Class picard.sam.CreateSequenceDictionaryTest

all > picard.sam > CreateSequenceDictionaryTest
2

tests
0

failures
0

ignored
0.049s

duration
100%

successful

Tests

Test Duration Result
testBasic 0.027s passed
testNonUniqueSequenceName 0.022s passed

Standard error

[Tue Aug 16 04:11:37 CDT 2016] picard.sam.CreateSequenceDictionary REFERENCE=testdata/picard/sam/basic.fasta OUTPUT=/tmp/CreateSequenceDictionaryTest.6415789778785589830.dict TRUNCATE_NAMES_AT_WHITESPACE=false    NUM_SEQUENCES=2147483647 VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=1000 CREATE_INDEX=false CREATE_MD5_FILE=false GA4GH_CLIENT_SECRETS=client_secrets.json
[Tue Aug 16 04:11:37 CDT 2016] Executing as jli@corona on Linux 3.19.0-61-generic amd64; Java HotSpot(TM) 64-Bit Server VM 1.8.0_91-b14; Picard version: null
[Tue Aug 16 04:11:37 CDT 2016] picard.sam.CreateSequenceDictionary done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1823997952
[Tue Aug 16 04:11:37 CDT 2016] picard.sam.CreateSequenceDictionary REFERENCE=testdata/picard/sam/duplicate_sequence_names.fasta OUTPUT=/tmp/CreateSequenceDictionaryTest.4574388205287661401.dict TRUNCATE_NAMES_AT_WHITESPACE=true    NUM_SEQUENCES=2147483647 VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=1000 CREATE_INDEX=false CREATE_MD5_FILE=false GA4GH_CLIENT_SECRETS=client_secrets.json
[Tue Aug 16 04:11:37 CDT 2016] Executing as jli@corona on Linux 3.19.0-61-generic amd64; Java HotSpot(TM) 64-Bit Server VM 1.8.0_91-b14; Picard version: null
[Tue Aug 16 04:11:37 CDT 2016] picard.sam.CreateSequenceDictionary done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1823997952
To get help, see http://broadinstitute.github.io/picard/index.html#GettingHelp