg19 5 176002514 176002514 + Missense_Mutation SNP C T CPCG0412-F1 Unknown Somatic WXS Illumina HiSeq 2500 FGFR4 2264 broad.mit.edu hg19 5 176524365 176524365 + Missense_Mutation SNP G A TCGA-HC-8256-01 Unknown Somatic WXS Illumina GAIIx NSD1 64324 broad.mit.edu hg19 5 176636871 176636871 + Missense_Mutation SNP G A TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx PRELID1 27166 broad.mit.edu hg19 5 176731691 176731691 + Missense_Mutation SNP G A TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx GRK6 2870 CPCGene hg19 5 176859730 176859730 + Missense_Mutation SNP C T CPCG0372-F1 Unknown Somatic WXS Illumina HiSeq 2500 N4BP3 23138 broad.mit.edu hg19 5 177548157 177548157 + Missense_Mutation SNP G A TCGA-HC-8259-01 Unknown Somatic WXS Illumina GAIIx CLK4 57396 broad.mit.edu hg19 5 178045725 178045725 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx ZNF454 285676 broad.mit.edu hg19 5 178391701 178391701 + Missense_Mutation SNP A C P07-144 Unknown Somatic WGS Illumina GAIIx GRM6 2916 broad.mit.edu hg19 5 178413888 178413888 + Missense_Mutation SNP C G PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx ADAMTS2 9509 broad.mit.edu hg19 5 178556951 178556951 + Missense_Mutation SNP G A P04-594-Tumor Unknown Somatic WXS Illumina GAIIx ADAMTS2 9509 CPCGene hg19 5 178556987 178556987 + Missense_Mutation SNP G A CPCG0355-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAMTS2 9509 broad.mit.edu hg19 5 178580612 178580612 + Missense_Mutation SNP G A PR-03-3125 Unknown Somatic WGS Illumina GAIIx HNRNPH1 3187 broad.mit.edu hg19 5 179043911 179043911 + Missense_Mutation SNP C T TCGA-FC-A8O0-01 Unknown Somatic WXS Illumina GAIIx MAML1 9794 CPCGene hg19 5 179160415 179160415 + Missense_Mutation SNP G A CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAML1 9794 CPCGene hg19 5 179160416 179160416 + Missense_Mutation SNP C A CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 C5 727 CPCGene hg19 5 179264796 179264796 + Missense_Mutation SNP C T CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 GFPT2 9945 broad.mit.edu hg19 5 179731890 179731890 + Missense_Mutation SNP T A P05-3852 Unknown Somatic WGS Illumina GAIIx GFPT2 9945 broad.mit.edu hg19 5 179745955 179745955 + Missense_Mutation SNP C T TCGA-HC-A6AS-01 Unknown Somatic WXS Illumina GAIIx FLT4 2324 broad.mit.edu hg19 5 180057599 180057599 + Missense_Mutation SNP C T TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx BTNL8 79908 CPCGene hg19 5 180377116 180377116 + Missense_Mutation SNP C T CPCG0205-F1 Unknown Somatic WXS Illumina HiSeq 2500 BTNL3 10917 CPCGene hg19 5 180430875 180430875 + Missense_Mutation SNP G T CPCG0047-F1 Unknown Somatic WXS Illumina HiSeq 2500 IRF4 3662 broad.mit.edu hg19 6 397164 397164 + Missense_Mutation SNP G A TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx EXOC2 55770 broad.mit.edu hg19 6 497413 497413 + Missense_Mutation SNP C T TCGA-G9-6363-01 Unknown Somatic WXS Illumina GAIIx EXOC2 55770 CPCGene hg19 6 564052 564052 + Missense_Mutation SNP C T CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 EXOC2 55770 broad.mit.edu hg19 6 564561 564561 + Missense_Mutation SNP C T TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx SERPINB1 1992 broad.mit.edu hg19 6 2834226 2834226 + Missense_Mutation SNP C G TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx SERPINB1 1992 CPCGene hg19 6 2836182 2836182 + Missense_Mutation SNP G A CPCG0354-F1 Unknown Somatic WXS Illumina HiSeq 2500 PXDC1 221749 broad.mit.edu hg19 6 3727859 3727859 + Missense_Mutation SNP G A P04-1084 Unknown Somatic WGS Illumina GAIIx PRPF4B 8899 broad.mit.edu hg19 6 4032776 4032776 + Missense_Mutation SNP C A P04-594-Tumor Unknown Somatic WXS Illumina GAIIx F13A1 2162 CPCGene hg19 6 6197482 6197482 + Missense_Mutation SNP T C CPCG0259-F1 Unknown Somatic WXS Illumina HiSeq 2500 F13A1 2162 broad.mit.edu hg19 6 6251086 6251086 + Missense_Mutation SNP T C PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx RREB1 6239 broad.mit.edu hg19 6 7240690 7240690 + Missense_Mutation SNP T A TCGA-XA-A8JR-01 Unknown Somatic WXS Illumina GAIIx CAGE1 285782 CPCGene hg19 6 7370287 7370287 + Missense_Mutation SNP C T CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 CAGE1 285782 broad.mit.edu hg19 6 7373784 7373784 + Missense_Mutation SNP C T TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx SLC35B3 51000 broad.mit.edu hg19 6 8428205 8428205 + Missense_Mutation SNP T C P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx SYCP2L 221711 broad.mit.edu hg19 6 10928671 10928671 + Missense_Mutation SNP C T TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx EDN1 1906 broad.mit.edu hg19 6 12292654 12292654 + Missense_Mutation SNP C T PR-01-2382-Tumor Unknown Somatic WXS Illumina GAIIx SIRT5 23408 broad.mit.edu hg19 6 13592062 13592062 + Missense_Mutation SNP C A TCGA-QU-A6IO-01 Unknown Somatic WXS Illumina GAIIx RANBP9 10048 CPCGene hg19 6 13659032 13659032 + Missense_Mutation SNP A G CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAM8A1 51439 broad.mit.edu hg19 6 17605181 17605181 + Missense_Mutation SNP A G TCGA-EJ-7785-01 Unknown Somatic WXS Illumina GAIIx KIF13A 63971 broad.mit.edu hg19 6 17837121 17837121 + Missense_Mutation SNP G C PR-04-194-Tumor Unknown Somatic WXS Illumina GAIIx MBOAT1 154141 CPCGene hg19 6 20109924 20109924 + Missense_Mutation SNP A C CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 DCDC2 51473 broad.mit.edu hg19 6 24278429 24278429 + Missense_Mutation SNP C T P05-3859-Tumor Unknown Somatic WXS Illumina GAIIx GPLD1 2822 broad.mit.edu hg19 6 24467435 24467435 + Missense_Mutation SNP T C PR-09-5702-Tumor Unknown Somatic WXS Illumina GAIIx C6 729 broad.mit.edu hg19 6 24714586 24714586 + Missense_Mutation SNP G C TCGA-EJ-7784-01 Unknown Somatic WXS Illumina GAIIx FAM65B 9750 broad.mit.edu hg19 6 24850164 24850164 + Missense_Mutation SNP T G PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx LRRC16A 0 broad.mit.edu hg19 6 25516007 25516007 + Missense_Mutation SNP C T PR-04-1243 Unknown Somatic WGS Illumina GAIIx HIST1H2AA 221613 CPCGene hg19 6 25726485 25726485 + Missense_Mutation SNP C T CPCG0263-F1 Unknown Somatic WXS Illumina HiSeq 2500 HIST1H2BA 255626 CPCGene hg19 6 25727398 25727398 + Missense_Mutation SNP C T CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC17A3 10786 broad.mit.edu hg19 6 25845699 25845699 + Missense_Mutation SNP C T PR-05-839-Tumor Unknown Somatic WXS Illumina GAIIx HIST1H3C 8352 CPCGene hg19 6 26045748 26045748 + Missense_Mutation SNP A G CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 HIST1H4C 8364 CPCGene hg19 6 26104185 26104185 + Missense_Mutation SNP C G CPCG0124-F1 Unknown Somatic WXS Illumina HiSeq 2500 HIST1H2AE 3012 CPCGene hg19 6 26217589 26217589 + Missense_Mutation SNP C T CPCG0003-F1 Unknown Somatic WXS Illumina HiSeq 2500 HIST1H4G 8369 CPCGene hg19 6 26246928 26246928 + Missense_Mutation SNP C T CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 HIST1H4H 8365 CPCGene hg19 6 26285519 26285519 + Missense_Mutation SNP G A CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 BTN2A2 10385 CPCGene hg19 6 26393038 26393038 + Missense_Mutation SNP C T CPCG0166-F1 Unknown Somatic WXS Illumina HiSeq 2500 BTN2A1 11120 broad.mit.edu hg19 6 26463520 26463520 + Missense_Mutation SNP G A PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx HIST1H2BN 8341 broad.mit.edu hg19 6 27806651 27806651 + Missense_Mutation SNP T G TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx ZNF165 7718 broad.mit.edu hg19 6 28057219 28057219 + Missense_Mutation SNP A C TCGA-EJ-8470-01 Unknown Somatic WXS Illumina GAIIx NKAPL 222698 broad.mit.edu hg19 6 28227392 28227392 + Missense_Mutation SNP C T TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx NKAPL 222698 broad.mit.edu hg19 6 28227527 28227527 + Missense_Mutation SNP G A TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx ITPR3 3710 CPCGene hg19 6 33638469 33638469 + Missense_Mutation SNP G A CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 GRM4 2914 broad.mit.edu hg19 6 34004179 34004179 + Missense_Mutation SNP G A TCGA-G9-6364-01 Unknown Somatic WXS Illumina GAIIx C6 729 broad.mit.edu hg19 6 34214493 34214493 + Missense_Mutation SNP G A P05-3436-Tumor Unknown Somatic WXS Illumina GAIIx SNRPC 6631 CPCGene hg19 6 34738133 34738133 + Missense_Mutation SNP A T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 UHRF1BP1 54887 broad.mit.edu hg19 6 34804091 34804091 + Missense_Mutation SNP G T TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx PPARD 5467 broad.mit.edu hg19 6 35389697 35389697 + Missense_Mutation SNP G A TCGA-EJ-5521-01 Unknown Somatic WXS Illumina GAIIx RPL10A 4736 broad.mit.edu hg19 6 35438057 35438057 + Missense_Mutation SNP C T TCGA-G9-7519-01 Unknown Somatic WXS Illumina GAIIx FKBP5 2289 broad.mit.edu hg19 6 35588018 35588018 + Missense_Mutation SNP G A TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx SLC26A8 116369 broad.mit.edu hg19 6 35919251 35919251 + Missense_Mutation SNP T C PR-04-3347-Tumor Unknown Somatic WXS Illumina GAIIx SLC26A8 116369 broad.mit.edu hg19 6 35927511 35927511 + Missense_Mutation SNP T C TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx SLC26A8 116369 broad.mit.edu hg19 6 35980122 35980122 + Missense_Mutation SNP G A PR-06-1749 Unknown Somatic WGS Illumina GAIIx MAPK14 1432 broad.mit.edu hg19 6 36020553 36020553 + Missense_Mutation SNP C T PR-06-1749 Unknown Somatic WGS Illumina GAIIx PNPLA1 285848 broad.mit.edu hg19 6 36270248 36270248 + Splice_Site SNP T C TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx RAB44 401258 broad.mit.edu hg19 6 36688287 36688287 + Missense_Mutation SNP G A P09-37 Unknown Somatic WGS Illumina GAIIx CPNE5 57699 CPCGene hg19 6 36746710 36746710 + Missense_Mutation SNP C T CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 C6 729 CPCGene hg19 6 36884264 36884264 + Missense_Mutation SNP C T CPCG0087-F1 Unknown Somatic WXS Illumina HiSeq 2500 C6 729 broad.mit.edu hg19 6 36891198 36891198 + Missense_Mutation SNP C A TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx PI16 221476 broad.mit.edu hg19 6 36927000 36927000 + Missense_Mutation SNP G A TCGA-EJ-5505-01 Unknown Somatic WXS Illumina GAIIx CMTR1 23070 broad.mit.edu hg19 6 37426394 37426394 + Missense_Mutation SNP C T TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx DNAH8 1769 broad.mit.edu hg19 6 38810577 38810577 + Missense_Mutation SNP A T TCGA-HC-7745-01 Unknown Somatic WXS Illumina GAIIx DNAH8 1769 broad.mit.edu hg19 6 38834386 38834386 + Missense_Mutation SNP G A PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx KCNK5 8645 broad.mit.edu hg19 6 39163706 39163706 + Missense_Mutation SNP T A TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx KIF6 221458 broad.mit.edu hg19 6 39563892 39563892 + Missense_Mutation SNP C T P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx DAAM2 23500 broad.mit.edu hg19 6 39828787 39828787 + Missense_Mutation SNP G A TCGA-EJ-5517-01 Unknown Somatic WXS Illumina GAIIx DAAM2 23500 broad.mit.edu hg19 6 39847179 39847179 + Missense_Mutation SNP G A TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx LRFN2 57497 broad.mit.edu hg19 6 40360553 40360553 + Missense_Mutation SNP G A TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx NFYA 4800 broad.mit.edu hg19 6 41060804 41060804 + Missense_Mutation SNP A C PR-06-3199 Unknown Somatic WGS Illumina GAIIx TREM1 54210 CPCGene hg19 6 41250440 41250440 + Missense_Mutation SNP C G CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 C6 729 broad.mit.edu hg19 6 42096514 42096514 + Missense_Mutation SNP C T PR-05-3595 Unknown Somatic WGS Illumina GAIIx UBR2 23304 broad.mit.edu hg19 6 42657359 42657359 + Missense_Mutation SNP T G TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx RPL7L1 285855 CPCGene hg19 6 42851219 42851219 + Missense_Mutation SNP C T CPCG0206-F1 Unknown Somatic WXS Illumina HiSeq 2500 PEX6 5190 broad.mit.edu hg19 6 42934320 42934320 + Missense_Mutation SNP A G PR-09-5700-Tumor Unknown Somatic WXS Illumina GAIIx KLC4 89953 broad.mit.edu hg19 6 43038170 43038170 + Missense_Mutation SNP C T TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx PTK7 5754 broad.mit.edu hg19 6 43097526 43097526 + Missense_Mutation SNP G C TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx CUL9 23113 EMBL hg19 6 43164538 43164538 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 CUL9 23113 CPCGene hg19 6 43189470 43189470 + Missense_Mutation SNP A G CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC22A7 10864 broad.mit.edu hg19 6 43267187 43267187 + Missense_Mutation SNP C T TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx ABCC10 89845 CPCGene hg19 6 43403610 43403610 + Missense_Mutation SNP T G CPCG0339-F1 Unknown Somatic WXS Illumina HiSeq 2500 DLK2 65989 broad.mit.edu hg19 6 43418675 43418675 + Missense_Mutation SNP G A TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx TJAP1 93643 CPCGene hg19 6 43472979 43472979 + Missense_Mutation SNP A T CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 VEGFA 7422 broad.mit.edu hg19 6 43748479 43748479 + Missense_Mutation SNP C T P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx MRPL14 64928 broad.mit.edu hg19 6 44081629 44081629 + Missense_Mutation SNP C T PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx CAPN11 11131 CPCGene hg19 6 44144608 44144608 + Missense_Mutation SNP G A CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMEM151B 441151 broad.mit.edu hg19 6 44243242 44243242 + Missense_Mutation SNP G A PR-06-1749 Unknown Somatic WGS Illumina GAIIx AARS2 57505 CPCGene hg19 6 44278778 44278778 + Missense_Mutation SNP G T CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 CDC5L 988 broad.mit.edu hg19 6 44371735 44371735 + Missense_Mutation SNP A T TCGA-EJ-7327-01 Unknown Somatic WXS Illumina GAIIx ENPP4 22875 CPCGene hg19 6 46107615 46107615 + Missense_Mutation SNP A G CPCG0217-F1 Unknown Somatic WXS Illumina HiSeq 2500 ENPP5 59084 broad.mit.edu hg19 6 46129452 46129452 + Missense_Mutation SNP G A TCGA-FC-A8O0-01 Unknown Somatic WXS Illumina GAIIx ENPP5 59084 broad.mit.edu hg19 6 46133138 46133138 + Missense_Mutation SNP G A TCGA-HC-A6AP-01 Unknown Somatic WXS Illumina GAIIx CYP39A1 51302 broad.mit.edu hg19 6 46554898 46554898 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx MEP1A 4224 CPCGene hg19 6 46800983 46800983 + Missense_Mutation SNP G A CPCG0217-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPR115 0 CPCGene hg19 6 47682008 47682008 + Missense_Mutation SNP C T CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPR115 0 CPCGene hg19 6 47682643 47682643 + Missense_Mutation SNP C A CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 OPN5 221391 broad.mit.edu hg19 6 47759681 47759681 + Missense_Mutation SNP T C PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx OPN5 221391 broad.mit.edu hg19 6 47763181 47763181 + Missense_Mutation SNP C T TCGA-G9-6365-01 Unknown Somatic WGS Illumina GAIIx PTCHD4 442213 broad.mit.edu hg19 6 47846330 47846330 + Missense_Mutation SNP G A TCGA-EJ-7314-01 Unknown Somatic WXS Illumina GAIIx PTCHD4 442213 CPCGene hg19 6 47846506 47846506 + Missense_Mutation SNP C T CPCG0336-F1 Unknown Somatic WXS Illumina HiSeq 2500 PTCHD4 442213 broad.mit.edu hg19 6 47847438 47847438 + Missense_Mutation SNP T A TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx RHAG 6005 broad.mit.edu hg19 6 49604463 49604463 + Missense_Mutation SNP T G PR-3051-Tumor Unknown Somatic WXS Illumina GAIIx CRISP2 7180 broad.mit.edu hg19 6 49676895 49676895 + Missense_Mutation SNP C T P08-1541 Unknown Somatic WGS Illumina GAIIx DEFB110 245913 broad.mit.edu hg19 6 49986788 49986788 + Missense_Mutation SNP T G TCGA-QU-A6IO-01 Unknown Somatic WXS Illumina GAIIx TFAP2B 7021 broad.mit.edu hg19 6 50791264 50791264 + Missense_Mutation SNP C A PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx PKHD1 5314 broad.mit.edu hg19 6 51613289 51613289 + Missense_Mutation SNP A G TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx IL17A 3605 CPCGene hg19 6 52052561 52052561 + Missense_Mutation SNP C T CPCG0190-F1 Unknown Somatic WXS Illumina HiSeq 2500 IL17A 3605 broad.mit.edu hg19 6 52053905 52053905 + Missense_Mutation SNP C T P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx GSTA2 2939 broad.mit.edu hg19 6 52616466 52616466 + Missense_Mutation SNP T A TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx ICK 22858 broad.mit.edu hg19 6 52897365 52897365 + Missense_Mutation SNP T G TCGA-EJ-5504-01 Unknown Somatic WXS Illumina GAIIx KLHL31 401265 broad.mit.edu hg19 6 53519878 53519878 + Missense_Mutation SNP T C PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx TINAG 27283 CPCGene hg19 6 54214599 54214599 + Missense_Mutation SNP C T CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 HCRTR2 3062 broad.mit.edu hg19 6 55128601 55128601 + Missense_Mutation SNP G A TCGA-EJ-7791-01 Unknown Somatic WGS Illumina GAIIx HCRTR2 3062 broad.mit.edu hg19 6 55147206 55147206 + Missense_Mutation SNP G A TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx DST 667 CPCGene hg19 6 56350218 56350218 + Missense_Mutation SNP G A CPCG0047-F1 Unknown Somatic WXS Illumina HiSeq 2500 DST 667 broad.mit.edu hg19 6 56373517 56373517 + Missense_Mutation SNP C T TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx DST 667 broad.mit.edu hg19 6 56417898 56417898 + Missense_Mutation SNP C T TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx DST 667 CPCGene hg19 6 56462758 56462758 + Missense_Mutation SNP T C CPCG0199-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIAA1586 57691 CPCGene hg19 6 56919142 56919142 + Missense_Mutation SNP C T CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF451 26036 broad.mit.edu hg19 6 56966464 56966464 + Missense_Mutation SNP G A P08-716 Unknown Somatic WGS Illumina GAIIx KHDRBS2 202559 CPCGene hg19 6 62604655 62604655 + Missense_Mutation SNP G A CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 KHDRBS2 202559 broad.mit.edu hg19 6 62604694 62604694 + Missense_Mutation SNP C T P03-871-Tumor Unknown Somatic WXS Illumina GAIIx PHF3 23469 broad.mit.edu hg19 6 64401683 64401683 + Missense_Mutation SNP T G P04-2740-Tumor Unknown Somatic WXS Illumina GAIIx EYS 346007 broad.mit.edu hg19 6 65596675 65596675 + Missense_Mutation SNP T C PR-08-2153 Unknown Somatic WGS Illumina GAIIx EYS 346007 CPCGene hg19 6 65622579 65622579 + Missense_Mutation SNP G A CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 BAI3 0 broad.mit.edu hg19 6 69348840 69348840 + Missense_Mutation SNP T A TCGA-HC-7736-01 Unknown Somatic WXS Illumina GAIIx BAI3 0 EMBL hg19 6 69666595 69666595 + Missense_Mutation SNP C T EOPC-07 Unknown Somatic WGS Illumina HiSeq2000 BAI3 0 CPCGene hg19 6 69666595 69666595 + Missense_Mutation SNP C T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 BAI3 0 broad.mit.edu hg19 6 70064192 70064192 + Missense_Mutation SNP C T TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx COL19A1 1310 broad.mit.edu hg19 6 70589473 70589473 + Missense_Mutation SNP G A PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx RIMS1 22999 broad.mit.edu hg19 6 73023267 73023267 + Missense_Mutation SNP A T P07-837 Unknown Somatic WGS Illumina GAIIx KCNQ5 56479 broad.mit.edu hg19 6 73332016 73332016 + Missense_Mutation SNP C T PR-04-1243 Unknown Somatic WGS Illumina GAIIx DDX43 55510 broad.mit.edu hg19 6 74111706 74111706 + Missense_Mutation SNP G C TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx COL12A1 1303 broad.mit.edu hg19 6 75860932 75860932 + Missense_Mutation SNP C T TCGA-EJ-7792-01 Unknown Somatic WXS Illumina GAIIx FILIP1 27145 broad.mit.edu hg19 6 76022647 76022647 + Missense_Mutation SNP A C TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx FILIP1 27145 broad.mit.edu hg19 6 76124576 76124576 + Missense_Mutation SNP T G TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx SENP6 26054 broad.mit.edu hg19 6 76373050 76373050 + Missense_Mutation SNP A G TCGA-QU-A6IO-01 Unknown Somatic WXS Illumina GAIIx MYO6 4646 broad.mit.edu hg19 6 76604978 76604978 + Splice_Site SNP G A TCGA-CH-5740-01 Unknown Somatic WXS Illumina GAIIx MYO6 4646 broad.mit.edu hg19 6 76624578 76624578 + Missense_Mutation SNP T A P07-4941 Unknown Somatic WGS Illumina GAIIx MEI4 101928601 CPCGene hg19 6 78471323 78471323 + Missense_Mutation SNP T A CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 ELOVL4 6785 broad.mit.edu hg19 6 80626371 80626371 + Missense_Mutation SNP A T TCGA-EJ-7315-01 Unknown Somatic WXS Illumina GAIIx TTK 7272 CPCGene hg19 6 80744743 80744743 + Missense_Mutation SNP A C CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTK 7272 CPCGene hg19 6 80746192 80746192 + Missense_Mutation SNP G T CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 IBTK 25998 CPCGene hg19 6 82904333 82904333 + Missense_Mutation SNP A T CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 UBE3D 90025 CPCGene hg19 6 83763929 83763929 + Missense_Mutation SNP C G CPCG0265-F1 Unknown Somatic WXS Illumina HiSeq 2500 PGM3 5238 broad.mit.edu hg19 6 83880077 83880077 + Missense_Mutation SNP G A P06-1125-Tumor Unknown Somatic WXS Illumina GAIIx RWDD2A 112611 broad.mit.edu hg19 6 83905528 83905528 + Missense_Mutation SNP A T TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx ME1 4199 broad.mit.edu hg19 6 84140595 84140595 + Splice_Site SNP C T TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx TBX18 9096 broad.mit.edu hg19 6 85446505 85446505 + Missense_Mutation SNP T C PR-09-3566-Tumor Unknown Somatic WXS Illumina GAIIx TBX18 9096 broad.mit.edu hg19 6 85448257 85448257 + Missense_Mutation SNP G A TCGA-CH-5746-01 Unknown Somatic WXS Illumina GAIIx NT5E 4907 broad.mit.edu hg19 6 86195049 86195049 + Missense_Mutation SNP T G TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx SNX14 57231 CPCGene hg19 6 86256893 86256893 + Missense_Mutation SNP G T CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 HTR1E 3354 broad.mit.edu hg19 6 87725488 87725488 + Missense_Mutation SNP G A TCGA-VP-A87C-01 Unknown Somatic WXS Illumina GAIIx HTR1E 3354 CPCGene hg19 6 87726030 87726030 + Missense_Mutation SNP C T CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 HTR1E 3354 broad.mit.edu hg19 6 87726074 87726074 + Missense_Mutation SNP C T TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx ZNF292 23036 CPCGene hg19 6 87969183 87969183 + Missense_Mutation SNP C T CPCG0387-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF292 23036 broad.mit.edu hg19 6 87969690 87969690 + Missense_Mutation SNP C T TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx C6 729 CPCGene hg19 6 88138389 88138389 + Missense_Mutation SNP G A CPCG0196-F1 Unknown Somatic WXS Illumina HiSeq 2500 CNR1 1268 broad.mit.edu hg19 6 88854141 88854141 + Missense_Mutation SNP C T TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx PNRC1 10957 CPCGene hg19 6 89793708 89793708 + Missense_Mutation SNP T C CPCG0366-F1 Unknown Somatic WXS Illumina HiSeq 2500 GABRR2 2570 CPCGene hg19 6 89974204 89974204 + Missense_Mutation SNP G A CPCG0078-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANKRD6 22881 broad.mit.edu hg19 6 90340367 90340367 + Missense_Mutation SNP G C TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx BACH2 60468 broad.mit.edu hg19 6 90660405 90660405 + Missense_Mutation SNP G A TCGA-J4-A83K-01 Unknown Somatic WXS Illumina GAIIx MAP3K7 6885 CPCGene hg19 6 91226345 91226345 + Missense_Mutation SNP G A CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 EPHA7 2045 broad.mit.edu hg19 6 94066494 94066494 + Missense_Mutation SNP G C TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx FUT9 10690 broad.mit.edu hg19 6 96651793 96651793 + Missense_Mutation SNP G A PR-09-2744-Tumor Unknown Somatic WXS Illumina GAIIx UFL1 23376 broad.mit.edu hg19 6 96988523 96988523 + Missense_Mutation SNP A G TCGA-EJ-7792-01 Unknown Somatic WXS Illumina GAIIx GPR63 81491 CPCGene hg19 6 97246926 97246926 + Missense_Mutation SNP G A CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 POU3F2 5454 CPCGene hg19 6 99284011 99284011 + Missense_Mutation SNP G A CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 MCHR2 84539 broad.mit.edu hg19 6 100390896 100390896 + Missense_Mutation SNP C T TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx SIM1 6492 broad.mit.edu hg19 6 100841663 100841663 + Missense_Mutation SNP C T TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx ASCC3 10973 broad.mit.edu hg19 6 101098516 101098516 + Missense_Mutation SNP T C TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx ASCC3 10973 broad.mit.edu hg19 6 101166013 101166013 + Missense_Mutation SNP C A TCGA-EJ-5522-01 Unknown Somatic WXS Illumina GAIIx ASCC3 10973 CPCGene hg19 6 101307000 101307000 + Missense_Mutation SNP A C CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRDM1 639 CPCGene hg19 6 106547233 106547233 + Missense_Mutation SNP A C CPCG0206-F1 Unknown Somatic WXS Illumina HiSeq 2500 QRSL1 55278 broad.mit.edu hg19 6 107088266 107088266 + Missense_Mutation SNP C T P09-37 Unknown Somatic WGS Illumina GAIIx SOBP 55084 broad.mit.edu hg19 6 107956648 107956648 + Missense_Mutation SNP G A PR-08-4154 Unknown Somatic WGS Illumina GAIIx PPIL6 285755 EMBL hg19 6 109740404 109740404 + Missense_Mutation SNP C A EOPC-06 Unknown Somatic WGS Illumina HiSeq2000 AK9 221264 CPCGene hg19 6 109980460 109980460 + Missense_Mutation SNP C A CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 CDC40 51362 broad.mit.edu hg19 6 110547378 110547378 + Missense_Mutation SNP C T TCGA-EJ-5521-01 Unknown Somatic WXS Illumina GAIIx METTL24 728464 CPCGene hg19 6 110567275 110567275 + Missense_Mutation SNP T A CPCG0334-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC22A16 85413 broad.mit.edu hg19 6 110768172 110768172 + Missense_Mutation SNP C A TCGA-G9-6338-01 Unknown Somatic WXS Illumina GAIIx CDK19 23097 CPCGene hg19 6 110943359 110943359 + Missense_Mutation SNP C T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 CDK19 23097 broad.mit.edu hg19 6 110948346 110948346 + Missense_Mutation SNP T C TCGA-EJ-5494-01 Unknown Somatic WXS Illumina GAIIx SLC16A10 117247 broad.mit.edu hg19 6 111498553 111498553 + Missense_Mutation SNP C T TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx REV3L 5980 broad.mit.edu hg19 6 111697941 111697941 + Missense_Mutation SNP T C PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx REV3L 5980 CPCGene hg19 6 111732701 111732701 + Missense_Mutation SNP T C CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 FYN 2534 EMBL hg19 6 112020733 112020733 + Missense_Mutation SNP C T EOPC-05 Unknown Somatic WGS Illumina HiSeq2000 LAMA4 3910 broad.mit.edu hg19 6 112441551 112441551 + Missense_Mutation SNP T G TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx LAMA4 3910 broad.mit.edu hg19 6 112480078 112480078 + Missense_Mutation SNP G A TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx LAMA4 3910 broad.mit.edu hg19 6 112486397 112486397 + Missense_Mutation SNP G A TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx HDAC2 3066 broad.mit.edu hg19 6 114264653 114264653 + Missense_Mutation SNP G A P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx NT5DC1 221294 broad.mit.edu hg19 6 116427483 116427483 + Missense_Mutation SNP A G P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx ZUFSP 221302 broad.mit.edu hg19 6 116988105 116988105 + Missense_Mutation SNP C A PR-07-4610 Unknown Somatic WGS Illumina GAIIx RFX6 222546 CPCGene hg19 6 117240323 117240323 + Missense_Mutation SNP T C CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 RFX6 222546 broad.mit.edu hg19 6 117245849 117245849 + Missense_Mutation SNP C T TCGA-G9-7522-01 Unknown Somatic WGS Illumina GAIIx MAN1A1 4121 broad.mit.edu hg19 6 119510998 119510998 + Missense_Mutation SNP G A TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx GJA1 2697 broad.mit.edu hg19 6 121768830 121768830 + Missense_Mutation SNP G A P08-716 Unknown Somatic WGS Illumina GAIIx SERINC1 57515 broad.mit.edu hg19 6 122779772 122779772 + Missense_Mutation SNP C T TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx KIAA0408 9729 broad.mit.edu hg19 6 127771292 127771292 + Missense_Mutation SNP C T PR-01-2492-Tumor Unknown Somatic WXS Illumina GAIIx SOGA3 387104 CPCGene hg19 6 127796822 127796822 + Missense_Mutation SNP C T CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 PTPRK 5796 CPCGene hg19 6 128404947 128404947 + Missense_Mutation SNP T A CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 EPB41L2 2037 broad.mit.edu hg19 6 131216167 131216167 + Missense_Mutation SNP C T TCGA-HC-7748-01 Unknown Somatic WXS Illumina GAIIx AKAP7 9465 broad.mit.edu hg19 6 131490307 131490307 + Missense_Mutation SNP A G TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx MED23 9439 CPCGene hg19 6 131913564 131913564 + Missense_Mutation SNP C G CPCG0413-F1 Unknown Somatic WXS Illumina HiSeq 2500 MED23 9439 CPCGene hg19 6 131915299 131915299 + Missense_Mutation SNP C A CPCG0413-F1 Unknown Somatic WXS Illumina HiSeq 2500 ENPP3 5169 broad.mit.edu hg19 6 131973760 131973760 + Missense_Mutation SNP G A TCGA-HC-8256-01 Unknown Somatic WXS Illumina GAIIx ENPP1 5167 broad.mit.edu hg19 6 132195457 132195457 + Missense_Mutation SNP A G TCGA-G9-6338-01 Unknown Somatic WXS Illumina GAIIx MOXD1 26002 broad.mit.edu hg19 6 132641814 132641814 + Missense_Mutation SNP A G TCGA-G9-6348-01 Unknown Somatic WXS Illumina GAIIx MOXD1 26002 CPCGene hg19 6 132694084 132694084 + Missense_Mutation SNP G T CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 TAAR6 319100 broad.mit.edu hg19 6 132891858 132891858 + Missense_Mutation SNP C T TCGA-G9-6354-01 Unknown Somatic WXS Illumina GAIIx TAAR5 9038 CPCGene hg19 6 132910503 132910503 + Missense_Mutation SNP C T CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 MYB 4602 broad.mit.edu hg19 6 135515025 135515025 + Missense_Mutation SNP A T TCGA-2A-A8VL-01 Unknown Somatic WXS Illumina GAIIx MYB 4602 broad.mit.edu hg19 6 135522859 135522859 + Missense_Mutation SNP C T P05-3852 Unknown Somatic WGS Illumina GAIIx AHI1 54806 EMBL hg19 6 135754325 135754325 + Missense_Mutation SNP C T EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 BCLAF1 9774 broad.mit.edu hg19 6 136593183 136593183 + Missense_Mutation SNP G C TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx BCLAF1 9774 broad.mit.edu hg19 6 136593183 136593183 + Missense_Mutation SNP G C TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx BCLAF1 9774 broad.mit.edu hg19 6 136596776 136596776 + Missense_Mutation SNP C G PR-2762-Tumor Unknown Somatic WXS Illumina GAIIx MAP3K5 4217 broad.mit.edu hg19 6 136913365 136913365 + Missense_Mutation SNP G T TCGA-G9-6498-01 Unknown Somatic WXS Illumina GAIIx TNFAIP3 7128 broad.mit.edu hg19 6 138197133 138197133 + Missense_Mutation SNP A G TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx ECT2L 345930 EMBL hg19 6 139206856 139206856 + Missense_Mutation SNP C T EOPC-08 Unknown Somatic WGS Illumina HiSeq2000 CITED2 10370 broad.mit.edu hg19 6 139695051 139695051 + Missense_Mutation SNP C A TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx SF3B5 83443 broad.mit.edu hg19 6 144416413 144416413 + Missense_Mutation SNP C G TCGA-J4-A67Q-01 Unknown Somatic WXS Illumina GAIIx UTRN 7402 CPCGene hg19 6 144747582 144747582 + Missense_Mutation SNP C G CPCG0259-F1 Unknown Somatic WXS Illumina HiSeq 2500 UTRN 7402 CPCGene hg19 6 144812070 144812070 + Missense_Mutation SNP A G CPCG0206-F1 Unknown Somatic WXS Illumina HiSeq 2500 UTRN 7402 broad.mit.edu hg19 6 144835864 144835864 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx UTRN 7402 broad.mit.edu hg19 6 144844318 144844318 + Missense_Mutation SNP G A TCGA-J4-A67L-01 Unknown Somatic WXS Illumina GAIIx SHPRH 257218 broad.mit.edu hg19 6 146240594 146240594 + Missense_Mutation SNP G A P07-837 Unknown Somatic WGS Illumina GAIIx SHPRH 257218 broad.mit.edu hg19 6 146243842 146243842 + Missense_Mutation SNP C G TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx SHPRH 257218 broad.mit.edu hg19 6 146266762 146266762 + Missense_Mutation SNP T C PR-3051-Tumor Unknown Somatic WXS Illumina GAIIx GRM1 2911 broad.mit.edu hg19 6 146480607 146480607 + Missense_Mutation SNP G A TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx GRM1 2911 broad.mit.edu hg19 6 146480672 146480672 + Missense_Mutation SNP C T TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx GRM1 2911 CPCGene hg19 6 146755595 146755595 + Missense_Mutation SNP G A CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADGB 79747 CPCGene hg19 6 147012386 147012386 + Missense_Mutation SNP T C CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 UST 10090 broad.mit.edu hg19 6 149262511 149262511 + Missense_Mutation SNP G A TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx TAB2 23118 broad.mit.edu hg19 6 149700269 149700269 + Missense_Mutation SNP A G TCGA-J4-A6M7-01 Unknown Somatic WXS Illumina GAIIx ZC3H12D 340152 broad.mit.edu hg19 6 149773804 149773804 + Missense_Mutation SNP G T TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx PPIL4 85313 CPCGene hg19 6 149855846 149855846 + Missense_Mutation SNP G T CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 KATNA1 11104 CPCGene hg19 6 149922795 149922795 + Missense_Mutation SNP A G CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 LATS1 9113 broad.mit.edu hg19 6 150001494 150001494 + Missense_Mutation SNP T C P08-716 Unknown Somatic WGS Illumina GAIIx PPP1R14C 81706 CPCGene hg19 6 150535899 150535899 + Missense_Mutation SNP T C CPCG0241-F1 Unknown Somatic WXS Illumina HiSeq 2500 PLEKHG1 57480 broad.mit.edu hg19 6 151055000 151055000 + Missense_Mutation SNP G A TCGA-G9-6354-01 Unknown Somatic WXS Illumina GAIIx PLEKHG1 57480 broad.mit.edu hg19 6 151139350 151139350 + Missense_Mutation SNP T G P05-3859-Tumor Unknown Somatic WXS Illumina GAIIx MTHFD1L 25902 broad.mit.edu hg19 6 151243383 151243383 + Missense_Mutation SNP C T TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx CCDC170 80129 broad.mit.edu hg19 6 151917594 151917594 + Missense_Mutation SNP C T TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx ESR1 2099 CPCGene hg19 6 152129487 152129487 + Missense_Mutation SNP C T CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 SYNE1 23345 CPCGene hg19 6 152631587 152631587 + Missense_Mutation SNP G A CPCG0374-F1 Unknown Somatic WXS Illumina HiSeq 2500 SYNE1 23345 CPCGene hg19 6 152639396 152639396 + Missense_Mutation SNP C T CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 SYNE1 23345 CPCGene hg19 6 152642484 152642484 + Missense_Mutation SNP T G CPCG0263-F1 Unknown Somatic WXS Illumina HiSeq 2500 SYNE1 23345 broad.mit.edu hg19 6 152647580 152647580 + Missense_Mutation SNP G A TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx SYNE1 23345 broad.mit.edu hg19 6 152652957 152652957 + Missense_Mutation SNP C T TCGA-2A-A8VV-01 Unknown Somatic WXS Illumina GAIIx SYNE1 23345 EMBL hg19 6 152679519 152679519 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 SYNE1 23345 broad.mit.edu hg19 6 152763248 152763248 + Missense_Mutation SNP G T PR-09-2517-Tumor Unknown Somatic WXS Illumina GAIIx SYNE1 23345 broad.mit.edu hg19 6 152776617 152776617 + Missense_Mutation SNP C A TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx SYNE1 23345 broad.mit.edu hg19 6 152804261 152804261 + Missense_Mutation SNP C T TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx VIP 7432 CPCGene hg19 6 153073337 153073337 + Missense_Mutation SNP C A CPCG0154-F1 Unknown Somatic WXS Illumina HiSeq 2500 RGS17 26575 CPCGene hg19 6 153332792 153332792 + Missense_Mutation SNP T A CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 TIAM2 26230 broad.mit.edu hg19 6 155572137 155572137 + Missense_Mutation SNP C A TCGA-J4-A67K-01 Unknown Somatic WXS Illumina GAIIx TFB1M 51106 broad.mit.edu hg19 6 155632395 155632395 + Missense_Mutation SNP C G TCGA-EJ-7325-01 Unknown Somatic WXS Illumina GAIIx ARID1B 57492 broad.mit.edu hg19 6 157454170 157454170 + Missense_Mutation SNP G A TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx ARID1B 57492 CPCGene hg19 6 157521944 157521944 + Missense_Mutation SNP C A CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 TAGAP 117289 broad.mit.edu hg19 6 159457401 159457401 + Missense_Mutation SNP G A PR-08-556 Unknown Somatic WGS Illumina GAIIx FNDC1 84624 CPCGene hg19 6 159653234 159653234 + Missense_Mutation SNP C T CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 FNDC1 84624 broad.mit.edu hg19 6 159654069 159654069 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx FNDC1 84624 broad.mit.edu hg19 6 159654614 159654614 + Missense_Mutation SNP G A PR-02-1736-Tumor Unknown Somatic WXS Illumina GAIIx FNDC1 84624 broad.mit.edu hg19 6 159654630 159654630 + Missense_Mutation SNP C T TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx FNDC1 84624 broad.mit.edu hg19 6 159687239 159687239 + Missense_Mutation SNP C A P07-684-Tumor Unknown Somatic WXS Illumina GAIIx WTAP 9589 broad.mit.edu hg19 6 160174515 160174515 + Missense_Mutation SNP C A P07-144 Unknown Somatic WGS Illumina GAIIx WTAP 9589 CPCGene hg19 6 160176084 160176084 + Missense_Mutation SNP T G CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 PNLDC1 154197 CPCGene hg19 6 160221848 160221848 + Missense_Mutation SNP C T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 QKI 9444 broad.mit.edu hg19 6 163983069 163983069 + Missense_Mutation SNP A G TCGA-G9-6494-01 Unknown Somatic WXS Illumina GAIIx QKI 9444 broad.mit.edu hg19 6 163987802 163987802 + Missense_Mutation SNP C A P04-594-Tumor Unknown Somatic WXS Illumina GAIIx C6 729 broad.mit.edu hg19 6 165715296 165715296 + Missense_Mutation SNP C A TCGA-J4-A83N-01 Unknown Somatic WXS Illumina GAIIx T 6862 CPCGene hg19 6 166578123 166578123 + Missense_Mutation SNP C T CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 RPS6KA2 6196 broad.mit.edu hg19 6 166836821 166836821 + Missense_Mutation SNP C T P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx CCR6 1235 broad.mit.edu hg19 6 167550766 167550766 + Missense_Mutation SNP G A TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx TTLL2 83887 CPCGene hg19 6 167753664 167753664 + Missense_Mutation SNP C T CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTLL2 83887 CPCGene hg19 6 167753665 167753665 + Missense_Mutation SNP G T CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 MLLT4 0 broad.mit.edu hg19 6 168343846 168343846 + Missense_Mutation SNP C T PR-05-3595 Unknown Somatic WGS Illumina GAIIx HGC6 0 EMBL hg19 6 168377029 168377029 + Missense_Mutation SNP G A EOPC-09 Unknown Somatic WGS Illumina HiSeq2000 THBS2 7058 broad.mit.edu hg19 6 169622428 169622428 + Missense_Mutation SNP G A P07-5318 Unknown Somatic WGS Illumina GAIIx THBS2 7058 CPCGene hg19 6 169637357 169637357 + Missense_Mutation SNP C T CPCG0183-F1 Unknown Somatic WXS Illumina HiSeq 2500 PHF10 55274 broad.mit.edu hg19 6 170114901 170114901 + Missense_Mutation SNP G A PR-05-839-Tumor Unknown Somatic WXS Illumina GAIIx FAM120B 84498 broad.mit.edu hg19 6 170667405 170667405 + Missense_Mutation SNP A T TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx TBP 6908 CPCGene hg19 6 170871013 170871013 + Missense_Mutation SNP A G CPCG0391-F1 Unknown Somatic WXS Illumina HiSeq 2500 TBP 6908 CPCGene hg19 6 170871040 170871040 + Missense_Mutation SNP A G CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAP1 11033 broad.mit.edu hg19 7 939748 939748 + Missense_Mutation SNP C G TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx MICALL2 79778 broad.mit.edu hg19 7 1477839 1477839 + Missense_Mutation SNP G A TCGA-XA-A8JR-01 Unknown Somatic WXS Illumina GAIIx MICALL2 79778 CPCGene hg19 7 1484659 1484659 + Missense_Mutation SNP C T CPCG0366-F1 Unknown Somatic WXS Illumina HiSeq 2500 LFNG 3955 CPCGene hg19 7 2565083 2565083 + Missense_Mutation SNP A G CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 TTYH3 80727 CPCGene hg19 7 2689217 2689217 + Missense_Mutation SNP G T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 CARD11 84433 CPCGene hg19 7 2959105 2959105 + Missense_Mutation SNP C G CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 CARD11 84433 broad.mit.edu hg19 7 2959232 2959232 + Missense_Mutation SNP C G PR-06-3199 Unknown Somatic WGS Illumina GAIIx CARD11 84433 broad.mit.edu hg19 7 2984130 2984130 + Missense_Mutation SNP C T TCGA-EJ-7327-01 Unknown Somatic WXS Illumina GAIIx SDK1 221935 CPCGene hg19 7 3658774 3658774 + Missense_Mutation SNP C T CPCG0356-F1 Unknown Somatic WXS Illumina HiSeq 2500 SDK1 221935 broad.mit.edu hg19 7 3990593 3990593 + Missense_Mutation SNP G T TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx SDK1 221935 broad.mit.edu hg19 7 3990604 3990604 + Missense_Mutation SNP G A TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx RADIL 55698 CPCGene hg19 7 4856979 4856979 + Missense_Mutation SNP G A CPCG0233-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC29A4 222962 broad.mit.edu hg19 7 5342536 5342536 + Missense_Mutation SNP C T TCGA-CH-5790-01 Unknown Somatic WXS Illumina GAIIx TNRC18 84629 CPCGene hg19 7 5401266 5401266 + Missense_Mutation SNP C T CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 FBXL18 80028 CPCGene hg19 7 5521468 5521468 + Missense_Mutation SNP G A CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 ACTB 60 broad.mit.edu hg19 7 5568828 5568828 + Missense_Mutation SNP G A TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx RNF216 54476 broad.mit.edu hg19 7 5780784 5780784 + Missense_Mutation SNP A C TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx PMS2 5395 broad.mit.edu hg19 7 6027226 6027226 + Missense_Mutation SNP C T PR-03-3125 Unknown Somatic WGS Illumina GAIIx ZNF316 100131017 broad.mit.edu hg19 7 6682112 6682112 + Missense_Mutation SNP C T PR-STID0000003127 Unknown Somatic WGS Illumina GAIIx ZNF12 7559 CPCGene hg19 7 6730896 6730896 + Missense_Mutation SNP A C CPCG0001-F1 Unknown Somatic WXS Illumina HiSeq 2500 PHF14 9678 broad.mit.edu hg19 7 11076181 11076181 + Missense_Mutation SNP T C PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx THSD7A 221981 broad.mit.edu hg19 7 11676141 11676141 + Missense_Mutation SNP C T TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx VWDE 221806 CPCGene hg19 7 12409273 12409273 + Missense_Mutation SNP C T CPCG0348-F1 Unknown Somatic WXS Illumina HiSeq 2500 DGKB 1607 CPCGene hg19 7 14613993 14613993 + Missense_Mutation SNP G A CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 AGMO 392636 broad.mit.edu hg19 7 15430468 15430468 + Missense_Mutation SNP A G TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx AGMO 392636 broad.mit.edu hg19 7 15458194 15458194 + Missense_Mutation SNP T C TCGA-EJ-5521-01 Unknown Somatic WXS Illumina GAIIx AGR2 10551 CPCGene hg19 7 16834593 16834593 + Missense_Mutation SNP G A CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 PRPS1L1 221823 broad.mit.edu hg19 7 18066678 18066678 + Missense_Mutation SNP C A PR-04-1243 Unknown Somatic WGS Illumina GAIIx PRPS1L1 221823 broad.mit.edu hg19 7 18067340 18067340 + Missense_Mutation SNP G A PR-04-1243 Unknown Somatic WGS Illumina GAIIx HDAC9 9734 broad.mit.edu hg19 7 18687446 18687446 + Missense_Mutation SNP G A TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx ABCB5 340273 broad.mit.edu hg19 7 20778650 20778650 + Missense_Mutation SNP C T TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx GPNMB 10457 broad.mit.edu hg19 7 23300355 23300355 + Missense_Mutation SNP A G TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx IGF2BP3 10643 broad.mit.edu hg19 7 23358826 23358826 + Missense_Mutation SNP G A PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx TRA2A 29896 broad.mit.edu hg19 7 23556149 23556149 + Splice_Site SNP T A TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx DFNA5 1687 broad.mit.edu hg19 7 24789260 24789260 + Missense_Mutation SNP C A PR-3035-Tumor Unknown Somatic WXS Illumina GAIIx OSBPL3 26031 CPCGene hg19 7 24870401 24870401 + Missense_Mutation SNP A T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 NPVF 64111 broad.mit.edu hg19 7 25264785 25264785 + Missense_Mutation SNP G A TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx CBX3 11335 broad.mit.edu hg19 7 26248069 26248069 + Missense_Mutation SNP C T P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx HOXA4 3201 broad.mit.edu hg19 7 27169038 27169038 + Missense_Mutation SNP G A PR-08-556 Unknown Somatic WGS Illumina GAIIx HOXA7 3204 broad.mit.edu hg19 7 27196107 27196107 + Missense_Mutation SNP G C PR-05-3595 Unknown Somatic WGS Illumina GAIIx HIBADH 11112 broad.mit.edu hg19 7 27565971 27565971 + Missense_Mutation SNP G A TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx HIBADH 11112 CPCGene hg19 7 27689114 27689114 + Missense_Mutation SNP T C CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 CREB5 9586 CPCGene hg19 7 28844111 28844111 + Missense_Mutation SNP C T CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 WIPF3 644150 CPCGene hg19 7 29924203 29924203 + Missense_Mutation SNP C G CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAM188B 84182 broad.mit.edu hg19 7 30825445 30825445 + Missense_Mutation SNP C T TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx ADCYAP1R1 117 broad.mit.edu hg19 7 31126590 31126590 + Missense_Mutation SNP C T TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx NEUROD6 63974 broad.mit.edu hg19 7 31378446 31378446 + Missense_Mutation SNP A G TCGA-EJ-5494-01 Unknown Somatic WXS Illumina GAIIx CCDC129 223075 EMBL hg19 7 31683486 31683486 + Missense_Mutation SNP T C EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 CCDC129 223075 broad.mit.edu hg19 7 31690866 31690866 + Missense_Mutation SNP C A TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx PDE1C 5137 broad.mit.edu hg19 7 31862844 31862844 + Missense_Mutation SNP C T TCGA-G9-6342-01 Unknown Somatic WXS Illumina GAIIx PDE1C 5137 broad.mit.edu hg19 7 32109962 32109962 + Missense_Mutation SNP G A TCGA-M7-A71Z-01 Unknown Somatic WXS Illumina GAIIx NT5C3A 51251 broad.mit.edu hg19 7 33054388 33054388 + Missense_Mutation SNP T C TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx BBS9 27241 broad.mit.edu hg19 7 33195256 33195256 + Missense_Mutation SNP C T P08-1042 Unknown Somatic WGS Illumina GAIIx ANLN 54443 broad.mit.edu hg19 7 36435954 36435954 + Missense_Mutation SNP C G TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx AOAH 313 broad.mit.edu hg19 7 36580001 36580001 + Missense_Mutation SNP G A PR-09-5630-Tumor Unknown Somatic WXS Illumina GAIIx NME8 51314 broad.mit.edu hg19 7 37903970 37903970 + Missense_Mutation SNP A C TCGA-J4-A67O-01 Unknown Somatic WXS Illumina GAIIx POU6F2 11281 CPCGene hg19 7 39446325 39446325 + Missense_Mutation SNP A G CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 CDK13 8621 broad.mit.edu hg19 7 40039015 40039015 + Missense_Mutation SNP C G TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx CDK13 8621 broad.mit.edu hg19 7 40085626 40085626 + Splice_Site SNP T C TCGA-EJ-7330-01 Unknown Somatic WXS Illumina GAIIx INHBA 3624 CPCGene hg19 7 41729827 41729827 + Missense_Mutation SNP G A CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 C7 730 CPCGene hg19 7 42949774 42949774 + Missense_Mutation SNP G A CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 AEBP1 165 CPCGene hg19 7 44153839 44153839 + Missense_Mutation SNP A T CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 GCK 2645 broad.mit.edu hg19 7 44185094 44185094 + Splice_Site SNP A G TCGA-G9-6365-01 Unknown Somatic WGS Illumina GAIIx NPC1L1 29881 broad.mit.edu hg19 7 44553094 44553094 + Missense_Mutation SNP A C TCGA-M7-A71Y-01 Unknown Somatic WXS Illumina GAIIx NACAD 23148 CPCGene hg19 7 45125114 45125114 + Missense_Mutation SNP G A CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 TNS3 64759 broad.mit.edu hg19 7 47384421 47384421 + Missense_Mutation SNP C T TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx PKD1L1 168507 broad.mit.edu hg19 7 47854957 47854957 + Missense_Mutation SNP G A P05-1657 Unknown Somatic WGS Illumina GAIIx PKD1L1 168507 broad.mit.edu hg19 7 47867054 47867054 + Missense_Mutation SNP G A P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx HUS1 3364 broad.mit.edu hg19 7 48018175 48018175 + Missense_Mutation SNP C A TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx UPP1 7378 broad.mit.edu hg19 7 48141449 48141449 + Missense_Mutation SNP G A TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx ABCA13 154664 broad.mit.edu hg19 7 48338035 48338035 + Missense_Mutation SNP C T P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx ABCA13 154664 CPCGene hg19 7 48352683 48352683 + Missense_Mutation SNP C A CPCG0267-F1 Unknown Somatic WXS Illumina HiSeq 2500 ABCA13 154664 broad.mit.edu hg19 7 48352729 48352729 + Missense_Mutation SNP C T TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx ABCA13 154664 CPCGene hg19 7 48352753 48352753 + Missense_Mutation SNP C T CPCG0095-F1 Unknown Somatic WXS Illumina HiSeq 2500 ABCA13 154664 broad.mit.edu hg19 7 48443343 48443343 + Missense_Mutation SNP C A TCGA-G9-6378-01 Unknown Somatic WXS Illumina GAIIx C7 730 CPCGene hg19 7 50198655 50198655 + Missense_Mutation SNP G C CPCG0124-F1 Unknown Somatic WXS Illumina HiSeq 2500 FIGNL1 63979 CPCGene hg19 7 50513387 50513387 + Missense_Mutation SNP T C CPCG0258-F1 Unknown Somatic WXS Illumina HiSeq 2500 DDC 1644 broad.mit.edu hg19 7 50607643 50607643 + Missense_Mutation SNP G A TCGA-EJ-7330-01 Unknown Somatic WXS Illumina GAIIx POM121L12 285877 broad.mit.edu hg19 7 53103623 53103623 + Missense_Mutation SNP G A TCGA-G9-6379-01 Unknown Somatic WXS Illumina GAIIx POM121L12 285877 CPCGene hg19 7 53103789 53103789 + Missense_Mutation SNP C T CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 POM121L12 285877 CPCGene hg19 7 53103949 53103949 + Missense_Mutation SNP G A CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 POM121L12 285877 broad.mit.edu hg19 7 53104151 53104151 + Missense_Mutation SNP G A TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx VSTM2A 222008 broad.mit.edu hg19 7 54617801 54617801 + Missense_Mutation SNP G A TCGA-J4-A67K-01 Unknown Somatic WXS Illumina GAIIx ZNF713 349075 CPCGene hg19 7 55990914 55990914 + Missense_Mutation SNP G T CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF713 349075 broad.mit.edu hg19 7 56007656 56007656 + Missense_Mutation SNP G T TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx ZNF735P 0 broad.mit.edu hg19 7 63680538 63680538 + Missense_Mutation SNP C T P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx AUTS2 26053 broad.mit.edu hg19 7 70252229 70252229 + Missense_Mutation SNP C A TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx FZD9 8326 broad.mit.edu hg19 7 72849329 72849329 + Missense_Mutation SNP G T P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx TBL2 26608 broad.mit.edu hg19 7 72988435 72988435 + Missense_Mutation SNP T A TCGA-J4-A67Q-01 Unknown Somatic WXS Illumina GAIIx LIMK1 3984 broad.mit.edu hg19 7 73498339 73498339 + Missense_Mutation SNP T G TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx GTF2I 2969 CPCGene hg19 7 74114939 74114939 + Missense_Mutation SNP T C CPCG0205-F1 Unknown Somatic WXS Illumina HiSeq 2500 SRCRB4D 0 broad.mit.edu hg19 7 76029805 76029805 + Missense_Mutation SNP G A TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx PHTF2 57157 broad.mit.edu hg19 7 77469597 77469597 + Missense_Mutation SNP A G TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx MAGI2 9863 broad.mit.edu hg19 7 77764435 77764435 + Missense_Mutation SNP C A TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx MAGI2 9863 CPCGene hg19 7 77814961 77814961 + Missense_Mutation SNP G A CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 GNAI1 2770 CPCGene hg19 7 79840385 79840385 + Missense_Mutation SNP G A CPCG0409-F1 Unknown Somatic WXS Illumina HiSeq 2500 HGF 3082 broad.mit.edu hg19 7 81359092 81359092 + Missense_Mutation SNP T C TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx PCLO 27445 CPCGene hg19 7 82387897 82387897 + Missense_Mutation SNP C T CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCLO 27445 broad.mit.edu hg19 7 82581185 82581185 + Missense_Mutation SNP C T PR-05-839-Tumor Unknown Somatic WXS Illumina GAIIx PCLO 27445 broad.mit.edu hg19 7 82763829 82763829 + Missense_Mutation SNP C G TCGA-G9-6384-01 Unknown Somatic WXS Illumina GAIIx SEMA3E 9723 broad.mit.edu hg19 7 83037758 83037758 + Missense_Mutation SNP T C TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx SEMA3A 10371 CPCGene hg19 7 83592555 83592555 + Missense_Mutation SNP T A CPCG0339-F1 Unknown Somatic WXS Illumina HiSeq 2500 SEMA3D 223117 broad.mit.edu hg19 7 84628811 84628811 + Missense_Mutation SNP C T TCGA-G9-7519-01 Unknown Somatic WXS Illumina GAIIx SEMA3D 223117 CPCGene hg19 7 84629152 84629152 + Missense_Mutation SNP C T CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 GRM3 2913 CPCGene hg19 7 86415937 86415937 + Missense_Mutation SNP C T CPCG0392-F1 Unknown Somatic WXS Illumina HiSeq 2500 ABCB4 5244 broad.mit.edu hg19 7 87092169 87092169 + Missense_Mutation SNP G A P03-2345 Unknown Somatic WGS Illumina GAIIx ABCB1 5243 broad.mit.edu hg19 7 87165839 87165839 + Missense_Mutation SNP C T TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx RUNDC3B 154661 CPCGene hg19 7 87339909 87339909 + Missense_Mutation SNP A G CPCG0255-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAM22 53616 broad.mit.edu hg19 7 87780603 87780603 + Missense_Mutation SNP G T PR-05-839-Tumor Unknown Somatic WXS Illumina GAIIx ADAM22 53616 broad.mit.edu hg19 7 87808341 87808341 + Missense_Mutation SNP T G P09-1580-Tumor Unknown Somatic WXS Illumina GAIIx STEAP2 261729 broad.mit.edu hg19 7 89854551 89854551 + Missense_Mutation SNP G A PR-02-2072-Tumor Unknown Somatic WXS Illumina GAIIx GTPBP10 85865 broad.mit.edu hg19 7 90012333 90012333 + Missense_Mutation SNP G T PR-08-556 Unknown Somatic WGS Illumina GAIIx AKAP9 10142 broad.mit.edu hg19 7 91691589 91691589 + Missense_Mutation SNP C T TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx AKAP9 10142 CPCGene hg19 7 91691697 91691697 + Missense_Mutation SNP G C CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 KRIT1 889 broad.mit.edu hg19 7 91870306 91870306 + Splice_Site SNP C T TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx ANKIB1 54467 CPCGene hg19 7 92020523 92020523 + Missense_Mutation SNP A G CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 PEX1 5189 CPCGene hg19 7 92136330 92136330 + Missense_Mutation SNP G A CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 SAMD9L 219285 CPCGene hg19 7 92760667 92760667 + Missense_Mutation SNP T C CPCG0243-F1 Unknown Somatic WXS Illumina HiSeq 2500 SAMD9L 219285 broad.mit.edu hg19 7 92763568 92763568 + Missense_Mutation SNP C T TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx SAMD9L 219285 CPCGene hg19 7 92764527 92764527 + Missense_Mutation SNP T C CPCG0255-F1 Unknown Somatic WXS Illumina HiSeq 2500 HEPACAM2 253012 broad.mit.edu hg19 7 92838015 92838015 + Missense_Mutation SNP G A TCGA-ZG-A8QX-01 Unknown Somatic WXS Illumina GAIIx CCDC132 0 CPCGene hg19 7 92901956 92901956 + Missense_Mutation SNP G T CPCG0081-F1 Unknown Somatic WXS Illumina HiSeq 2500 CCDC132 0 broad.mit.edu hg19 7 92926509 92926509 + Missense_Mutation SNP G T PR-08-4154 Unknown Somatic WGS Illumina GAIIx GNGT1 2792 broad.mit.edu hg19 7 93536062 93536062 + Missense_Mutation SNP C A TCGA-J4-A67N-01 Unknown Somatic WXS Illumina GAIIx GNG11 2791 broad.mit.edu hg19 7 93555421 93555421 + Missense_Mutation SNP G T P08-1042 Unknown Somatic WGS Illumina GAIIx COL1A2 1278 CPCGene hg19 7 94050355 94050355 + Missense_Mutation SNP G A CPCG0265-F1 Unknown Somatic WXS Illumina HiSeq 2500 DYNC1I1 1780 broad.mit.edu hg19 7 95705500 95705500 + Missense_Mutation SNP T C TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx SHFM1 0 broad.mit.edu hg19 7 96324155 96324155 + Missense_Mutation SNP T C PR-2762-Tumor Unknown Somatic WXS Illumina GAIIx DLX6 1750 CPCGene hg19 7 96639293 96639293 + Missense_Mutation SNP G A CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 LMTK2 22853 broad.mit.edu hg19 7 97822262 97822262 + Missense_Mutation SNP G A TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx LMTK2 22853 broad.mit.edu hg19 7 97823753 97823753 + Missense_Mutation SNP G T TCGA-G9-6333-01 Unknown Somatic WXS Illumina GAIIx NPTX2 4885 broad.mit.edu hg19 7 98256572 98256572 + Missense_Mutation SNP C T PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx ZSCAN25 221785 CPCGene hg19 7 99217255 99217255 + Missense_Mutation SNP C T CPCG0353-F1 Unknown Somatic WXS Illumina HiSeq 2500 CYP3A5 1577 broad.mit.edu hg19 7 99261700 99261700 + Missense_Mutation SNP G A PR-05-3595 Unknown Somatic WGS Illumina GAIIx TRIM4 89122 broad.mit.edu hg19 7 99506411 99506411 + Missense_Mutation SNP T C TCGA-HC-7748-01 Unknown Somatic WXS Illumina GAIIx ZNF3 7551 broad.mit.edu hg19 7 99669788 99669788 + Missense_Mutation SNP T C TCGA-EJ-7123-01 Unknown Somatic WXS Illumina GAIIx COPS6 10980 broad.mit.edu hg19 7 99686969 99686969 + Missense_Mutation SNP C T PR-03-3125 Unknown Somatic WGS Illumina GAIIx COPS6 10980 broad.mit.edu hg19 7 99686977 99686977 + Missense_Mutation SNP C G TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx TAF6 6878 CPCGene hg19 7 99707837 99707837 + Missense_Mutation SNP C A CPCG0269-F1 Unknown Somatic WXS Illumina HiSeq 2500 GATS 352954 CPCGene hg19 7 99821297 99821297 + Missense_Mutation SNP C G CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 NYAP1 222950 broad.mit.edu hg19 7 100084560 100084560 + Missense_Mutation SNP C T TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx AGFG2 3268 broad.mit.edu hg19 7 100162578 100162578 + Missense_Mutation SNP C T P04-594-Tumor Unknown Somatic WXS Illumina GAIIx MOSPD3 64598 broad.mit.edu hg19 7 100211276 100211276 + Missense_Mutation SNP G A PR-3023-Tumor Unknown Somatic WXS Illumina GAIIx GIGYF1 64599 broad.mit.edu hg19 7 100283832 100283832 + Missense_Mutation SNP C G P07-837 Unknown Somatic WGS Illumina GAIIx ZAN 7455 broad.mit.edu hg19 7 100345786 100345786 + Missense_Mutation SNP G T TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx ZAN 7455 broad.mit.edu hg19 7 100348416 100348416 + Missense_Mutation SNP C T PR-04-1243 Unknown Somatic WGS Illumina GAIIx ZAN 7455 broad.mit.edu hg19 7 100350424 100350424 + Missense_Mutation SNP T C P05-3859-Tumor Unknown Somatic WXS Illumina GAIIx ZAN 7455 CPCGene hg19 7 100350424 100350424 + Missense_Mutation SNP T C CPCG0102-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZAN 7455 broad.mit.edu hg19 7 100377174 100377174 + Missense_Mutation SNP G A P08-1042 Unknown Somatic WGS Illumina GAIIx SRRT 51593 CPCGene hg19 7 100479351 100479351 + Missense_Mutation SNP C T CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 SRRT 51593 broad.mit.edu hg19 7 100479735 100479735 + Missense_Mutation SNP G T P04-1421-Tumor Unknown Somatic WXS Illumina GAIIx MUC3A 4584 broad.mit.edu hg19 7 100610299 100610299 + Missense_Mutation SNP C A TCGA-HC-8260-01 Unknown Somatic WXS Illumina GAIIx MUC12 10071 EMBL hg19 7 100635376 100635376 + Missense_Mutation SNP G A EOPC-09 Unknown Somatic WGS Illumina HiSeq2000 MUC17 140453 CPCGene hg19 7 100676523 100676523 + Missense_Mutation SNP C A CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 MUC17 140453 broad.mit.edu hg19 7 100681317 100681317 + Missense_Mutation SNP G A TCGA-CH-5740-01 Unknown Somatic WXS Illumina GAIIx MUC17 140453 broad.mit.edu hg19 7 100682353 100682353 + Missense_Mutation SNP C A TCGA-2A-A8VV-01 Unknown Somatic WXS Illumina GAIIx MUC17 140453 CPCGene hg19 7 100682448 100682448 + Missense_Mutation SNP A C CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 MUC17 140453 CPCGene hg19 7 100685310 100685310 + Missense_Mutation SNP C T CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 MUC17 140453 CPCGene hg19 7 100694910 100694910 + Missense_Mutation SNP C A CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 NAT16 375607 CPCGene hg19 7 100817916 100817916 + Missense_Mutation SNP G C CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 MOGAT3 346606 broad.mit.edu hg19 7 100839218 100839218 + Missense_Mutation SNP C T TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx PLOD3 8985 broad.mit.edu hg19 7 100859736 100859736 + Missense_Mutation SNP T C TCGA-VP-A87C-01 Unknown Somatic WXS Illumina GAIIx CUX1 1523 broad.mit.edu hg19 7 101923363 101923363 + Missense_Mutation SNP C T P03-871-Tumor Unknown Somatic WXS Illumina GAIIx ALKBH4 54784 broad.mit.edu hg19 7 102100103 102100103 + Missense_Mutation SNP C T TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx RELN 5649 broad.mit.edu hg19 7 103180802 103180802 + Missense_Mutation SNP A G TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx RELN 5649 CPCGene hg19 7 103205778 103205778 + Missense_Mutation SNP C T CPCG0374-F1 Unknown Somatic WXS Illumina HiSeq 2500 RELN 5649 broad.mit.edu hg19 7 103341383 103341383 + Missense_Mutation SNP C T TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx ATXN7L1 222255 CPCGene hg19 7 105264608 105264608 + Missense_Mutation SNP A C CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 CDHR3 222256 broad.mit.edu hg19 7 105660967 105660967 + Missense_Mutation SNP C T TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx NAMPT 10135 EMBL hg19 7 105909031 105909031 + Missense_Mutation SNP C T EOPC-05 Unknown Somatic WGS Illumina HiSeq2000 PIK3CG 5294 broad.mit.edu hg19 7 106508996 106508996 + Missense_Mutation SNP G T TCGA-HC-8256-01 Unknown Somatic WXS Illumina GAIIx PIK3CG 5294 broad.mit.edu hg19 7 106513199 106513199 + Missense_Mutation SNP T C TCGA-G9-7525-01 Unknown Somatic WXS Illumina GAIIx SLC26A4 5172 CPCGene hg19 7 107340590 107340590 + Missense_Mutation SNP C T CPCG0048-F1 Unknown Somatic WXS Illumina HiSeq 2500 LAMB1 3912 broad.mit.edu hg19 7 107575964 107575964 + Missense_Mutation SNP C T TCGA-EJ-5509-01 Unknown Somatic WXS Illumina GAIIx LAMB1 3912 CPCGene hg19 7 107592475 107592475 + Missense_Mutation SNP G C CPCG0348-F1 Unknown Somatic WXS Illumina HiSeq 2500 NRCAM 4897 broad.mit.edu hg19 7 107818507 107818507 + Missense_Mutation SNP G A PR-04-639-Tumor Unknown Somatic WXS Illumina GAIIx NRCAM 4897 CPCGene hg19 7 107849890 107849890 + Missense_Mutation SNP G A CPCG0121-F1 Unknown Somatic WXS Illumina HiSeq 2500 THAP5 168451 CPCGene hg19 7 108205550 108205550 + Splice_Site SNP C T CPCG0217-F1 Unknown Somatic WXS Illumina HiSeq 2500 C7 730 broad.mit.edu hg19 7 108524126 108524126 + Missense_Mutation SNP G A TCGA-HC-7212-01 Unknown Somatic WXS Illumina GAIIx C7 730 broad.mit.edu hg19 7 108524200 108524200 + Missense_Mutation SNP C T P08-501 Unknown Somatic WGS Illumina GAIIx ZNF277 11179 CPCGene hg19 7 111982689 111982689 + Missense_Mutation SNP C T CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 FOXP2 93986 broad.mit.edu hg19 7 114299484 114299484 + Missense_Mutation SNP G C TCGA-EJ-8470-01 Unknown Somatic WXS Illumina GAIIx TFEC 22797 CPCGene hg19 7 115582087 115582087 + Missense_Mutation SNP G A CPCG0412-F1 Unknown Somatic WXS Illumina HiSeq 2500 MET 4233 CPCGene hg19 7 116435984 116435984 + Missense_Mutation SNP C T CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 WNT2 7472 broad.mit.edu hg19 7 116937778 116937778 + Missense_Mutation SNP G C TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx ASZ1 136991 broad.mit.edu hg19 7 117067495 117067495 + Missense_Mutation SNP C T PR-04-1243 Unknown Somatic WGS Illumina GAIIx CTTNBP2 83992 CPCGene hg19 7 117351812 117351812 + Missense_Mutation SNP G C CPCG0372-F1 Unknown Somatic WXS Illumina HiSeq 2500 CTTNBP2 83992 broad.mit.edu hg19 7 117386131 117386131 + Missense_Mutation SNP A T TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx CTTNBP2 83992 broad.mit.edu hg19 7 117400554 117400554 + Missense_Mutation SNP G T TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx CTTNBP2 83992 broad.mit.edu hg19 7 117417799 117417799 + Missense_Mutation SNP G A P08-716 Unknown Somatic WGS Illumina GAIIx CADPS2 93664 CPCGene hg19 7 122019464 122019464 + Missense_Mutation SNP G A CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 CADPS2 93664 CPCGene hg19 7 122377022 122377022 + Missense_Mutation SNP C T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 TAS2R16 50833 broad.mit.edu hg19 7 122635122 122635122 + Missense_Mutation SNP G T P00-000450-Tumor Unknown Somatic WXS Illumina GAIIx TAS2R16 50833 CPCGene hg19 7 122635281 122635281 + Missense_Mutation SNP A T CPCG0217-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC13A1 6561 broad.mit.edu hg19 7 122765715 122765715 + Missense_Mutation SNP G T P00-000450-Tumor Unknown Somatic WXS Illumina GAIIx GPR37 2861 CPCGene hg19 7 124387316 124387316 + Missense_Mutation SNP A T CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 POT1 25913 broad.mit.edu hg19 7 124537227 124537227 + Missense_Mutation SNP T C TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx GRM8 2918 CPCGene hg19 7 126086303 126086303 + Missense_Mutation SNP G A CPCG0336-F1 Unknown Somatic WXS Illumina HiSeq 2500 GCC1 79571 broad.mit.edu hg19 7 127223227 127223227 + Missense_Mutation SNP G A PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx PAX4 5078 broad.mit.edu hg19 7 127253535 127253535 + Missense_Mutation SNP G T PR-3042 Unknown Somatic WGS Illumina GAIIx PAX4 5078 broad.mit.edu hg19 7 127255106 127255106 + Missense_Mutation SNP C T TCGA-HC-7075-01 Unknown Somatic WGS Illumina GAIIx FLNC 2318 CPCGene hg19 7 128477804 128477804 + Missense_Mutation SNP G A CPCG0380-F1 Unknown Somatic WXS Illumina HiSeq 2500 KCP 375616 EMBL hg19 7 128517103 128517103 + Missense_Mutation SNP T G EOPC-10 Unknown Somatic WGS Illumina HiSeq2000 IRF5 3663 broad.mit.edu hg19 7 128587374 128587374 + Missense_Mutation SNP G A PR-02-2480-Tumor Unknown Somatic WXS Illumina GAIIx CEP41 95681 CPCGene hg19 7 130042586 130042586 + Missense_Mutation SNP T C CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 PLXNA4 91584 broad.mit.edu hg19 7 132169640 132169640 + Missense_Mutation SNP T C TCGA-G9-6379-01 Unknown Somatic WXS Illumina GAIIx NUP205 23165 broad.mit.edu hg19 7 135300708 135300708 + Missense_Mutation SNP A G TCGA-J4-A67L-01 Unknown Somatic WXS Illumina GAIIx CHRM2 1129 CPCGene hg19 7 136700368 136700368 + Missense_Mutation SNP C T CPCG0380-F1 Unknown Somatic WXS Illumina HiSeq 2500 DGKI 9162 CPCGene hg19 7 137308239 137308239 + Missense_Mutation SNP C T CPCG0259-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZC3HAV1 56829 broad.mit.edu hg19 7 138764546 138764546 + Missense_Mutation SNP G C TCGA-CH-5745-01 Unknown Somatic WXS Illumina GAIIx ZC3HAV1 56829 CPCGene hg19 7 138764866 138764866 + Missense_Mutation SNP G C CPCG0375-F1 Unknown Somatic WXS Illumina HiSeq 2500 HIPK2 28996 broad.mit.edu hg19 7 139285234 139285234 + Missense_Mutation SNP G A TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx TBXAS1 6916 broad.mit.edu hg19 7 139572059 139572059 + Missense_Mutation SNP C A TCGA-2A-A8VO-01 Unknown Somatic WXS Illumina GAIIx DENND2A 27147 CPCGene hg19 7 140219452 140219452 + Missense_Mutation SNP T C CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADCK2 90956 broad.mit.edu hg19 7 140374504 140374504 + Missense_Mutation SNP T G P04-594-Tumor Unknown Somatic WXS Illumina GAIIx ADCK2 90956 CPCGene hg19 7 140387009 140387009 + Missense_Mutation SNP C T CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 BRAF 673 broad.mit.edu hg19 7 140453134 140453134 + Missense_Mutation SNP T C P07-5318 Unknown Somatic WGS Illumina GAIIx BRAF 673 CPCGene hg19 7 140453134 140453134 + Missense_Mutation SNP T C CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 BRAF 673 broad.mit.edu hg19 7 140481402 140481402 + Missense_Mutation SNP C G TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx AGK 55750 broad.mit.edu hg19 7 141315346 141315346 + Missense_Mutation SNP G T TCGA-EJ-5512-01 Unknown Somatic WXS Illumina GAIIx TAS2R5 54429 broad.mit.edu hg19 7 141490469 141490469 + Missense_Mutation SNP A G TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx OR9A4 130075 broad.mit.edu hg19 7 141619594 141619594 + Missense_Mutation SNP C T P08-492 Unknown Somatic WGS Illumina GAIIx CLEC5A 23601 broad.mit.edu hg19 7 141635653 141635653 + Missense_Mutation SNP T C TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx MGAM 8972 broad.mit.edu hg19 7 141755482 141755482 + Missense_Mutation SNP G A PR-0508 Unknown Somatic WGS Illumina GAIIx PRSS58 136541 broad.mit.edu hg19 7 141955370 141955370 + Missense_Mutation SNP G A TCGA-EJ-5532-01 Unknown Somatic WXS Illumina GAIIx PRSS1 5644 broad.mit.edu hg19 7 142459835 142459835 + Missense_Mutation SNP G A P07-837 Unknown Somatic WGS Illumina GAIIx TRPV6 55503 broad.mit.edu hg19 7 142573415 142573415 + Missense_Mutation SNP G C PR-09-5446-Tumor Unknown Somatic WXS Illumina GAIIx OR9A2 135924 CPCGene hg19 7 142723617 142723617 + Missense_Mutation SNP A T CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMEM139 135932 broad.mit.edu hg19 7 142983609 142983609 + Missense_Mutation SNP C T TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx CLCN1 1180 broad.mit.edu hg19 7 143029831 143029831 + Missense_Mutation SNP A C TCGA-EJ-7325-01 Unknown Somatic WXS Illumina GAIIx OR2F2 135948 broad.mit.edu hg19 7 143632698 143632698 + Missense_Mutation SNP G A TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx OR2A25 392138 broad.mit.edu hg19 7 143771732 143771732 + Missense_Mutation SNP C A P08-492 Unknown Somatic WGS Illumina GAIIx CNTNAP2 26047 broad.mit.edu hg19 7 146829588 146829588 + Missense_Mutation SNP C T TCGA-2A-A8VL-01 Unknown Somatic WXS Illumina GAIIx C7 730 broad.mit.edu hg19 7 148288133 148288133 + Missense_Mutation SNP G A TCGA-HC-7750-01 Unknown Somatic WXS Illumina GAIIx C7 730 broad.mit.edu hg19 7 148311374 148311374 + Missense_Mutation SNP A T P05-3859-Tumor Unknown Somatic WXS Illumina GAIIx ZNF398 57541 broad.mit.edu hg19 7 148851119 148851119 + Missense_Mutation SNP T A P08-501 Unknown Somatic WGS Illumina GAIIx ZNF282 8427 broad.mit.edu hg19 7 148921564 148921564 + Missense_Mutation SNP A G PR-09-5702-Tumor Unknown Somatic WXS Illumina GAIIx KRBA1 84626 broad.mit.edu hg19 7 149430771 149430771 + Missense_Mutation SNP C T TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx SSPO 23145 broad.mit.edu hg19 7 149489766 149489766 + Missense_Mutation SNP G A TCGA-EJ-7784-01 Unknown Somatic WXS Illumina GAIIx SSPO 23145 broad.mit.edu hg19 7 149505742 149505742 + Missense_Mutation SNP G T TCGA-EJ-5527-01 Unknown Somatic WXS Illumina GAIIx SSPO 23145 broad.mit.edu hg19 7 149509149 149509149 + Missense_Mutation SNP C T TCGA-J4-A67L-01 Unknown Somatic WXS Illumina GAIIx SSPO 23145 broad.mit.edu hg19 7 149526028 149526028 + Missense_Mutation SNP G A TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx ZNF862 643641 broad.mit.edu hg19 7 149556518 149556518 + Missense_Mutation SNP C T TCGA-HC-8259-01 Unknown Somatic WXS Illumina GAIIx ZNF862 643641 CPCGene hg19 7 149556522 149556522 + Missense_Mutation SNP G T CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 GIMAP7 168537 broad.mit.edu hg19 7 150217708 150217708 + Missense_Mutation SNP C T TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx AOC1 26 broad.mit.edu hg19 7 150554545 150554545 + Missense_Mutation SNP C T TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx AOC1 26 CPCGene hg19 7 150555049 150555049 + Missense_Mutation SNP C T CPCG0196-F1 Unknown Somatic WXS Illumina HiSeq 2500 NOS3 4846 broad.mit.edu hg19 7 150711149 150711149 + Missense_Mutation SNP G A P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx CDK5 1020 broad.mit.edu hg19 7 150752140 150752140 + Missense_Mutation SNP G T TCGA-J4-A83K-01 Unknown Somatic WXS Illumina GAIIx SLC4A2 6522 broad.mit.edu hg19 7 150759094 150759094 + Missense_Mutation SNP G T PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx SLC4A2 6522 broad.mit.edu hg19 7 150769065 150769065 + Missense_Mutation SNP C T PR-2761-Tumor Unknown Somatic WXS Illumina GAIIx KMT2C 58508 broad.mit.edu hg19 7 151878166 151878166 + Missense_Mutation SNP G C TCGA-HC-7817-01 Unknown Somatic WXS Illumina GAIIx KMT2C 58508 CPCGene hg19 7 151878785 151878785 + Missense_Mutation SNP G C CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 KMT2C 58508 broad.mit.edu hg19 7 151882657 151882657 + Missense_Mutation SNP T G TCGA-J4-A83L-01 Unknown Somatic WXS Illumina GAIIx KMT2C 58508 broad.mit.edu hg19 7 151882657 151882657 + Missense_Mutation SNP T G PR-0099-Tumor Unknown Somatic WXS Illumina GAIIx KMT2C 58508 CPCGene hg19 7 151882660 151882660 + Missense_Mutation SNP C A CPCG0334-F1 Unknown Somatic WXS Illumina HiSeq 2500 KMT2C 58508 CPCGene hg19 7 151882672 151882672 + Missense_Mutation SNP C A CPCG0234-F1 Unknown Somatic WXS Illumina HiSeq 2500 KMT2C 58508 EMBL hg19 7 151945140 151945140 + Missense_Mutation SNP C T EOPC-04 Unknown Somatic WGS Illumina HiSeq2000 KMT2C 58508 broad.mit.edu hg19 7 151970797 151970797 + Missense_Mutation SNP A T TCGA-EJ-7317-01 Unknown Somatic WXS Illumina GAIIx KMT2C 58508 CPCGene hg19 7 151970797 151970797 + Missense_Mutation SNP A T CPCG0087-F1 Unknown Somatic WXS Illumina HiSeq 2500 KMT2C 58508 broad.mit.edu hg19 7 151970856 151970856 + Missense_Mutation SNP T A TCGA-EJ-5510-01 Unknown Somatic WXS Illumina GAIIx KMT2C 58508 broad.mit.edu hg19 7 151970856 151970856 + Missense_Mutation SNP T A TCGA-HC-8260-01 Unknown Somatic WXS Illumina GAIIx KMT2C 58508 broad.mit.edu hg19 7 151970856 151970856 + Missense_Mutation SNP T A TCGA-G9-6348-01 Unknown Somatic WXS Illumina GAIIx KMT2C 58508 broad.mit.edu hg19 7 151970856 151970856 + Missense_Mutation SNP T A TCGA-HC-7078-01 Unknown Somatic WXS Illumina GAIIx XRCC2 7516 broad.mit.edu hg19 7 152345961 152345961 + Missense_Mutation SNP C T PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx DPP6 1804 broad.mit.edu hg19 7 154237697 154237697 + Missense_Mutation SNP G T P05-2594-Tumor Unknown Somatic WXS Illumina GAIIx DPP6 1804 broad.mit.edu hg19 7 154379675 154379675 + Missense_Mutation SNP C T TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx HTR5A 3361 broad.mit.edu hg19 7 154862620 154862620 + Missense_Mutation SNP C T TCGA-G9-6384-01 Unknown Somatic WXS Illumina GAIIx EN2 2020 broad.mit.edu hg19 7 155255151 155255151 + Missense_Mutation SNP G A TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx LMBR1 64327 CPCGene hg19 7 156555808 156555808 + Missense_Mutation SNP G C CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 NCAPG2 54892 broad.mit.edu hg19 7 158451099 158451099 + Missense_Mutation SNP T A TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx ESYT2 57488 broad.mit.edu hg19 7 158534551 158534551 + Missense_Mutation SNP G C TCGA-G9-6333-01 Unknown Somatic WXS Illumina GAIIx VIPR2 7434 CPCGene hg19 7 158826985 158826985 + Missense_Mutation SNP A T CPCG0374-F1 Unknown Somatic WXS Illumina HiSeq 2500 FBXO25 26260 broad.mit.edu hg19 8 401450 401450 + Missense_Mutation SNP T A PR-04-3347-Tumor Unknown Somatic WXS Illumina GAIIx DLGAP2 9228 broad.mit.edu hg19 8 1497834 1497834 + Missense_Mutation SNP G A TCGA-EJ-5522-01 Unknown Somatic WXS Illumina GAIIx DLGAP2 9228 broad.mit.edu hg19 8 1626449 1626449 + Missense_Mutation SNP C T PR-3051-Tumor Unknown Somatic WXS Illumina GAIIx DLGAP2 9228 broad.mit.edu hg19 8 1626466 1626466 + Missense_Mutation SNP C T TCGA-G9-6365-01 Unknown Somatic WGS Illumina GAIIx CLN8 2055 broad.mit.edu hg19 8 1728426 1728426 + Missense_Mutation SNP C G TCGA-Y6-A8TL-01 Unknown Somatic WXS Illumina GAIIx ARHGEF10 9639 broad.mit.edu hg19 8 1900969 1900969 + Missense_Mutation SNP C T TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx MYOM2 9172 broad.mit.edu hg19 8 2021549 2021549 + Missense_Mutation SNP C T TCGA-J4-A67Q-01 Unknown Somatic WXS Illumina GAIIx CSMD1 64478 broad.mit.edu hg19 8 2806884 2806884 + Missense_Mutation SNP C A TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx CSMD1 64478 broad.mit.edu hg19 8 2808727 2808727 + Missense_Mutation SNP G A PR-09-2517-Tumor Unknown Somatic WXS Illumina GAIIx CSMD1 64478 broad.mit.edu hg19 8 2820915 2820915 + Missense_Mutation SNP C T TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx CSMD1 64478 CPCGene hg19 8 2886845 2886845 + Missense_Mutation SNP A G CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 CSMD1 64478 broad.mit.edu hg19 8 2910129 2910129 + Missense_Mutation SNP T A TCGA-EJ-5522-01 Unknown Somatic WXS Illumina GAIIx CSMD1 64478 broad.mit.edu hg19 8 3000092 3000092 + Missense_Mutation SNP C T PR-09-2744-Tumor Unknown Somatic WXS Illumina GAIIx CSMD1 64478 broad.mit.edu hg19 8 3047474 3047474 + Missense_Mutation SNP G A TCGA-HC-8261-01 Unknown Somatic WXS Illumina GAIIx CSMD1 64478 broad.mit.edu hg19 8 3047474 3047474 + Missense_Mutation SNP G A TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx CSMD1 64478 broad.mit.edu hg19 8 3267090 3267090 + Missense_Mutation SNP G A TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx CSMD1 64478 CPCGene hg19 8 3611511 3611511 + Missense_Mutation SNP C T CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 MCPH1 79648 broad.mit.edu hg19 8 6302907 6302907 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx SGK223 0 broad.mit.edu hg19 8 8197148 8197148 + Missense_Mutation SNP G A PR-02-2072-Tumor Unknown Somatic WXS Illumina GAIIx MFHAS1 9258 broad.mit.edu hg19 8 8748174 8748174 + Missense_Mutation SNP G A TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx TNKS 8658 CPCGene hg19 8 9473136 9473136 + Missense_Mutation SNP G T CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 TNKS 8658 broad.mit.edu hg19 8 9564481 9564481 + Missense_Mutation SNP C T TCGA-2A-A8W1-01 Unknown Somatic WXS Illumina GAIIx RP1L1 94137 CPCGene hg19 8 10466019 10466019 + Missense_Mutation SNP A T CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 RP1L1 94137 broad.mit.edu hg19 8 10466019 10466019 + Missense_Mutation SNP A T PR-02-254-Tumor Unknown Somatic WXS Illumina GAIIx RP1L1 94137 CPCGene hg19 8 10468117 10468117 + Missense_Mutation SNP C G CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 RP1L1 94137 broad.mit.edu hg19 8 10474068 10474068 + Missense_Mutation SNP G T TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx USP17L2 377630 CPCGene hg19 8 11995041 11995041 + Missense_Mutation SNP C A CPCG0234-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIAA1456 57604 EMBL hg19 8 12863817 12863817 + Missense_Mutation SNP C T EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 DLC1 10395 broad.mit.edu hg19 8 13162748 13162748 + Missense_Mutation SNP C T TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx DLC1 10395 broad.mit.edu hg19 8 13259101 13259101 + Missense_Mutation SNP G A P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx SH2D4A 63898 broad.mit.edu hg19 8 19218826 19218826 + Splice_Site SNP G A TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx DOK2 9046 broad.mit.edu hg19 8 21768204 21768204 + Missense_Mutation SNP G A PR-04-1243 Unknown Somatic WGS Illumina GAIIx DOK2 9046 CPCGene hg19 8 21769795 21769795 + Missense_Mutation SNP G C CPCG0090-F1 Unknown Somatic WXS Illumina HiSeq 2500 PHYHIP 9796 broad.mit.edu hg19 8 22079251 22079251 + Missense_Mutation SNP C T TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx CCAR2 57805 broad.mit.edu hg19 8 22464425 22464425 + Missense_Mutation SNP T C TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx TNFRSF10D 8793 broad.mit.edu hg19 8 23004490 23004490 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx R3HCC1 203069 CPCGene hg19 8 23147963 23147963 + Missense_Mutation SNP A G CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 LOXL2 4017 broad.mit.edu hg19 8 23191091 23191091 + Missense_Mutation SNP C T TCGA-EJ-5542-01 Unknown Somatic WXS Illumina GAIIx ENTPD4 9583 broad.mit.edu hg19 8 23290499 23290499 + Missense_Mutation SNP C T TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx NKX3-1 4824 CPCGene hg19 8 23538909 23538909 + Missense_Mutation SNP T C CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 NKX3-1 4824 broad.mit.edu hg19 8 23538909 23538909 + Missense_Mutation SNP T C TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx ADAM28 10863 CPCGene hg19 8 24168921 24168921 + Missense_Mutation SNP C T CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAMDEC1 27299 broad.mit.edu hg19 8 24254909 24254909 + Missense_Mutation SNP G A TCGA-HC-8256-01 Unknown Somatic WXS Illumina GAIIx CDCA2 157313 broad.mit.edu hg19 8 25340925 25340925 + Missense_Mutation SNP A T TCGA-Y6-A8TL-01 Unknown Somatic WXS Illumina GAIIx CDCA2 157313 broad.mit.edu hg19 8 25364244 25364244 + Missense_Mutation SNP A C TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx CDCA2 157313 broad.mit.edu hg19 8 25364684 25364684 + Missense_Mutation SNP G A PR-0508 Unknown Somatic WGS Illumina GAIIx EBF2 64641 broad.mit.edu hg19 8 25718721 25718721 + Missense_Mutation SNP C T PR-09-5700-Tumor Unknown Somatic WXS Illumina GAIIx EBF2 64641 broad.mit.edu hg19 8 25745360 25745360 + Missense_Mutation SNP C T TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx PTK2B 2185 CPCGene hg19 8 27312127 27312127 + Missense_Mutation SNP A G CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 SCARA5 286133 CPCGene hg19 8 27823987 27823987 + Missense_Mutation SNP A G CPCG0379-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZNF395 55893 broad.mit.edu hg19 8 28207670 28207670 + Missense_Mutation SNP G C P07-144 Unknown Somatic WGS Illumina GAIIx KIF13B 23303 CPCGene hg19 8 28984761 28984761 + Missense_Mutation SNP C A CPCG0387-F1 Unknown Somatic WXS Illumina HiSeq 2500 DCTN6 10671 broad.mit.edu hg19 8 30032610 30032610 + Missense_Mutation SNP C G PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx GTF2E2 2961 broad.mit.edu hg19 8 30437879 30437879 + Missense_Mutation SNP A C TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx GSR 2936 broad.mit.edu hg19 8 30565649 30565649 + Missense_Mutation SNP C G PR-09-2517-Tumor Unknown Somatic WXS Illumina GAIIx TEX15 56154 broad.mit.edu hg19 8 30694898 30694898 + Missense_Mutation SNP C T TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx TEX15 56154 broad.mit.edu hg19 8 30702739 30702739 + Missense_Mutation SNP G A P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx WRN 7486 CPCGene hg19 8 30958371 30958371 + Missense_Mutation SNP C T CPCG0262-F1 Unknown Somatic WXS Illumina HiSeq 2500 NRG1 3084 broad.mit.edu hg19 8 32599590 32599590 + Missense_Mutation SNP G T TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx NRG1 3084 broad.mit.edu hg19 8 32621514 32621514 + Missense_Mutation SNP C T TCGA-2A-A8VL-01 Unknown Somatic WXS Illumina GAIIx NRG1 3084 CPCGene hg19 8 32621621 32621621 + Missense_Mutation SNP G A CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 RAB11FIP1 80223 broad.mit.edu hg19 8 37732086 37732086 + Missense_Mutation SNP C T TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx GOT1L1 137362 broad.mit.edu hg19 8 37794525 37794525 + Missense_Mutation SNP C A TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx WHSC1L1 0 CPCGene hg19 8 38146025 38146025 + Missense_Mutation SNP T C CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 FGFR1 2260 CPCGene hg19 8 38272370 38272370 + Missense_Mutation SNP T G CPCG0190-F1 Unknown Somatic WXS Illumina HiSeq 2500 FGFR1 2260 broad.mit.edu hg19 8 38285495 38285495 + Missense_Mutation SNP G A PR-04-1243 Unknown Somatic WGS Illumina GAIIx ADAM18 8749 broad.mit.edu hg19 8 39495171 39495171 + Missense_Mutation SNP G A TCGA-2A-A8VL-01 Unknown Somatic WXS Illumina GAIIx ADAM18 8749 broad.mit.edu hg19 8 39496036 39496036 + Missense_Mutation SNP A C PR-3043 Unknown Somatic WGS Illumina GAIIx ADAM18 8749 broad.mit.edu hg19 8 39525629 39525629 + Missense_Mutation SNP G T TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx ADAM18 8749 broad.mit.edu hg19 8 39525630 39525630 + Missense_Mutation SNP C T TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx ADAM18 8749 CPCGene hg19 8 39587441 39587441 + Missense_Mutation SNP C T CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAM2 2515 broad.mit.edu hg19 8 39607251 39607251 + Missense_Mutation SNP G A P09-37 Unknown Somatic WGS Illumina GAIIx ANK1 286 broad.mit.edu hg19 8 41557063 41557063 + Missense_Mutation SNP T G TCGA-HC-7075-01 Unknown Somatic WGS Illumina GAIIx ANK1 286 broad.mit.edu hg19 8 41572581 41572581 + Missense_Mutation SNP G A TCGA-EJ-5522-01 Unknown Somatic WXS Illumina GAIIx KAT6A 7994 broad.mit.edu hg19 8 41798713 41798713 + Missense_Mutation SNP G A PR-07-4610 Unknown Somatic WGS Illumina GAIIx KAT6A 7994 CPCGene hg19 8 41812878 41812878 + Missense_Mutation SNP T C CPCG0259-F1 Unknown Somatic WXS Illumina HiSeq 2500 KAT6A 7994 CPCGene hg19 8 41832224 41832224 + Missense_Mutation SNP G A CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 KAT6A 7994 broad.mit.edu hg19 8 41836190 41836190 + Missense_Mutation SNP G A TCGA-QU-A6IO-01 Unknown Somatic WXS Illumina GAIIx KAT6A 7994 CPCGene hg19 8 41839414 41839414 + Missense_Mutation SNP C A CPCG0184-F1 Unknown Somatic WXS Illumina HiSeq 2500 THAP1 55145 broad.mit.edu hg19 8 42698212 42698212 + Missense_Mutation SNP C A PR-04-1243 Unknown Somatic WGS Illumina GAIIx HOOK3 84376 CPCGene hg19 8 42798566 42798566 + Missense_Mutation SNP T C CPCG0237-F1 Unknown Somatic WXS Illumina HiSeq 2500 HOOK3 84376 broad.mit.edu hg19 8 42852766 42852766 + Missense_Mutation SNP T C TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx HOOK3 84376 CPCGene hg19 8 42865485 42865485 + Missense_Mutation SNP G C CPCG0356-F1 Unknown Somatic WXS Illumina HiSeq 2500 HOOK3 84376 CPCGene hg19 8 42865534 42865534 + Missense_Mutation SNP G C CPCG0356-F1 Unknown Somatic WXS Illumina HiSeq 2500 FNTA 2339 CPCGene hg19 8 42924795 42924795 + Missense_Mutation SNP C G CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 HGSNAT 138050 broad.mit.edu hg19 8 43033353 43033353 + Missense_Mutation SNP A T P08-1042 Unknown Somatic WGS Illumina GAIIx PRKDC 5591 broad.mit.edu hg19 8 48713379 48713379 + Missense_Mutation SNP C A P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx PRKDC 5591 broad.mit.edu hg19 8 48739269 48739269 + Missense_Mutation SNP G T TCGA-HC-7820-01 Unknown Somatic WXS Illumina GAIIx PRKDC 5591 CPCGene hg19 8 48869952 48869952 + Missense_Mutation SNP A C CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 SNAI2 6591 broad.mit.edu hg19 8 49832945 49832945 + Missense_Mutation SNP T G P05-620 Unknown Somatic WGS Illumina GAIIx C8 0 broad.mit.edu hg19 8 49986680 49986680 + Missense_Mutation SNP G A PR-00-1823-Tumor Unknown Somatic WXS Illumina GAIIx RGS20 8601 CPCGene hg19 8 54764621 54764621 + Missense_Mutation SNP C A CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 SOX17 64321 broad.mit.edu hg19 8 55371662 55371662 + Missense_Mutation SNP G A TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx RP1 6101 broad.mit.edu hg19 8 55534032 55534032 + Missense_Mutation SNP C T TCGA-J4-A83N-01 Unknown Somatic WXS Illumina GAIIx RP1 6101 broad.mit.edu hg19 8 55540415 55540415 + Missense_Mutation SNP G A TCGA-HC-7747-01 Unknown Somatic WXS Illumina GAIIx RP1 6101 broad.mit.edu hg19 8 55540777 55540777 + Missense_Mutation SNP T A TCGA-VN-A88N-01 Unknown Somatic WXS Illumina GAIIx RP1 6101 broad.mit.edu hg19 8 55542393 55542393 + Missense_Mutation SNP C T TCGA-EJ-7792-01 Unknown Somatic WXS Illumina GAIIx RP1 6101 broad.mit.edu hg19 8 55542673 55542673 + Missense_Mutation SNP G A P07-718-Tumor Unknown Somatic WXS Illumina GAIIx RP1 6101 CPCGene hg19 8 55542762 55542762 + Missense_Mutation SNP A G CPCG0324-F1 Unknown Somatic WXS Illumina HiSeq 2500 RP1 6101 CPCGene hg19 8 55542850 55542850 + Missense_Mutation SNP G A CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 XKR4 114786 CPCGene hg19 8 56436490 56436490 + Missense_Mutation SNP C T CPCG0003-F1 Unknown Somatic WXS Illumina HiSeq 2500 XKR4 114786 broad.mit.edu hg19 8 56436598 56436598 + Missense_Mutation SNP C T TCGA-HC-7748-01 Unknown Somatic WXS Illumina GAIIx CYP7A1 1581 broad.mit.edu hg19 8 59410894 59410894 + Missense_Mutation SNP A G TCGA-HC-7750-01 Unknown Somatic WXS Illumina GAIIx SDCBP 6386 broad.mit.edu hg19 8 59490716 59490716 + Missense_Mutation SNP A T TCGA-J4-A67L-01 Unknown Somatic WXS Illumina GAIIx CA8 767 broad.mit.edu hg19 8 61178528 61178528 + Missense_Mutation SNP G A TCGA-EJ-7327-01 Unknown Somatic WXS Illumina GAIIx CHD7 55636 broad.mit.edu hg19 8 61654328 61654328 + Missense_Mutation SNP G C TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx CHD7 55636 CPCGene hg19 8 61763601 61763601 + Missense_Mutation SNP G T CPCG0372-F1 Unknown Somatic WXS Illumina HiSeq 2500 CHD7 55636 CPCGene hg19 8 61769257 61769257 + Missense_Mutation SNP C T CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 CHD7 55636 broad.mit.edu hg19 8 61777895 61777895 + Missense_Mutation SNP G A TCGA-FC-7708-01 Unknown Somatic WXS Illumina GAIIx NKAIN3 286183 CPCGene hg19 8 63659542 63659542 + Missense_Mutation SNP G A CPCG0238-F1 Unknown Somatic WXS Illumina HiSeq 2500 PDE7A 5150 broad.mit.edu hg19 8 66753620 66753620 + Missense_Mutation SNP G A TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx TRIM55 84675 broad.mit.edu hg19 8 67061964 67061964 + Missense_Mutation SNP A G PR-3043 Unknown Somatic WGS Illumina GAIIx MCMDC2 157777 CPCGene hg19 8 67796096 67796096 + Missense_Mutation SNP A G CPCG0184-F1 Unknown Somatic WXS Illumina HiSeq 2500 PPP1R42 286187 broad.mit.edu hg19 8 67900709 67900709 + Missense_Mutation SNP A G TCGA-EJ-A65E-01 Unknown Somatic WXS Illumina GAIIx CSPP1 79848 CPCGene hg19 8 68005849 68005849 + Missense_Mutation SNP G C CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 CSPP1 79848 CPCGene hg19 8 68044184 68044184 + Splice_Site SNP A G CPCG0047-F1 Unknown Somatic WXS Illumina HiSeq 2500 CSPP1 79848 broad.mit.edu hg19 8 68087551 68087551 + Missense_Mutation SNP C T TCGA-J4-A83N-01 Unknown Somatic WXS Illumina GAIIx ARFGEF1 10565 broad.mit.edu hg19 8 68178397 68178397 + Missense_Mutation SNP G C TCGA-G9-6333-01 Unknown Somatic WXS Illumina GAIIx PREX2 80243 broad.mit.edu hg19 8 68950516 68950516 + Missense_Mutation SNP A T TCGA-G9-6365-01 Unknown Somatic WGS Illumina GAIIx SULF1 23213 CPCGene hg19 8 70488276 70488276 + Missense_Mutation SNP G T CPCG0365-F1 Unknown Somatic WXS Illumina HiSeq 2500 NCOA2 10499 broad.mit.edu hg19 8 71126283 71126283 + Missense_Mutation SNP A T PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx TRAM1 23471 broad.mit.edu hg19 8 71496023 71496023 + Missense_Mutation SNP G A TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx XKR9 389668 CPCGene hg19 8 71646055 71646055 + Missense_Mutation SNP G A CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 XKR9 389668 broad.mit.edu hg19 8 71646088 71646088 + Missense_Mutation SNP T C TCGA-2A-A8W1-01 Unknown Somatic WXS Illumina GAIIx XKR9 389668 broad.mit.edu hg19 8 71646226 71646226 + Missense_Mutation SNP T A P06-4428-Tumor Unknown Somatic WXS Illumina GAIIx TRPA1 8989 broad.mit.edu hg19 8 72963064 72963064 + Missense_Mutation SNP G A TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx KCNB2 9312 broad.mit.edu hg19 8 73480145 73480145 + Missense_Mutation SNP C T TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx KCNB2 9312 CPCGene hg19 8 73848509 73848509 + Missense_Mutation SNP C T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 KCNB2 9312 CPCGene hg19 8 73848960 73848960 + Missense_Mutation SNP C A CPCG0205-F1 Unknown Somatic WXS Illumina HiSeq 2500 KCNB2 9312 broad.mit.edu hg19 8 73849007 73849007 + Missense_Mutation SNP G A TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx TCEB1 0 broad.mit.edu hg19 8 74868172 74868172 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx ZFHX4 79776 broad.mit.edu hg19 8 77617275 77617275 + Missense_Mutation SNP G A P08-501 Unknown Somatic WGS Illumina GAIIx ZFHX4 79776 CPCGene hg19 8 77618598 77618598 + Missense_Mutation SNP T C CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZFHX4 79776 broad.mit.edu hg19 8 77745596 77745596 + Missense_Mutation SNP G A PR-08-4154 Unknown Somatic WGS Illumina GAIIx ZFHX4 79776 CPCGene hg19 8 77754979 77754979 + Missense_Mutation SNP T A CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZFHX4 79776 broad.mit.edu hg19 8 77764257 77764257 + Missense_Mutation SNP C T TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx ZFHX4 79776 CPCGene hg19 8 77765301 77765301 + Missense_Mutation SNP T A CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZFHX4 79776 CPCGene hg19 8 77765301 77765301 + Missense_Mutation SNP T C CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZFHX4 79776 broad.mit.edu hg19 8 77766817 77766817 + Missense_Mutation SNP A T TCGA-G9-6354-01 Unknown Somatic WXS Illumina GAIIx IMPA1 3612 broad.mit.edu hg19 8 82572881 82572881 + Missense_Mutation SNP T C PR-05-3595 Unknown Somatic WGS Illumina GAIIx IMPA1 3612 broad.mit.edu hg19 8 82591382 82591382 + Missense_Mutation SNP C T TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx ZFAND1 79752 broad.mit.edu hg19 8 82626245 82626245 + Missense_Mutation SNP G A PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx CA2 760 CPCGene hg19 8 86389490 86389490 + Missense_Mutation SNP G A CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATP6V0D2 245972 broad.mit.edu hg19 8 87162457 87162457 + Missense_Mutation SNP G A PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx RMDN1 51115 CPCGene hg19 8 87498735 87498735 + Missense_Mutation SNP T G CPCG0412-F1 Unknown Somatic WXS Illumina HiSeq 2500 CPNE3 8895 broad.mit.edu hg19 8 87549807 87549807 + Missense_Mutation SNP C A TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx DCAF4L2 138009 broad.mit.edu hg19 8 88885073 88885073 + Missense_Mutation SNP C T TCGA-EJ-5530-01 Unknown Somatic WXS Illumina GAIIx DCAF4L2 138009 broad.mit.edu hg19 8 88885088 88885088 + Missense_Mutation SNP C T TCGA-EJ-7797-01 Unknown Somatic WXS Illumina GAIIx DCAF4L2 138009 broad.mit.edu hg19 8 88885128 88885128 + Missense_Mutation SNP C T TCGA-HC-7077-01 Unknown Somatic WXS Illumina GAIIx DCAF4L2 138009 broad.mit.edu hg19 8 88885974 88885974 + Missense_Mutation SNP G A PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx DCAF4L2 138009 broad.mit.edu hg19 8 88886040 88886040 + Missense_Mutation SNP T C TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx MMP16 4325 CPCGene hg19 8 89053734 89053734 + Missense_Mutation SNP G A CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 MMP16 4325 broad.mit.edu hg19 8 89068388 89068388 + Missense_Mutation SNP G A TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx MMP16 4325 broad.mit.edu hg19 8 89128891 89128891 + Missense_Mutation SNP G A P08-716 Unknown Somatic WGS Illumina GAIIx MMP16 4325 broad.mit.edu hg19 8 89209478 89209478 + Missense_Mutation SNP G A PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx FSBP 100861412 CPCGene hg19 8 95444615 95444615 + Missense_Mutation SNP T A CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIAA1429 25962 CPCGene hg19 8 95541403 95541403 + Missense_Mutation SNP C T CPCG0339-F1 Unknown Somatic WXS Illumina HiSeq 2500 ESRP1 54845 CPCGene hg19 8 95653641 95653641 + Missense_Mutation SNP T G CPCG0087-F1 Unknown Somatic WXS Illumina HiSeq 2500 DPY19L4 286148 broad.mit.edu hg19 8 95795914 95795914 + Missense_Mutation SNP G T TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx NDUFAF6 137682 broad.mit.edu hg19 8 96070121 96070121 + Missense_Mutation SNP C G TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx MTERF3 51001 CPCGene hg19 8 97251809 97251809 + Missense_Mutation SNP G T CPCG0357-F1 Unknown Somatic WXS Illumina HiSeq 2500 MTDH 92140 broad.mit.edu hg19 8 98657100 98657100 + Missense_Mutation SNP G A TCGA-J4-8198-01 Unknown Somatic WXS Illumina GAIIx VPS13B 157680 CPCGene hg19 8 100182265 100182265 + Splice_Site SNP A C CPCG0095-F1 Unknown Somatic WXS Illumina HiSeq 2500 VPS13B 157680 broad.mit.edu hg19 8 100789020 100789020 + Missense_Mutation SNP G C TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx SPAG1 6674 broad.mit.edu hg19 8 101199438 101199438 + Missense_Mutation SNP T G PR-07-4610 Unknown Somatic WGS Illumina GAIIx SPAG1 6674 broad.mit.edu hg19 8 101206436 101206436 + Missense_Mutation SNP A T TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx UBR5 51366 broad.mit.edu hg19 8 103274294 103274294 + Missense_Mutation SNP T G PR-04-3113-Tumor Unknown Somatic WXS Illumina GAIIx ODF1 4956 broad.mit.edu hg19 8 103573010 103573010 + Missense_Mutation SNP C G PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx KLF10 7071 CPCGene hg19 8 103662617 103662617 + Missense_Mutation SNP C A CPCG0256-F1 Unknown Somatic WXS Illumina HiSeq 2500 KLF10 7071 broad.mit.edu hg19 8 103663755 103663755 + Missense_Mutation SNP G A PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx AZIN1 51582 broad.mit.edu hg19 8 103852021 103852021 + Missense_Mutation SNP G A P08-1042 Unknown Somatic WGS Illumina GAIIx FZD6 8323 broad.mit.edu hg19 8 104330852 104330852 + Missense_Mutation SNP C T TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx FZD6 8323 broad.mit.edu hg19 8 104340556 104340556 + Missense_Mutation SNP A G TCGA-G9-6364-01 Unknown Somatic WXS Illumina GAIIx DCSTAMP 81501 CPCGene hg19 8 105361419 105361419 + Missense_Mutation SNP G C CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 DPYS 1807 CPCGene hg19 8 105459568 105459568 + Missense_Mutation SNP C T CPCG0360-F1 Unknown Somatic WXS Illumina HiSeq 2500 LRP12 29967 broad.mit.edu hg19 8 105509398 105509398 + Missense_Mutation SNP T C TCGA-YL-A8SH-01 Unknown Somatic WXS Illumina GAIIx ZFPM2 23414 broad.mit.edu hg19 8 106811063 106811063 + Missense_Mutation SNP C T TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx ZFPM2 23414 broad.mit.edu hg19 8 106813675 106813675 + Missense_Mutation SNP G A TCGA-EJ-7325-01 Unknown Somatic WXS Illumina GAIIx ZFPM2 23414 broad.mit.edu hg19 8 106814447 106814447 + Missense_Mutation SNP C T P09-37 Unknown Somatic WGS Illumina GAIIx ZFPM2 23414 CPCGene hg19 8 106815010 106815010 + Missense_Mutation SNP C T CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANGPT1 284 broad.mit.edu hg19 8 108334256 108334256 + Missense_Mutation SNP G C PR-04-1243 Unknown Somatic WGS Illumina GAIIx RSPO2 340419 broad.mit.edu hg19 8 109001362 109001362 + Missense_Mutation SNP G A TCGA-J4-A67S-01 Unknown Somatic WXS Illumina GAIIx EIF3E 3646 broad.mit.edu hg19 8 109240549 109240549 + Missense_Mutation SNP G A PR-03-3125 Unknown Somatic WGS Illumina GAIIx TMEM74 157753 CPCGene hg19 8 109796609 109796609 + Missense_Mutation SNP G A CPCG0121-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMEM74 157753 broad.mit.edu hg19 8 109797113 109797113 + Missense_Mutation SNP T C PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx TRHR 7201 broad.mit.edu hg19 8 110131538 110131538 + Missense_Mutation SNP G A PR-02-254-Tumor Unknown Somatic WXS Illumina GAIIx PKHD1L1 93035 broad.mit.edu hg19 8 110457746 110457746 + Missense_Mutation SNP G A TCGA-EJ-5504-01 Unknown Somatic WXS Illumina GAIIx EBAG9 9166 CPCGene hg19 8 110566146 110566146 + Missense_Mutation SNP G A CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 CSMD3 114788 broad.mit.edu hg19 8 113256714 113256714 + Missense_Mutation SNP G A TCGA-HC-A6AO-01 Unknown Somatic WXS Illumina GAIIx CSMD3 114788 broad.mit.edu hg19 8 113293531 113293531 + Missense_Mutation SNP C T P05-1657 Unknown Somatic WGS Illumina GAIIx CSMD3 114788 broad.mit.edu hg19 8 113317094 113317094 + Missense_Mutation SNP G A TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx CSMD3 114788 broad.mit.edu hg19 8 113358324 113358324 + Splice_Site SNP A G TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx CSMD3 114788 broad.mit.edu hg19 8 113529332 113529332 + Missense_Mutation SNP C T TCGA-G9-6332-01 Unknown Somatic WXS Illumina GAIIx CSMD3 114788 CPCGene hg19 8 113649184 113649184 + Missense_Mutation SNP G A CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 CSMD3 114788 CPCGene hg19 8 114290928 114290928 + Missense_Mutation SNP G A CPCG0211-F1 Unknown Somatic WXS Illumina HiSeq 2500 TRPS1 7227 broad.mit.edu hg19 8 116632180 116632180 + Missense_Mutation SNP C A TCGA-FC-A8O0-01 Unknown Somatic WXS Illumina GAIIx UTP23 84294 broad.mit.edu hg19 8 117783946 117783946 + Missense_Mutation SNP T A TCGA-EJ-8470-01 Unknown Somatic WXS Illumina GAIIx RAD21 5885 EMBL hg19 8 117875400 117875400 + Missense_Mutation SNP T C EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 COLEC10 10584 broad.mit.edu hg19 8 120114623 120114623 + Missense_Mutation SNP G T TCGA-HC-A6AQ-01 Unknown Somatic WXS Illumina GAIIx MTBP 27085 broad.mit.edu hg19 8 121519023 121519023 + Missense_Mutation SNP A T TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx ZHX2 22882 broad.mit.edu hg19 8 123964946 123964946 + Missense_Mutation SNP G T TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx ATAD2 29028 broad.mit.edu hg19 8 124346443 124346443 + Missense_Mutation SNP T G P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx KLHL38 340359 broad.mit.edu hg19 8 124664369 124664369 + Missense_Mutation SNP G A P03-2620-Tumor Unknown Somatic WXS Illumina GAIIx KLHL38 340359 broad.mit.edu hg19 8 124664598 124664598 + Missense_Mutation SNP C A PR-08-2153 Unknown Somatic WGS Illumina GAIIx TMEM65 157378 EMBL hg19 8 125339640 125339640 + Missense_Mutation SNP A C EOPC-10 Unknown Somatic WGS Illumina HiSeq2000 TATDN1 83940 broad.mit.edu hg19 8 125535240 125535240 + Missense_Mutation SNP A G TCGA-J4-A67O-01 Unknown Somatic WXS Illumina GAIIx ZNF572 137209 broad.mit.edu hg19 8 125989773 125989773 + Missense_Mutation SNP C T TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx SQLE 6713 CPCGene hg19 8 126021283 126021283 + Missense_Mutation SNP A G CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 POU5F1B 5462 broad.mit.edu hg19 8 128428759 128428759 + Missense_Mutation SNP T C PR-03-3125 Unknown Somatic WGS Illumina GAIIx POU5F1B 5462 broad.mit.edu hg19 8 128428780 128428780 + Missense_Mutation SNP A C TCGA-CH-5788-01 Unknown Somatic WGS Illumina GAIIx ASAP1 50807 CPCGene hg19 8 131179842 131179842 + Missense_Mutation SNP C G CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 ASAP1 50807 CPCGene hg19 8 131181277 131181277 + Missense_Mutation SNP C G CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADCY8 114 broad.mit.edu hg19 8 131848633 131848633 + Missense_Mutation SNP G A TCGA-G9-6377-01 Unknown Somatic WXS Illumina GAIIx ADCY8 114 broad.mit.edu hg19 8 131859738 131859738 + Missense_Mutation SNP A T TCGA-HC-8256-01 Unknown Somatic WXS Illumina GAIIx OC90 729330 broad.mit.edu hg19 8 133053851 133053851 + Missense_Mutation SNP G C TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx OC90 729330 CPCGene hg19 8 133053915 133053915 + Missense_Mutation SNP C T CPCG0208-F1 Unknown Somatic WXS Illumina HiSeq 2500 HHLA1 10086 broad.mit.edu hg19 8 133083711 133083711 + Missense_Mutation SNP C T P07-144 Unknown Somatic WGS Illumina GAIIx KCNQ3 3786 CPCGene hg19 8 133153566 133153566 + Missense_Mutation SNP A G CPCG0371-F1 Unknown Somatic WXS Illumina HiSeq 2500 KCNQ3 3786 broad.mit.edu hg19 8 133192474 133192474 + Missense_Mutation SNP C T PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx KCNQ3 3786 broad.mit.edu hg19 8 133196585 133196585 + Missense_Mutation SNP G A TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx TG 7038 broad.mit.edu hg19 8 134042167 134042167 + Missense_Mutation SNP G A P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx WISP1 8840 broad.mit.edu hg19 8 134237731 134237731 + Missense_Mutation SNP C A PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx ZFAT 57623 broad.mit.edu hg19 8 135612780 135612780 + Missense_Mutation SNP T G TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx ZFAT 57623 broad.mit.edu hg19 8 135614923 135614923 + Missense_Mutation SNP G A TCGA-VP-A87J-01 Unknown Somatic WXS Illumina GAIIx ZFAT 57623 CPCGene hg19 8 135669926 135669926 + Missense_Mutation SNP G T CPCG0360-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAM135B 51059 broad.mit.edu hg19 8 139151288 139151288 + Missense_Mutation SNP G T PR-02-254-Tumor Unknown Somatic WXS Illumina GAIIx FAM135B 51059 CPCGene hg19 8 139165434 139165434 + Missense_Mutation SNP A T CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAM135B 51059 broad.mit.edu hg19 8 139180230 139180230 + Missense_Mutation SNP G A TCGA-G9-6333-01 Unknown Somatic WXS Illumina GAIIx FAM135B 51059 broad.mit.edu hg19 8 139209802 139209802 + Missense_Mutation SNP C T TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx COL22A1 169044 broad.mit.edu hg19 8 139662012 139662012 + Missense_Mutation SNP T C TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx COL22A1 169044 CPCGene hg19 8 139691907 139691907 + Missense_Mutation SNP T G CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 COL22A1 169044 broad.mit.edu hg19 8 139833397 139833397 + Missense_Mutation SNP G A TCGA-EJ-7312-01 Unknown Somatic WXS Illumina GAIIx COL22A1 169044 CPCGene hg19 8 139833557 139833557 + Missense_Mutation SNP A G CPCG0341-F1 Unknown Somatic WXS Illumina HiSeq 2500 KCNK9 51305 CPCGene hg19 8 140630518 140630518 + Missense_Mutation SNP G A CPCG0123-F1 Unknown Somatic WXS Illumina HiSeq 2500 KCNK9 51305 broad.mit.edu hg19 8 140715136 140715136 + Missense_Mutation SNP C T TCGA-HC-A6AN-01 Unknown Somatic WXS Illumina GAIIx DENND3 22898 broad.mit.edu hg19 8 142178473 142178473 + Missense_Mutation SNP G A TCGA-G9-6366-01 Unknown Somatic WXS Illumina GAIIx SLC45A4 57210 broad.mit.edu hg19 8 142222492 142222492 + Missense_Mutation SNP C T TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx GPR20 2843 CPCGene hg19 8 142367480 142367480 + Missense_Mutation SNP T G CPCG0344-F1 Unknown Somatic WXS Illumina HiSeq 2500 BAI1 0 broad.mit.edu hg19 8 143603449 143603449 + Missense_Mutation SNP C T TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx ARC 23237 broad.mit.edu hg19 8 143694473 143694473 + Missense_Mutation SNP G A TCGA-HC-8216-01 Unknown Somatic WXS Illumina GAIIx CYP11B1 1584 broad.mit.edu hg19 8 143957235 143957235 + Missense_Mutation SNP C T P02-2035-Tumor Unknown Somatic WXS Illumina GAIIx ZFP41 286128 broad.mit.edu hg19 8 144332544 144332544 + Missense_Mutation SNP G A PR-0508 Unknown Somatic WGS Illumina GAIIx ZNF696 79943 broad.mit.edu hg19 8 144378755 144378755 + Missense_Mutation SNP C T P07-837 Unknown Somatic WGS Illumina GAIIx CCDC166 100130274 broad.mit.edu hg19 8 144790269 144790269 + Missense_Mutation SNP T C P09-628 Unknown Somatic WGS Illumina GAIIx EPPK1 83481 broad.mit.edu hg19 8 144940653 144940653 + Missense_Mutation SNP C T PR-3035-Tumor Unknown Somatic WXS Illumina GAIIx EPPK1 83481 CPCGene hg19 8 144945571 144945571 + Missense_Mutation SNP G A CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 PLEC 5339 broad.mit.edu hg19 8 144998994 144998994 + Missense_Mutation SNP C T TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx PLEC 5339 CPCGene hg19 8 144999163 144999163 + Missense_Mutation SNP C T CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 OPLAH 26873 broad.mit.edu hg19 8 145109715 145109715 + Missense_Mutation SNP C T TCGA-EJ-A65M-01 Unknown Somatic WXS Illumina GAIIx EXOSC4 54512 broad.mit.edu hg19 8 145135356 145135356 + Missense_Mutation SNP C A TCGA-EJ-5516-01 Unknown Somatic WXS Illumina GAIIx CYC1 1537 CPCGene hg19 8 145151356 145151356 + Missense_Mutation SNP C T CPCG0412-F1 Unknown Somatic WXS Illumina HiSeq 2500 HSF1 3297 broad.mit.edu hg19 8 145535738 145535738 + Missense_Mutation SNP G A TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx FBXL6 26233 broad.mit.edu hg19 8 145581791 145581791 + Missense_Mutation SNP C G P09-628 Unknown Somatic WGS Illumina GAIIx TONSL 4796 CPCGene hg19 8 145662208 145662208 + Missense_Mutation SNP A C CPCG0201-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPT 2875 CPCGene hg19 8 145731789 145731789 + Missense_Mutation SNP T A CPCG0217-F1 Unknown Somatic WXS Illumina HiSeq 2500 C9 735 broad.mit.edu hg19 9 214908 214908 + Missense_Mutation SNP T C PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx DOCK8 81704 broad.mit.edu hg19 9 286593 286593 + Missense_Mutation SNP C A PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx DOCK8 81704 CPCGene hg19 9 399253 399253 + Missense_Mutation SNP C A CPCG0098-F1 Unknown Somatic WXS Illumina HiSeq 2500 DMRT1 1761 CPCGene hg19 9 968015 968015 + Missense_Mutation SNP G A CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 DMRT3 58524 broad.mit.edu hg19 9 990840 990840 + Missense_Mutation SNP C T PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx VLDLR 7436 broad.mit.edu hg19 9 2648773 2648773 + Missense_Mutation SNP A G PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx KCNV2 169522 CPCGene hg19 9 2718784 2718784 + Missense_Mutation SNP C T CPCG0265-F1 Unknown Somatic WXS Illumina HiSeq 2500 RFX3 5991 CPCGene hg19 9 3248178 3248178 + Missense_Mutation SNP C T CPCG0407-F1 Unknown Somatic WXS Illumina HiSeq 2500 GLIS3 169792 broad.mit.edu hg19 9 4118111 4118111 + Missense_Mutation SNP G T PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx JAK2 3717 broad.mit.edu hg19 9 5069969 5069969 + Missense_Mutation SNP G A P08-716 Unknown Somatic WGS Illumina GAIIx JAK2 3717 broad.mit.edu hg19 9 5123118 5123118 + Missense_Mutation SNP A G P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx INSL4 3641 broad.mit.edu hg19 9 5231712 5231712 + Missense_Mutation SNP T A PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx RANBP6 26953 broad.mit.edu hg19 9 6012901 6012901 + Missense_Mutation SNP A C P00-000450-Tumor Unknown Somatic WXS Illumina GAIIx RANBP6 26953 broad.mit.edu hg19 9 6014612 6014612 + Missense_Mutation SNP A C P07-684-Tumor Unknown Somatic WXS Illumina GAIIx UHRF2 115426 broad.mit.edu hg19 9 6504676 6504676 + Missense_Mutation SNP C T TCGA-QU-A6IN-01 Unknown Somatic WXS Illumina GAIIx GLDC 2731 broad.mit.edu hg19 9 6540103 6540103 + Missense_Mutation SNP T G TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx KDM4C 23081 broad.mit.edu hg19 9 7103816 7103816 + Missense_Mutation SNP C T PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx TMEM261 90871 broad.mit.edu hg19 9 7799606 7799606 + Missense_Mutation SNP C A PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx TMEM261 90871 broad.mit.edu hg19 9 7799653 7799653 + Missense_Mutation SNP G T PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx PTPRD 5789 broad.mit.edu hg19 9 8389278 8389278 + Missense_Mutation SNP C T TCGA-2A-A8VV-01 Unknown Somatic WXS Illumina GAIIx PTPRD 5789 broad.mit.edu hg19 9 8485768 8485768 + Missense_Mutation SNP C G TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx PTPRD 5789 CPCGene hg19 9 8486143 8486143 + Missense_Mutation SNP C T CPCG0410-F1 Unknown Somatic WXS Illumina HiSeq 2500 PTPRD 5789 CPCGene hg19 9 8528674 8528674 + Missense_Mutation SNP G A CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 CNTLN 54875 broad.mit.edu hg19 9 17273768 17273768 + Missense_Mutation SNP T C TCGA-G9-6333-01 Unknown Somatic WXS Illumina GAIIx CNTLN 54875 broad.mit.edu hg19 9 17484329 17484329 + Missense_Mutation SNP G T PR-02-2072-Tumor Unknown Somatic WXS Illumina GAIIx ADAMTSL1 92949 broad.mit.edu hg19 9 18639300 18639300 + Missense_Mutation SNP G A PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx FAM154A 0 broad.mit.edu hg19 9 18928742 18928742 + Missense_Mutation SNP G A TCGA-EJ-5508-01 Unknown Somatic WXS Illumina GAIIx FAM154A 0 broad.mit.edu hg19 9 18950895 18950895 + Missense_Mutation SNP T C PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx HAUS6 54801 broad.mit.edu hg19 9 19063517 19063517 + Missense_Mutation SNP C T P08-716 Unknown Somatic WGS Illumina GAIIx MLLT3 4300 broad.mit.edu hg19 9 20448194 20448194 + Missense_Mutation SNP T C TCGA-EJ-7792-01 Unknown Somatic WXS Illumina GAIIx FOCAD 54914 broad.mit.edu hg19 9 20978420 20978420 + Missense_Mutation SNP G C TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx IFNB1 3456 broad.mit.edu hg19 9 21077716 21077716 + Missense_Mutation SNP G A PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx IFNA7 3444 CPCGene hg19 9 21202067 21202067 + Missense_Mutation SNP C T CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 IFNA16 3449 broad.mit.edu hg19 9 21217022 21217022 + Missense_Mutation SNP C G PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx KLHL9 55958 broad.mit.edu hg19 9 21333254 21333254 + Missense_Mutation SNP T C PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx MTAP 4507 broad.mit.edu hg19 9 21816758 21816758 + Missense_Mutation SNP G A PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx MTAP 4507 broad.mit.edu hg19 9 21854677 21854677 + Missense_Mutation SNP G A TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx IZUMO3 100129669 CPCGene hg19 9 24545497 24545497 + Missense_Mutation SNP G A CPCG0246-F1 Unknown Somatic WXS Illumina HiSeq 2500 PLAA 9373 broad.mit.edu hg19 9 26905927 26905927 + Missense_Mutation SNP A G TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx TEK 7010 broad.mit.edu hg19 9 27202870 27202870 + Missense_Mutation SNP A G PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx C9 735 broad.mit.edu hg19 9 27556780 27556780 + Missense_Mutation SNP G A PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx LINGO2 158038 CPCGene hg19 9 27949432 27949432 + Missense_Mutation SNP C T CPCG0374-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMEM215 401498 broad.mit.edu hg19 9 32784382 32784382 + Missense_Mutation SNP C T PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx TMEM215 401498 broad.mit.edu hg19 9 32784838 32784838 + Missense_Mutation SNP T C PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx APTX 54840 broad.mit.edu hg19 9 32984646 32984646 + Missense_Mutation SNP G A P03-2345 Unknown Somatic WGS Illumina GAIIx B4GALT1 2683 broad.mit.edu hg19 9 33135276 33135276 + Missense_Mutation SNP G A TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx NFX1 4799 broad.mit.edu hg19 9 33347117 33347117 + Splice_Site SNP T A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx NOL6 65083 broad.mit.edu hg19 9 33466087 33466087 + Missense_Mutation SNP C T PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx NOL6 65083 CPCGene hg19 9 33466402 33466402 + Missense_Mutation SNP G A CPCG0336-F1 Unknown Somatic WXS Illumina HiSeq 2500 ANKRD18B 441459 broad.mit.edu hg19 9 33572323 33572323 + Missense_Mutation SNP C T TCGA-EJ-5501-01 Unknown Somatic WXS Illumina GAIIx UBAP2 55833 broad.mit.edu hg19 9 33941759 33941759 + Missense_Mutation SNP T C PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx UBAP2 55833 broad.mit.edu hg19 9 33943522 33943522 + Missense_Mutation SNP C A TCGA-VP-A87J-01 Unknown Somatic WXS Illumina GAIIx UBAP2 55833 broad.mit.edu hg19 9 34017106 34017106 + Missense_Mutation SNP C T PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx DCAF12 25853 broad.mit.edu hg19 9 34107504 34107504 + Missense_Mutation SNP C T PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx KIF24 347240 broad.mit.edu hg19 9 34306410 34306410 + Missense_Mutation SNP C A PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx C9 735 broad.mit.edu hg19 9 34397545 34397545 + Missense_Mutation SNP A G PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx SIGMAR1 10280 CPCGene hg19 9 34637089 34637089 + Missense_Mutation SNP G A CPCG0341-F1 Unknown Somatic WXS Illumina HiSeq 2500 DNAJB5 25822 broad.mit.edu hg19 9 34996540 34996540 + Missense_Mutation SNP C T PR-2915-Tumor Unknown Somatic WXS Illumina GAIIx DNAJB5 25822 broad.mit.edu hg19 9 34997172 34997172 + Missense_Mutation SNP C T TCGA-EJ-7327-01 Unknown Somatic WXS Illumina GAIIx C9 735 broad.mit.edu hg19 9 35043291 35043291 + Missense_Mutation SNP G T PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx VCP 7415 broad.mit.edu hg19 9 35067943 35067943 + Missense_Mutation SNP G A P08-5852 Unknown Somatic WGS Illumina GAIIx PIGO 84720 broad.mit.edu hg19 9 35093455 35093455 + Missense_Mutation SNP T C TCGA-J4-A67M-01 Unknown Somatic WXS Illumina GAIIx FAM214B 80256 broad.mit.edu hg19 9 35107765 35107765 + Missense_Mutation SNP C A PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx UNC13B 10497 broad.mit.edu hg19 9 35403913 35403913 + Missense_Mutation SNP T C PR-3035-Tumor Unknown Somatic WXS Illumina GAIIx TESK1 7016 broad.mit.edu hg19 9 35605732 35605732 + Missense_Mutation SNP C T PR-04-903-Tumor Unknown Somatic WXS Illumina GAIIx TESK1 7016 broad.mit.edu hg19 9 35606884 35606884 + Missense_Mutation SNP G A PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx TLN1 7094 broad.mit.edu hg19 9 35717276 35717276 + Missense_Mutation SNP G C PR-09-3687-Tumor Unknown Somatic WXS Illumina GAIIx NPR2 4882 broad.mit.edu hg19 9 35792444 35792444 + Missense_Mutation SNP G A PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx OR13J1 392309 broad.mit.edu hg19 9 35870001 35870001 + Missense_Mutation SNP T C PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx HRCT1 646962 broad.mit.edu hg19 9 35906519 35906519 + Missense_Mutation SNP G A PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx RECK 8434 broad.mit.edu hg19 9 36110063 36110063 + Missense_Mutation SNP T A PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx CCIN 881 broad.mit.edu hg19 9 36169598 36169598 + Missense_Mutation SNP T C PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx PAX5 5079 broad.mit.edu hg19 9 36923352 36923352 + Missense_Mutation SNP C A TCGA-EJ-5496-01 Unknown Somatic WXS Illumina GAIIx ZBTB5 9925 broad.mit.edu hg19 9 37441579 37441579 + Missense_Mutation SNP G T PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx FBXO10 26267 broad.mit.edu hg19 9 37521630 37521630 + Missense_Mutation SNP G A P09-2497-Tumor Unknown Somatic WXS Illumina GAIIx FRMPD1 22844 broad.mit.edu hg19 9 37740871 37740871 + Missense_Mutation SNP C G TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx FRMPD1 22844 broad.mit.edu hg19 9 37744831 37744831 + Missense_Mutation SNP C T PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx FRMPD1 22844 broad.mit.edu hg19 9 37745413 37745413 + Missense_Mutation SNP G A PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx FRMPD1 22844 CPCGene hg19 9 37745690 37745690 + Missense_Mutation SNP G A CPCG0265-F1 Unknown Somatic WXS Illumina HiSeq 2500 SHB 6461 broad.mit.edu hg19 9 37974743 37974743 + Missense_Mutation SNP T C PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx SHB 6461 broad.mit.edu hg19 9 38067978 38067978 + Missense_Mutation SNP T C P09-1580-Tumor Unknown Somatic WXS Illumina GAIIx ALDH1B1 219 broad.mit.edu hg19 9 38396002 38396002 + Missense_Mutation SNP C T PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx ANKRD18A 253650 broad.mit.edu hg19 9 38615698 38615698 + Missense_Mutation SNP C T PR-1043-Tumor Unknown Somatic WXS Illumina GAIIx SPATA31A6 389730 broad.mit.edu hg19 9 43627263 43627263 + Missense_Mutation SNP C T TCGA-J4-A67N-01 Unknown Somatic WXS Illumina GAIIx PRKACG 5568 broad.mit.edu hg19 9 71628564 71628564 + Missense_Mutation SNP C T PR-03-3125 Unknown Somatic WGS Illumina GAIIx TJP2 9414 broad.mit.edu hg19 9 71841089 71841089 + Missense_Mutation SNP A G TCGA-EJ-5504-01 Unknown Somatic WXS Illumina GAIIx APBA1 320 broad.mit.edu hg19 9 72131395 72131395 + Missense_Mutation SNP G A TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx APBA1 320 broad.mit.edu hg19 9 72131722 72131722 + Missense_Mutation SNP G A TCGA-G9-6373-01 Unknown Somatic WXS Illumina GAIIx APBA1 320 broad.mit.edu hg19 9 72131803 72131803 + Missense_Mutation SNP G A P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx TRPM3 80036 broad.mit.edu hg19 9 73235142 73235142 + Missense_Mutation SNP C T P06-1125-Tumor Unknown Somatic WXS Illumina GAIIx TMEM2 23670 broad.mit.edu hg19 9 74332878 74332878 + Missense_Mutation SNP G A P05-620 Unknown Somatic WGS Illumina GAIIx TMEM2 23670 CPCGene hg19 9 74365120 74365120 + Missense_Mutation SNP C T CPCG0260-F1 Unknown Somatic WXS Illumina HiSeq 2500 TRPM6 140803 broad.mit.edu hg19 9 77377204 77377204 + Missense_Mutation SNP A C TCGA-G9-6377-01 Unknown Somatic WXS Illumina GAIIx TRPM6 140803 broad.mit.edu hg19 9 77427337 77427337 + Missense_Mutation SNP C T TCGA-CH-5744-01 Unknown Somatic WXS Illumina GAIIx PRUNE2 158471 CPCGene hg19 9 79465513 79465513 + Missense_Mutation SNP G A CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 GNA14 9630 broad.mit.edu hg19 9 80144050 80144050 + Missense_Mutation SNP C T PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx SPATA31D1 389763 broad.mit.edu hg19 9 84603809 84603809 + Missense_Mutation SNP G A P03-871-Tumor Unknown Somatic WXS Illumina GAIIx RASEF 158158 broad.mit.edu hg19 9 85597623 85597623 + Missense_Mutation SNP G A TCGA-G9-6336-01 Unknown Somatic WGS Illumina GAIIx KIF27 55582 CPCGene hg19 9 86504069 86504069 + Missense_Mutation SNP C A CPCG0364-F1 Unknown Somatic WXS Illumina HiSeq 2500 NTRK2 4915 broad.mit.edu hg19 9 87636257 87636257 + Missense_Mutation SNP C T P07-144 Unknown Somatic WGS Illumina GAIIx DAPK1 1612 broad.mit.edu hg19 9 90256949 90256949 + Missense_Mutation SNP G A PR-01-2492-Tumor Unknown Somatic WXS Illumina GAIIx DAPK1 1612 broad.mit.edu hg19 9 90261436 90261436 + Missense_Mutation SNP C G TCGA-EJ-7781-01 Unknown Somatic WXS Illumina GAIIx CTSL 1514 broad.mit.edu hg19 9 90343057 90343057 + Missense_Mutation SNP G A P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx SPATA31E1 286234 broad.mit.edu hg19 9 90503673 90503673 + Missense_Mutation SNP G A PR-00-1823-Tumor Unknown Somatic WXS Illumina GAIIx SPATA31C1 441452 broad.mit.edu hg19 9 90536465 90536465 + Missense_Mutation SNP C T TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx SPATA31C1 441452 CPCGene hg19 9 90536620 90536620 + Missense_Mutation SNP G A CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 NXNL2 158046 CPCGene hg19 9 91159369 91159369 + Missense_Mutation SNP C G CPCG0001-F1 Unknown Somatic WXS Illumina HiSeq 2500 SHC3 53358 CPCGene hg19 9 91686162 91686162 + Missense_Mutation SNP T A CPCG0263-F1 Unknown Somatic WXS Illumina HiSeq 2500 SYK 6850 CPCGene hg19 9 93606482 93606482 + Missense_Mutation SNP G T CPCG0047-F1 Unknown Somatic WXS Illumina HiSeq 2500 ROR2 4920 CPCGene hg19 9 94486694 94486694 + Missense_Mutation SNP G A CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 ROR2 4920 broad.mit.edu hg19 9 94486842 94486842 + Missense_Mutation SNP T C TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx IARS 3376 broad.mit.edu hg19 9 95013001 95013001 + Missense_Mutation SNP C T PR-08-4154 Unknown Somatic WGS Illumina GAIIx IARS 3376 broad.mit.edu hg19 9 95043126 95043126 + Missense_Mutation SNP T C TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx CENPP 401541 broad.mit.edu hg19 9 95375385 95375385 + Missense_Mutation SNP C T TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx BICD2 23299 broad.mit.edu hg19 9 95477650 95477650 + Missense_Mutation SNP G C TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx ZNF169 169841 broad.mit.edu hg19 9 97055284 97055284 + Missense_Mutation SNP C T PR-2858-Tumor Unknown Somatic WXS Illumina GAIIx NUTM2F 54754 broad.mit.edu hg19 9 97084488 97084488 + Missense_Mutation SNP C T P07-144 Unknown Somatic WGS Illumina GAIIx C9 735 broad.mit.edu hg19 9 97843033 97843033 + Missense_Mutation SNP A G TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx CTSV 1515 broad.mit.edu hg19 9 99795261 99795261 + Missense_Mutation SNP G A PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx CCDC180 100499483 broad.mit.edu hg19 9 100070049 100070049 + Missense_Mutation SNP G A PR-09-5446-Tumor Unknown Somatic WXS Illumina GAIIx TDRD7 23424 CPCGene hg19 9 100190881 100190881 + Missense_Mutation SNP G A CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 TSTD2 158427 broad.mit.edu hg19 9 100388075 100388075 + Missense_Mutation SNP T C TCGA-HC-7744-01 Unknown Somatic WGS Illumina GAIIx XPA 7507 broad.mit.edu hg19 9 100447271 100447271 + Missense_Mutation SNP C A PR-2525 Unknown Somatic WGS Illumina GAIIx C9 735 broad.mit.edu hg19 9 100675695 100675695 + Missense_Mutation SNP C T TCGA-J4-A67K-01 Unknown Somatic WXS Illumina GAIIx TBC1D2 55357 CPCGene hg19 9 100971349 100971349 + Missense_Mutation SNP G A CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 GABBR2 9568 broad.mit.edu hg19 9 101052989 101052989 + Missense_Mutation SNP G T PR-3042 Unknown Somatic WGS Illumina GAIIx GALNT12 79695 CPCGene hg19 9 101585579 101585579 + Missense_Mutation SNP C A CPCG0210-F1 Unknown Somatic WXS Illumina HiSeq 2500 COL15A1 1306 broad.mit.edu hg19 9 101785643 101785643 + Missense_Mutation SNP G T TCGA-EJ-7125-01 Unknown Somatic WXS Illumina GAIIx TGFBR1 7046 broad.mit.edu hg19 9 101900330 101900330 + Missense_Mutation SNP G T TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx NR4A3 8013 CPCGene hg19 9 102595570 102595570 + Missense_Mutation SNP G A CPCG0380-F1 Unknown Somatic WXS Illumina HiSeq 2500 ALDOB 229 broad.mit.edu hg19 9 104192139 104192139 + Missense_Mutation SNP G A TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx TMEM246 84302 broad.mit.edu hg19 9 104238562 104238562 + Missense_Mutation SNP C A TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx TMEM246 84302 broad.mit.edu hg19 9 104239189 104239189 + Missense_Mutation SNP G T TCGA-EJ-5510-01 Unknown Somatic WXS Illumina GAIIx RNF20 56254 broad.mit.edu hg19 9 104314097 104314097 + Missense_Mutation SNP A G TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx RNF20 56254 broad.mit.edu hg19 9 104323144 104323144 + Missense_Mutation SNP A G PR-3023-Tumor Unknown Somatic WXS Illumina GAIIx PPP3R2 5535 broad.mit.edu hg19 9 104357147 104357147 + Missense_Mutation SNP T A P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx SMC2 10592 broad.mit.edu hg19 9 106889711 106889711 + Missense_Mutation SNP G A TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx TAL2 6887 broad.mit.edu hg19 9 108424812 108424812 + Missense_Mutation SNP G C TCGA-EJ-5521-01 Unknown Somatic WXS Illumina GAIIx ZNF462 58499 broad.mit.edu hg19 9 109691723 109691723 + Missense_Mutation SNP C G TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx ACTL7B 10880 broad.mit.edu hg19 9 111617150 111617150 + Missense_Mutation SNP C T TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx CTNNAL1 8727 broad.mit.edu hg19 9 111714527 111714527 + Missense_Mutation SNP G C TCGA-Y6-A8TL-01 Unknown Somatic WXS Illumina GAIIx CTNNAL1 8727 broad.mit.edu hg19 9 111735029 111735029 + Missense_Mutation SNP C T TCGA-EJ-5501-01 Unknown Somatic WXS Illumina GAIIx CTNNAL1 8727 broad.mit.edu hg19 9 111761374 111761374 + Missense_Mutation SNP T C TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx EPB41L4B 54566 broad.mit.edu hg19 9 111936860 111936860 + Missense_Mutation SNP T G PR-STID0000002872 Unknown Somatic WGS Illumina GAIIx PTPN3 5774 broad.mit.edu hg19 9 112168821 112168821 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx PTPN3 5774 broad.mit.edu hg19 9 112185102 112185102 + Missense_Mutation SNP C T TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx TXNDC8 255220 broad.mit.edu hg19 9 113096558 113096558 + Missense_Mutation SNP C T PR-3035-Tumor Unknown Somatic WXS Illumina GAIIx SVEP1 79987 broad.mit.edu hg19 9 113220821 113220821 + Missense_Mutation SNP G A PR-0427-Tumor Unknown Somatic WXS Illumina GAIIx SVEP1 79987 CPCGene hg19 9 113251940 113251940 + Missense_Mutation SNP G C CPCG0050-F1 Unknown Somatic WXS Illumina HiSeq 2500 LPAR1 1902 broad.mit.edu hg19 9 113703743 113703743 + Missense_Mutation SNP C T TCGA-EJ-5497-01 Unknown Somatic WXS Illumina GAIIx OR2K2 26248 CPCGene hg19 9 114090279 114090279 + Missense_Mutation SNP A G CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIAA0368 23392 broad.mit.edu hg19 9 114145501 114145501 + Missense_Mutation SNP G A PR-04-1243 Unknown Somatic WGS Illumina GAIIx KIAA0368 23392 broad.mit.edu hg19 9 114170878 114170878 + Missense_Mutation SNP G T TCGA-J4-A67L-01 Unknown Somatic WXS Illumina GAIIx C9 735 broad.mit.edu hg19 9 114468873 114468873 + Missense_Mutation SNP C A TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx KIAA1958 158405 CPCGene hg19 9 115380217 115380217 + Missense_Mutation SNP C G CPCG0048-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZFP37 7539 broad.mit.edu hg19 9 115805634 115805634 + Missense_Mutation SNP C T TCGA-J4-A67L-01 Unknown Somatic WXS Illumina GAIIx FKBP15 23307 broad.mit.edu hg19 9 115962194 115962194 + Missense_Mutation SNP G C TCGA-EJ-8470-01 Unknown Somatic WXS Illumina GAIIx SLC31A1 1317 broad.mit.edu hg19 9 116021136 116021136 + Missense_Mutation SNP C G PR-09-3566-Tumor Unknown Somatic WXS Illumina GAIIx BSPRY 54836 CPCGene hg19 9 116132294 116132294 + Missense_Mutation SNP C A CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 ALAD 210 CPCGene hg19 9 116153179 116153179 + Missense_Mutation SNP G A CPCG0087-F1 Unknown Somatic WXS Illumina HiSeq 2500 RGS3 5998 broad.mit.edu hg19 9 116259663 116259663 + Missense_Mutation SNP C T PR-3051-Tumor Unknown Somatic WXS Illumina GAIIx KIF12 113220 broad.mit.edu hg19 9 116858374 116858374 + Missense_Mutation SNP C A TCGA-CH-5750-01 Unknown Somatic WGS Illumina GAIIx COL27A1 85301 broad.mit.edu hg19 9 116931682 116931682 + Missense_Mutation SNP G A P05-620 Unknown Somatic WGS Illumina GAIIx COL27A1 85301 broad.mit.edu hg19 9 116968050 116968050 + Missense_Mutation SNP A G TCGA-EJ-7321-01 Unknown Somatic WXS Illumina GAIIx AKNA 80709 broad.mit.edu hg19 9 117104291 117104291 + Missense_Mutation SNP G A TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx TNC 3371 broad.mit.edu hg19 9 117791699 117791699 + Missense_Mutation SNP A T PR-3042 Unknown Somatic WGS Illumina GAIIx TNC 3371 CPCGene hg19 9 117844150 117844150 + Missense_Mutation SNP G T CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 BRINP1 1620 CPCGene hg19 9 121929892 121929892 + Missense_Mutation SNP G A CPCG0378-F1 Unknown Somatic WXS Illumina HiSeq 2500 BRINP1 1620 broad.mit.edu hg19 9 121930373 121930373 + Missense_Mutation SNP G A TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx CNTRL 11064 broad.mit.edu hg19 9 123929841 123929841 + Missense_Mutation SNP A G P05-3436-Tumor Unknown Somatic WXS Illumina GAIIx DAB2IP 153090 broad.mit.edu hg19 9 124440981 124440981 + Missense_Mutation SNP C A TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx RC3H2 54542 broad.mit.edu hg19 9 125627866 125627866 + Missense_Mutation SNP T C PR-01-1934-Tumor Unknown Somatic WXS Illumina GAIIx CRB2 286204 CPCGene hg19 9 126128282 126128282 + Missense_Mutation SNP C A CPCG0189-F1 Unknown Somatic WXS Illumina HiSeq 2500 DENND1A 57706 broad.mit.edu hg19 9 126345510 126345510 + Missense_Mutation SNP T G PR-05-839-Tumor Unknown Somatic WXS Illumina GAIIx DENND1A 57706 CPCGene hg19 9 126520058 126520058 + Missense_Mutation SNP T C CPCG0342-F1 Unknown Somatic WXS Illumina HiSeq 2500 LHX2 9355 broad.mit.edu hg19 9 126777422 126777422 + Missense_Mutation SNP C T PR-00-1823-Tumor Unknown Somatic WXS Illumina GAIIx NEK6 10783 CPCGene hg19 9 127110008 127110008 + Missense_Mutation SNP C T CPCG0166-F1 Unknown Somatic WXS Illumina HiSeq 2500 GOLGA1 2800 CPCGene hg19 9 127651513 127651513 + Missense_Mutation SNP G A CPCG0372-F1 Unknown Somatic WXS Illumina HiSeq 2500 HSPA5 3309 CPCGene hg19 9 128000549 128000549 + Missense_Mutation SNP C T CPCG0001-F1 Unknown Somatic WXS Illumina HiSeq 2500 GAPVD1 26130 broad.mit.edu hg19 9 128094301 128094301 + Missense_Mutation SNP G C P07-684-Tumor Unknown Somatic WXS Illumina GAIIx MAPKAP1 79109 broad.mit.edu hg19 9 128321994 128321994 + Missense_Mutation SNP T G TCGA-HC-7736-01 Unknown Somatic WXS Illumina GAIIx ANGPTL2 23452 broad.mit.edu hg19 9 129870588 129870588 + Missense_Mutation SNP G T TCGA-VN-A88P-01 Unknown Somatic WXS Illumina GAIIx ANGPTL2 23452 CPCGene hg19 9 129870993 129870993 + Missense_Mutation SNP C T CPCG0404-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC2A8 29988 broad.mit.edu hg19 9 130167187 130167187 + Missense_Mutation SNP C T TCGA-FC-A6HD-01 Unknown Somatic WXS Illumina GAIIx ZNF79 7633 broad.mit.edu hg19 9 130191138 130191138 + Missense_Mutation SNP C T TCGA-HC-7212-01 Unknown Somatic WXS Illumina GAIIx RPL12 6136 broad.mit.edu hg19 9 130210640 130210640 + Missense_Mutation SNP G A PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx FAM129B 64855 broad.mit.edu hg19 9 130286023 130286023 + Missense_Mutation SNP A G TCGA-J4-A67L-01 Unknown Somatic WXS Illumina GAIIx PTRH1 138428 broad.mit.edu hg19 9 130477855 130477855 + Missense_Mutation SNP A G TCGA-QU-A6IO-01 Unknown Somatic WXS Illumina GAIIx TOR2A 27433 broad.mit.edu hg19 9 130496696 130496696 + Missense_Mutation SNP G C PR-07-4610 Unknown Somatic WGS Illumina GAIIx SH2D3C 10044 broad.mit.edu hg19 9 130504081 130504081 + Missense_Mutation SNP G C TCGA-CH-5740-01 Unknown Somatic WXS Illumina GAIIx CDK9 1025 CPCGene hg19 9 130551600 130551600 + Missense_Mutation SNP C T CPCG0410-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLC25A25 114789 broad.mit.edu hg19 9 130854176 130854176 + Missense_Mutation SNP A G TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx GOLGA2 2801 broad.mit.edu hg19 9 131020338 131020338 + Missense_Mutation SNP G C P08-716 Unknown Somatic WGS Illumina GAIIx TRUB2 26995 broad.mit.edu hg19 9 131071863 131071863 + Missense_Mutation SNP G C TCGA-QU-A6IM-01 Unknown Somatic WXS Illumina GAIIx SLC27A4 10999 broad.mit.edu hg19 9 131107632 131107632 + Missense_Mutation SNP C G TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx ODF2 4957 broad.mit.edu hg19 9 131231507 131231507 + Missense_Mutation SNP C T TCGA-ZG-A8QX-01 Unknown Somatic WXS Illumina GAIIx SPTAN1 6709 broad.mit.edu hg19 9 131370484 131370484 + Missense_Mutation SNP G C P04-2740-Tumor Unknown Somatic WXS Illumina GAIIx NUP188 23511 broad.mit.edu hg19 9 131711511 131711511 + Missense_Mutation SNP C G PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx NUP188 23511 broad.mit.edu hg19 9 131765100 131765100 + Missense_Mutation SNP C T TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx SH3GLB2 56904 broad.mit.edu hg19 9 131772101 131772101 + Missense_Mutation SNP T C TCGA-EJ-5494-01 Unknown Somatic WXS Illumina GAIIx CRAT 1384 CPCGene hg19 9 131870139 131870139 + Missense_Mutation SNP C A CPCG0199-F1 Unknown Somatic WXS Illumina HiSeq 2500 USP20 10868 CPCGene hg19 9 132630492 132630492 + Missense_Mutation SNP G C CPCG0248-F1 Unknown Somatic WXS Illumina HiSeq 2500 HMCN2 256158 broad.mit.edu hg19 9 133267411 133267411 + Missense_Mutation SNP G T PR-2621 Unknown Somatic WGS Illumina GAIIx EXOSC2 23404 CPCGene hg19 9 133569209 133569209 + Missense_Mutation SNP C G CPCG0365-F1 Unknown Somatic WXS Illumina HiSeq 2500 ABL1 25 broad.mit.edu hg19 9 133753877 133753877 + Missense_Mutation SNP A G TCGA-HC-7209-01 Unknown Somatic WXS Illumina GAIIx FIBCD1 84929 broad.mit.edu hg19 9 133780631 133780631 + Missense_Mutation SNP G A TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx FIBCD1 84929 broad.mit.edu hg19 9 133799131 133799131 + Missense_Mutation SNP C A TCGA-CH-5794-01 Unknown Somatic WXS Illumina GAIIx FIBCD1 84929 broad.mit.edu hg19 9 133799694 133799694 + Missense_Mutation SNP G A PR-03-3125 Unknown Somatic WGS Illumina GAIIx FIBCD1 84929 CPCGene hg19 9 133799727 133799727 + Missense_Mutation SNP G A CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 LAMC3 10319 CPCGene hg19 9 133901832 133901832 + Missense_Mutation SNP C A CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 LAMC3 10319 broad.mit.edu hg19 9 133952675 133952675 + Missense_Mutation SNP C T P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx LAMC3 10319 CPCGene hg19 9 133954654 133954654 + Missense_Mutation SNP C T CPCG0158-F1 Unknown Somatic WXS Illumina HiSeq 2500 POMT1 10585 broad.mit.edu hg19 9 134382807 134382807 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx RAPGEF1 2889 broad.mit.edu hg19 9 134497351 134497351 + Missense_Mutation SNP C T TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx NTNG2 84628 CPCGene hg19 9 135073479 135073479 + Missense_Mutation SNP C T CPCG0078-F1 Unknown Somatic WXS Illumina HiSeq 2500 C9 735 broad.mit.edu hg19 9 135374128 135374128 + Missense_Mutation SNP T C PR-04-1367-Tumor Unknown Somatic WXS Illumina GAIIx DDX31 64794 broad.mit.edu hg19 9 135487530 135487530 + Missense_Mutation SNP A G PR-09-3566-Tumor Unknown Somatic WXS Illumina GAIIx C9 735 broad.mit.edu hg19 9 135763824 135763824 + Missense_Mutation SNP C T PR-STID0000003127 Unknown Somatic WGS Illumina GAIIx TSC1 7248 broad.mit.edu hg19 9 135797314 135797314 + Missense_Mutation SNP G A PR-09-3421-Tumor Unknown Somatic WXS Illumina GAIIx ABO 28 CPCGene hg19 9 136135236 136135236 + Missense_Mutation SNP C T CPCG0352-F1 Unknown Somatic WXS Illumina HiSeq 2500 ADAMTS13 11093 broad.mit.edu hg19 9 136323143 136323143 + Missense_Mutation SNP C T TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx DBH 1621 broad.mit.edu hg19 9 136508616 136508616 + Missense_Mutation SNP G A TCGA-EJ-8470-01 Unknown Somatic WXS Illumina GAIIx DBH 1621 CPCGene hg19 9 136508639 136508639 + Missense_Mutation SNP C T CPCG0073-F1 Unknown Somatic WXS Illumina HiSeq 2500 VAV2 7410 broad.mit.edu hg19 9 136857224 136857224 + Missense_Mutation SNP G T TCGA-J4-A6M7-01 Unknown Somatic WXS Illumina GAIIx COL5A1 1289 broad.mit.edu hg19 9 137591886 137591886 + Missense_Mutation SNP G A PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx FCN1 2219 broad.mit.edu hg19 9 137802991 137802991 + Missense_Mutation SNP C T TCGA-XJ-A83G-01 Unknown Somatic WXS Illumina GAIIx OLFM1 10439 broad.mit.edu hg19 9 137987791 137987791 + Missense_Mutation SNP C A P04-1421-Tumor Unknown Somatic WXS Illumina GAIIx PPP1R26 9858 broad.mit.edu hg19 9 138379423 138379423 + Missense_Mutation SNP C A P05-2212-Tumor Unknown Somatic WXS Illumina GAIIx MRPS2 51116 CPCGene hg19 9 138395509 138395509 + Missense_Mutation SNP A T CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 LCN9 392399 broad.mit.edu hg19 9 138557738 138557738 + Missense_Mutation SNP G A TCGA-HC-7080-01 Unknown Somatic WXS Illumina GAIIx SOHLH1 402381 broad.mit.edu hg19 9 138588485 138588485 + Missense_Mutation SNP C A TCGA-EJ-7786-01 Unknown Somatic WXS Illumina GAIIx SOHLH1 402381 broad.mit.edu hg19 9 138591266 138591266 + Missense_Mutation SNP A G TCGA-XJ-A9DQ-01 Unknown Somatic WXS Illumina GAIIx UBAC1 10422 broad.mit.edu hg19 9 138837764 138837764 + Missense_Mutation SNP G C TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx NACC2 138151 broad.mit.edu hg19 9 138903746 138903746 + Missense_Mutation SNP C T P08-217 Unknown Somatic WGS Illumina GAIIx LHX3 8022 broad.mit.edu hg19 9 139089306 139089306 + Missense_Mutation SNP G A PR-2621 Unknown Somatic WGS Illumina GAIIx LHX3 8022 broad.mit.edu hg19 9 139090531 139090531 + Missense_Mutation SNP C T TCGA-EJ-5530-01 Unknown Somatic WXS Illumina GAIIx SNAPC4 6621 broad.mit.edu hg19 9 139272608 139272608 + Missense_Mutation SNP G A PR-06-1749 Unknown Somatic WGS Illumina GAIIx NOTCH1 4851 CPCGene hg19 9 139404394 139404394 + Missense_Mutation SNP G A CPCG0411-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMEM141 85014 CPCGene hg19 9 139686723 139686723 + Missense_Mutation SNP T A CPCG0249-F1 Unknown Somatic WXS Illumina HiSeq 2500 C9 735 CPCGene hg19 9 139740282 139740282 + Missense_Mutation SNP G A CPCG0380-F1 Unknown Somatic WXS Illumina HiSeq 2500 TRAF2 7186 broad.mit.edu hg19 9 139793320 139793320 + Missense_Mutation SNP G T TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx TRAF2 7186 broad.mit.edu hg19 9 139793321 139793321 + Missense_Mutation SNP G T TCGA-HC-7233-01 Unknown Somatic WGS Illumina GAIIx NPDC1 56654 broad.mit.edu hg19 9 139934287 139934287 + Missense_Mutation SNP C A P05-3859-Tumor Unknown Somatic WXS Illumina GAIIx NELFB 25920 broad.mit.edu hg19 9 140161398 140161398 + Missense_Mutation SNP G C TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx TOR4A 54863 broad.mit.edu hg19 9 140173720 140173720 + Missense_Mutation SNP C T P03-1426 Unknown Somatic WGS Illumina GAIIx EXD3 54932 broad.mit.edu hg19 9 140243660 140243660 + Missense_Mutation SNP C G TCGA-EJ-5542-01 Unknown Somatic WXS Illumina GAIIx DPH7 92715 EMBL hg19 9 140458999 140458999 + Missense_Mutation SNP G A EOPC-01 Unknown Somatic WGS Illumina HiSeq2000 CACNA1B 774 broad.mit.edu hg19 9 140809212 140809212 + Missense_Mutation SNP G A TCGA-QU-A6IL-01 Unknown Somatic WXS Illumina GAIIx MXRA5 25878 broad.mit.edu hg19 X 3227796 3227796 + Missense_Mutation SNP G A TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx MXRA5 25878 broad.mit.edu hg19 X 3235405 3235405 + Missense_Mutation SNP G C TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx MXRA5 25878 broad.mit.edu hg19 X 3240572 3240572 + Missense_Mutation SNP C T TCGA-YL-A8HO-01 Unknown Somatic WXS Illumina GAIIx MXRA5 25878 broad.mit.edu hg19 X 3241386 3241386 + Missense_Mutation SNP C T P07-5021 Unknown Somatic WGS Illumina GAIIx MXRA5 25878 CPCGene hg19 X 3242631 3242631 + Missense_Mutation SNP A C CPCG0095-F1 Unknown Somatic WXS Illumina HiSeq 2500 NLGN4X 57502 broad.mit.edu hg19 X 5810881 5810881 + Missense_Mutation SNP C T P09-1372-Tumor Unknown Somatic WXS Illumina GAIIx STS 412 broad.mit.edu hg19 X 7243388 7243388 + Missense_Mutation SNP G C P04-2599-Tumor Unknown Somatic WXS Illumina GAIIx LOC100288814 0 CPCGene hg19 X 9935751 9935751 + Missense_Mutation SNP G C CPCG0331-F1 Unknown Somatic WXS Illumina HiSeq 2500 WWC3 55841 broad.mit.edu hg19 X 10058810 10058810 + Splice_Site SNP G A TCGA-EJ-7327-01 Unknown Somatic WXS Illumina GAIIx CLCN4 1183 broad.mit.edu hg19 X 10176202 10176202 + Missense_Mutation SNP G A TCGA-EJ-7792-01 Unknown Somatic WXS Illumina GAIIx ARHGAP6 395 broad.mit.edu hg19 X 11204545 11204545 + Missense_Mutation SNP T C TCGA-EJ-5498-01 Unknown Somatic WXS Illumina GAIIx TLR7 51284 broad.mit.edu hg19 X 12904067 12904067 + Missense_Mutation SNP C T TCGA-HC-7230-01 Unknown Somatic WXS Illumina GAIIx GLRA2 2742 broad.mit.edu hg19 X 14708906 14708906 + Missense_Mutation SNP C T P07-5318 Unknown Somatic WGS Illumina GAIIx GLRA2 2742 broad.mit.edu hg19 X 14748515 14748515 + Missense_Mutation SNP C T TCGA-EJ-5504-01 Unknown Somatic WXS Illumina GAIIx FANCB 2187 broad.mit.edu hg19 X 14883152 14883152 + Missense_Mutation SNP C A TCGA-J4-A83I-01 Unknown Somatic WXS Illumina GAIIx PIGA 5277 broad.mit.edu hg19 X 15349616 15349616 + Missense_Mutation SNP C A P04-1790-Tumor Unknown Somatic WXS Illumina GAIIx ZRSR2 8233 broad.mit.edu hg19 X 15809137 15809137 + Splice_Site SNP G T TCGA-HI-7170-01 Unknown Somatic WXS Illumina GAIIx ZRSR2 8233 CPCGene hg19 X 15838394 15838394 + Missense_Mutation SNP C T CPCG0237-F1 Unknown Somatic WXS Illumina HiSeq 2500 CTPS2 56474 broad.mit.edu hg19 X 16707690 16707690 + Missense_Mutation SNP C A TCGA-YL-A8HO-01 Unknown Somatic WXS Illumina GAIIx TXLNG 55787 CPCGene hg19 X 16857969 16857969 + Missense_Mutation SNP A G CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 PPEF1 5475 broad.mit.edu hg19 X 18842131 18842131 + Missense_Mutation SNP A G TCGA-CH-5791-01 Unknown Somatic WXS Illumina GAIIx MAP7D2 256714 CPCGene hg19 X 20071034 20071034 + Missense_Mutation SNP G A CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 RPS6KA3 6197 CPCGene hg19 X 20206071 20206071 + Missense_Mutation SNP C T CPCG0388-F1 Unknown Somatic WXS Illumina HiSeq 2500 KLHL34 257240 CPCGene hg19 X 21674509 21674509 + Missense_Mutation SNP G A CPCG0122-F1 Unknown Somatic WXS Illumina HiSeq 2500 KLHL34 257240 broad.mit.edu hg19 X 21675394 21675394 + Missense_Mutation SNP G A P05-620 Unknown Somatic WGS Illumina GAIIx YY2 404281 broad.mit.edu hg19 X 21875524 21875524 + Missense_Mutation SNP G A TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx PTCHD1 139411 CPCGene hg19 X 23398261 23398261 + Missense_Mutation SNP T G CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 CX 0 broad.mit.edu hg19 X 23934359 23934359 + Missense_Mutation SNP T C TCGA-EJ-5511-01 Unknown Somatic WXS Illumina GAIIx ZFX 7543 broad.mit.edu hg19 X 24226448 24226448 + Missense_Mutation SNP A G PR-09-5446-Tumor Unknown Somatic WXS Illumina GAIIx SUPT20HL1 100130302 CPCGene hg19 X 24381948 24381948 + Missense_Mutation SNP G A CPCG0027-F1 Unknown Somatic WXS Illumina HiSeq 2500 POLA1 5422 broad.mit.edu hg19 X 24861702 24861702 + Missense_Mutation SNP A G TCGA-HC-8256-01 Unknown Somatic WXS Illumina GAIIx MAGEB18 286514 CPCGene hg19 X 26157580 26157580 + Missense_Mutation SNP C A CPCG0341-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAGEB10 139422 CPCGene hg19 X 27840404 27840404 + Missense_Mutation SNP C T CPCG0205-F1 Unknown Somatic WXS Illumina HiSeq 2500 IL1RAPL1 11141 broad.mit.edu hg19 X 29972719 29972719 + Missense_Mutation SNP C T TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx NR0B1 190 CPCGene hg19 X 30322876 30322876 + Missense_Mutation SNP G C CPCG0122-F1 Unknown Somatic WXS Illumina HiSeq 2500 GK 2710 broad.mit.edu hg19 X 30737631 30737631 + Missense_Mutation SNP G C TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx DMD 1756 broad.mit.edu hg19 X 31525439 31525439 + Missense_Mutation SNP G T P08-501 Unknown Somatic WGS Illumina GAIIx DMD 1756 broad.mit.edu hg19 X 31747756 31747756 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx DMD 1756 broad.mit.edu hg19 X 32536160 32536160 + Missense_Mutation SNP C T TCGA-G9-6348-01 Unknown Somatic WXS Illumina GAIIx DMD 1756 broad.mit.edu hg19 X 32827700 32827700 + Missense_Mutation SNP C G PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx FAM47A 158724 broad.mit.edu hg19 X 34149362 34149362 + Missense_Mutation SNP C T PR-02-254-Tumor Unknown Somatic WXS Illumina GAIIx FAM47A 158724 CPCGene hg19 X 34149570 34149570 + Missense_Mutation SNP C T CPCG0266-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAM47A 158724 broad.mit.edu hg19 X 34150170 34150170 + Missense_Mutation SNP A T TCGA-EJ-7321-01 Unknown Somatic WXS Illumina GAIIx FAM47A 158724 broad.mit.edu hg19 X 34150304 34150304 + Missense_Mutation SNP G A TCGA-EJ-7784-01 Unknown Somatic WXS Illumina GAIIx FAM47B 170062 broad.mit.edu hg19 X 34962549 34962549 + Missense_Mutation SNP C T TCGA-CH-5739-01 Unknown Somatic WXS Illumina GAIIx MAGEB16 139604 broad.mit.edu hg19 X 35821242 35821242 + Missense_Mutation SNP C T PR-01-2382-Tumor Unknown Somatic WXS Illumina GAIIx CX 0 CPCGene hg19 X 35990015 35990015 + Missense_Mutation SNP C A CPCG0185-F1 Unknown Somatic WXS Illumina HiSeq 2500 FAM47C 442444 broad.mit.edu hg19 X 37026709 37026709 + Missense_Mutation SNP T A PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx FAM47C 442444 broad.mit.edu hg19 X 37027375 37027375 + Missense_Mutation SNP C T TCGA-HC-A6HX-01 Unknown Somatic WXS Illumina GAIIx FAM47C 442444 broad.mit.edu hg19 X 37027524 37027524 + Missense_Mutation SNP C T P05-3436-Tumor Unknown Somatic WXS Illumina GAIIx FAM47C 442444 broad.mit.edu hg19 X 37027785 37027785 + Missense_Mutation SNP C T TCGA-EJ-5510-01 Unknown Somatic WXS Illumina GAIIx FTH1P18 441490 CPCGene hg19 X 37061450 37061450 + Missense_Mutation SNP G A CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 SRPX 8406 broad.mit.edu hg19 X 38016273 38016273 + Missense_Mutation SNP A T TCGA-EJ-7789-01 Unknown Somatic WXS Illumina GAIIx TSPAN7 7102 broad.mit.edu hg19 X 38540490 38540490 + Missense_Mutation SNP G C TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx ATP6AP2 10159 broad.mit.edu hg19 X 40457949 40457949 + Missense_Mutation SNP T C TCGA-H9-7775-01 Unknown Somatic WXS Illumina GAIIx MED14 9282 broad.mit.edu hg19 X 40526049 40526049 + Missense_Mutation SNP G A P07-4941 Unknown Somatic WGS Illumina GAIIx MED14 9282 broad.mit.edu hg19 X 40572273 40572273 + Missense_Mutation SNP C T TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx USP9X 8239 broad.mit.edu hg19 X 40999970 40999970 + Missense_Mutation SNP A G TCGA-HC-8257-01 Unknown Somatic WXS Illumina GAIIx USP9X 8239 broad.mit.edu hg19 X 41000651 41000651 + Missense_Mutation SNP G A TCGA-EJ-5517-01 Unknown Somatic WXS Illumina GAIIx USP9X 8239 CPCGene hg19 X 41045842 41045842 + Missense_Mutation SNP G T CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 USP9X 8239 CPCGene hg19 X 41073897 41073897 + Missense_Mutation SNP C T CPCG0099-F1 Unknown Somatic WXS Illumina HiSeq 2500 EFHC2 80258 broad.mit.edu hg19 X 44171919 44171919 + Missense_Mutation SNP T C TCGA-G9-6369-01 Unknown Somatic WXS Illumina GAIIx KDM6A 7403 CPCGene hg19 X 44950053 44950053 + Missense_Mutation SNP C G CPCG0238-F1 Unknown Somatic WXS Illumina HiSeq 2500 KDM6A 7403 broad.mit.edu hg19 X 44969495 44969495 + Splice_Site SNP G A TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx RBM10 8241 broad.mit.edu hg19 X 47044719 47044719 + Missense_Mutation SNP C A P07-5021 Unknown Somatic WGS Illumina GAIIx ARAF 369 broad.mit.edu hg19 X 47422704 47422704 + Missense_Mutation SNP G A P08-217 Unknown Somatic WGS Illumina GAIIx SYN1 6853 broad.mit.edu hg19 X 47478981 47478981 + Missense_Mutation SNP G A PR-04-1243 Unknown Somatic WGS Illumina GAIIx SSX5 6758 broad.mit.edu hg19 X 48054234 48054234 + Missense_Mutation SNP G A TCGA-EJ-7785-01 Unknown Somatic WXS Illumina GAIIx SSX5 6758 CPCGene hg19 X 48054541 48054541 + Missense_Mutation SNP G A CPCG0358-F1 Unknown Somatic WXS Illumina HiSeq 2500 TBC1D25 4943 broad.mit.edu hg19 X 48418149 48418149 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx WAS 7454 CPCGene hg19 X 48547760 48547760 + Missense_Mutation SNP G C CPCG0196-F1 Unknown Somatic WXS Illumina HiSeq 2500 KCND1 3750 broad.mit.edu hg19 X 48825739 48825739 + Missense_Mutation SNP T C PR-04-3222-Tumor Unknown Somatic WXS Illumina GAIIx CCDC120 90060 broad.mit.edu hg19 X 48921462 48921462 + Missense_Mutation SNP G A P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx GPKOW 27238 broad.mit.edu hg19 X 48973489 48973489 + Missense_Mutation SNP G A TCGA-EJ-7331-01 Unknown Somatic WXS Illumina GAIIx USP27X 389856 broad.mit.edu hg19 X 49646207 49646207 + Missense_Mutation SNP A T PR-STID0000003127 Unknown Somatic WGS Illumina GAIIx CCNB3 85417 CPCGene hg19 X 50053823 50053823 + Missense_Mutation SNP G A CPCG0020-F1 Unknown Somatic WXS Illumina HiSeq 2500 SHROOM4 57477 broad.mit.edu hg19 X 50339867 50339867 + Missense_Mutation SNP C T PR-09-2517-Tumor Unknown Somatic WXS Illumina GAIIx SHROOM4 57477 broad.mit.edu hg19 X 50376383 50376383 + Missense_Mutation SNP A G TCGA-G9-6354-01 Unknown Somatic WXS Illumina GAIIx SHROOM4 57477 CPCGene hg19 X 50376816 50376816 + Missense_Mutation SNP C A CPCG0057-F1 Unknown Somatic WXS Illumina HiSeq 2500 SHROOM4 57477 CPCGene hg19 X 50376817 50376817 + Missense_Mutation SNP C A CPCG0057-F1 Unknown Somatic WXS Illumina HiSeq 2500 SHROOM4 57477 CPCGene hg19 X 50378665 50378665 + Missense_Mutation SNP G A CPCG0094-F1 Unknown Somatic WXS Illumina HiSeq 2500 CX 0 broad.mit.edu hg19 X 51150821 51150821 + Missense_Mutation SNP C T TCGA-EJ-5494-01 Unknown Somatic WXS Illumina GAIIx SMC1A 8243 CPCGene hg19 X 53441727 53441727 + Missense_Mutation SNP G A CPCG0212-F1 Unknown Somatic WXS Illumina HiSeq 2500 HUWE1 10075 broad.mit.edu hg19 X 53563401 53563401 + Missense_Mutation SNP C T TCGA-VN-A88O-01 Unknown Somatic WXS Illumina GAIIx HUWE1 10075 broad.mit.edu hg19 X 53564575 53564575 + Missense_Mutation SNP A C PR-2525 Unknown Somatic WGS Illumina GAIIx HUWE1 10075 broad.mit.edu hg19 X 53571559 53571559 + Missense_Mutation SNP C T P04-2740-Tumor Unknown Somatic WXS Illumina GAIIx HUWE1 10075 CPCGene hg19 X 53610811 53610811 + Missense_Mutation SNP C A CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 FGD1 2245 CPCGene hg19 X 54496483 54496483 + Missense_Mutation SNP G T CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 ITIH6 347365 EMBL hg19 X 54777568 54777568 + Missense_Mutation SNP G A EOPC-10 Unknown Somatic WGS Illumina HiSeq2000 ITIH6 347365 CPCGene hg19 X 54777797 54777797 + Missense_Mutation SNP C T CPCG0241-F1 Unknown Somatic WXS Illumina HiSeq 2500 ITIH6 347365 broad.mit.edu hg19 X 54783701 54783701 + Missense_Mutation SNP G T TCGA-2A-A8VL-01 Unknown Somatic WXS Illumina GAIIx PFKFB1 5207 broad.mit.edu hg19 X 54989709 54989709 + Missense_Mutation SNP C T TCGA-HC-7736-01 Unknown Somatic WXS Illumina GAIIx APEX2 27301 broad.mit.edu hg19 X 55026932 55026932 + Missense_Mutation SNP A G PR-09-2744-Tumor Unknown Somatic WXS Illumina GAIIx RRAGB 10325 broad.mit.edu hg19 X 55782293 55782293 + Missense_Mutation SNP G A P06-1125-Tumor Unknown Somatic WXS Illumina GAIIx FAAH2 158584 broad.mit.edu hg19 X 57458438 57458438 + Missense_Mutation SNP G A TCGA-H9-A6BY-01 Unknown Somatic WXS Illumina GAIIx ARHGEF9 23229 CPCGene hg19 X 62885769 62885769 + Missense_Mutation SNP C T CPCG0242-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZC3H12B 340554 CPCGene hg19 X 64708686 64708686 + Missense_Mutation SNP C T CPCG0336-F1 Unknown Somatic WXS Illumina HiSeq 2500 MSN 4478 broad.mit.edu hg19 X 64949442 64949442 + Missense_Mutation SNP A C TCGA-EJ-7314-01 Unknown Somatic WXS Illumina GAIIx HEPH 9843 EMBL hg19 X 65483506 65483506 + Missense_Mutation SNP G A EOPC-06 Unknown Somatic WGS Illumina HiSeq2000 AR 367 broad.mit.edu hg19 X 66905872 66905872 + Missense_Mutation SNP G A TCGA-FC-A8O0-01 Unknown Somatic WXS Illumina GAIIx AR 367 broad.mit.edu hg19 X 66905906 66905906 + Missense_Mutation SNP G A TCGA-VP-A875-01 Unknown Somatic WXS Illumina GAIIx STARD8 9754 broad.mit.edu hg19 X 67937307 67937307 + Missense_Mutation SNP G A TCGA-EJ-7781-01 Unknown Somatic WXS Illumina GAIIx PJA1 64219 CPCGene hg19 X 68381960 68381960 + Missense_Mutation SNP A G CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 MED12 9968 broad.mit.edu hg19 X 70344951 70344951 + Missense_Mutation SNP C A PR-00-160-Tumor Unknown Somatic WXS Illumina GAIIx MED12 9968 broad.mit.edu hg19 X 70348523 70348523 + Missense_Mutation SNP G C TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx MED12 9968 CPCGene hg19 X 70349247 70349247 + Missense_Mutation SNP T A CPCG0269-F1 Unknown Somatic WXS Illumina HiSeq 2500 MED12 9968 broad.mit.edu hg19 X 70349255 70349255 + Missense_Mutation SNP G C TCGA-VP-A87J-01 Unknown Somatic WXS Illumina GAIIx MED12 9968 broad.mit.edu hg19 X 70349255 70349255 + Missense_Mutation SNP G C TCGA-G9-7519-01 Unknown Somatic WXS Illumina GAIIx MED12 9968 CPCGene hg19 X 70349258 70349258 + Missense_Mutation SNP C T CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 MED12 9968 broad.mit.edu hg19 X 70349258 70349258 + Missense_Mutation SNP C T TCGA-CH-5748-01 Unknown Somatic WXS Illumina GAIIx MED12 9968 broad.mit.edu hg19 X 70349258 70349258 + Missense_Mutation SNP C T TCGA-EJ-5510-01 Unknown Somatic WXS Illumina GAIIx MED12 9968 broad.mit.edu hg19 X 70349258 70349258 + Missense_Mutation SNP C T PR-3026-Tumor Unknown Somatic WXS Illumina GAIIx MED12 9968 CPCGene hg19 X 70349258 70349258 + Missense_Mutation SNP C T CPCG0217-F1 Unknown Somatic WXS Illumina HiSeq 2500 MED12 9968 broad.mit.edu hg19 X 70349258 70349258 + Missense_Mutation SNP C T PR-3035-Tumor Unknown Somatic WXS Illumina GAIIx ZMYM3 9203 broad.mit.edu hg19 X 70460815 70460815 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx ZMYM3 9203 broad.mit.edu hg19 X 70461110 70461110 + Missense_Mutation SNP G C TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx ZMYM3 9203 broad.mit.edu hg19 X 70461111 70461111 + Missense_Mutation SNP G T TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx ZMYM3 9203 broad.mit.edu hg19 X 70466227 70466227 + Missense_Mutation SNP T C PR-01-2554-Tumor Unknown Somatic WXS Illumina GAIIx ZMYM3 9203 CPCGene hg19 X 70470322 70470322 + Missense_Mutation SNP T A CPCG0154-F1 Unknown Somatic WXS Illumina HiSeq 2500 ACRC 0 broad.mit.edu hg19 X 70828895 70828895 + Missense_Mutation SNP T A TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx RGAG4 340526 broad.mit.edu hg19 X 71351091 71351091 + Missense_Mutation SNP C T TCGA-HC-8261-01 Unknown Somatic WXS Illumina GAIIx ZCCHC13 389874 CPCGene hg19 X 73524330 73524330 + Missense_Mutation SNP G A CPCG0046-F1 Unknown Somatic WXS Illumina HiSeq 2500 KIAA2022 340533 broad.mit.edu hg19 X 73962951 73962951 + Missense_Mutation SNP G A PR-02-1736-Tumor Unknown Somatic WXS Illumina GAIIx ABCB7 22 broad.mit.edu hg19 X 74318818 74318818 + Missense_Mutation SNP C A TCGA-CH-5737-01 Unknown Somatic WXS Illumina GAIIx ATRX 546 broad.mit.edu hg19 X 76891438 76891438 + Missense_Mutation SNP A G TCGA-G9-6496-01 Unknown Somatic WXS Illumina GAIIx ATRX 546 CPCGene hg19 X 76937141 76937141 + Missense_Mutation SNP A G CPCG0366-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATP7A 538 CPCGene hg19 X 77289300 77289300 + Missense_Mutation SNP T G CPCG0232-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZCCHC5 203430 CPCGene hg19 X 77913689 77913689 + Missense_Mutation SNP G C CPCG0410-F1 Unknown Somatic WXS Illumina HiSeq 2500 BRWD3 254065 CPCGene hg19 X 79975050 79975050 + Missense_Mutation SNP C G CPCG0357-F1 Unknown Somatic WXS Illumina HiSeq 2500 POF1B 79983 broad.mit.edu hg19 X 84561266 84561266 + Missense_Mutation SNP G T TCGA-CH-5738-01 Unknown Somatic WXS Illumina GAIIx CHM 1121 broad.mit.edu hg19 X 85212902 85212902 + Missense_Mutation SNP T C TCGA-J4-A83J-01 Unknown Somatic WXS Illumina GAIIx DACH2 117154 broad.mit.edu hg19 X 86068206 86068206 + Missense_Mutation SNP G A TCGA-HC-7075-01 Unknown Somatic WGS Illumina GAIIx PABPC5 140886 CPCGene hg19 X 90690973 90690973 + Missense_Mutation SNP C A CPCG0063-F1 Unknown Somatic WXS Illumina HiSeq 2500 PCDH11X 27328 broad.mit.edu hg19 X 91090586 91090586 + Missense_Mutation SNP A T TCGA-XJ-A83G-01 Unknown Somatic WXS Illumina GAIIx NAP1L3 4675 CPCGene hg19 X 92928037 92928037 + Missense_Mutation SNP C T CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 NAP1L3 4675 broad.mit.edu hg19 X 92928053 92928053 + Missense_Mutation SNP G A PR-04-1243 Unknown Somatic WGS Illumina GAIIx PCDH19 57526 broad.mit.edu hg19 X 99662943 99662943 + Missense_Mutation SNP C T TCGA-EJ-7318-01 Unknown Somatic WXS Illumina GAIIx SYTL4 94121 CPCGene hg19 X 99943414 99943414 + Missense_Mutation SNP A C CPCG0350-F1 Unknown Somatic WXS Illumina HiSeq 2500 BTK 695 CPCGene hg19 X 100604886 100604886 + Missense_Mutation SNP T C CPCG0236-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZMAT1 84460 broad.mit.edu hg19 X 101139640 101139640 + Missense_Mutation SNP A G P05-2594-Tumor Unknown Somatic WXS Illumina GAIIx TCEAL6 158931 broad.mit.edu hg19 X 101395981 101395981 + Missense_Mutation SNP C T TCGA-CH-5748-01 Unknown Somatic WXS Illumina GAIIx ESX1 80712 CPCGene hg19 X 103499142 103499142 + Missense_Mutation SNP C T CPCG0128-F1 Unknown Somatic WXS Illumina HiSeq 2500 IL1RAPL2 26280 broad.mit.edu hg19 X 104984612 104984612 + Missense_Mutation SNP C A TCGA-VN-A88N-01 Unknown Somatic WXS Illumina GAIIx IL1RAPL2 26280 broad.mit.edu hg19 X 104999297 104999297 + Missense_Mutation SNP G T TCGA-G9-6339-01 Unknown Somatic WXS Illumina GAIIx NRK 203447 broad.mit.edu hg19 X 105153579 105153579 + Missense_Mutation SNP G A TCGA-EJ-7314-01 Unknown Somatic WXS Illumina GAIIx TBC1D8B 54885 broad.mit.edu hg19 X 106064139 106064139 + Missense_Mutation SNP G T TCGA-EJ-5499-01 Unknown Somatic WXS Illumina GAIIx MORC4 79710 broad.mit.edu hg19 X 106184845 106184845 + Missense_Mutation SNP G T P03-1426 Unknown Somatic WGS Illumina GAIIx RBM41 55285 broad.mit.edu hg19 X 106312568 106312568 + Missense_Mutation SNP C T TCGA-HC-7212-01 Unknown Somatic WXS Illumina GAIIx RBM41 55285 broad.mit.edu hg19 X 106358623 106358623 + Missense_Mutation SNP C A TCGA-HC-A6AQ-01 Unknown Somatic WXS Illumina GAIIx PIH1D3 139212 CPCGene hg19 X 106462183 106462183 + Missense_Mutation SNP G A CPCG0040-F1 Unknown Somatic WXS Illumina HiSeq 2500 COL4A5 1287 broad.mit.edu hg19 X 107920734 107920734 + Missense_Mutation SNP A G PR-04-3347-Tumor Unknown Somatic WXS Illumina GAIIx IRS4 8471 CPCGene hg19 X 107978384 107978384 + Missense_Mutation SNP C T CPCG0369-F1 Unknown Somatic WXS Illumina HiSeq 2500 IRS4 8471 broad.mit.edu hg19 X 107979274 107979274 + Missense_Mutation SNP C T P03-2345 Unknown Somatic WGS Illumina GAIIx RGAG1 57529 broad.mit.edu hg19 X 109697536 109697536 + Missense_Mutation SNP G T PR-02-1899-Tumor Unknown Somatic WXS Illumina GAIIx CAPN6 827 broad.mit.edu hg19 X 110491912 110491912 + Missense_Mutation SNP A G PR-3042 Unknown Somatic WGS Illumina GAIIx CAPN6 827 CPCGene hg19 X 110494821 110494821 + Missense_Mutation SNP T C CPCG0255-F1 Unknown Somatic WXS Illumina HiSeq 2500 TRPC5 7224 CPCGene hg19 X 111195369 111195369 + Missense_Mutation SNP C T CPCG0083-F1 Unknown Somatic WXS Illumina HiSeq 2500 ZCCHC16 340595 broad.mit.edu hg19 X 111698033 111698033 + Missense_Mutation SNP G A TCGA-G9-6351-01 Unknown Somatic WXS Illumina GAIIx HTR2C 3358 broad.mit.edu hg19 X 113965800 113965800 + Missense_Mutation SNP C T TCGA-HC-7745-01 Unknown Somatic WXS Illumina GAIIx HTR2C 3358 CPCGene hg19 X 114082717 114082717 + Missense_Mutation SNP G A CPCG0121-F1 Unknown Somatic WXS Illumina HiSeq 2500 LUZP4 51213 broad.mit.edu hg19 X 114541233 114541233 + Missense_Mutation SNP C T TCGA-G9-6361-01 Unknown Somatic WXS Illumina GAIIx DOCK11 139818 broad.mit.edu hg19 X 117722260 117722260 + Missense_Mutation SNP C T PR-1024-Tumor Unknown Somatic WXS Illumina GAIIx ZCCHC12 170261 broad.mit.edu hg19 X 117959282 117959282 + Missense_Mutation SNP G A TCGA-EJ-5510-01 Unknown Somatic WXS Illumina GAIIx ZCCHC12 170261 broad.mit.edu hg19 X 117959418 117959418 + Missense_Mutation SNP G A PR-02-2072-Tumor Unknown Somatic WXS Illumina GAIIx GRIA3 2892 CPCGene hg19 X 122616767 122616767 + Missense_Mutation SNP G C CPCG0117-F1 Unknown Somatic WXS Illumina HiSeq 2500 STAG2 10735 CPCGene hg19 X 123227889 123227889 + Missense_Mutation SNP G A CPCG0190-F1 Unknown Somatic WXS Illumina HiSeq 2500 TENM1 10178 broad.mit.edu hg19 X 123839059 123839059 + Missense_Mutation SNP G A TCGA-EJ-7314-01 Unknown Somatic WXS Illumina GAIIx DCAF12L2 340578 broad.mit.edu hg19 X 125298898 125298898 + Missense_Mutation SNP C T TCGA-HI-7169-01 Unknown Somatic WGS Illumina GAIIx DCAF12L2 340578 CPCGene hg19 X 125298898 125298898 + Missense_Mutation SNP C T CPCG0251-F1 Unknown Somatic WXS Illumina HiSeq 2500 DCAF12L1 139170 broad.mit.edu hg19 X 125685920 125685920 + Missense_Mutation SNP C T TCGA-HC-7231-01 Unknown Somatic WXS Illumina GAIIx AIFM1 9131 CPCGene hg19 X 129290490 129290490 + Missense_Mutation SNP T G CPCG0348-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPR119 139760 broad.mit.edu hg19 X 129518743 129518743 + Missense_Mutation SNP C G TCGA-HC-7210-01 Unknown Somatic WXS Illumina GAIIx ARHGAP36 158763 broad.mit.edu hg19 X 130220378 130220378 + Missense_Mutation SNP C T TCGA-G9-6384-01 Unknown Somatic WXS Illumina GAIIx ARHGAP36 158763 CPCGene hg19 X 130222631 130222631 + Missense_Mutation SNP G A CPCG0081-F1 Unknown Somatic WXS Illumina HiSeq 2500 IGSF1 3547 broad.mit.edu hg19 X 130419246 130419246 + Missense_Mutation SNP C A TCGA-2A-A8VO-01 Unknown Somatic WXS Illumina GAIIx OR13H1 347468 broad.mit.edu hg19 X 130678204 130678204 + Missense_Mutation SNP C T TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx MST4 0 broad.mit.edu hg19 X 131188793 131188793 + Missense_Mutation SNP A G TCGA-EJ-7786-01 Unknown Somatic WXS Illumina GAIIx FRMD7 90167 broad.mit.edu hg19 X 131212858 131212858 + Missense_Mutation SNP G T TCGA-FC-7708-01 Unknown Somatic WXS Illumina GAIIx MBNL3 55796 broad.mit.edu hg19 X 131524910 131524910 + Missense_Mutation SNP G A PR-STID0000002872 Unknown Somatic WGS Illumina GAIIx FAM127A 8933 broad.mit.edu hg19 X 134166693 134166693 + Missense_Mutation SNP T A TCGA-EJ-5517-01 Unknown Somatic WXS Illumina GAIIx FHL1 2273 broad.mit.edu hg19 X 135290740 135290740 + Missense_Mutation SNP G A TCGA-J4-A67N-01 Unknown Somatic WXS Illumina GAIIx FHL1 2273 broad.mit.edu hg19 X 135292056 135292056 + Missense_Mutation SNP G T P04-594-Tumor Unknown Somatic WXS Illumina GAIIx MAP7D3 79649 broad.mit.edu hg19 X 135314095 135314095 + Missense_Mutation SNP C A TCGA-YL-A8HO-01 Unknown Somatic WXS Illumina GAIIx GPR112 0 broad.mit.edu hg19 X 135405107 135405107 + Missense_Mutation SNP G A TCGA-G9-6342-01 Unknown Somatic WXS Illumina GAIIx GPR112 0 broad.mit.edu hg19 X 135426968 135426968 + Missense_Mutation SNP C A TCGA-HC-7738-01 Unknown Somatic WXS Illumina GAIIx GPR112 0 broad.mit.edu hg19 X 135428548 135428548 + Missense_Mutation SNP A G TCGA-HC-A6AL-01 Unknown Somatic WXS Illumina GAIIx BRS3 680 broad.mit.edu hg19 X 135572582 135572582 + Missense_Mutation SNP G A TCGA-G9-6351-01 Unknown Somatic WXS Illumina GAIIx CD40LG 959 broad.mit.edu hg19 X 135730414 135730414 + Missense_Mutation SNP G A TCGA-M7-A725-01 Unknown Somatic WXS Illumina GAIIx ARHGEF6 9459 CPCGene hg19 X 135861639 135861639 + Missense_Mutation SNP T C CPCG0090-F1 Unknown Somatic WXS Illumina HiSeq 2500 ATP11C 286410 CPCGene hg19 X 138886690 138886690 + Missense_Mutation SNP G A CPCG0345-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAGEC3 139081 broad.mit.edu hg19 X 140983190 140983190 + Missense_Mutation SNP C A TCGA-EJ-7788-01 Unknown Somatic WXS Illumina GAIIx MAGEC1 9947 CPCGene hg19 X 140994142 140994142 + Missense_Mutation SNP C A CPCG0372-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAGEC1 9947 CPCGene hg19 X 140994997 140994997 + Missense_Mutation SNP G A CPCG0006-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAGEC1 9947 CPCGene hg19 X 140996387 140996387 + Missense_Mutation SNP G A CPCG0340-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAGEC2 51438 broad.mit.edu hg19 X 141290779 141290779 + Missense_Mutation SNP C T P03-1906-Tumor Unknown Somatic WXS Illumina GAIIx SLITRK4 139065 broad.mit.edu hg19 X 142718314 142718314 + Missense_Mutation SNP C G TCGA-HC-7749-01 Unknown Somatic WXS Illumina GAIIx UBE2NL 389898 broad.mit.edu hg19 X 142967263 142967263 + Missense_Mutation SNP C G P09-649-Tumor Unknown Somatic WXS Illumina GAIIx SLITRK2 84631 CPCGene hg19 X 144904063 144904063 + Missense_Mutation SNP C T CPCG0342-F1 Unknown Somatic WXS Illumina HiSeq 2500 SLITRK2 84631 broad.mit.edu hg19 X 144904717 144904717 + Missense_Mutation SNP C A P07-144 Unknown Somatic WGS Illumina GAIIx AFF2 2334 broad.mit.edu hg19 X 148037365 148037365 + Missense_Mutation SNP G A TCGA-EJ-5530-01 Unknown Somatic WXS Illumina GAIIx AFF2 2334 broad.mit.edu hg19 X 148069054 148069054 + Missense_Mutation SNP G T TCGA-HC-A6HY-01 Unknown Somatic WXS Illumina GAIIx MAMLD1 10046 broad.mit.edu hg19 X 149639452 149639452 + Missense_Mutation SNP C G TCGA-VP-A87E-01 Unknown Somatic WXS Illumina GAIIx MAMLD1 10046 broad.mit.edu hg19 X 149671652 149671652 + Missense_Mutation SNP G A TCGA-EJ-5516-01 Unknown Somatic WXS Illumina GAIIx MAMLD1 10046 broad.mit.edu hg19 X 149671777 149671777 + Missense_Mutation SNP C T PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx GPR50 9248 CPCGene hg19 X 150349723 150349723 + Missense_Mutation SNP C T CPCG0210-F1 Unknown Somatic WXS Illumina HiSeq 2500 GPR50 9248 broad.mit.edu hg19 X 150349723 150349723 + Missense_Mutation SNP C T TCGA-VN-A88L-01 Unknown Somatic WXS Illumina GAIIx PASD1 139135 broad.mit.edu hg19 X 150832695 150832695 + Missense_Mutation SNP C G TCGA-EJ-7328-01 Unknown Somatic WXS Illumina GAIIx GABRE 2564 broad.mit.edu hg19 X 151124292 151124292 + Missense_Mutation SNP C G TCGA-EJ-7781-01 Unknown Somatic WXS Illumina GAIIx GABRE 2564 broad.mit.edu hg19 X 151138818 151138818 + Missense_Mutation SNP T C TCGA-G9-6362-01 Unknown Somatic WXS Illumina GAIIx MAGEA10 4109 broad.mit.edu hg19 X 151303216 151303216 + Missense_Mutation SNP G A TCGA-XA-A8JR-01 Unknown Somatic WXS Illumina GAIIx MAGEA10 4109 broad.mit.edu hg19 X 151303553 151303553 + Missense_Mutation SNP G A PR-00-1165-Tumor Unknown Somatic WXS Illumina GAIIx MAGEA10 4109 broad.mit.edu hg19 X 151303720 151303720 + Missense_Mutation SNP C G PR-STID0000003127 Unknown Somatic WGS Illumina GAIIx GABRQ 55879 CPCGene hg19 X 151820140 151820140 + Missense_Mutation SNP T C CPCG0190-F1 Unknown Somatic WXS Illumina HiSeq 2500 MAGEA12 4111 broad.mit.edu hg19 X 151900633 151900633 + Missense_Mutation SNP G A TCGA-G9-6378-01 Unknown Somatic WXS Illumina GAIIx HAUS7 55559 broad.mit.edu hg19 X 152721052 152721052 + Missense_Mutation SNP G A P03-1334-Tumor Unknown Somatic WXS Illumina GAIIx DUSP9 1852 broad.mit.edu hg19 X 152915668 152915668 + Missense_Mutation SNP G A PR-03-022-Tumor Unknown Somatic WXS Illumina GAIIx SLC6A8 6535 broad.mit.edu hg19 X 152956939 152956939 + Missense_Mutation SNP A G P07-4941 Unknown Somatic WGS Illumina GAIIx PLXNB3 5365 broad.mit.edu hg19 X 153039436 153039436 + Missense_Mutation SNP C T TCGA-EJ-7115-01 Unknown Somatic WXS Illumina GAIIx SRPK3 26576 broad.mit.edu hg19 X 153047017 153047017 + Missense_Mutation SNP G A P07-5318 Unknown Somatic WGS Illumina GAIIx PDZD4 57595 broad.mit.edu hg19 X 153073955 153073955 + Missense_Mutation SNP G A TCGA-G9-6342-01 Unknown Somatic WXS Illumina GAIIx L1CAM 3897 broad.mit.edu hg19 X 153135593 153135593 + Missense_Mutation SNP G A TCGA-EJ-7314-01 Unknown Somatic WXS Illumina GAIIx L1CAM 3897 broad.mit.edu hg19 X 153136389 153136389 + Missense_Mutation SNP G A TCGA-J4-A67O-01 Unknown Somatic WXS Illumina GAIIx L1CAM 3897 broad.mit.edu hg19 X 153138078 153138078 + Missense_Mutation SNP T G P02-1562-Tumor Unknown Somatic WXS Illumina GAIIx ARHGAP4 393 broad.mit.edu hg19 X 153187219 153187219 + Missense_Mutation SNP C A TCGA-HC-7752-01 Unknown Somatic WXS Illumina GAIIx HCFC1 3054 CPCGene hg19 X 153222869 153222869 + Missense_Mutation SNP A G CPCG0210-F1 Unknown Somatic WXS Illumina HiSeq 2500 HCFC1 3054 CPCGene hg19 X 153227754 153227754 + Missense_Mutation SNP G A CPCG0182-F1 Unknown Somatic WXS Illumina HiSeq 2500 TMEM187 8269 broad.mit.edu hg19 X 153248194 153248194 + Missense_Mutation SNP C G P04-1421-Tumor Unknown Somatic WXS Illumina GAIIx IRAK1 3654 broad.mit.edu hg19 X 153278063 153278063 + Missense_Mutation SNP C T TCGA-HC-7742-01 Unknown Somatic WXS Illumina GAIIx TKTL1 8277 broad.mit.edu hg19 X 153539362 153539362 + Missense_Mutation SNP C T PR-09-2744-Tumor Unknown Somatic WXS Illumina GAIIx CTAG2 30848 broad.mit.edu hg19 X 153881613 153881613 + Missense_Mutation SNP G A TCGA-EJ-7315-01 Unknown Somatic WXS Illumina GAIIx GAB3 139716 EMBL hg19 X 153944498 153944498 + Missense_Mutation SNP A G EOPC-11 Unknown Somatic WGS Illumina HiSeq2000 MPP1 4354 broad.mit.edu hg19 X 154011735 154011735 + Missense_Mutation SNP G T PR-STID0000002682 Unknown Somatic WGS Illumina GAIIx VBP1 7411 CPCGene hg19 X 154448461 154448461 + Missense_Mutation SNP A G CPCG0183-F1 Unknown Somatic WXS Illumina HiSeq 2500 DDX3Y 8653 broad.mit.edu hg19 Y 15023867 15023867 + Missense_Mutation SNP G T TCGA-YL-A8HO-01 Unknown Somatic WXS Illumina GAIIx RPS4Y2 140032 CPCGene hg19 Y 22921761 22921761 + Missense_Mutation SNP G A CPCG0210-F1 Unknown Somatic WXS Illumina HiSeq 2500