
NWc        5   @@  s$  d  d l  m Z d  d l Z d  d l Z d  d l Z d  d l Z e j d  d d f k  p d d  f e j d  k o d d f k  n r e j j d e	 e j d    e j
 d  n  y d  d l m Z Wn e k
 r e Z n Xd d	 l m Z d d
 l m Z d d l m Z m Z d d l m Z m Z m Z m Z d d l m Z d d l m Z d d l m Z d d l m Z e j Z e j  d  Z! d  Z" d e# f d     YZ$ d e# f d     YZ% d   Z& d   Z' e( e( d  Z) d e# f d     YZ* d e# f d     YZ+ d e# f d     YZ, d e- f d      YZ. e( d!  Z/ d"   Z0 e( e( d#  Z  d$   Z1 d  d%  Z2 e- d& d  d' d  d( d d) d  d* e( d+ e( d, e( d- d  d. d  d/ d0 d1 e( d2 d  d3 d  d4 i  d5 i  d6 e3 d7 e3 d8 e4 d9 e4 d: d d; e3 d< e3 d= e( d> e( d? e( d@ e(  Z5 d S(A   i    (   t   absolute_importNi   i   i   s8   Sorry, Cython requires Python 2.6+ or 3.2+, found %d.%d
i   (   t
   basestring(   t   Errors(   t   EncodedString(   t   PyrexScannert   FileSourceDescriptor(   t
   PyrexErrort   CompileErrort   errort   warning(   t   ModuleScope(   t   Utils(   t   Options(   t   Versions2   [A-Za-z_][A-Za-z0-9_]*(\.[A-Za-z_][A-Za-z0-9_]*)*$t   CompilationDatac           B@  s   e  Z RS(    (   t   __name__t
   __module__(    (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR   )   s   t   Contextc           B@  s
  e  Z d Z e d  d e d  Z d   Z d d  Z d   Z	 d   Z
 d   Z d d d e d  Z e d	  Z d
   Z d   Z e e d  Z d   Z d   Z d   Z d   Z d   Z d   Z d   Z d   Z d   Z d   Z d   Z d   Z d   Z RS(   i   c   
      C@  s   d d l  m } m } i | j d 6|  _ | j |   |  _ |  j |  j d <| |  _ t   |  _	 | |  _
 | |  _ | |  _ i  |  _ i  |  _ t j j t j j t j j t j j t  t j j d    }	 | |	 g |  _ |  j |  d  |  _ d  S(   Ni   (   t   Builtint   CythonScopet   __builtin__t   cythont   Includes(   t    R   R   t   builtin_scopet   modulest   create_cython_scopet   cython_scopet   include_directoriest   sett   future_directivest   compiler_directivest   cppt   optionst   pxdst	   _internedt   ost   patht   abspatht   normpatht   joint   dirnamet   __file__t   pardirt   set_language_levelt   Nonet   gdb_debug_outputwriter(
   t   selfR   R   R    t   language_levelR!   t   create_testscopeR   R   t   standard_include_path(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   __init__E   s     						0c         C@  sn   | |  _  | d k rj d d l m } m } m } m } |  j j | | | | g  |  j d |  j d <n  d  S(   Ni   i   (   t   print_functiont   unicode_literalsR    t   divisionR   t   builtins(	   R0   t   FutureR4   R5   R    R6   R   t   updateR   (   R/   t   levelR4   R5   R    R6   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR,   `   s
    	"c         C@  sa   t  | | f } y |  j | SWn t k
 r1 n Xt  |  } | rP | | _ n  | |  j | <| S(   N(   R   R#   t   KeyErrort   encoding(   R/   t   valueR<   t   key(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   intern_ustringg   s    c         G@  sJ   t  |  | f | } y |  j | SWn t k
 r8 n X| |  j | <| S(   N(   t   typeR#   R;   (   R/   R=   R>   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   intern_values   s    c   	      C@  s   d d l  m } t | t  r | j d k r t | | t j    } t | |  j	  } | j
 |  |  } | j | |  } n' | j |  | |  } | j | |  } | S(   Ni   (   t   Pipelinet   pyx(   R   RB   t
   isinstanceR   t
   _file_typet   CompilationSourceR$   t   getcwdt   create_default_resultobjR!   t   create_pyx_as_pxd_pipelinet   run_pipelinet   create_pxd_pipeline(	   R/   t   source_desct   scopet   module_nameRB   t   sourcet   result_sinkt   pipelinet   result(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   process_pxd~   s    c         C@  s   t  j |  S(   N(   R   t   report_error(   R/   t   exc(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   nonfatal_error   s    i   c         C@  s  d } | r$ d | | | | f GHn  d  } d  } | rf | rN | j |  }	 ql | j }	 | } d  } n | }	 t j |	  s t | p | d d f d |   n  | r | r d GHn  | j |  } | s |  j |	 |  } | r | j |  } q q n  | sN| rd GHn  | r| }	 n  |  } x) |	 j	 d  D] }
 | j |
  } q2Wn  | r`d | GHn  | j
 s| rwd GHn  | s| rd	 GHn  |  j |	 | d
 | } | rd | GHn  | r| rt | _
 |  j |	 d |  } | r| j d  rqt | d |	 j d t j   qn  | rt | _
 y | rBd | GHn  | j d t j  t j j |  d } | j |  s| } n  t | |  } |  j | | |	  \ } } | r|  n  | \ } } | | f |  j | <Wqt k
 rqXqn  | S(   Ni    sP   Context.find_module: module_name = %s, relative_to = %s, pos = %s, need_pxd = %ss   '%s' is not a valid module names   ...trying relative imports   ...trying absolute importt   .s   ...scope = %ss   ...pxd not loadeds   ...looking for pxd filet   sys_paths   ......found %ss   .pys   __init__.pys   '%s.pxd' not founds   Context.find_module: Parsing %si   (   R-   t   qualify_namet   qualified_namet   module_name_patternt   matchR   t   lookup_submodulet   find_pxd_filet   find_submodulet   splitt   pxd_file_loadedt   Truet   search_include_directoriest   endswithR   t   replaceR$   t   sepR%   t   splitextR   RS   R"   (   R/   RN   t   relative_tot   post   need_pxdt   absolute_fallbackt   debug_find_moduleRM   t   pxd_pathnameRZ   t   namet   package_pathnamet   rel_pathRL   t   errRR   t   pxd_codenodest	   pxd_scope(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   find_module   s    						&	)		
c         C@  s  |  j  | d | d | } | d  k rZ| j d  sB | d k rZt j j t j j t j j t j j t	  t j j
 d    } t j j | d  } |  j j |  z |  j  | d |  } Wd  |  j j   X| rW| } | j d  rt | d	 | d
  qT| d k r.t | d | | f d
  qT| d k rTt | d | d
  qTqWqZn  | d  k rt j r|  j | |  S| S(   Ns   .pxdRX   t   pythont   stdlibt   stdiot   stlR   t
   Deprecateds!   '%s' is deprecated, use 'cpython'i   s!   '%s' is deprecated, use 'libc.%s's$   '%s' is deprecated, use 'libcpp.*.*'(   s   stdlibRw   Rx   (   s   stdlibRw   (   Rc   R-   t
   startswithR$   R%   R&   R'   R(   R)   R*   R+   R   t   appendt   popR	   R   t   cimport_from_pyxt   find_pyx_file(   R/   RZ   Ri   RX   t   pxdR2   t   deprecated_include_pathRn   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR^      s,    	0 c         C@  s   |  j  | d |  S(   Ns   .pyx(   Rc   (   R/   RZ   Ri   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR~     s    c         C@  s9   |  j  | d | d t } | s5 t | d |  n  | S(   NR   t   includes   '%s' not found(   Rc   Rb   R   (   R/   t   filenameRi   R%   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   find_include_file  s
    	c         C@  s%   t  j t |  j  | | | | |  S(   N(   R   Rc   t   tupleR   (   R/   RZ   t   suffixRi   R   RX   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyRc     s    c         C@  s   t  j |  S(   N(   R   t   find_root_package_dir(   R/   t	   file_path(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR     s    c         C@  s   t  j | t |   S(   N(   R   t   check_package_dirR   (   R/   t   dirt   package_names(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR     s    c   	      C@  s  t  j j |  s d St j |  } t j | |  r; d S| g } t j | d  } t  j j |  r~ t j | |  r~ d Sx~ |  j |  D]m \ } } | d k r |  j | |  } n$ | d k r |  j	 | |  } n q | r t j | |  r d Sq Wd S(   Ni   s   .pxdt   cimportR   i    (
   R$   R%   t   existsR   t   modification_timet   file_newer_thant   replace_suffixt   read_dependency_fileR^   Rc   (	   R/   t   source_patht   output_patht   c_timeRi   t   pxd_patht   kindRn   t   dep_path(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   c_file_out_of_date   s$    	$c         C@  s2   g  |  j  |  D] \ } } | d k r | ^ q S(   NR   (   R   (   R/   R   R   Rn   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   find_cimported_module_names5  s    c         C@  s   t  j |  S(   N(   R   t   is_package_dir(   R/   t   dir_path(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR   9  s    c         C@  s   t  j | d  } t j j |  r t | d  } g  | j   D]0 } d | j   k r@ | j   j d d  ^ q@ } | j	   | Sd Sd  S(   Ns   .dept   rUt    i   (    (
   R   R   R$   R%   R   t   opent	   readlinest   stripR`   t   close(   R/   R   R   t   ft   linet   chunks(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR   <  s    0
c         C@  s   |  j  j | d   S(   N(   R   t   getR-   (   R/   Rn   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR]   H  s    c         C@  sA   |  j  |  } | s= t | d d  d |  } | |  j | <n  | S(   Nt   parent_modulet   context(   R]   R
   R-   R   (   R/   Rn   RM   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR_   L  s    	c         C@  s8  t  | t  s t d   n  | j } |  j | _ t j } y t j |   } d d l	 m
 } t | | d | j d | d |  }	 | j |	 | |  }
 |  j j r y d d l m } Wn t k
 r t d	   n X| j |  n  Wd  QXWn% t k
 r} |  j | |   n Xt j | k r4t    n  |
 S(
   Ns$   Only file sources for code supportedi   (   t   Parsingt   source_encodingRM   R   i   (   t   ConcreteSyntaxTreesL   Formal grammer can only be used with compiled Cython with an available pgen.(   RD   R   t   RuntimeErrorR   R    R   t
   num_errorsR   t   open_source_fileR   R   R   R<   t   p_moduleR!   t   formal_grammart   ParserR   t   ImportErrort   UnicodeDecodeErrort   _report_decode_errorR   (   R/   RL   RM   R   t   full_module_namet   source_filenameR   R   R   t   st   treeR   t   e(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   parseU  s.    		c      	   C@  s   | j  d } | j  d } | j  d } d } d } } t j | j d d d d d	 _ }	 xU t |	 d  D]D \ } }
 | t |
  7} | | k rk | | t |
  d } Pqk qk WWd  QXt | | | f d
 | | f  S(   Nii   i    i   t   rR<   s	   iso8859-1t   newlineR   sq   Decoding error, missing or incorrect coding=<encoding-name> at top of source (cannot decode with encoding %r: %s)(   t   argst   ioR   R   t	   enumeratet   lenR   (   R/   RL   RU   t   msgt   positionR<   R   t   columnt   idxR   t   data(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR   r  s    
$c   
      C@  s   t  j j |  \ } } t  j j |  \ } } d | k r@ | S| g } xN |  j |  r t  j j |  \ } }	 | | k r Pn  | j |	  | } qL W| j   d j |  S(   NRW   (   R$   R%   R`   Rg   R   R{   t   reverseR(   (
   R/   R%   R!   R   R   RN   t   _t   namest   parentt   package_name(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   extract_module_name  s    	

c         C@  sU   t  j   | j r2 t j | j d  } | _ n d  } t  j d | d | j	  d  S(   Ns   .lisR%   t   echo_to_stderr(
   R   t   resett   use_listing_fileR   R   t   main_source_filet   listing_fileR-   t   open_listing_filet   errors_to_stderr(   R/   R!   RR   R%   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   setup_errors  s    
	c         C@  s   | j  j } t | t  s* t d   n  t j   t j | _ | j d k rX t } n  | r | j	 r y# t
 j | j	 t j | j   Wn t k
 r n Xd  | _	 n  d  S(   Ns$   Only file sources for code supportedi    (   t   compilation_sourceRL   RD   R   R   R   t   close_listing_fileR   Rb   t   c_fileR   t   castrate_fileR$   t   statR   t   EnvironmentErrorR-   (   R/   Rq   R!   RR   RL   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   teardown_errors  s    
	#N(   R   R   R-   R   t   FalseRb   R3   R,   R?   RA   RS   RV   Rt   R^   R~   R   Rc   R   R   R   R   R   R   R]   R_   R   R   R   R   R   (    (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR   7   s6   					X!		
														c         C@  s   | j  r d } n d } t j |  |  } | j r t j j | | j  } t j j |  r| t j j | t j j |   S| Sn | Sd  S(   Ns   .cpps   .c(	   t   cplusR   R   t   output_fileR$   R%   R(   t   isdirt   basename(   R   t   cwdR!   t   c_suffixt   suggested_file_namet   out_path(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   get_output_filename  s    			c         C@  sU   t    } |  j j | _ |  | _ |  j } t | j |  j |  | _ | j | _ | S(   N(	   t   CompilationResultRL   R   R   R   R   R   R   t   embedded_metadata(   R   R!   RR   RL   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyRH     s    				c         C@  s  d d l  m } t j j |   d } | j | d  | d  k rR | j   } n  t j   } t j j	 |   } | p | j
 |  |  } | j r | j d t j  | } | j |  s |  } q n | } t | |  }	 t |	 | |  }  t |  |  }
 | j d  k rt j j |
 j  d d } t j j |  rt j | d d d . } | j   } | j d	  r{t | _ n  Wd  QXqn  | j   d
 k s| r| j | | |
  } n | j | | |
  } | j | |
  | j | |   \ } } | j | | |
  |
 S(   Ni   (   RB   RW   i    s   .htmlR   R<   s   UTF-8u   <!-- Generated by Cythons   .py(    R   RB   R$   R%   Rg   t   configure_language_defaultsR-   t   create_contextRG   R&   R   t'   relative_path_in_code_position_commentsRe   Rf   Rd   R   RF   RH   t   annotateR   R   R   R   t   readlineRz   Rb   t   lowert   create_py_pipelinet   create_pyx_pipelineR   RJ   R   (   RO   R!   R   R   RB   t
   source_extR   t   abs_pathRp   RL   RR   t   html_filenamet	   html_fileR   RQ   Rq   t   enddata(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyRJ     s<    	RF   c           B@  s   e  Z d  Z d   Z RS(   sk   
    Contains the data necesarry to start up a compilation pipeline for
    a single compilation unit.
    c         C@  s   | |  _  | |  _ | |  _ d  S(   N(   RL   R   R   (   R/   RL   R   R   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR3     s    		(   R   R   t   __doc__R3   (    (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyRF     s   t   CompilationOptionsc           B@  s,   e  Z d  Z d d  Z d   Z d   Z RS(   sr  
    Options to the Cython compiler:

    show_version      boolean   Display version number
    use_listing_file  boolean   Generate a .lis file
    errors_to_stderr  boolean   Echo errors to stderr when using .lis
    include_path      [string]  Directories to search for include files
    output_file       string    Name of generated .c file
    generate_pxi      boolean   Generate .pxi file for public declarations
    capi_reexport_cincludes
                      boolean   Add cincluded headers to any auto-generated
                                header files.
    timestamps        boolean   Only compile changed source files.
    verbose           boolean   Always print source names being compiled
    compiler_directives  dict   Overrides for pragma options (see Options.py)
    embedded_metadata    dict   Metadata to embed in the C file as json.
    evaluate_tree_assertions boolean  Test support: evaluate parse tree assertions
    language_level    integer   The Python language level: 2 or 3
    formal_grammar    boolean  Parse the file with the formal grammar

    cplus             boolean   Compile as c++ code
    c         K@  s  g  |  _  | r- t | t  r3 | j } q3 n t } t |  } | j |  t |  t t  } | j d g  | r d t	 |  d k r d n d d j
 |  f } d d  l } | j |  n  t | d  } | | d <d	 | k rd	 | k rt | d	  | d	 <n  d
 | k r7d
 | k r7| d
 | d
 <n  d | k r| d t k rlt j j d  | d <q| d t d  f k r| d =qn  |  j j |  d  S(   Nt   include_paths3   got unknown compilation option%s, please remove: %si   R   R   s   , i    R   R0   R   t   caches
   ~/.cycache(   R   RD   R   t   __dict__t   default_optionst   dictR9   R   t   difference_updateR   R(   t   warningst   warnt   intRb   R$   R%   t
   expanduserR   R-   (   R/   t   defaultst   kwR!   t   unknown_optionst   messageR   t
   directives(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR3     s6    	
c         C@  s;   | d k r7 |  j  j d  d  k r7 t |  j  d <q7 n  d  S(   Nt   pyt   binding(   R   R   R-   Rb   (   R/   t   source_extension(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR   B  s    c         C@  s%   t  |  j |  j |  j |  j d |  S(   NR!   (   R   R   R   R   R0   (   R/   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR   G  s    N(   R   R   R   R-   R3   R   R   (    (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR     s   &	R   c           B@  s   e  Z d  Z d   Z RS(   sf  
    Results from the Cython compiler:

    c_file           string or None   The generated C source file
    h_file           string or None   The generated C header file
    i_file           string or None   The generated .pxi file
    api_file         string or None   The generated C API .h file
    listing_file     string or None   File of error messages
    object_file      string or None   Result of compiling the C file
    extension_file   string or None   Result of linking the object file
    num_errors       integer          Number of compilation errors
    compilation_source CompilationSource
    c         C@  sL   d  |  _ d  |  _ d  |  _ d  |  _ d  |  _ d  |  _ d  |  _ d  |  _ d  S(   N(	   R-   R   t   h_filet   i_filet   api_fileR   t   object_filet   extension_fileR   (   R/   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR3   [  s    							(   R   R   R   R3   (    (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR   L  s   t   CompilationResultSetc           B@  s   e  Z d  Z d Z d   Z RS(   s   
    Results from compiling multiple Pyrex source files. A mapping
    from source file paths to CompilationResult instances. Also
    has the following attributes:

    num_errors   integer   Total number of compilation errors
    i    c         C@  s    | |  | <|  j  | j  7_  d  S(   N(   R   (   R/   RO   RR   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   addq  s    
(   R   R   R   R   R  (    (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR  f  s   c         C@  s   t  |  | |  S(   s   
    compile_single(source, options, full_module_name)

    Compile the given Pyrex implementation file and return a CompilationResult.
    Always compiles a single file; does not perform timestamp checking or
    recursion.
    (   RJ   (   RO   R!   R   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   compile_singlev  s    c         C@  s#  g  |  D] } t  j j |  ^ q }  t   } t   } | j } | j } d } t  j   } x |  D] } | | k rb | d k r | j	   } n  t
 | | |  }	 | j | |	  }
 | s |
 r| r t j j d |  n  t | | d | } | j | |  d } n  | j |  qb qb W| S(   s   
    compile_multiple(sources, options)

    Compiles the given sequence of Pyrex implementation files and returns
    a CompilationResultSet. Performs timestamp checking and/or recursion
    if these are specified in the options.
    s   Compiling %s
R   N(   R$   R%   R&   R   R  t
   timestampst   verboseR-   RG   R   R   R   t   syst   stderrt   writeRJ   R  (   t   sourcesR!   RO   t	   processedt   resultsR  R  R   R   t   output_filenamet   out_of_dateRR   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   compile_multiple  s*    
%					c         K@  sL   t  d | |  } t |  t  r; | j r; t |  | |  St |  |  Sd S(   s  
    compile(source [, options], [, <option> = <value>]...)

    Compile one or more Pyrex implementation files, with optional timestamp
    checking and recursing on dependecies. The source argument may be a string
    or a sequence of strings If it is a string and no recursion or timestamp
    checking is requested, a CompilationResult is returned, otherwise a
    CompilationResultSet is returned.
    R   N(   R   RD   R   R  R  R  (   RO   R!   R   t   kwds(    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   compile  s    
c           C@  s   t  d d  S(   Nt   command_linei   (   t   main(    (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   setuptools_main  s    c         C@  s  t  j d } d } |  r> d d l m } | |  \ } } n t t  } | } | j rp t  j j d t	  n  | j
 d k r t j | j
  n  y+ t | |  } | j d k r d } n  Wn9 t t f k
 r } t  j j t |  d  d } n X| rt  j d  n  d  S(   Ni   i    (   t   parse_command_lines   Cython version %s
R   s   
(   R  t   argvt   CmdLineR  R   R   t   show_versionR  R  t   versiont   working_pathR$   t   chdirR  R   R   R   t   strt   exit(   R  R   t   any_failuresR  R!   R  RR   R   (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyR    s(    	
R!  R   R   R   R   R   t   annotate_coverage_xmlt   generate_pxit   capi_reexport_cincludesR#  R   R  R  t   quietR   R   t   evaluate_tree_assertionst   emit_linenumsR   t   c_line_in_tracebackR0   R   t	   gdb_debugt   compile_time_envt   common_utility_include_dirt
   output_dirt	   build_dir(6   t
   __future__R    R$   t   reR  R   t   version_infoR  R  R   R&  R   R   R   R%  R   R   t   StringEncodingR   t   ScanningR   R   R   R   R   R	   t   SymtabR
   R   R   R   R"  R  R[   R  t   objectR   R   R   RH   R-   RJ   RF   R   R   R   R  R  R  R  R  R   Rb   R   (    (    (    s7   /bar/jli/Chip-seq/script/cython/Cython/Compiler/Main.pyt   <module>   s   H!
"	 w		
4
H	#	 