Class picard.illumina.CollectIlluminaBasecallingMetricsTest

all > picard.illumina > CollectIlluminaBasecallingMetricsTest
2

tests
0

failures
0

ignored
0.112s

duration
100%

successful

Tests

Test Duration Result
testIndexedRunLane1 0.074s passed
testNonIndexedRunLane1 0.038s passed

Standard error

[Tue Aug 16 04:11:23 CDT 2016] picard.illumina.CollectIlluminaBasecallingMetrics BASECALLS_DIR=/tmp/cibm.2172382981057919394.tmp/25T8B25T/Data/Intensities/BaseCalls LANE=1 INPUT=/tmp/cibm.2172382981057919394.tmp/25T8B25T/Data/Intensities/BaseCalls/barcodeData.1 READ_STRUCTURE=25T8B25T OUTPUT=/tmp/cibm.8181246704957978871.metrics    VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=1000 CREATE_INDEX=false CREATE_MD5_FILE=false GA4GH_CLIENT_SECRETS=client_secrets.json
[Tue Aug 16 04:11:23 CDT 2016] Executing as jli@corona on Linux 3.19.0-61-generic amd64; Java HotSpot(TM) 64-Bit Server VM 1.8.0_91-b14; Picard version: null
[Tue Aug 16 04:11:23 CDT 2016] picard.illumina.CollectIlluminaBasecallingMetrics done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1829765120
[Tue Aug 16 04:11:23 CDT 2016] picard.illumina.CollectIlluminaBasecallingMetrics BASECALLS_DIR=/tmp/cibm.2172382981057919394.tmp/125T125T/Data/Intensities/BaseCalls LANE=1 READ_STRUCTURE=125T125T OUTPUT=/tmp/cibm.3773526083439284343.metrics    VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=1000 CREATE_INDEX=false CREATE_MD5_FILE=false GA4GH_CLIENT_SECRETS=client_secrets.json
[Tue Aug 16 04:11:23 CDT 2016] Executing as jli@corona on Linux 3.19.0-61-generic amd64; Java HotSpot(TM) 64-Bit Server VM 1.8.0_91-b14; Picard version: null
[Tue Aug 16 04:11:23 CDT 2016] picard.illumina.CollectIlluminaBasecallingMetrics done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1829765120